{"pageNumber":"1033","pageRowStart":"25800","pageSize":"25","recordCount":184715,"records":[{"id":70178218,"text":"70178218 - 2017 - Detection limits of quantitative and digital PCR assays and their influence in presence-absence surveys of environmental DNA","interactions":[],"lastModifiedDate":"2017-02-24T10:51:24","indexId":"70178218","displayToPublicDate":"2016-11-07T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2776,"text":"Molecular Ecology Resources","active":true,"publicationSubtype":{"id":10}},"title":"Detection limits of quantitative and digital PCR assays and their influence in presence-absence surveys of environmental DNA","docAbstract":"<p><span>A set of universal guidelines is needed to determine the limit of detection (LOD) in PCR-based analyses of low concentration DNA. In particular, environmental DNA (eDNA) studies require sensitive and reliable methods to detect rare and cryptic species through shed genetic material in environmental samples. Current strategies for assessing detection limits of eDNA are either too stringent or subjective, possibly resulting in biased estimates of species’ presence. Here, a conservative LOD analysis grounded in analytical chemistry is proposed to correct for overestimated DNA concentrations predominantly caused by the concentration plateau, a nonlinear relationship between expected and measured DNA concentrations. We have used statistical criteria to establish formal mathematical models for both quantitative and droplet digital PCR. To assess the method, a new Grass Carp (</span><i>Ctenopharyngodon idella</i><span>) TaqMan assay was developed and tested on both PCR platforms using eDNA in water samples. The LOD adjustment reduced Grass Carp occupancy and detection estimates while increasing uncertainty – indicating that caution needs to be applied to eDNA data without LOD correction. Compared to quantitative PCR, digital PCR had higher occurrence estimates due to increased sensitivity and dilution of inhibitors at low concentrations. Without accurate LOD correction, species occurrence and detection probabilities based on eDNA estimates are prone to a source of bias that cannot be reduced by an increase in sample size or PCR replicates. Other applications also could benefit from a standardized LOD such as GMO food analysis, and forensic and clinical diagnostics.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/1755-0998.12619","usgsCitation":"Hunter, M., Dorazio, R.M., Butterfield, J.S., Meigs-Friend, G., Nico, L., and Ferrante, J.A., 2017, Detection limits of quantitative and digital PCR assays and their influence in presence-absence surveys of environmental DNA: Molecular Ecology Resources, v. 17, no. 2, p. 221-229, https://doi.org/10.1111/1755-0998.12619.","productDescription":"9 p.","startPage":"221","endPage":"229","ipdsId":"IP-074405","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":330858,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"17","issue":"2","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationDate":"2016-11-20","publicationStatus":"PW","scienceBaseUri":"5821a0dce4b02f1a881de968","chorus":{"doi":"10.1111/1755-0998.12619","url":"http://dx.doi.org/10.1111/1755-0998.12619","publisher":"Wiley-Blackwell","authors":"Hunter Margaret E., Dorazio Robert M., Butterfield John S. S., Meigs-Friend Gaia, Nico Leo G., Ferrante Jason A.","journalName":"Molecular Ecology Resources","publicationDate":"11/20/2016","auditedOn":"12/19/2016","publiclyAccessibleDate":"11/20/2016"},"contributors":{"authors":[{"text":"Hunter, Margaret 0000-0002-4760-9302 mhunter@usgs.gov","orcid":"https://orcid.org/0000-0002-4760-9302","contributorId":140627,"corporation":false,"usgs":true,"family":"Hunter","given":"Margaret","email":"mhunter@usgs.gov","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":653305,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dorazio, Robert M. 0000-0003-2663-0468 bob_dorazio@usgs.gov","orcid":"https://orcid.org/0000-0003-2663-0468","contributorId":1668,"corporation":false,"usgs":true,"family":"Dorazio","given":"Robert","email":"bob_dorazio@usgs.gov","middleInitial":"M.","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":false,"id":653306,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Butterfield, John S. jbutterfield@usgs.gov","contributorId":5593,"corporation":false,"usgs":true,"family":"Butterfield","given":"John","email":"jbutterfield@usgs.gov","middleInitial":"S.","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":653307,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Meigs-Friend, Gaia 0000-0001-5181-7510 gmeigs-friend@usgs.gov","orcid":"https://orcid.org/0000-0001-5181-7510","contributorId":4688,"corporation":false,"usgs":true,"family":"Meigs-Friend","given":"Gaia","email":"gmeigs-friend@usgs.gov","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":653308,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Nico, Leo 0000-0002-4488-7737 lnico@usgs.gov","orcid":"https://orcid.org/0000-0002-4488-7737","contributorId":138599,"corporation":false,"usgs":true,"family":"Nico","given":"Leo","email":"lnico@usgs.gov","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":653309,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Ferrante, Jason A. 0000-0003-3453-4636 jferrante@usgs.gov","orcid":"https://orcid.org/0000-0003-3453-4636","contributorId":176726,"corporation":false,"usgs":true,"family":"Ferrante","given":"Jason","email":"jferrante@usgs.gov","middleInitial":"A.","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":653310,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70178063,"text":"70178063 - 2017 - Combining citizen science species distribution models and stable isotopes reveals migratory connectivity in the secretive Virginia rail","interactions":[],"lastModifiedDate":"2017-03-22T15:00:13","indexId":"70178063","displayToPublicDate":"2016-11-01T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2163,"text":"Journal of Applied Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Combining citizen science species distribution models and stable isotopes reveals migratory connectivity in the secretive Virginia rail","docAbstract":"<ol id=\"jpe12723-list-0001\" class=\"o-list--numbered o-list--paragraph\"><li>Stable hydrogen isotope (δD) methods for tracking animal movement are widely used yet often produce low resolution assignments. Incorporating prior knowledge of abundance, distribution or movement patterns can ameliorate this limitation, but data are lacking for most species. We demonstrate how observations reported by citizen scientists can be used to develop robust estimates of species distributions and to constrain δD assignments.</li><li>We developed a Bayesian framework to refine isotopic estimates of migrant animal origins conditional on species distribution models constructed from citizen scientist observations. To illustrate this approach, we analysed the migratory connectivity of the Virginia rail <i>Rallus limicola</i>, a secretive and declining migratory game bird in North America.</li><li>Citizen science observations enabled both estimation of sampling bias and construction of bias-corrected species distribution models. Conditioning δD assignments on these species distribution models yielded comparably high-resolution assignments.</li><li>Most Virginia rails wintering across five Gulf Coast sites spent the previous summer near the Great Lakes, although a considerable minority originated from the Chesapeake Bay watershed or Prairie Pothole region of North Dakota. Conversely, the majority of migrating Virginia rails from a site in the Great Lakes most likely spent the previous winter on the Gulf Coast between Texas and Louisiana.</li><li><i>Synthesis and applications</i>. In this analysis, Virginia rail migratory connectivity does not fully correspond to the administrative flyways used to manage migratory birds. This example demonstrates that with the increasing availability of citizen science data to create species distribution models, our framework can produce high-resolution estimates of migratory connectivity for many animals, including cryptic species. Empirical evidence of links between seasonal habitats will help enable effective habitat management, hunting quotas and population monitoring and also highlight critical knowledge gaps.</li></ol>","language":"English","publisher":"British Ecological Society","doi":"10.1111/1365-2664.12723","usgsCitation":"Fournier, A., Sullivan, A.R., Bump, J.K., Perkins, M., Shieldcastle, M.C., and King, S.L., 2017, Combining citizen science species distribution models and stable isotopes reveals migratory connectivity in the secretive Virginia rail: Journal of Applied Ecology, v. 54, no. 2, p. 618-627, https://doi.org/10.1111/1365-2664.12723.","productDescription":"10 p.","startPage":"618","endPage":"627","ipdsId":"IP-064836","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":470208,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/1365-2664.12723","text":"Publisher Index Page"},{"id":330642,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"54","issue":"2","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2016-07-13","publicationStatus":"PW","scienceBaseUri":"5819a9c0e4b0bb36a4c90fff","contributors":{"authors":[{"text":"Fournier, Auriel M. V.","contributorId":176535,"corporation":false,"usgs":false,"family":"Fournier","given":"Auriel M. V.","affiliations":[],"preferred":false,"id":652704,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sullivan, Alexis R.","contributorId":176536,"corporation":false,"usgs":false,"family":"Sullivan","given":"Alexis","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":652705,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bump, Joseph K.","contributorId":176538,"corporation":false,"usgs":false,"family":"Bump","given":"Joseph","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":652706,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Perkins, Marie","contributorId":22957,"corporation":false,"usgs":false,"family":"Perkins","given":"Marie","email":"","affiliations":[],"preferred":false,"id":685742,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Shieldcastle, Mark C.","contributorId":189699,"corporation":false,"usgs":false,"family":"Shieldcastle","given":"Mark","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":685743,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"King, Sammy L. 0000-0002-5364-6361 sking@usgs.gov","orcid":"https://orcid.org/0000-0002-5364-6361","contributorId":557,"corporation":false,"usgs":true,"family":"King","given":"Sammy","email":"sking@usgs.gov","middleInitial":"L.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":652689,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70178045,"text":"70178045 - 2017 - How will predicted land-use change affect waterfowl spring stopover ecology? Inferences from an individual-based model","interactions":[],"lastModifiedDate":"2017-05-15T17:19:32","indexId":"70178045","displayToPublicDate":"2016-11-01T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2163,"text":"Journal of Applied Ecology","active":true,"publicationSubtype":{"id":10}},"title":"How will predicted land-use change affect waterfowl spring stopover ecology? Inferences from an individual-based model","docAbstract":"<ol id=\"jpe12788-list-0001\" class=\"o-list--numbered o-list--paragraph\"><li>Habitat loss, habitat fragmentation, overexploitation and climate change pose familiar and new challenges to conserving natural populations throughout the world. One approach conservation planners may use to evaluate the effects of these challenges on wildlife populations is scenario planning.</li><li>We developed an individual-based model to evaluate the effects of future land use and land cover changes on spring-migrating dabbling ducks in North America. We assessed the effects of three Intergovernmental Panel&nbsp;on Climate Change emission scenarios (A1B, A2 and B1) on dabbling duck stopover duration, movement distances and mortality. We specifically focused on migration stopover duration because previous research has demonstrated that individuals arriving earlier on the nesting grounds exhibit increased reproductive fitness.</li><li>Compared to present conditions, all three scenarios increased stopover duration and movement distances of agent ducks.</li><li>Although all three scenarios presented migrating ducks with increased amounts of wetland habitat, scenarios also contained substantially less cropland, which decreased overall carrying capacity of the study area.</li><li><i>Synthesis and applications</i>. Land-use change may increase waterfowl spring migration stopover duration in the midcontinent region of North America due to reduced landscape energetic carrying capacity. Climate change will alter spatial patterns of crop distributions with corn and rice production areas shifting to different regions. Thus, conservation planners will have to address population-level energetic implications of shifting agricultural food resources and increased uncertainty in yearly precipitation patterns within the next 50&nbsp;years.</li></ol>","language":"English","publisher":"British Ecological Society","doi":"10.1111/1365-2664.12788","usgsCitation":"Beatty, W.S., Kesler, D.C., Webb, E.B., Naylor, L.W., Raedeke, A.H., Humburg, D.D., Coluccy, J.M., and Soulliere, G.J., 2017, How will predicted land-use change affect waterfowl spring stopover ecology? Inferences from an individual-based model: Journal of Applied Ecology, v. 54, no. 3, p. 926-934, https://doi.org/10.1111/1365-2664.12788.","productDescription":"9 p.","startPage":"926","endPage":"934","ipdsId":"IP-066514","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":470209,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/1365-2664.12788","text":"Publisher Index Page"},{"id":330603,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"54","issue":"3","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-11","publicationStatus":"PW","scienceBaseUri":"5819a9c1e4b0bb36a4c91003","contributors":{"authors":[{"text":"Beatty, William S. 0000-0003-0013-3113 wbeatty@usgs.gov","orcid":"https://orcid.org/0000-0003-0013-3113","contributorId":173946,"corporation":false,"usgs":true,"family":"Beatty","given":"William","email":"wbeatty@usgs.gov","middleInitial":"S.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":652611,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kesler, Dylan C.","contributorId":14358,"corporation":false,"usgs":false,"family":"Kesler","given":"Dylan","email":"","middleInitial":"C.","affiliations":[{"id":6769,"text":"University of Missouri, Columbia, MO","active":true,"usgs":false}],"preferred":false,"id":652612,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Webb, Elisabeth B. 0000-0003-3851-6056 ewebb@usgs.gov","orcid":"https://orcid.org/0000-0003-3851-6056","contributorId":3981,"corporation":false,"usgs":true,"family":"Webb","given":"Elisabeth","email":"ewebb@usgs.gov","middleInitial":"B.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":652590,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Naylor, Luke W.","contributorId":145840,"corporation":false,"usgs":false,"family":"Naylor","given":"Luke","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":652613,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Raedeke, Andrew H.","contributorId":94083,"corporation":false,"usgs":true,"family":"Raedeke","given":"Andrew","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":652614,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Humburg, Dale D.","contributorId":79357,"corporation":false,"usgs":false,"family":"Humburg","given":"Dale","email":"","middleInitial":"D.","affiliations":[{"id":13073,"text":"Ducks Unlimited, Inc.","active":true,"usgs":false}],"preferred":false,"id":652615,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Coluccy, John M.","contributorId":111382,"corporation":false,"usgs":true,"family":"Coluccy","given":"John","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":652616,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Soulliere, Gregory J.","contributorId":172329,"corporation":false,"usgs":false,"family":"Soulliere","given":"Gregory","email":"","middleInitial":"J.","affiliations":[{"id":6987,"text":"U.S. Fish and Wildlife Sevice","active":true,"usgs":false}],"preferred":false,"id":652617,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70178046,"text":"70178046 - 2017 - Evaluating nest supplementation as a recovery strategy for the endangered rodents of the Florida Keys","interactions":[],"lastModifiedDate":"2017-03-15T14:13:53","indexId":"70178046","displayToPublicDate":"2016-11-01T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3271,"text":"Restoration Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Evaluating nest supplementation as a recovery strategy for the endangered rodents of the Florida Keys","docAbstract":"<p><span>The Key Largo woodrat (</span><i>Neotoma floridana smalli</i><span>) and Key Largo cotton mouse (</span><i>Peromyscus gossypinus allapaticola</i><span>) are federally endangered subspecies endemic to the tropical hardwood hammocks of Key Largo, Florida. Woodrats are considered generalists in habitat and diet, yet a steady decline in natural stick nests and capture rates over the past several decades suggests that they are limited by the availability of nesting habitat due to habitat loss and fragmentation. The more specialized Key Largo cotton mouse appears to rely on old growth hammock, a habitat type that is rare following past land clearing. In 2004, the U.S. Fish and Wildlife Service started building supplemental nest structures to restore habitat quality and connectivity for these endangered rodents, but nest use requires evaluation. We used camera traps and occupancy models to evaluate the factors influencing woodrat and cotton mouse use of the supplemental nests. We detected woodrats at 65 and cotton mice at 175 of 284 sampled nest structures, with co-occurrence at 38 nests. Woodrat nest use followed a gradient from low nest use in the north to high nest use in the south, which might relate to the proximity of free-ranging domestic cat (</span><i>Felis catus</i><span>) colonies in residential developments. Cotton mouse nest use, however, was related positively to mature hammock and related negatively to disturbed areas (e.g. scarified lands). The two species occurred independently of each other. Stick-stacking behavior was observed at supplemental nests and, although it was correlated with detection of woodrats, it was not a strong predictor of their occurrence. We suggest that nest supplementation can be an important tool for species recovery as habitat quality continues to improve with succession.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/rec.12418","usgsCitation":"Cove, M., Simons, T.R., Gardner, B., Maurer, A.S., and O’Connell, A.F., 2017, Evaluating nest supplementation as a recovery strategy for the endangered rodents of the Florida Keys: Restoration Ecology, v. 25, no. 2, p. 253-260, https://doi.org/10.1111/rec.12418.","productDescription":"8 p.","startPage":"253","endPage":"260","ipdsId":"IP-066131","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":337480,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Florida","otherGeospatial":"Key Largo","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -82.16125488281249,\n              24.347096633808512\n            ],\n            [\n              -79.9639892578125,\n              24.347096633808512\n            ],\n            [\n              -79.9639892578125,\n              25.84439325019514\n            ],\n            [\n              -82.16125488281249,\n              25.84439325019514\n            ],\n            [\n              -82.16125488281249,\n              24.347096633808512\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"25","issue":"2","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2016-08-13","publicationStatus":"PW","scienceBaseUri":"5819a9c1e4b0bb36a4c91001","contributors":{"authors":[{"text":"Cove, Michael V.","contributorId":176507,"corporation":false,"usgs":false,"family":"Cove","given":"Michael V.","affiliations":[],"preferred":false,"id":652605,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Simons, Theodore R. 0000-0002-1884-6229 tsimons@usgs.gov","orcid":"https://orcid.org/0000-0002-1884-6229","contributorId":2623,"corporation":false,"usgs":true,"family":"Simons","given":"Theodore","email":"tsimons@usgs.gov","middleInitial":"R.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":652591,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Gardner, Beth","contributorId":91612,"corporation":false,"usgs":false,"family":"Gardner","given":"Beth","affiliations":[{"id":13553,"text":"University of Washington-Seattle","active":true,"usgs":false}],"preferred":false,"id":652606,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Maurer, Andrew S.","contributorId":176508,"corporation":false,"usgs":false,"family":"Maurer","given":"Andrew","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":652607,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"O’Connell, Allan F. 0000-0001-7032-7023 aoconnell@usgs.gov","orcid":"https://orcid.org/0000-0001-7032-7023","contributorId":471,"corporation":false,"usgs":true,"family":"O’Connell","given":"Allan","email":"aoconnell@usgs.gov","middleInitial":"F.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":652608,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70177944,"text":"70177944 - 2017 - Hydrologic restoration in a dynamic subtropical mangrove-to-marsh ecotone","interactions":[],"lastModifiedDate":"2017-06-28T10:23:25","indexId":"70177944","displayToPublicDate":"2016-10-31T12:30:35","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3271,"text":"Restoration Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Hydrologic restoration in a dynamic subtropical mangrove-to-marsh ecotone","docAbstract":"<p><span>Extensive hydrologic modifications in coastal regions across the world have occurred to support infrastructure development, altering the function of many coastal wetlands. Wetland restoration success is dependent on the existence of hydrologic regimes that support development of appropriate soils and the growth and persistence of wetland vegetation. In Florida, United States, the Comprehensive Everglades Restoration Program (CERP) seeks to restore, protect, and preserve water resources of the greater Everglades region. Herein we describe vegetation dynamics in a mangrove-to-marsh ecotone within the impact area of a CERP hydrologic restoration project currently under development. Vegetation communities are also described for a similar area outside the project area. We found that vegetation shifts within the impact area occurred over a 7-year period; cover of herbaceous species varied by location, and an 88% increase in the total number of mangrove seedlings was documented. We attribute these shifts to the existing modified hydrologic regime, which is characterized by a low volume of freshwater sheet flow compared with historical conditions (i.e. before modification), as well as increased tidal influence. We also identified a significant trend of decreasing soil surface elevation at the impact area. The CERP restoration project is designed to increase freshwater sheet flow to the impact area. Information from our study characterizing existing vegetation dynamics prior to implementation of the restoration project is required to allow documentation of long-term project effects on plant community composition and structure within a framework of background variation, thereby allowing assessment of the project's success in restoring critical ecosystem functions.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/rec.12452","usgsCitation":"Howard, R.J., Day, R.H., Krauss, K.W., From, A.S., Allain, L.K., and Cormier, N., 2017, Hydrologic restoration in a dynamic subtropical mangrove-to-marsh ecotone: Restoration Ecology, v. 25, no. 3, p. 471-482, https://doi.org/10.1111/rec.12452.","productDescription":"12 p.","startPage":"471","endPage":"482","ipdsId":"IP-077093","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":438461,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9ZLM50V","text":"USGS data release","linkHelpText":"Vegetation survey of southwest Florida for use in assessment of the Picayune Strand Restoration Project effects"},{"id":330576,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Florida ","otherGeospatial":"Big Cypress National Rreserve","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -81.57485961914062,\n              26.025319095640015\n            ],\n            [\n              -81.48422241210938,\n              26.00865837808846\n            ],\n            [\n              -81.42105102539061,\n              25.988909281163984\n            ],\n            [\n              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dayr@usgs.gov","orcid":"https://orcid.org/0000-0002-5959-7054","contributorId":2427,"corporation":false,"usgs":true,"family":"Day","given":"Richard","email":"dayr@usgs.gov","middleInitial":"H.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":652443,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Krauss, Ken W. 0000-0003-2195-0729 kraussk@usgs.gov","orcid":"https://orcid.org/0000-0003-2195-0729","contributorId":2017,"corporation":false,"usgs":true,"family":"Krauss","given":"Ken","email":"kraussk@usgs.gov","middleInitial":"W.","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":652444,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"From, Andrew S. 0000-0002-6543-2627 froma@usgs.gov","orcid":"https://orcid.org/0000-0002-6543-2627","contributorId":5038,"corporation":false,"usgs":true,"family":"From","given":"Andrew","email":"froma@usgs.gov","middleInitial":"S.","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":false,"id":652445,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Allain, Larry K. 0000-0002-7717-9761 allainl@usgs.gov","orcid":"https://orcid.org/0000-0002-7717-9761","contributorId":2414,"corporation":false,"usgs":true,"family":"Allain","given":"Larry","email":"allainl@usgs.gov","middleInitial":"K.","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":652446,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Cormier, Nicole 0000-0003-2453-9900 cormiern@usgs.gov","orcid":"https://orcid.org/0000-0003-2453-9900","contributorId":4262,"corporation":false,"usgs":true,"family":"Cormier","given":"Nicole","email":"cormiern@usgs.gov","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":652447,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70177951,"text":"70177951 - 2017 - Groundwater response to the 2014 pulse flow in the Colorado River Delta","interactions":[],"lastModifiedDate":"2019-12-19T07:08:23","indexId":"70177951","displayToPublicDate":"2016-10-31T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1454,"text":"Ecological Engineering","active":true,"publicationSubtype":{"id":10}},"title":"Groundwater response to the 2014 pulse flow in the Colorado River Delta","docAbstract":"<p><span>During the March-May 2014 Colorado River Delta pulse flow, approximately 102&nbsp;×&nbsp;10</span><sup>6</sup><span>&nbsp;m</span><sup>3</sup><span> (82,000 acre-feet) of water was released into the channel at Morelos Dam, with additional releases further downstream. The majority of pulse flow water infiltrated and recharged the regional aquifer. Using groundwater-level and microgravity data we mapped the spatial and temporal distribution of changes in aquifer storage associated with pulse flow. Surface-water losses to infiltration were greatest around the Southerly International Boundary, where a lowered groundwater level owing to nearby pumping created increased storage potential as compared to other areas with shallower groundwater. Groundwater levels were elevated for several months after the pulse flow but had largely returned to pre-pulse levels by fall 2014. Elevated groundwater levels in the limitrophe (border) reach extended about 2&nbsp;km to the east around the midway point between the Northerly and Southerly International Boundaries, and about 4&nbsp;km to the east at the southern end. In the southern part of the delta, although total streamflow in the channel was less due to upstream infiltration, augmented deliveries through irrigation canals and possible irrigation return flows created sustained increases in groundwater levels during summer 2014. Results show that elevated groundwater levels and increases in groundwater storage were relatively short lived (confined to calendar year 2014), and that depressed water levels associated with groundwater pumping around San Luis, Arizona and San Luis Rio Colorado, Sonora cause large, unavoidable infiltration losses of in-channel water to groundwater in the vicinity.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.ecoleng.2016.10.072","usgsCitation":"Kennedy, J.R., Rodriguez-Burgueno, E., and Ramirez-Hernandez, J., 2017, Groundwater response to the 2014 pulse flow in the Colorado River Delta: Ecological Engineering, v. 106, no. B, p. 715-724, https://doi.org/10.1016/j.ecoleng.2016.10.072.","productDescription":"10 p.","startPage":"715","endPage":"724","ipdsId":"IP-073836","costCenters":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"links":[{"id":470210,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.ecoleng.2016.10.072","text":"Publisher Index Page"},{"id":330575,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States, Mexico","otherGeospatial":"Colorado River Basin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -114.71923828124999,\n              32.699488680852674\n            ],\n            [\n              -114.873046875,\n              32.80574473290688\n            ],\n            [\n              -117.1636962890625,\n              32.602361666817515\n            ],\n            [\n              -117.3175048828125,\n              32.46806060917602\n            ],\n            [\n              -116.3232421875,\n              30.850363469502362\n            ],\n            [\n              -114.5928955078125,\n              31.695455797778713\n            ],\n            [\n              -114.71923828124999,\n              32.699488680852674\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"106","issue":"B","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5818582de4b0bb36a4c6fa0d","contributors":{"authors":[{"text":"Kennedy, Jeffrey R. 0000-0002-3365-6589 jkennedy@usgs.gov","orcid":"https://orcid.org/0000-0002-3365-6589","contributorId":176478,"corporation":false,"usgs":true,"family":"Kennedy","given":"Jeffrey","email":"jkennedy@usgs.gov","middleInitial":"R.","affiliations":[],"preferred":true,"id":652458,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rodriguez-Burgueno, Eliana 0000-0002-5590-6606","orcid":"https://orcid.org/0000-0002-5590-6606","contributorId":176492,"corporation":false,"usgs":false,"family":"Rodriguez-Burgueno","given":"Eliana","email":"","affiliations":[],"preferred":false,"id":652510,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Ramirez-Hernandez, Jorge","contributorId":176218,"corporation":false,"usgs":false,"family":"Ramirez-Hernandez","given":"Jorge","affiliations":[],"preferred":false,"id":652511,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70178213,"text":"70178213 - 2017 - Breeding birds in managed forests on public conservation lands in the Mississippi Alluvial Valley","interactions":[],"lastModifiedDate":"2016-11-10T09:05:19","indexId":"70178213","displayToPublicDate":"2016-10-27T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1687,"text":"Forest Ecology and Management","active":true,"publicationSubtype":{"id":10}},"title":"Breeding birds in managed forests on public conservation lands in the Mississippi Alluvial Valley","docAbstract":"<p><span>Managers of public conservation lands in the Mississippi Alluvial Valley have implemented forest management strategies to improve bottomland hardwood habitat for target wildlife species. Through implementation of various silvicultural practices, forest managers have sought to attain forest structural conditions (e.g.,&nbsp;canopy cover, basal area, etc.) within values postulated to benefit wildlife. We evaluated data from point count surveys of breeding birds on 180 silviculturally treated stands (1049 counts) that ranged from 1 to 20&nbsp;years&nbsp;post-treatment and 134 control stands (676 counts) that had not been harvested for &gt;20&nbsp;years. Birds detected during 10-min counts were recorded within four distance classes and three time intervals. Avian diversity was greater on treated stands than on unharvested stands. Of 42 commonly detected species, six species including Prothonotary Warbler (</span><i>Prothonotaria citrea</i><span>) and Acadian Flycatcher (</span><i>Empidonax virescens</i><span>) were indicative of control stands. Similarly, six species including Indigo Bunting (</span><i>Passerina cyanea</i><span>) and Yellow-breasted Chat (</span><i>Icteria virens</i><span>) were indicative of treated stands. Using a removal model to assess probability of detection, we evaluated occupancy of bottomland forests at two spatial scales (stands and points within occupied stands). Wildlife-forestry treatment improved predictive models of species occupancy for 18 species. We found years post treatment (range&nbsp;=&nbsp;1–20), total basal area, and overstory canopy were important species-specific predictors of occupancy, whereas variability in basal area was not. In addition, we used a removal model to estimate species-specific probability of availability for detection, and a distance model to estimate effective detection radius. We used these two estimated parameters to derive species densities and 95% confidence intervals for treated and unharvested stands. Avian densities differed between treated and control stands for 16 species, but only Common Yellowthroat (</span><i>Geothlypis trichas</i><span>) and Yellow-breasted Chat had greater densities on treated stands.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.foreco.2016.10.031","usgsCitation":"Twedt, D.J., and Wilson, R.R., 2017, Breeding birds in managed forests on public conservation lands in the Mississippi Alluvial Valley: Forest Ecology and Management, v. 384, p. 180-190, https://doi.org/10.1016/j.foreco.2016.10.031.","productDescription":"11 p.","startPage":"180","endPage":"190","ipdsId":"IP-074454","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":330859,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":" Mississippi Alluvial Valley","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  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Center","active":true,"usgs":true}],"preferred":true,"id":653261,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wilson, R. Randy","contributorId":100287,"corporation":false,"usgs":true,"family":"Wilson","given":"R.","email":"","middleInitial":"Randy","affiliations":[],"preferred":false,"id":653262,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70177931,"text":"70177931 - 2017 - Assessments of species' vulnerability to climate change: From pseudo to science","interactions":[],"lastModifiedDate":"2017-01-10T13:28:53","indexId":"70177931","displayToPublicDate":"2016-10-27T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1006,"text":"Biodiversity and Conservation","active":true,"publicationSubtype":{"id":10}},"title":"Assessments of species' vulnerability to climate change: From pseudo to science","docAbstract":"<p><span>Climate change vulnerability assessments (CCVAs) are important tools to plan for and mitigate potential impacts of climate change. However, CCVAs often lack scientific rigor, which can ultimately lead to poor conservation prioritization and associated ecological and economic costs. We discuss the need to improve comparability and consistency of CCVAs and either validate their findings or improve assessment of CCVA uncertainty and sensitivity to methodological assumptions.</span></p>","language":"English","publisher":"Chapman & Hall","doi":"10.1007/s10531-016-1232-5","usgsCitation":"Wade, A., Hand, B., Kovach, R., Muhlfeld, C.C., Waples, R.S., and Luikart, G., 2017, Assessments of species' vulnerability to climate change: From pseudo to science: Biodiversity and Conservation, v. 26, no. 1, p. 223-229, https://doi.org/10.1007/s10531-016-1232-5.","productDescription":"7 p.","startPage":"223","endPage":"229","ipdsId":"IP-077982","costCenters":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"links":[{"id":330508,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"26","issue":"1","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-18","publicationStatus":"PW","scienceBaseUri":"5813125ce4b0b5a0c12ab64a","chorus":{"doi":"10.1007/s10531-016-1232-5","url":"http://dx.doi.org/10.1007/s10531-016-1232-5","publisher":"Springer Nature","authors":"Wade Alisa A., Hand Brian K., Kovach Ryan P., Muhlfeld Clint C., Waples Robin S., Luikart Gordon","journalName":"Biodiversity and Conservation","publicationDate":"10/18/2016","auditedOn":"2/1/2017","publiclyAccessibleDate":"10/18/2016"},"contributors":{"authors":[{"text":"Wade, Alisa A.","contributorId":145917,"corporation":false,"usgs":false,"family":"Wade","given":"Alisa A.","affiliations":[{"id":16296,"text":"University of Montana, Polson Montana 59860 USA","active":true,"usgs":false}],"preferred":false,"id":652401,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hand, Brian K.","contributorId":139248,"corporation":false,"usgs":false,"family":"Hand","given":"Brian K.","affiliations":[{"id":12707,"text":"Flathead Lake Biological Station, Fish and Wildlife Genomics Group, University of Montana, Polson, MT 59860","active":true,"usgs":false}],"preferred":false,"id":652402,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kovach, Ryan 0000-0001-5402-2123 rkovach@usgs.gov","orcid":"https://orcid.org/0000-0001-5402-2123","contributorId":145914,"corporation":false,"usgs":true,"family":"Kovach","given":"Ryan","email":"rkovach@usgs.gov","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":652400,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Muhlfeld, Clint C. 0000-0002-4599-4059 cmuhlfeld@usgs.gov","orcid":"https://orcid.org/0000-0002-4599-4059","contributorId":924,"corporation":false,"usgs":true,"family":"Muhlfeld","given":"Clint","email":"cmuhlfeld@usgs.gov","middleInitial":"C.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":652403,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Waples, Robin S.","contributorId":126721,"corporation":false,"usgs":false,"family":"Waples","given":"Robin","email":"","middleInitial":"S.","affiliations":[{"id":6578,"text":"National Marine Fisheries Service, Seattle, WA 98112, USA","active":true,"usgs":false}],"preferred":false,"id":652404,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Luikart, Gordon","contributorId":97409,"corporation":false,"usgs":false,"family":"Luikart","given":"Gordon","affiliations":[{"id":6580,"text":"University of Montana, Flathead Lake Biological Station, Polson, Montana 59860, USA","active":true,"usgs":false}],"preferred":false,"id":652405,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70177934,"text":"70177934 - 2017 - Climate, invasive species and land use drive population dynamics of a cold-water specialist","interactions":[],"lastModifiedDate":"2017-03-22T15:01:31","indexId":"70177934","displayToPublicDate":"2016-10-27T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2163,"text":"Journal of Applied Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Climate, invasive species and land use drive population dynamics of a cold-water specialist","docAbstract":"<ol id=\"jpe12766-list-0001\" class=\"o-list--numbered o-list--paragraph\"><li>Climate change is an additional stressor in a complex suite of threats facing freshwater biodiversity, particularly for cold-water fishes. Research addressing the consequences of climate change on cold-water fish has generally focused on temperature limits defining spatial distributions, largely ignoring how climatic variation influences population dynamics in the context of other existing stressors.</li><li>We used long-term data from 92 populations of bull trout <i>Salvelinus confluentus</i> – one of North America's most cold-adapted fishes – to quantify additive and interactive effects of climate, invasive species and land use on population dynamics (abundance, variability and growth rate).</li><li>Populations were generally depressed, more variable and declining where spawning and rearing stream habitat was limited, invasive species and land use were prevalent and stream temperatures were highest. Increasing stream temperature acted additively and independently, whereas land use and invasive species had additive and interactive effects (i.e. the impact of one stressor depended on exposure to the other stressor).</li><li>Most (58%–78%) of the explained variation in population dynamics was attributed to the presence of invasive species, differences in life history and management actions in foraging habitats in rivers, lakes and reservoirs. Although invasive fishes had strong negative effects on populations in foraging habitats, proactive control programmes appeared to effectively temper their negative impact.</li><li><i>Synthesis and applications</i>. Long-term demographic data emphasize that climate warming&nbsp;will exacerbate imperilment of cold-water specialists like bull trout, yet other stressors – especially invasive fishes – are immediate threats that can be addressed by proactive management actions. Therefore, climate-adaptation strategies for freshwater biodiversity&nbsp;should consider existing abiotic and biotic stressors, some of which provide potential&nbsp;and realized opportunity for conservation of freshwater biodiversity in a warming world.</li></ol>","language":"English","publisher":"British Ecological Society","doi":"10.1111/1365-2664.12766","usgsCitation":"Kovach, R.P., Al-Chokhachy, R.K., Whited, D.C., Schmetterling, D.A., Dux, A.M., and Muhlfeld, C.C., 2017, Climate, invasive species and land use drive population dynamics of a cold-water specialist: Journal of Applied Ecology, v. 54, no. 2, p. 638-647, https://doi.org/10.1111/1365-2664.12766.","productDescription":"10 p.","startPage":"638","endPage":"647","ipdsId":"IP-073215","costCenters":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"links":[{"id":488532,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/1365-2664.12766","text":"Publisher Index Page"},{"id":330511,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"54","issue":"2","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2016-09-05","publicationStatus":"PW","scienceBaseUri":"5813125be4b0b5a0c12ab640","chorus":{"doi":"10.1111/1365-2664.12766","url":"http://dx.doi.org/10.1111/1365-2664.12766","publisher":"Wiley-Blackwell","authors":"Kovach Ryan P., Al-Chokhachy Robert, Whited Diane C., Schmetterling David A., Dux Andrew M., Muhlfeld Clint C.","journalName":"Journal of Applied Ecology","publicationDate":"9/5/2016","publiclyAccessibleDate":"9/5/2016"},"contributors":{"authors":[{"text":"Kovach, Ryan P. rkovach@usgs.gov","contributorId":5772,"corporation":false,"usgs":true,"family":"Kovach","given":"Ryan","email":"rkovach@usgs.gov","middleInitial":"P.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":false,"id":652419,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Al-Chokhachy, Robert K. 0000-0002-2136-5098 ral-chokhachy@usgs.gov","orcid":"https://orcid.org/0000-0002-2136-5098","contributorId":1674,"corporation":false,"usgs":true,"family":"Al-Chokhachy","given":"Robert","email":"ral-chokhachy@usgs.gov","middleInitial":"K.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":652420,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Whited, Diane C.","contributorId":145916,"corporation":false,"usgs":false,"family":"Whited","given":"Diane","email":"","middleInitial":"C.","affiliations":[{"id":16296,"text":"University of Montana, Polson Montana 59860 USA","active":true,"usgs":false}],"preferred":false,"id":652421,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Schmetterling, David A.","contributorId":20223,"corporation":false,"usgs":true,"family":"Schmetterling","given":"David","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":652422,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dux, Andrew M.","contributorId":175256,"corporation":false,"usgs":false,"family":"Dux","given":"Andrew","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":652423,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Muhlfeld, Clint C. 0000-0002-4599-4059 cmuhlfeld@usgs.gov","orcid":"https://orcid.org/0000-0002-4599-4059","contributorId":924,"corporation":false,"usgs":true,"family":"Muhlfeld","given":"Clint","email":"cmuhlfeld@usgs.gov","middleInitial":"C.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":652424,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70177847,"text":"70177847 - 2017 - A history of the 2014 Minute 319 environmental pulse flow asdocumented by field measurements and satellite imagery","interactions":[],"lastModifiedDate":"2017-08-27T18:37:40","indexId":"70177847","displayToPublicDate":"2016-10-25T11:15:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1454,"text":"Ecological Engineering","active":true,"publicationSubtype":{"id":10}},"title":"A history of the 2014 Minute 319 environmental pulse flow asdocumented by field measurements and satellite imagery","docAbstract":"<p><span>As provided in Minute 319 of the U.S.-Mexico Water Treaty of 1944, a pulse flow of approximately 132 million cubic meters (mcm) was released to the riparian corridor of the Colorado River Delta over an eight-week period that began March 23, 2014 and ended May 18, 2014. Peak flows were released in the early part of the pulse to simulate a spring flood, with approximately 101.7&nbsp;mcm released at Morelos Dam on the U.S.-Mexico border. The remainder of the pulse flow water was released to the riparian corridor via Mexicali Valley irrigation spillway canals, with 20.9&nbsp;mcm released at Km 27 Spillway (41&nbsp;km below Morelos Dam) and 9.3&nbsp;mcm released at Km 18 Spillway (78&nbsp;km below Morelos Dam). We used sequential satellite images, overflights, ground observations, water discharge measurements, and automated temperature, river stage and water quality loggers to document and describe the progression of pulse flow water through the study area. The rate of advance of the wetted front was slowed by infiltration and high channel roughness as the pulse flow crossed more than 40&nbsp;km of dry channel which was disconnected from underlying groundwater and partially overgrown with salt cedar. High lag time and significant attenuation of flow resulted in a changing hydrograph as the pulse flow progressed to the downstream delivery points; two peak flows occurred in some lower reaches. The pulse flow advanced more than 120&nbsp;km downstream from Morelos Dam to reach the Colorado River estuary at the northern end of the Gulf of California.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.ecoleng.2016.10.040","usgsCitation":"Nelson, S., Ramirez-Hernandez, J., Rodriguez-Burgeueno, J.E., Milliken, J., Kennedy, J.R., Zamora-Arroyo, F., Schlatter, K., Santiago-Serrano, E., and Carrera-Villa, E., 2017, A history of the 2014 Minute 319 environmental pulse flow asdocumented by field measurements and satellite imagery: Ecological Engineering, v. 106, no. B, p. 733-748, https://doi.org/10.1016/j.ecoleng.2016.10.040.","productDescription":"16 p.","startPage":"733","endPage":"748","ipdsId":"IP-072720","costCenters":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"links":[{"id":330356,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"106","issue":"B","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58106f97e4b0f497e796110b","contributors":{"authors":[{"text":"Nelson, Steven M.","contributorId":176230,"corporation":false,"usgs":false,"family":"Nelson","given":"Steven M.","affiliations":[],"preferred":false,"id":651934,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ramirez-Hernandez, Jorge","contributorId":176218,"corporation":false,"usgs":false,"family":"Ramirez-Hernandez","given":"Jorge","affiliations":[],"preferred":false,"id":651935,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rodriguez-Burgeueno, J. Eliana","contributorId":176219,"corporation":false,"usgs":false,"family":"Rodriguez-Burgeueno","given":"J.","email":"","middleInitial":"Eliana","affiliations":[],"preferred":false,"id":651936,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Milliken, Jeff","contributorId":130998,"corporation":false,"usgs":false,"family":"Milliken","given":"Jeff","email":"","affiliations":[{"id":7203,"text":"DOI, Bureau of Reclamation","active":true,"usgs":false}],"preferred":false,"id":651937,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kennedy, Jeffrey R. 0000-0002-3365-6589 jkennedy@usgs.gov","orcid":"https://orcid.org/0000-0002-3365-6589","contributorId":2172,"corporation":false,"usgs":true,"family":"Kennedy","given":"Jeffrey","email":"jkennedy@usgs.gov","middleInitial":"R.","affiliations":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"preferred":true,"id":651933,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Zamora-Arroyo, Francisco","contributorId":75834,"corporation":false,"usgs":true,"family":"Zamora-Arroyo","given":"Francisco","email":"","affiliations":[],"preferred":false,"id":651938,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Schlatter, Karen","contributorId":176222,"corporation":false,"usgs":false,"family":"Schlatter","given":"Karen","email":"","affiliations":[],"preferred":false,"id":651939,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Santiago-Serrano, Edith","contributorId":176223,"corporation":false,"usgs":false,"family":"Santiago-Serrano","given":"Edith","email":"","affiliations":[],"preferred":false,"id":651940,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Carrera-Villa, Edgar","contributorId":176232,"corporation":false,"usgs":false,"family":"Carrera-Villa","given":"Edgar","email":"","affiliations":[],"preferred":false,"id":651960,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70177861,"text":"70177861 - 2017 - A landscape-scale assessment of above- and belowground primary production in coastal wetlands: Implications for climate change-induced community shifts","interactions":[],"lastModifiedDate":"2017-03-22T15:02:40","indexId":"70177861","displayToPublicDate":"2016-10-25T10:15:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1584,"text":"Estuaries and Coasts","active":true,"publicationSubtype":{"id":10}},"title":"A landscape-scale assessment of above- and belowground primary production in coastal wetlands: Implications for climate change-induced community shifts","docAbstract":"<p><span>Above- and belowground production in coastal wetlands are important contributors to carbon accumulation and ecosystem sustainability. As sea level rises, we can expect shifts to more salt-tolerant communities, which may alter these ecosystem functions and services. Although the direct influence of salinity on species-level primary production has been documented, we lack an understanding of the landscape-level response of coastal wetlands to increasing salinity. What are the indirect effects of sea-level rise, i.e., how does primary production vary across a landscape gradient of increasing salinity that incorporates changes in wetland type? This is the first study to measure both above- and belowground production in four wetland types that span an entire coastal gradient from fresh to saline wetlands. We hypothesized that increasing salinity would limit rates of primary production, and saline marshes would have lower rates of above- and belowground production than fresher marshes. However, along the Northern Gulf of Mexico Coast in Louisiana, USA, we found that aboveground production was highest in brackish marshes, compared with fresh, intermediate, and saline marshes, and belowground production was similar among all wetland types along the salinity gradient. Multiple regression analysis indicated that salinity was the only significant predictor of production, and its influence was dependent upon wetland type. We concluded that (1) salinity had a negative effect on production within wetland type, and this relationship was strongest in the fresh marsh (0–2&nbsp;PSU) and (2) along the overall landscape gradient, production was maintained by mechanisms at the scale of wetland type, which were likely related to plant energetics. Regardless of wetland type, we found that belowground production was significantly greater than aboveground production. Additionally, inter-annual variation, associated with severe drought conditions, was observed exclusively for belowground production, which may be a more sensitive indicator of ecosystem health than aboveground production.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s12237-016-0177-y","usgsCitation":"Stagg, C.L., Schoolmaster, D.R., Piazza, S.C., Snedden, G., Steyer, G.D., Fischenich, C.J., and McComas, R.W., 2017, A landscape-scale assessment of above- and belowground primary production in coastal wetlands: Implications for climate change-induced community shifts: Estuaries and Coasts, v. 40, no. 3, p. 856-879, https://doi.org/10.1007/s12237-016-0177-y.","productDescription":"24 p.","startPage":"856","endPage":"879","ipdsId":"IP-074119","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":438463,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7G44NFJ","text":"USGS data release","linkHelpText":"Primary production across a coastal wetland landscape in Louisiana, U.S.A. (2012-2014)"},{"id":330353,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"40","issue":"3","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-24","publicationStatus":"PW","scienceBaseUri":"58106f97e4b0f497e796110f","contributors":{"authors":[{"text":"Stagg, Camille L. 0000-0002-1125-7253 staggc@usgs.gov","orcid":"https://orcid.org/0000-0002-1125-7253","contributorId":4111,"corporation":false,"usgs":true,"family":"Stagg","given":"Camille","email":"staggc@usgs.gov","middleInitial":"L.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":651950,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schoolmaster, Donald R. Jr. 0000-0003-0910-4458 schoolmasterd@usgs.gov","orcid":"https://orcid.org/0000-0003-0910-4458","contributorId":4746,"corporation":false,"usgs":true,"family":"Schoolmaster","given":"Donald","suffix":"Jr.","email":"schoolmasterd@usgs.gov","middleInitial":"R.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":651951,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Piazza, Sarai C. 0000-0001-6962-9008 piazzas@usgs.gov","orcid":"https://orcid.org/0000-0001-6962-9008","contributorId":466,"corporation":false,"usgs":true,"family":"Piazza","given":"Sarai","email":"piazzas@usgs.gov","middleInitial":"C.","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":false,"id":651952,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Snedden, Gregg 0000-0001-7821-3709 sneddeng@usgs.gov","orcid":"https://orcid.org/0000-0001-7821-3709","contributorId":140235,"corporation":false,"usgs":true,"family":"Snedden","given":"Gregg","email":"sneddeng@usgs.gov","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":651953,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Steyer, Gregory D. 0000-0001-7231-0110 steyerg@usgs.gov","orcid":"https://orcid.org/0000-0001-7231-0110","contributorId":2856,"corporation":false,"usgs":true,"family":"Steyer","given":"Gregory","email":"steyerg@usgs.gov","middleInitial":"D.","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":5064,"text":"Southeast Regional Director's Office","active":true,"usgs":true},{"id":5062,"text":"Office of the Chief Scientist for Ecosystems","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":651954,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Fischenich, Craig J","contributorId":176226,"corporation":false,"usgs":false,"family":"Fischenich","given":"Craig","email":"","middleInitial":"J","affiliations":[],"preferred":false,"id":651955,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"McComas, Robert W.","contributorId":176227,"corporation":false,"usgs":false,"family":"McComas","given":"Robert","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":651956,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70177984,"text":"70177984 - 2017 - Improving spatio-temporal benefit transfers for pest control by generalist predators in cotton in the southwestern U.S.","interactions":[],"lastModifiedDate":"2020-09-01T14:19:50.040593","indexId":"70177984","displayToPublicDate":"2016-10-25T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2029,"text":"International Journal of Biodiversity Science, Ecosystem Services and Management","active":true,"publicationSubtype":{"id":10}},"title":"Improving spatio-temporal benefit transfers for pest control by generalist predators in cotton in the southwestern U.S.","docAbstract":"<p><span>Given rapid changes in agricultural practice, it is critical to understand how alterations in ecological, technological, and economic conditions over time and space impact ecosystem services in agroecosystems. Here, we present a benefit transfer approach to quantify cotton pest-control services provided by a generalist predator, the Mexican free-tailed bat (</span><i>Tadarida brasiliensis mexicana</i><span>), in the southwestern United States. We show that pest-control estimates derived using (1) a </span><i>compound spatial</i><span>–</span><i>temporal</i><span> model – which incorporates spatial and temporal variability in crop pest-control service values – are likely to exhibit less error than those derived using (2) a </span><i>simple-spatial</i><span> model (i.e., a model that extrapolates values derived for one area directly, without adjustment, to other areas) or (3) a </span><i>simple-temporal</i><span> model (i.e., a model that extrapolates data from a few points in time over longer time periods). Using our compound spatial–temporal approach, the annualized pest-control value was \\$12.2 million, in contrast to an estimate of \\$70.1 million (5.7 times greater), obtained from the simple-spatial approach. Using estimates from one year (simple-temporal approach) revealed large value differences (0.4 times smaller to 2 times greater). Finally, we present a detailed protocol for valuing pest-control services, which can be used to develop robust pest-control transfer functions for generalist predators in agroecosystems.</span></p>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/21513732.2016.1240712","usgsCitation":"Wiederholt, R., Bagstad, K.J., McCracken, G.F., Diffendorfer, J.E., Loomis, J., Semmens, D.J., Russell, A.L., Sansone, C., LaSharr, K., Cryan, P.M., Reynoso, C., Medellin, R., and Lopez-Hoffman, L., 2017, Improving spatio-temporal benefit transfers for pest control by generalist predators in cotton in the southwestern U.S.: International Journal of Biodiversity Science, Ecosystem Services and Management, v. 13, no. 1, p. 27-39, https://doi.org/10.1080/21513732.2016.1240712.","productDescription":"13 p.","startPage":"27","endPage":"39","ipdsId":"IP-056064","costCenters":[{"id":318,"text":"Geosciences and Environmental Change Science Center","active":true,"usgs":true},{"id":29789,"text":"John Wesley Powell Center for Analysis and Synthesis","active":true,"usgs":true}],"links":[{"id":470211,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/21513732.2016.1240712","text":"Publisher Index Page"},{"id":330572,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arizona, California, Kansas, New Mexico, Oklahoma, 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In this thought exercise, we attempted to convert all currently official names of species included in the virus family<span>&nbsp;</span></span><i>Arenaviridae</i><span><span>&nbsp;</span>and the virus order<span>&nbsp;</span></span><i>Mononegavirales</i><span><span>&nbsp;</span>to Linnaean binomials, and to identify and address associated challenges and concerns. Surprisingly, this endeavor was not as complicated or time-consuming as even the authors of this article expected when conceiving the experiment.</span></p>","language":"English","publisher":"Society of Systematic Biologists","doi":"10.1093/sysbio/syw096","usgsCitation":"Thomas, P., Clawson, A.N., Amarasinghe, G.K., Basler, C.F., Bavari, S., Benko, M., Blasdell, K.R., Briese, T., Buchmeier, M.J., Bukreyev, A., Calisher, C., Chandran, K., Charrel, R., Clegg, C.S., Collins, P.L., De la Torre, J.C., DeRisi, J.L., Dietzgen, R.G., Dolnik, O., Durrwald, R., Dye, J.M., Easton, A.J., Emonet, S., Formenty, P., Fouchier, R.A., Ghedin, E., Gonzalez, J., Harrach, B., Hewson, R., Horie, M., Jiang, D., Kobinger, G.P., Kondo, H., Kropinski, A., Krupovic, M., Kurath, G., Lamb, R.A., Leroy, E.M., Lukashevich, I.S., Maisner, A., Mushegian, A., Netesov, S.V., Nowotny, N., Patterson, J.L., Payne, S.L., Paweska, J.T., Peters, C., Radoshitzky, S., Rima, B.K., Romanowski, V., Rubbenstroth, D., Sabanadzovic, S., Sanfacon, H., Salvato, M., Schwemmle, M., Smither, S.J., Stenglein, M., Stone, D., Takada, A., Tesh, R.B., Tomonaga, K., Tordo, N., Towner, J.S., Vasilakis, N., Volchkov, V.E., Jensen, V., Walker, P.J., Wang, L., Varsani, A., Whitfield, A.E., Zerbini, F.M., and Kuhn, J.H., 2017, Possibility and challenges of conversion of current virus species names to Linnaean binomials: Systematic Biology, v. 66, no. 3, p. 463-473, https://doi.org/10.1093/sysbio/syw096.","productDescription":"11 p.","startPage":"463","endPage":"473","numberOfPages":"11","ipdsId":"IP-078979","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":470212,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/sysbio/syw096","text":"Publisher Index 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Center","active":true,"usgs":true}],"preferred":true,"id":715335,"contributorType":{"id":1,"text":"Authors"},"rank":36},{"text":"Lamb, Robert A.","contributorId":171987,"corporation":false,"usgs":false,"family":"Lamb","given":"Robert","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":715336,"contributorType":{"id":1,"text":"Authors"},"rank":37},{"text":"Leroy, Eric M.","contributorId":171989,"corporation":false,"usgs":false,"family":"Leroy","given":"Eric","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":715337,"contributorType":{"id":1,"text":"Authors"},"rank":38},{"text":"Lukashevich, Igor S.","contributorId":198198,"corporation":false,"usgs":false,"family":"Lukashevich","given":"Igor","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":715338,"contributorType":{"id":1,"text":"Authors"},"rank":39},{"text":"Maisner, 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L.","contributorId":171999,"corporation":false,"usgs":false,"family":"Patterson","given":"Jean","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":715343,"contributorType":{"id":1,"text":"Authors"},"rank":44},{"text":"Payne, Susan L.","contributorId":172004,"corporation":false,"usgs":false,"family":"Payne","given":"Susan","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":715344,"contributorType":{"id":1,"text":"Authors"},"rank":45},{"text":"Paweska, Janusz T.","contributorId":172005,"corporation":false,"usgs":false,"family":"Paweska","given":"Janusz","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":715345,"contributorType":{"id":1,"text":"Authors"},"rank":46},{"text":"Peters, C.J.","contributorId":188323,"corporation":false,"usgs":false,"family":"Peters","given":"C.J.","email":"","affiliations":[],"preferred":false,"id":715346,"contributorType":{"id":1,"text":"Authors"},"rank":47},{"text":"Radoshitzky, Sheli","contributorId":198201,"corporation":false,"usgs":false,"family":"Radoshitzky","given":"Sheli","email":"","affiliations":[],"preferred":false,"id":715347,"contributorType":{"id":1,"text":"Authors"},"rank":48},{"text":"Rima, Bertus K.","contributorId":172007,"corporation":false,"usgs":false,"family":"Rima","given":"Bertus","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":715348,"contributorType":{"id":1,"text":"Authors"},"rank":49},{"text":"Romanowski, Victor","contributorId":198202,"corporation":false,"usgs":false,"family":"Romanowski","given":"Victor","email":"","affiliations":[],"preferred":false,"id":715349,"contributorType":{"id":1,"text":"Authors"},"rank":50},{"text":"Rubbenstroth, Dennis","contributorId":172009,"corporation":false,"usgs":false,"family":"Rubbenstroth","given":"Dennis","email":"","affiliations":[],"preferred":false,"id":715399,"contributorType":{"id":1,"text":"Authors"},"rank":51},{"text":"Sabanadzovic, 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J.","contributorId":172012,"corporation":false,"usgs":false,"family":"Smither","given":"Sophie","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":715404,"contributorType":{"id":1,"text":"Authors"},"rank":56},{"text":"Stenglein, Mark","contributorId":198223,"corporation":false,"usgs":false,"family":"Stenglein","given":"Mark","affiliations":[],"preferred":false,"id":715405,"contributorType":{"id":1,"text":"Authors"},"rank":57},{"text":"Stone, D.M.","contributorId":114025,"corporation":false,"usgs":true,"family":"Stone","given":"D.M.","email":"","affiliations":[],"preferred":false,"id":715406,"contributorType":{"id":1,"text":"Authors"},"rank":58},{"text":"Takada, Ayato","contributorId":198224,"corporation":false,"usgs":false,"family":"Takada","given":"Ayato","email":"","affiliations":[],"preferred":false,"id":715407,"contributorType":{"id":1,"text":"Authors"},"rank":59},{"text":"Tesh, Robert B.","contributorId":127727,"corporation":false,"usgs":false,"family":"Tesh","given":"Robert","email":"","middleInitial":"B.","affiliations":[{"id":7126,"text":"Department of Pathology, Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, TX","active":true,"usgs":false}],"preferred":false,"id":715408,"contributorType":{"id":1,"text":"Authors"},"rank":60},{"text":"Tomonaga, Keizo","contributorId":198225,"corporation":false,"usgs":false,"family":"Tomonaga","given":"Keizo","email":"","affiliations":[],"preferred":false,"id":715409,"contributorType":{"id":1,"text":"Authors"},"rank":61},{"text":"Tordo, N.","contributorId":178357,"corporation":false,"usgs":false,"family":"Tordo","given":"N.","email":"","affiliations":[],"preferred":false,"id":715410,"contributorType":{"id":1,"text":"Authors"},"rank":62},{"text":"Towner, Jonathan S.","contributorId":198226,"corporation":false,"usgs":false,"family":"Towner","given":"Jonathan","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":715411,"contributorType":{"id":1,"text":"Authors"},"rank":63},{"text":"Vasilakis, Nikos","contributorId":196404,"corporation":false,"usgs":false,"family":"Vasilakis","given":"Nikos","email":"","affiliations":[],"preferred":false,"id":715412,"contributorType":{"id":1,"text":"Authors"},"rank":64},{"text":"Volchkov, Victor E.","contributorId":198227,"corporation":false,"usgs":false,"family":"Volchkov","given":"Victor","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":715413,"contributorType":{"id":1,"text":"Authors"},"rank":65},{"text":"Jensen, Victoria","contributorId":198228,"corporation":false,"usgs":false,"family":"Jensen","given":"Victoria","email":"","affiliations":[],"preferred":false,"id":715414,"contributorType":{"id":1,"text":"Authors"},"rank":66},{"text":"Walker, Peter J.","contributorId":24658,"corporation":false,"usgs":true,"family":"Walker","given":"Peter","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":715415,"contributorType":{"id":1,"text":"Authors"},"rank":67},{"text":"Wang, Lin-Fa","contributorId":198229,"corporation":false,"usgs":false,"family":"Wang","given":"Lin-Fa","email":"","affiliations":[],"preferred":false,"id":715416,"contributorType":{"id":1,"text":"Authors"},"rank":68},{"text":"Varsani, Arvind","contributorId":171722,"corporation":false,"usgs":false,"family":"Varsani","given":"Arvind","email":"","affiliations":[],"preferred":false,"id":715417,"contributorType":{"id":1,"text":"Authors"},"rank":69},{"text":"Whitfield, Anna E.","contributorId":198230,"corporation":false,"usgs":false,"family":"Whitfield","given":"Anna","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":715418,"contributorType":{"id":1,"text":"Authors"},"rank":70},{"text":"Zerbini, Francisco Murilo","contributorId":198231,"corporation":false,"usgs":false,"family":"Zerbini","given":"Francisco","email":"","middleInitial":"Murilo","affiliations":[],"preferred":false,"id":715419,"contributorType":{"id":1,"text":"Authors"},"rank":71},{"text":"Kuhn, Jens H.","contributorId":172013,"corporation":false,"usgs":false,"family":"Kuhn","given":"Jens","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":715420,"contributorType":{"id":1,"text":"Authors"},"rank":72}]}}
,{"id":70177026,"text":"70177026 - 2017 - Larval aquatic insect responses to cadmium and zinc in experimental streams","interactions":[],"lastModifiedDate":"2017-02-24T10:59:27","indexId":"70177026","displayToPublicDate":"2016-10-19T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1571,"text":"Environmental Toxicology and Chemistry","active":true,"publicationSubtype":{"id":10}},"title":"Larval aquatic insect responses to cadmium and zinc in experimental streams","docAbstract":"<p><span>To evaluate the risks of metal mixture effects to natural stream communities under ecologically relevant conditions, the authors conducted 30-d tests with benthic macroinvertebrates exposed to cadmium (Cd) and zinc (Zn) in experimental streams. The simultaneous exposures were with Cd and Zn singly and with Cd+Zn mixtures at environmentally relevant ratios. The tests produced concentration–response patterns that for individual taxa were interpreted in the same manner as classic single-species toxicity tests and for community metrics such as taxa richness and mayfly (Ephemeroptera) abundance were interpreted in the same manner as with stream survey data. Effect concentrations from the experimental stream exposures were usually 2 to 3 orders of magnitude lower than those from classic single-species tests. Relative to a response addition model, which assumes that the joint toxicity of the mixtures can be predicted from the product of their responses to individual toxicants, the Cd+Zn mixtures generally showed slightly less than additive toxicity. The authors applied a modeling approach called Tox to explore the mixture toxicity results and to relate the experimental stream results to field data. The approach predicts the accumulation of toxicants (hydrogen, Cd, and Zn) on organisms using a 2-p</span><i>K</i><sub>a</sub><span> bidentate model that defines interactions between dissolved cations and biological receptors (biotic ligands) and relates that accumulation through a logistic equation to biological response. The Tox modeling was able to predict Cd+Zn mixture responses from the single-metal exposures as well as responses from field data. The similarity of response patterns between the 30-d experimental stream tests and field data supports the environmental relevance of testing aquatic insects in experimental streams.</span></p>","language":"English","publisher":"Wiley","doi":"10.1002/etc.3599","usgsCitation":"Mebane, C.A., Schmidt, T., and Balistrieri, L.S., 2017, Larval aquatic insect responses to cadmium and zinc in experimental streams: Environmental Toxicology and Chemistry, v. 36, no. 3, p. 749-762, https://doi.org/10.1002/etc.3599.","productDescription":"14 p.","startPage":"749","endPage":"762","ipdsId":"IP-073601","costCenters":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"links":[{"id":329736,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"36","issue":"3","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2016-08-19","publicationStatus":"PW","scienceBaseUri":"58088687e4b0f497e78e24c5","contributors":{"authors":[{"text":"Mebane, Christopher A. 0000-0002-9089-0267 cmebane@usgs.gov","orcid":"https://orcid.org/0000-0002-9089-0267","contributorId":110,"corporation":false,"usgs":true,"family":"Mebane","given":"Christopher","email":"cmebane@usgs.gov","middleInitial":"A.","affiliations":[{"id":343,"text":"Idaho Water Science Center","active":true,"usgs":true}],"preferred":true,"id":651033,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schmidt, Travis S. 0000-0003-1400-0637 tschmidt@usgs.gov","orcid":"https://orcid.org/0000-0003-1400-0637","contributorId":1300,"corporation":false,"usgs":true,"family":"Schmidt","given":"Travis S.","email":"tschmidt@usgs.gov","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true},{"id":685,"text":"Wyoming-Montana Water Science Center","active":false,"usgs":true},{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":651034,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Balistrieri, Laurie S. 0000-0002-6359-3849 balistri@usgs.gov","orcid":"https://orcid.org/0000-0002-6359-3849","contributorId":1406,"corporation":false,"usgs":true,"family":"Balistrieri","given":"Laurie","email":"balistri@usgs.gov","middleInitial":"S.","affiliations":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true},{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true},{"id":662,"text":"Western Mineral and Environmental Resources Science Center","active":true,"usgs":true},{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":651032,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70170420,"text":"70170420 - 2017 - Camera system considerations for geomorphic applications of SfM photogrammetry","interactions":[],"lastModifiedDate":"2017-05-08T12:04:27","indexId":"70170420","displayToPublicDate":"2016-10-19T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1425,"text":"Earth Surface Processes and Landforms","active":true,"publicationSubtype":{"id":10}},"title":"Camera system considerations for geomorphic applications of SfM photogrammetry","docAbstract":"<p>The availability of high-resolution, multi-temporal, remotely sensed topographic data is revolutionizing geomorphic analysis. Three-dimensional topographic point measurements acquired from structure-from-motion (SfM) photogrammetry have been shown to be highly accurate and cost-effective compared to laser-based alternatives in some environments. Use of consumer-grade digital cameras to generate terrain models and derivatives is becoming prevalent within the geomorphic community despite the details of these instruments being largely overlooked in current SfM literature. This article is protected by copyright. All rights reserved.</p><p>A practical discussion of camera system selection, configuration, and image acquisition is presented. The hypothesis that optimizing source imagery can increase digital terrain model (DTM) accuracy is tested by evaluating accuracies of four SfM datasets conducted over multiple years of a gravel bed river floodplain using independent ground check points with the purpose of comparing morphological sediment budgets computed from SfM- and lidar-derived DTMs. Case study results are compared to existing SfM validation studies in an attempt to deconstruct the principle components of an SfM error budget. This article is protected by copyright. All rights reserved.</p><p>Greater information capacity of source imagery was found to increase pixel matching quality, which produced 8 times greater point density and 6 times greater accuracy. When propagated through volumetric change analysis, individual DTM accuracy (6–37 cm) was sufficient to detect moderate geomorphic change (order 100,000 m<sup>3</sup>) on an unvegetated fluvial surface; change detection determined from repeat lidar and SfM surveys differed by about 10%. Simple camera selection criteria increased accuracy by 64%; configuration settings or image post-processing techniques increased point density by 5–25% and decreased processing time by 10–30%. This article is protected by copyright. All rights reserved.</p><p>Regression analysis of 67 reviewed datasets revealed that the best explanatory variable to predict accuracy of SfM data is photographic scale. Despite the prevalent use of object distance ratios to describe scale, nominal ground sample distance is shown to be a superior metric, explaining 68% of the variability in mean absolute vertical error.</p>","language":"English","publisher":"Wiley","doi":"10.1002/esp.4066","usgsCitation":"Mosbrucker, A.R., Major, J.J., Spicer, K.R., and Pitlick, J., 2017, Camera system considerations for geomorphic applications of SfM photogrammetry: Earth Surface Processes and Landforms, v. 42, no. 6, p. 969-986, https://doi.org/10.1002/esp.4066.","productDescription":"18 p.","startPage":"969","endPage":"986","ipdsId":"IP-060527","costCenters":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":330899,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"42","issue":"6","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2017-01-03","publicationStatus":"PW","scienceBaseUri":"582443f4e4b09065cdf3051a","contributors":{"authors":[{"text":"Mosbrucker, Adam R. 0000-0003-0298-0324 amosbrucker@usgs.gov","orcid":"https://orcid.org/0000-0003-0298-0324","contributorId":4968,"corporation":false,"usgs":true,"family":"Mosbrucker","given":"Adam","email":"amosbrucker@usgs.gov","middleInitial":"R.","affiliations":[{"id":615,"text":"Volcano Hazards Program","active":true,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":627189,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Major, Jon J. 0000-0003-2449-4466 jjmajor@usgs.gov","orcid":"https://orcid.org/0000-0003-2449-4466","contributorId":439,"corporation":false,"usgs":true,"family":"Major","given":"Jon","email":"jjmajor@usgs.gov","middleInitial":"J.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":627190,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Spicer, Kurt R. 0000-0001-5030-3198 krspicer@usgs.gov","orcid":"https://orcid.org/0000-0001-5030-3198","contributorId":2684,"corporation":false,"usgs":true,"family":"Spicer","given":"Kurt","email":"krspicer@usgs.gov","middleInitial":"R.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":627191,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Pitlick, John","contributorId":168765,"corporation":false,"usgs":false,"family":"Pitlick","given":"John","email":"","affiliations":[{"id":25358,"text":"University of Colorado, Geography Dept., Boulder, CO","active":true,"usgs":false}],"preferred":false,"id":627192,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70177917,"text":"70177917 - 2017 - Mangrove expansion and contraction at a poleward range limit: Climate extremes and land-ocean temperature gradients","interactions":[],"lastModifiedDate":"2017-01-03T16:09:01","indexId":"70177917","displayToPublicDate":"2016-10-17T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1465,"text":"Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Mangrove expansion and contraction at a poleward range limit: Climate extremes and land-ocean temperature gradients","docAbstract":"<p><span>Within the context of climate change, there is a pressing need to better understand the ecological implications of changes in the frequency and intensity of climate extremes. Along subtropical coasts, less frequent and warmer freeze events are expected to permit freeze-sensitive mangrove forests to expand poleward and displace freeze-tolerant salt marshes. Here, our aim was to better understand the drivers of poleward mangrove migration by quantifying spatiotemporal patterns in mangrove range expansion and contraction across land-ocean temperature gradients. Our work was conducted in a freeze-sensitive mangrove-marsh transition zone that spans a land-ocean temperature gradient in one of the world's most wetland-rich regions (Mississippi River Deltaic Plain; Louisiana, USA). We used historical air temperature data (1893-2014), alternative future climate scenarios, and coastal wetland coverage data (1978-2011) to investigate spatiotemporal fluctuations and climate-wetland linkages. Our analyses indicate that changes in mangrove coverage have been controlled primarily by extreme freeze events (i.e., air temperatures below a threshold zone of -6.3 to -7.6 °C). We expect that in the past 121 years, mangrove range expansion and contraction has occurred across land-ocean temperature gradients. Mangrove resistance, resilience, and dominance were all highest in areas closer to the ocean where temperature extremes were buffered by large expanses of water and saturated soil. Under climate change, these areas will likely serve as local hotspots for mangrove dispersal, growth, range expansion, and displacement of salt marsh. Collectively, our results show that the frequency and intensity of freeze events across land-ocean temperature gradients greatly influences spatiotemporal patterns of range expansion and contraction of freeze-sensitive mangroves. We expect that, along subtropical coasts, similar processes govern the distribution and abundance of other freeze-sensitive organisms. In broad terms, our findings can be used to better understand and anticipate the ecological effects of changing winter climate extremes, especially within the transition zone between tropical and temperate climates.</span></p>","language":"English","publisher":"Ecological Society of America","doi":"10.1002/ecy.1625","usgsCitation":"Osland, M.J., Day, R.H., Hall, C., Brumfield, M.D., Dugas, J., and Jones, W.R., 2017, Mangrove expansion and contraction at a poleward range limit: Climate extremes and land-ocean temperature gradients: Ecology, v. 98, no. 1, p. 125-137, https://doi.org/10.1002/ecy.1625.","productDescription":"13 p.","startPage":"125","endPage":"137","ipdsId":"IP-071497","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":330414,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Louisiana","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -93,\n              29.1\n            ],\n            [\n              -93,\n              30.6\n            ],\n            [\n              -89.3,\n              30.6\n            ],\n            [\n              -89.3,\n              29.1\n            ],\n            [\n              -93,\n              29.1\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"98","issue":"1","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationDate":"2016-12-09","publicationStatus":"PW","scienceBaseUri":"5811c0f1e4b0f497e79a5a69","chorus":{"doi":"10.1002/ecy.1625","url":"http://dx.doi.org/10.1002/ecy.1625","publisher":"Wiley-Blackwell","authors":"Osland Michael J., Day Richard H., Hall Courtney T., Brumfield Marisa D., Dugas Jason L., Jones William R.","journalName":"Ecology","publicationDate":"12/9/2016","auditedOn":"12/17/2016","publiclyAccessibleDate":"12/9/2016"},"contributors":{"authors":[{"text":"Osland, Michael J. 0000-0001-9902-8692 mosland@usgs.gov","orcid":"https://orcid.org/0000-0001-9902-8692","contributorId":3080,"corporation":false,"usgs":true,"family":"Osland","given":"Michael","email":"mosland@usgs.gov","middleInitial":"J.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":652221,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Day, Richard H. 0000-0002-5959-7054 dayr@usgs.gov","orcid":"https://orcid.org/0000-0002-5959-7054","contributorId":2427,"corporation":false,"usgs":true,"family":"Day","given":"Richard","email":"dayr@usgs.gov","middleInitial":"H.","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":652222,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hall, Courtney T. 0000-0003-0990-5212","orcid":"https://orcid.org/0000-0003-0990-5212","contributorId":176330,"corporation":false,"usgs":true,"family":"Hall","given":"Courtney T.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":652227,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Brumfield, Marisa D","contributorId":176329,"corporation":false,"usgs":false,"family":"Brumfield","given":"Marisa","email":"","middleInitial":"D","affiliations":[],"preferred":false,"id":652224,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dugas, Jason 0000-0001-6094-7560 dugasj@usgs.gov","orcid":"https://orcid.org/0000-0001-6094-7560","contributorId":2996,"corporation":false,"usgs":true,"family":"Dugas","given":"Jason","email":"dugasj@usgs.gov","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":652225,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Jones, William R. 0000-0002-5493-4138 jonesb@usgs.gov","orcid":"https://orcid.org/0000-0002-5493-4138","contributorId":463,"corporation":false,"usgs":true,"family":"Jones","given":"William","email":"jonesb@usgs.gov","middleInitial":"R.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":652226,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70178194,"text":"70178194 - 2017 - Virulence and biodegradation potential of dynamic microbial communities associated with decaying <i>Cladophora</i> in Great Lakes","interactions":[],"lastModifiedDate":"2016-11-10T09:04:18","indexId":"70178194","displayToPublicDate":"2016-10-14T12:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Virulence and biodegradation potential of dynamic microbial communities associated with decaying <i>Cladophora</i> in Great Lakes","docAbstract":"<p><i>Cladophora</i><span> mats that accumulate and decompose along shorelines of the Great Lakes create potential threats to the health of humans and wildlife. The decaying algae create a low oxygen and redox potential environment favoring growth and persistence of anaerobic microbial populations, including </span><i>Clostridium botulinum</i><span>, the causal agent of botulism in humans, birds, and other wildlife. In addition to the diverse population of microbes, a dynamic chemical environment is generated, which involves production of numerous organic and inorganic substances, many of which are believed to be toxic to the sand and aquatic biotic communities. In this study, we used 16S-rDNA-based-amplicon sequencing and microfluidic-based quantitative PCR approaches to characterize the bacterial community structure and the abundances of human pathogens associated with </span><i>Cladophora</i><span> at different stages (up to 90&nbsp;days) of algal decay in laboratory microcosms. Oxygen levels were largely depleted after a few hours of incubation. As </span><i>Cladophora</i><span> decayed, the algal microbial biodiversity decreased within 24&nbsp;h, and the mat transitioned from an aerobic to anaerobic environment. There were increasing abundances of enteric and pathogenic bacteria during decomposition of </span><i>Cladophora</i><span>, including </span><i>Acinetobacter</i><span>, </span><i>Enterobacter</i><span>, </span><i>Kluyvera</i><span>, </span><i>Cedecea</i><span>, and others. In contrast, there were no or very few sequences (&lt;&nbsp;0.07%) assigned to such groups in fresh </span><i>Cladophora</i><span> samples. Principal coordinate analysis indicated that the bacterial community structure was dynamic and changed significantly with decay time. Knowledge of microbial communities and chemical composition of decaying algal mats is critical to our further understanding of the role that </span><i>Cladophora</i><span> plays in a beach ecosystem's structure and function, including the algal role in trophic interactions. Based on these findings, public and environmental health concerns should be considered when decaying </span><i>Cladophora</i><span> mats accumulate Great Lakes shorelines.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2016.09.107","usgsCitation":"Chun, C.L., Peller, J.R., Shively, D., Byappanahalli, M.N., Whitman, R.L., Staley, C., Zhang, Q., Ishii, S., and Sadowsky, M.J., 2017, Virulence and biodegradation potential of dynamic microbial communities associated with decaying <i>Cladophora</i> in Great Lakes: Science of the Total Environment, v. 574, p. 872-880, https://doi.org/10.1016/j.scitotenv.2016.09.107.","productDescription":"9 p.","startPage":"872","endPage":"880","numberOfPages":"9","ipdsId":"IP-077107","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":330830,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":"Great Lakes","volume":"574","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5821a0d8e4b02f1a881de94b","contributors":{"authors":[{"text":"Chun, Chan Lan","contributorId":43251,"corporation":false,"usgs":false,"family":"Chun","given":"Chan","email":"","middleInitial":"Lan","affiliations":[{"id":12644,"text":"University of Minnesota, St. Paul","active":true,"usgs":false}],"preferred":false,"id":653218,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Peller, Julie R.","contributorId":48889,"corporation":false,"usgs":false,"family":"Peller","given":"Julie","email":"","middleInitial":"R.","affiliations":[{"id":12645,"text":"Indiana University - Northwest","active":true,"usgs":false}],"preferred":false,"id":653219,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Shively, Dawn","contributorId":93014,"corporation":false,"usgs":true,"family":"Shively","given":"Dawn","affiliations":[],"preferred":false,"id":653220,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Byappanahalli, Muruleedhara N. byappan@usgs.gov","contributorId":139462,"corporation":false,"usgs":true,"family":"Byappanahalli","given":"Muruleedhara","email":"byappan@usgs.gov","middleInitial":"N.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":false,"id":653221,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Whitman, Richard L. rwhitman@usgs.gov","contributorId":542,"corporation":false,"usgs":true,"family":"Whitman","given":"Richard","email":"rwhitman@usgs.gov","middleInitial":"L.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":653222,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Staley, Christopher","contributorId":176712,"corporation":false,"usgs":false,"family":"Staley","given":"Christopher","email":"","affiliations":[{"id":12930,"text":"BioTechnology Institute, University of Minnesota, St. Paul","active":true,"usgs":false}],"preferred":false,"id":653223,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Zhang, Qian 0000-0003-0500-5655","orcid":"https://orcid.org/0000-0003-0500-5655","contributorId":174393,"corporation":false,"usgs":false,"family":"Zhang","given":"Qian","email":"","affiliations":[{"id":38802,"text":"University of Maryland Center for Environmental Studies","active":true,"usgs":false}],"preferred":false,"id":653224,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Ishii, Satoshi","contributorId":8741,"corporation":false,"usgs":true,"family":"Ishii","given":"Satoshi","affiliations":[],"preferred":false,"id":653225,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Sadowsky, Michael J.","contributorId":34003,"corporation":false,"usgs":false,"family":"Sadowsky","given":"Michael","email":"","middleInitial":"J.","affiliations":[{"id":12644,"text":"University of Minnesota, St. Paul","active":true,"usgs":false}],"preferred":false,"id":653226,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70177946,"text":"70177946 - 2017 - Maternal androgens in avian brood parasites and their hosts: responses to parasitism and competition?","interactions":[],"lastModifiedDate":"2016-11-10T09:08:36","indexId":"70177946","displayToPublicDate":"2016-10-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1738,"text":"General and Comparative Endocrinology","active":true,"publicationSubtype":{"id":10}},"title":"Maternal androgens in avian brood parasites and their hosts: responses to parasitism and competition?","docAbstract":"In the coevolutionary dynamic of avian brood parasites and their hosts, maternal (or transgenerational) effects have rarely been investigated. We examined the potential role of elevated yolk testosterone in eggs of the principal brood parasite in North America, the brown-headed cowbird, and three of its frequent host species. Elevated maternal androgens in eggs are a common maternal effect observed in many avian species when breeding conditions are unfavorable. These steroids accelerate embryo development, shorten incubation period, increase nestling growth rate, and enhance begging vigor, all traits that can increase the survival of offspring. We hypothesized that elevated maternal androgens in host eggs are a defense against brood parasitism. Our second hypothesis was that elevated maternal androgens in cowbird eggs are a defense against intra-specific competition. For host species, we found that elevated yolk testosterone was correlated with parasitized nests of small species, those whose nest success is most reduced by cowbird parasitism. For cowbirds, we found that elevated yolk testosterone was correlated with eggs in multiply-parasitized nests, which indicate intra-specific competition for nests due to high cowbird density. We propose experimental work to further examine the use of maternal effects by cowbirds and their hosts.","language":"English","publisher":"Elsevier","doi":"10.1016/j.ygcen.2016.10.004","usgsCitation":"Hahn, C., Wingfield, J.C., Fox, D.M., Walker, B.G., and Thomley, J.E., 2017, Maternal androgens in avian brood parasites and their hosts: responses to parasitism and competition?: General and Comparative Endocrinology, v. 240, p. 143-152, https://doi.org/10.1016/j.ygcen.2016.10.004.","productDescription":"10 p.","startPage":"143","endPage":"152","ipdsId":"IP-065676","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":470213,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.ygcen.2016.10.004","text":"Publisher Index Page"},{"id":330586,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"240","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58185828e4b0bb36a4c6f9f5","contributors":{"authors":[{"text":"Hahn, Caldwell 0000-0002-5242-2059 chahn@usgs.gov","orcid":"https://orcid.org/0000-0002-5242-2059","contributorId":3203,"corporation":false,"usgs":true,"family":"Hahn","given":"Caldwell","email":"chahn@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":652449,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wingfield, John C.","contributorId":176474,"corporation":false,"usgs":false,"family":"Wingfield","given":"John","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":652450,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Fox, David M.","contributorId":176475,"corporation":false,"usgs":false,"family":"Fox","given":"David","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":652451,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Walker, Brian G.","contributorId":176476,"corporation":false,"usgs":false,"family":"Walker","given":"Brian","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":652452,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Thomley, Jill E","contributorId":176477,"corporation":false,"usgs":false,"family":"Thomley","given":"Jill","email":"","middleInitial":"E","affiliations":[],"preferred":false,"id":652453,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70177060,"text":"70177060 - 2017 - Analysis of local slopes at the InSight landing site on Mars","interactions":[],"lastModifiedDate":"2017-10-16T14:31:07","indexId":"70177060","displayToPublicDate":"2016-10-11T13:15:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3454,"text":"Space Science Reviews","active":true,"publicationSubtype":{"id":10}},"title":"Analysis of local slopes at the InSight landing site on Mars","docAbstract":"<p><span>To evaluate the topography of the surface within the InSight candidate landing ellipses, we generated Digital Terrain Models (DTMs) at lander scales and those appropriate for entry, descent, and landing simulations, along with orthoimages of both images in each stereopair, and adirectional slope images. These products were used to assess the distribution of slopes for each candidate ellipse and terrain type in the landing site region, paying particular attention to how these slopes impact InSight landing and engineering safety, and results are reported here. Overall, this region has extremely low slopes at 1-meter baseline scales and meets the safety constraints of the InSight lander. The majority of the landing ellipse has a mean slope at 1-meter baselines of 3.2°. In addition, a&nbsp;mosaic of HRSC, CTX, and HiRISE DTMs within the final landing ellipse (ellipse&nbsp;9) was generated to support entry, descent, and landing simulations and evaluations. Several methods were tested to generate this mosaic and the NASA Ames Stereo Pipeline program&nbsp;</span><i class=\"EmphasisTypeItalic \">dem_mosaic</i><span><span>&nbsp;</span>produced the best results. For the HRSC-CTX-HiRISE DTM mosaic, more than 99&nbsp;% of the mosaic has slopes less than 15°, and the introduction of artificially high slopes along image seams was minimized.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s11214-016-0292-x","usgsCitation":"Fergason, R.L., Kirk, R.L., Cushing, G.E., Galuszka, D.M., Golombek, M.P., Hare, T.M., Howington-Kraus, E., Kipp, D.M., and Redding, B.L., 2017, Analysis of local slopes at the InSight landing site on Mars: Space Science Reviews, v. 211, no. 1-4, p. 109-133, https://doi.org/10.1007/s11214-016-0292-x.","productDescription":"25 p.","startPage":"109","endPage":"133","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-076541","costCenters":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"links":[{"id":329758,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"211","issue":"1-4","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-11","publicationStatus":"PW","scienceBaseUri":"58088687e4b0f497e78e24c9","contributors":{"authors":[{"text":"Fergason, Robin L. 0000-0002-2044-1714 rfergason@usgs.gov","orcid":"https://orcid.org/0000-0002-2044-1714","contributorId":2753,"corporation":false,"usgs":true,"family":"Fergason","given":"Robin","email":"rfergason@usgs.gov","middleInitial":"L.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":651163,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kirk, Randolph L. 0000-0003-0842-9226 rkirk@usgs.gov","orcid":"https://orcid.org/0000-0003-0842-9226","contributorId":2765,"corporation":false,"usgs":true,"family":"Kirk","given":"Randolph","email":"rkirk@usgs.gov","middleInitial":"L.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":651164,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Cushing, Glen E. 0000-0002-9673-8207 gcushing@usgs.gov","orcid":"https://orcid.org/0000-0002-9673-8207","contributorId":175449,"corporation":false,"usgs":true,"family":"Cushing","given":"Glen","email":"gcushing@usgs.gov","middleInitial":"E.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":651165,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Galuszka, Donna M. 0000-0003-1870-1182 dgaluszka@usgs.gov","orcid":"https://orcid.org/0000-0003-1870-1182","contributorId":3186,"corporation":false,"usgs":true,"family":"Galuszka","given":"Donna","email":"dgaluszka@usgs.gov","middleInitial":"M.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":651169,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Golombek, Matthew P.","contributorId":175450,"corporation":false,"usgs":false,"family":"Golombek","given":"Matthew","email":"","middleInitial":"P.","affiliations":[{"id":7023,"text":"Jet Propulsion Laboratory, California Institute of Technology","active":true,"usgs":false}],"preferred":false,"id":651167,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hare, Trent M. 0000-0001-8842-389X thare@usgs.gov","orcid":"https://orcid.org/0000-0001-8842-389X","contributorId":3188,"corporation":false,"usgs":true,"family":"Hare","given":"Trent","email":"thare@usgs.gov","middleInitial":"M.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":651166,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Howington-Kraus, Elpitha 0000-0001-5787-6554 ahowington@usgs.gov","orcid":"https://orcid.org/0000-0001-5787-6554","contributorId":2815,"corporation":false,"usgs":true,"family":"Howington-Kraus","given":"Elpitha","email":"ahowington@usgs.gov","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":651168,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Kipp, Devin M","contributorId":175451,"corporation":false,"usgs":false,"family":"Kipp","given":"Devin","email":"","middleInitial":"M","affiliations":[{"id":7023,"text":"Jet Propulsion Laboratory, California Institute of Technology","active":true,"usgs":false}],"preferred":false,"id":651170,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Redding, Bonnie L. 0000-0001-8178-1467 bredding@usgs.gov","orcid":"https://orcid.org/0000-0001-8178-1467","contributorId":4798,"corporation":false,"usgs":true,"family":"Redding","given":"Bonnie","email":"bredding@usgs.gov","middleInitial":"L.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":651171,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70176843,"text":"70176843 - 2017 - Retrospective analysis of the epidemiologic literature, 1990–2015, on wildlife-associated diseases from the Republic of Korea","interactions":[],"lastModifiedDate":"2017-01-13T15:20:15","indexId":"70176843","displayToPublicDate":"2016-10-11T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2507,"text":"Journal of Wildlife Diseases","active":true,"publicationSubtype":{"id":10}},"title":"Retrospective analysis of the epidemiologic literature, 1990–2015, on wildlife-associated diseases from the Republic of Korea","docAbstract":"<p><span>To assess the status of research on wildlife diseases in the Republic of Korea (ROK) and to identify trends, knowledge gaps, and directions for future research, we reviewed epidemiologic publications on wildlife-associated diseases in the ROK. We identified a relatively small but rapidly increasing body of literature. The majority of publications were focused on public or livestock health and relatively few addressed wildlife health. Most studies that focused on human and livestock health were cross-sectional whereas wildlife health studies were mostly case reports. Fifteen diseases notifiable to the World Organisation for Animal Health were identified and 21 diseases were identified as notifiable to either the Korean Ministry of Health, Welfare, and Family Affairs or the Korean Ministry of Agriculture. Two diseases were reported as occurring as epidemics; highly pathogenic avian influenza (HPAI) and virulent Newcastle disease. Six diseases or disease agents were described in the literature as emerging including HPAI, rabies, </span><i><i>Babesia microti</i></i><span>, avian coronaviruses, scrub typhus, and severe fever thrombocytopenia syndrome virus. The diseases for which there were the largest number of publications were HPAI and rabies. The majority of wildlife-associated zoonotic disease publications focused on food-borne parasitic infections or rodent-associated diseases. Several publications focused on the potential of wildlife as reservoirs of livestock diseases; in particular, water deer (</span><i><i>Hydropotes inermis</i></i><span>) and wild boar (</span><i><i>Sus scrofa</i></i><span>). In contrast, there were few publications on diseases of concern for wildlife populations or research to understand the impacts of these diseases for wildlife management. Increased focus on prospective studies would enhance understanding of disease dynamics in wildlife populations. For the high-consequence diseases that impact multiple sectors, a One Health approach, with coordination among the public health, agricultural, and environmental sectors, would be important. This type of review can provide useful information for countries or regions planning or implementing national wildlife health programs.</span></p>","language":"English","publisher":"Wildlife Disease Association","doi":"10.7589/2015-12-348","usgsCitation":"Hwang, J., Lee, K., Kim, Y., Sleeman, J.M., and Lee, H., 2017, Retrospective analysis of the epidemiologic literature, 1990–2015, on wildlife-associated diseases from the Republic of Korea: Journal of Wildlife Diseases, v. 53, no. 1, p. 5-18, https://doi.org/10.7589/2015-12-348.","productDescription":"14 p.","startPage":"5","endPage":"18","ipdsId":"IP-071589","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":329421,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Korea","volume":"53","issue":"1","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57fe679be4b0824b2d143701","contributors":{"authors":[{"text":"Hwang, Jusun","contributorId":175221,"corporation":false,"usgs":false,"family":"Hwang","given":"Jusun","email":"","affiliations":[{"id":27539,"text":"College of Veterinary Medicine, Seoul National University, Seoul, Republic of Korea","active":true,"usgs":false}],"preferred":false,"id":650488,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lee, Kyunglee","contributorId":175223,"corporation":false,"usgs":false,"family":"Lee","given":"Kyunglee","email":"","affiliations":[{"id":27540,"text":"Cetacean Research Institute, National Fisheries Research and Development Institute, Ulsan, Republic of Korea","active":true,"usgs":false}],"preferred":false,"id":650490,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kim, Young-Jun","contributorId":175224,"corporation":false,"usgs":false,"family":"Kim","given":"Young-Jun","email":"","affiliations":[{"id":27541,"text":"Department of Veterinary Medicine, National Institute of Ecology, Geumgangro 1210, Maseo-myeon, Seocheon-gun, Chungnam-Do, Republic of Korea","active":true,"usgs":false}],"preferred":false,"id":650491,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sleeman, Jonathan M. 0000-0002-9910-6125 jsleeman@usgs.gov","orcid":"https://orcid.org/0000-0002-9910-6125","contributorId":128,"corporation":false,"usgs":true,"family":"Sleeman","given":"Jonathan","email":"jsleeman@usgs.gov","middleInitial":"M.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true},{"id":82110,"text":"Midcontinent Regional Director's Office","active":true,"usgs":true}],"preferred":true,"id":650487,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Lee, Hang","contributorId":175222,"corporation":false,"usgs":false,"family":"Lee","given":"Hang","affiliations":[{"id":27539,"text":"College of Veterinary Medicine, Seoul National University, Seoul, Republic of Korea","active":true,"usgs":false}],"preferred":false,"id":650489,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70176850,"text":"70176850 - 2017 - Characterizing the Kathmandu Valley sediment response through strong motion recordings of the 2015 Gorkha earthquake sequence","interactions":[],"lastModifiedDate":"2017-10-08T11:23:58","indexId":"70176850","displayToPublicDate":"2016-10-11T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3525,"text":"Tectonophysics","active":true,"publicationSubtype":{"id":10}},"title":"Characterizing the Kathmandu Valley sediment response through strong motion recordings of the 2015 Gorkha earthquake sequence","docAbstract":"<p><span>We analyze strong motion records and high-rate GPS measurements of the M 7.8 Gorkha mainshock, M 7.3 Dolakha, and two moderate aftershock events recorded at four stations on the Kathmandu basin sediments, and one on rock-outcrop. Recordings on soil from all four events show systematic amplification relative to the rock site at multiple frequencies in the 0.1–2.5&nbsp;Hz frequency range, and de-amplification of higher frequencies (&nbsp;&gt;2.5–10&nbsp;Hz). The soil-to-rock amplification ratios for the M 7.8 and M 7.3 events have lower amplitude and frequency peaks relative to the ratios of the two moderate events, effects that could be suggestive of nonlinear site response. Further, comparisons to ground motion prediction equations show that 1) both soil and rock mainshock recordings were severely depleted of high frequencies, and 2) the depletion at high frequencies is not present in the aftershocks. These observations indicate that the high frequency deamplification is additionally related to characteristics of the source that are not captured by simplified ground motion prediction equations, and allude to seismic hazard analysis models being revised – possibly by treating isolated high frequency radiation sources separately from long period components to capture large magnitude near-source events such as the 2015 Gorkha mainshock.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.tecto.2016.09.030","usgsCitation":"Rajaure, S., Asimaki, D., Thompson, E.M., Hough, S.E., Martin, S., Ampuero, J., Dhital, M., Inbal, A., Takai, N., Shigefuji, M., Bijukchhen, S., Ichiyanagi, M., Sasatani, T., and Paudel, L., 2017, Characterizing the Kathmandu Valley sediment response through strong motion recordings of the 2015 Gorkha earthquake sequence: Tectonophysics, v. 714-715, p. 146-157, https://doi.org/10.1016/j.tecto.2016.09.030.","productDescription":"12 p.","startPage":"146","endPage":"157","ipdsId":"IP-076848","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":470215,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.tecto.2016.09.030","text":"Publisher Index Page"},{"id":329418,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Nepal","otherGeospatial":"Kathmandu Valley","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              85.07675170898438,\n              27.527758206861886\n            ],\n            [\n              85.07675170898438,\n              27.902203909304404\n            ],\n            [\n              85.59722900390625,\n              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Technology","active":true,"usgs":false}],"preferred":false,"id":650512,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Thompson, Eric M. 0000-0002-6943-4806 emthompson@usgs.gov","orcid":"https://orcid.org/0000-0002-6943-4806","contributorId":146592,"corporation":false,"usgs":true,"family":"Thompson","given":"Eric","email":"emthompson@usgs.gov","middleInitial":"M.","affiliations":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":false,"id":650513,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hough, Susan E. 0000-0002-5980-2986 hough@usgs.gov","orcid":"https://orcid.org/0000-0002-5980-2986","contributorId":587,"corporation":false,"usgs":true,"family":"Hough","given":"Susan","email":"hough@usgs.gov","middleInitial":"E.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":650514,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Martin, Stacey","contributorId":35165,"corporation":false,"usgs":false,"family":"Martin","given":"Stacey","affiliations":[{"id":5110,"text":"Earth Observatory of Singapore, Nanyang Technological University","active":true,"usgs":false}],"preferred":false,"id":650515,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Ampuero, J.P.","contributorId":175236,"corporation":false,"usgs":false,"family":"Ampuero","given":"J.P.","affiliations":[{"id":27544,"text":"California Institute of Technology, Pasadena, California","active":true,"usgs":false}],"preferred":false,"id":650516,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Dhital, M.R.","contributorId":175237,"corporation":false,"usgs":false,"family":"Dhital","given":"M.R.","email":"","affiliations":[{"id":16728,"text":"Tribhuvan University","active":true,"usgs":false}],"preferred":false,"id":650517,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Inbal, A","contributorId":175238,"corporation":false,"usgs":false,"family":"Inbal","given":"A","affiliations":[{"id":27544,"text":"California Institute of Technology, Pasadena, California","active":true,"usgs":false}],"preferred":false,"id":650518,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Takai, N","contributorId":175239,"corporation":false,"usgs":false,"family":"Takai","given":"N","email":"","affiliations":[{"id":16855,"text":"Hokkaido University","active":true,"usgs":false}],"preferred":false,"id":650519,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Shigefuji, M.","contributorId":175240,"corporation":false,"usgs":false,"family":"Shigefuji","given":"M.","email":"","affiliations":[{"id":16855,"text":"Hokkaido University","active":true,"usgs":false}],"preferred":false,"id":650520,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Bijukchhen, S","contributorId":175241,"corporation":false,"usgs":false,"family":"Bijukchhen","given":"S","email":"","affiliations":[{"id":16855,"text":"Hokkaido University","active":true,"usgs":false}],"preferred":false,"id":650521,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Ichiyanagi, M","contributorId":175242,"corporation":false,"usgs":false,"family":"Ichiyanagi","given":"M","email":"","affiliations":[{"id":16855,"text":"Hokkaido University","active":true,"usgs":false}],"preferred":false,"id":650522,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Sasatani, T","contributorId":175243,"corporation":false,"usgs":false,"family":"Sasatani","given":"T","email":"","affiliations":[{"id":16855,"text":"Hokkaido University","active":true,"usgs":false}],"preferred":false,"id":650523,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Paudel, L","contributorId":175244,"corporation":false,"usgs":false,"family":"Paudel","given":"L","email":"","affiliations":[{"id":27545,"text":"Tribhvan University","active":true,"usgs":false}],"preferred":false,"id":650524,"contributorType":{"id":1,"text":"Authors"},"rank":14}]}}
,{"id":70177068,"text":"70177068 - 2017 - Ion-adsorption REEs in regolith of the Liberty Hill pluton, South Carolina, USA: An effect of hydrothermal alteration","interactions":[],"lastModifiedDate":"2018-10-22T09:18:20","indexId":"70177068","displayToPublicDate":"2016-10-11T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2302,"text":"Journal of Geochemical Exploration","active":true,"publicationSubtype":{"id":10}},"title":"Ion-adsorption REEs in regolith of the Liberty Hill pluton, South Carolina, USA: An effect of hydrothermal alteration","docAbstract":"<p><span>Ion-adsorbed rare earth element (REE) deposits supply the majority of world heavy REE production and substantial light REE production, but relatively little is known of their occurrence outside Southeast Asia. We examined the distribution and forms of REEs on a North American pluton located in the highly weathered and slowly eroding South Carolina Piedmont. The Hercynian Liberty Hill pluton experiences a modern climate that includes ~&nbsp;1500&nbsp;mm annual rainfall and a mean annual temperature of 17&nbsp;°C. The pluton is medium- to coarse-grained biotite-amphibole granite with minor biotite granite facies. REE-bearing phases are diverse and include monazite, zircon, titanite, allanite, apatite and bastnäsite. Weathered profiles were sampled up to 7&nbsp;m-deep across the ~&nbsp;400&nbsp;km</span><sup>2&nbsp;</sup><span>pluton. In one profile, ion-adsorbed REEs plus yttrium (REE&nbsp;+&nbsp;Y) ranged up to 581&nbsp;mg/kg and accounted for up to 77% of total REE&nbsp;+&nbsp;Y in saprolite. In other profiles, ion-adsorbed REE&nbsp;+&nbsp;Y ranged 12–194&nbsp;mg/kg and only accounted for 3–37% of totals. The profile most enriched in ion-adsorbed REEs was located along the mapped boundary of two granite facies and contained trioctahedral smectite in the saprolite, evidence suggestive of hydrothermal alteration of biotite at that location. Post-emplacement deuteric alteration can generate easily weathered REE phases, particularly fluorocarbonates. In the case of Liberty Hill, hydrothermal alteration may have converted less soluble to more soluble REE minerals. Additionally, regolith P content was inversely correlated with the fraction ion-adsorbed REEs, and weathering related secondary REE-phosphates were found in some regolith profiles. Both patterns illustrate how low P content aids in the accumulation of ion-adsorbed REEs. The localized occurrence at Liberty Hill sheds light on conditions and processes that generate ion-adsorbed REEs.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.gexplo.2016.09.009","usgsCitation":"Bern, C., Yesavage, T., and Foley, N.K., 2017, Ion-adsorption REEs in regolith of the Liberty Hill pluton, South Carolina, USA: An effect of hydrothermal alteration: Journal of Geochemical Exploration, v. 172, p. 29-40, https://doi.org/10.1016/j.gexplo.2016.09.009.","productDescription":"12 p.","startPage":"29","endPage":"40","ipdsId":"IP-075234","costCenters":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true},{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":470217,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.gexplo.2016.09.009","text":"Publisher Index Page"},{"id":329737,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"South Carolina","otherGeospatial":"Liberty Hill Pluton","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -80.75818061828613,\n              34.49562815822762\n            ],\n            [\n              -80.75818061828613,\n              34.50447006777167\n            ],\n            [\n              -80.74298858642577,\n              34.50447006777167\n            ],\n            [\n              -80.74298858642577,\n              34.49562815822762\n            ],\n            [\n              -80.75818061828613,\n              34.49562815822762\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"172","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58088684e4b0f497e78e24b3","chorus":{"doi":"10.1016/j.gexplo.2016.09.009","url":"http://dx.doi.org/10.1016/j.gexplo.2016.09.009","publisher":"Elsevier BV","authors":"Bern Carleton R., Yesavage Tiffany, Foley Nora K.","journalName":"Journal of Geochemical Exploration","publicationDate":"1/2017"},"contributors":{"authors":[{"text":"Bern, Carleton R. cbern@usgs.gov","contributorId":657,"corporation":false,"usgs":true,"family":"Bern","given":"Carleton R.","email":"cbern@usgs.gov","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":false,"id":651205,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Yesavage, Tiffany","contributorId":175456,"corporation":false,"usgs":false,"family":"Yesavage","given":"Tiffany","affiliations":[{"id":27571,"text":"USGS volunteer","active":true,"usgs":false}],"preferred":false,"id":651206,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Foley, Nora K. 0000-0003-0124-3509 nfoley@usgs.gov","orcid":"https://orcid.org/0000-0003-0124-3509","contributorId":4010,"corporation":false,"usgs":true,"family":"Foley","given":"Nora","email":"nfoley@usgs.gov","middleInitial":"K.","affiliations":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":651207,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70182779,"text":"70182779 - 2017 - Migratory delay leads to reduced passage success of Atlantic salmon smolts at a hydroelectric dam","interactions":[],"lastModifiedDate":"2017-09-11T13:00:05","indexId":"70182779","displayToPublicDate":"2016-10-10T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1471,"text":"Ecology of Freshwater Fish","active":true,"publicationSubtype":{"id":10}},"title":"Migratory delay leads to reduced passage success of Atlantic salmon smolts at a hydroelectric dam","docAbstract":"<p><span>Passage of fish through hydropower dams is associated with mortality, delay, increased energy expenditure and migratory failure for migrating fish and the need for remedial measures for both upstream and downstream migration is widely recognised. A functional fish passage must ensure safe and timely passage routes that a substantial portion of migrating fish will use. Passage solutions must address not only the number or percentage of fish that successfully pass a barrier, but also the time it takes to pass. Here, we used radiotelemetry to study the functionality of a fish bypass for downstream-migrating wild-caught and hatchery-released Atlantic salmon smolts. We used time-to-event analysis to model the influence of fish characteristics and environmental variables on the rates of a series of events associated with dam passage. Among the modelled events were approach rate to the bypass entry zone, retention rates in both the forebay and the entry zone and passage rates. Despite repeated attempts, only 65% of the tagged fish present in the forebay passed the dam. Fish passed via the bypass (33%), via spill (18%) and via turbines (15%). Discharge was positively related to approach, passage and retention rates. We did not detect any differences between wild and hatchery fish. Even though individual fish visited the forebay and the entry zone on multiple occasions, most fish passed during the first exposures to these zones. This study underscores the importance of timeliness to passage success and the usefulness of time-to-event analysis for understanding factors governing passage performance.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/eff.12318","usgsCitation":"Nyqvist, D., Greenberg, L., Goerig, E., Calles, O., Bergman, E., Ardren, W.R., and Castro-Santos, T.R., 2017, Migratory delay leads to reduced passage success of Atlantic salmon smolts at a hydroelectric dam: Ecology of Freshwater Fish, v. 26, no. 4, p. 707-718, https://doi.org/10.1111/eff.12318.","productDescription":"12 p.","startPage":"707","endPage":"718","ipdsId":"IP-074189","costCenters":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"links":[{"id":336750,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"26","issue":"4","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-10","publicationStatus":"PW","scienceBaseUri":"58b7eba5e4b01ccd5500bafb","contributors":{"authors":[{"text":"Nyqvist, Daniel","contributorId":184175,"corporation":false,"usgs":false,"family":"Nyqvist","given":"Daniel","email":"","affiliations":[],"preferred":false,"id":673719,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Greenberg, L.","contributorId":184176,"corporation":false,"usgs":false,"family":"Greenberg","given":"L.","email":"","affiliations":[],"preferred":false,"id":673720,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Goerig, E.","contributorId":184177,"corporation":false,"usgs":false,"family":"Goerig","given":"E.","affiliations":[],"preferred":false,"id":673721,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Calles, O.","contributorId":184178,"corporation":false,"usgs":false,"family":"Calles","given":"O.","email":"","affiliations":[],"preferred":false,"id":673722,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Bergman, E.","contributorId":184179,"corporation":false,"usgs":false,"family":"Bergman","given":"E.","email":"","affiliations":[],"preferred":false,"id":673723,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Ardren, William R.","contributorId":184180,"corporation":false,"usgs":false,"family":"Ardren","given":"William","email":"","middleInitial":"R.","affiliations":[{"id":6654,"text":"USFWS","active":true,"usgs":false}],"preferred":false,"id":673724,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Castro-Santos, Theodore R. 0000-0003-2575-9120 tcastrosantos@usgs.gov","orcid":"https://orcid.org/0000-0003-2575-9120","contributorId":3321,"corporation":false,"usgs":true,"family":"Castro-Santos","given":"Theodore","email":"tcastrosantos@usgs.gov","middleInitial":"R.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":673718,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70182722,"text":"70182722 - 2017 - Logging impacts on avian species richness and composition differ across latitudes relative to foraging and breeding habitat preferences","interactions":[],"lastModifiedDate":"2017-07-10T14:59:17","indexId":"70182722","displayToPublicDate":"2016-10-10T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1023,"text":"Biological Reviews","active":true,"publicationSubtype":{"id":10}},"title":"Logging impacts on avian species richness and composition differ across latitudes relative to foraging and breeding habitat preferences","docAbstract":"<p><span>Understanding the causes underlying changes in species diversity is a fundamental pursuit of ecology. Animal species richness and composition often change with decreased forest structural complexity associated with logging. Yet differences in latitude and forest type may strongly influence how species diversity responds to logging. We performed a meta-analysis of logging effects on local species richness and composition of birds across the world and assessed responses by different guilds (nesting strata, foraging strata, diet, and body size). This approach allowed identification of species attributes that might underlie responses to this anthropogenic disturbance. We only examined studies that allowed forests to regrow naturally following logging, and accounted for logging intensity, spatial extent, successional regrowth after logging, and the change in species composition expected due to random assembly from regional species pools. Selective logging in the tropics and clearcut logging in temperate latitudes caused loss of species from nearly all forest strata (ground to canopy), leading to substantial declines in species richness (up to 27% of species). Few species were lost or gained following any intensity of logging in lower-latitude temperate forests, but the relative abundances of these species changed substantially. Selective logging at higher-temperate latitudes generally replaced late-successional specialists with early-successional specialists, leading to no net changes in species richness but large changes in species composition. Removing less basal area during logging mitigated the loss of avian species from all forests and, in some cases, increased diversity in temperate forests. This meta-analysis provides insights into the important role of habitat specialization in determining differential responses of animal communities to logging across tropical and temperate latitudes.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/brv.12300","usgsCitation":"LaManna, J.A., and Martin, T.E., 2017, Logging impacts on avian species richness and composition differ across latitudes relative to foraging and breeding habitat preferences: Biological Reviews, v. 92, no. 3, p. 1657-1674, https://doi.org/10.1111/brv.12300.","productDescription":"18 p.","startPage":"1657","endPage":"1674","ipdsId":"IP-070083","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":336291,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"92","issue":"3","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-10","publicationStatus":"PW","scienceBaseUri":"58b548bee4b01ccd54fddfac","contributors":{"authors":[{"text":"LaManna, Joseph A.","contributorId":171738,"corporation":false,"usgs":false,"family":"LaManna","given":"Joseph","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":673498,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Martin, Thomas E. 0000-0002-4028-4867 tmartin@usgs.gov","orcid":"https://orcid.org/0000-0002-4028-4867","contributorId":1208,"corporation":false,"usgs":true,"family":"Martin","given":"Thomas","email":"tmartin@usgs.gov","middleInitial":"E.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":673455,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70182797,"text":"70182797 - 2017 - Channel-planform evolution in four rivers of Olympic National Park, Washington, U.S.A.: The roles of physical drivers and trophic cascades","interactions":[],"lastModifiedDate":"2017-12-04T11:41:40","indexId":"70182797","displayToPublicDate":"2016-10-06T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1425,"text":"Earth Surface Processes and Landforms","active":true,"publicationSubtype":{"id":10}},"title":"Channel-planform evolution in four rivers of Olympic National Park, Washington, U.S.A.: The roles of physical drivers and trophic cascades","docAbstract":"Identifying the relative contributions of physical and ecological processes to channel evolution remains a substantial challenge in fluvial geomorphology. We use a 74-year aerial photographic record of the Hoh, Queets, Quinault, and Elwha Rivers, Olympic National Park, Washington, U.S.A., to investigate whether physical or trophic-cascade-driven ecological factors—excessive elk impacts after wolves were extirpated a century ago—are the dominant controls on channel planform of these gravel-bed rivers. We find that channel width and braiding show strong relationships with recent flood history. All four rivers have widened significantly in recent decades, consistent with increased flood activity since the 1970s. Channel planform also reflects sediment-supply changes, evident from landslide response on the Elwha River. We surmise that the Hoh River, which shows a multi-decadal trend toward greater braiding, is adjusting to increased sediment supply associated with rapid glacial retreat. In this sediment-routing system with high connectivity, such climate-driven signals appear to propagate downstream without being buffered substantially by sediment storage. Legacy effects of anthropogenic modification likely also affect the Quinault River planform. \nWe infer no correspondence between channel geomorphic evolution and elk abundance, suggesting that trophic-cascade effects in this setting are subsidiary to physical controls on channel morphology. Our findings differ from previous interpretations of Olympic National Park fluvial dynamics and contrast with the classic example of Yellowstone National Park, where legacy effects of elk overuse are apparent in channel morphology; we attribute these differences to hydrologic regime and large-wood availability.","language":"English","publisher":"Wiley","doi":"10.1002/esp.4048","usgsCitation":"East, A., Jenkins, K.J., Happe, P.J., Bountry, J.A., Beechie, T.J., Mastin, M.C., Sankey, J.B., and Randle, T.J., 2017, Channel-planform evolution in four rivers of Olympic National Park, Washington, U.S.A.: The roles of physical drivers and trophic cascades: Earth Surface Processes and Landforms, v. 42, no. 7, p. 1011-1032, https://doi.org/10.1002/esp.4048.","productDescription":"22 p.","startPage":"1011","endPage":"1032","ipdsId":"IP-073218","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true},{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":470218,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://repository.library.noaa.gov/view/noaa/62439","text":"External Repository"},{"id":336777,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Washington","otherGeospatial":"Olympic National Park ","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -124.354248046875,\n              48.28684818710906\n            ],\n            [\n              -124.43664550781249,\n              48.30877444352327\n            ],\n            [\n              -124.71679687499999,\n              48.246625590713826\n            ],\n            [\n              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aeast@usgs.gov","orcid":"https://orcid.org/0000-0002-9567-9460","contributorId":168538,"corporation":false,"usgs":true,"family":"East","given":"Amy E.","email":"aeast@usgs.gov","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true},{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":false,"id":673780,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jenkins, Kurt J. 0000-0003-1415-6607 kurt_jenkins@usgs.gov","orcid":"https://orcid.org/0000-0003-1415-6607","contributorId":3415,"corporation":false,"usgs":true,"family":"Jenkins","given":"Kurt","email":"kurt_jenkins@usgs.gov","middleInitial":"J.","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true},{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":673781,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Happe, Patricia J.","contributorId":177053,"corporation":false,"usgs":false,"family":"Happe","given":"Patricia","email":"","middleInitial":"J.","affiliations":[{"id":20307,"text":"US National Park Service","active":true,"usgs":false}],"preferred":false,"id":673782,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Bountry, Jennifer A.","contributorId":30114,"corporation":false,"usgs":false,"family":"Bountry","given":"Jennifer","email":"","middleInitial":"A.","affiliations":[{"id":7183,"text":"U.S. Bureau of Reclamation","active":true,"usgs":false}],"preferred":false,"id":673783,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Beechie, Timothy J.","contributorId":139468,"corporation":false,"usgs":false,"family":"Beechie","given":"Timothy","email":"","middleInitial":"J.","affiliations":[{"id":6578,"text":"National Marine Fisheries Service, Seattle, WA 98112, USA","active":true,"usgs":false}],"preferred":false,"id":673784,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Mastin, Mark C. 0000-0003-4018-7861 mcmastin@usgs.gov","orcid":"https://orcid.org/0000-0003-4018-7861","contributorId":1652,"corporation":false,"usgs":true,"family":"Mastin","given":"Mark","email":"mcmastin@usgs.gov","middleInitial":"C.","affiliations":[{"id":622,"text":"Washington Water Science Center","active":true,"usgs":true}],"preferred":true,"id":673786,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Sankey, Joel B. 0000-0003-3150-4992 jsankey@usgs.gov","orcid":"https://orcid.org/0000-0003-3150-4992","contributorId":3935,"corporation":false,"usgs":true,"family":"Sankey","given":"Joel","email":"jsankey@usgs.gov","middleInitial":"B.","affiliations":[{"id":568,"text":"Southwest Biological Science 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