{"pageNumber":"1042","pageRowStart":"26025","pageSize":"25","recordCount":184717,"records":[{"id":70179599,"text":"70179599 - 2016 - Defining resilience: A preliminary integrative literature review","interactions":[],"lastModifiedDate":"2017-01-06T14:04:07","indexId":"70179599","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"Defining resilience: A preliminary integrative literature review","docAbstract":"The term “resilience” is ubiquitous in technical literature; it appears in numerous forms, such as resilience, resiliency, or resilient, and each use may have a different definition depending on the interpretation of the writer. This creates difficulties in understanding what is meant by ‘resilience’ in any given use case, especially in discussions of interdisciplinary research. To better understand this problem, this research constructs a preliminary integrative literature review to map different definitions, applications and calculation methods of resilience invoked within critical infrastructure applications. The preliminary review uses a State-of-the-Art Matrix (SAM) analysis to characterize differences in definition across disciplines and between regions. Qualifying the various usages of resilience will produce a greater precision in the literature and a deeper insight into types of data required for its evaluation, particularly with respect to critical infrastructure calculations and how such data may be analyzed. Results from this SAM analysis will create a framework of key concepts as part of the most common applications for “resilient critical infrastructure” modeling.","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Proceedings of the American Society for Engineering Management 2016","largerWorkSubtype":{"id":12,"text":"Conference publication"},"language":"English","publisher":"American Society for Engineering Management","usgsCitation":"Wilt, B., Long, S.K., and Shoberg, T.G., 2016, Defining resilience: A preliminary integrative literature review, in Proceedings of the American Society for Engineering Management 2016, 10 p.","productDescription":"10 p.","ipdsId":"IP-076921","costCenters":[{"id":5074,"text":"Center for Geospatial Information Science (CEGIS)","active":true,"usgs":true}],"links":[{"id":332951,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58772079e4b0315b4c11fe32","contributors":{"authors":[{"text":"Wilt, Bonnie","contributorId":178032,"corporation":false,"usgs":false,"family":"Wilt","given":"Bonnie","email":"","affiliations":[],"preferred":false,"id":657821,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Long, Suzanna K.","contributorId":146270,"corporation":false,"usgs":false,"family":"Long","given":"Suzanna","email":"","middleInitial":"K.","affiliations":[{"id":16655,"text":"Dept. of Engineering Management and Systems Engineering, Missouri University of Science and Technology, Rolla, MO","active":true,"usgs":false}],"preferred":false,"id":657822,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Shoberg, Thomas G. 0000-0003-0173-1246 tshoberg@usgs.gov","orcid":"https://orcid.org/0000-0003-0173-1246","contributorId":3764,"corporation":false,"usgs":true,"family":"Shoberg","given":"Thomas","email":"tshoberg@usgs.gov","middleInitial":"G.","affiliations":[{"id":5074,"text":"Center for Geospatial Information Science (CEGIS)","active":true,"usgs":true}],"preferred":true,"id":657820,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}} ,{"id":70179631,"text":"70179631 - 2016 - Large-scale recovery of an endangered amphibian despite ongoing exposure to multiple stressors","interactions":[],"lastModifiedDate":"2017-01-10T11:34:29","indexId":"70179631","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3165,"text":"Proceedings of the National Academy of Sciences of the United States of America","active":true,"publicationSubtype":{"id":10}},"title":"Large-scale recovery of an endangered amphibian despite ongoing exposure to multiple stressors","docAbstract":"

Amphibians are one of the most threatened animal groups, with 32% of species at risk for extinction. Given this imperiled status, is the disappearance of a large fraction of the Earth’s amphibians inevitable, or are some declining species more resilient than is generally assumed? We address this question in a species that is emblematic of many declining amphibians, the endangered Sierra Nevada yellow-legged frog (Rana sierrae). Based on >7,000 frog surveys conducted across Yosemite National Park over a 20-y period, we show that, after decades of decline and despite ongoing exposure to multiple stressors, including introduced fish, the recently emerged disease chytridiomycosis, and pesticides, R. sierrae abundance increased sevenfold during the study and at a rate of 11% per year. These increases occurred in hundreds of populations throughout Yosemite, providing a rare example of amphibian recovery at an ecologically relevant spatial scale. Results from a laboratory experiment indicate that these increases may be in part because of reduced frog susceptibility to chytridiomycosis. The disappearance of nonnative fish from numerous water bodies after cessation of stocking also contributed to the recovery. The large-scale increases in R. sierrae abundance that we document suggest that, when habitats are relatively intact and stressors are reduced in their importance by active management or species’ adaptive responses, declines of some amphibians may be partially reversible, at least at a regional scale. Other studies conducted over similarly large temporal and spatial scales are critically needed to provide insight and generality about the reversibility of amphibian declines at a global scale.

","language":"English","publisher":"National Academy of Sciences","doi":"10.1073/pnas.1600983113","usgsCitation":"Knapp, R.A., Fellers, G.M., Kleeman, P.M., Miller, D.A., Vrendenburg, V.T., Rosenblum, E.B., and Briggs, C.J., 2016, Large-scale recovery of an endangered amphibian despite ongoing exposure to multiple stressors: Proceedings of the National Academy of Sciences of the United States of America, v. 113, no. 42, p. 11889-11894, https://doi.org/10.1073/pnas.1600983113.","productDescription":"6 p.","startPage":"11889","endPage":"11894","ipdsId":"IP-075546","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":470292,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1073/pnas.1600983113","text":"Publisher Index Page"},{"id":333020,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"113","issue":"42","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-03","publicationStatus":"PW","scienceBaseUri":"58760115e4b04eac8e0746d9","chorus":{"doi":"10.1073/pnas.1600983113","url":"http://dx.doi.org/10.1073/pnas.1600983113","publisher":"Proceedings of the National Academy of Sciences","authors":"Knapp Roland A., Fellers Gary M., Kleeman Patrick M., Miller David A. W., Vredenburg Vance T., Rosenblum Erica Bree, Briggs Cheryl J.","journalName":"Proceedings of the National Academy of Sciences","publicationDate":"10/3/2016","publiclyAccessibleDate":"4/18/2017"},"contributors":{"authors":[{"text":"Knapp, Roland A.","contributorId":69901,"corporation":false,"usgs":false,"family":"Knapp","given":"Roland","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":657963,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fellers, Gary M. 0000-0003-4092-0285 gary_fellers@usgs.gov","orcid":"https://orcid.org/0000-0003-4092-0285","contributorId":3150,"corporation":false,"usgs":true,"family":"Fellers","given":"Gary","email":"gary_fellers@usgs.gov","middleInitial":"M.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":657962,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kleeman, Patrick M. 0000-0001-6567-3239 pkleeman@usgs.gov","orcid":"https://orcid.org/0000-0001-6567-3239","contributorId":3948,"corporation":false,"usgs":true,"family":"Kleeman","given":"Patrick","email":"pkleeman@usgs.gov","middleInitial":"M.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":657964,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Miller, David A. W.","contributorId":126732,"corporation":false,"usgs":false,"family":"Miller","given":"David","email":"","middleInitial":"A. W.","affiliations":[{"id":5039,"text":"Department of Environment, Land, and Infrastructure Engineering, Politecnico di Torino, Torino, Italy","active":true,"usgs":false}],"preferred":false,"id":657965,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Vrendenburg, Vance T.","contributorId":178116,"corporation":false,"usgs":false,"family":"Vrendenburg","given":"Vance","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":657966,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Rosenblum, Erica Bree","contributorId":104330,"corporation":false,"usgs":false,"family":"Rosenblum","given":"Erica","email":"","middleInitial":"Bree","affiliations":[{"id":6643,"text":"University of California - Berkeley","active":true,"usgs":false}],"preferred":false,"id":657967,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Briggs, Cheryl J.","contributorId":127721,"corporation":false,"usgs":false,"family":"Briggs","given":"Cheryl","email":"","middleInitial":"J.","affiliations":[{"id":6710,"text":"University of California, Santa Barbara, CA","active":true,"usgs":false}],"preferred":false,"id":657968,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70187400,"text":"70187400 - 2016 - Water isotope systematics: Improving our palaeoclimate interpretations","interactions":[],"lastModifiedDate":"2017-05-01T15:51:05","indexId":"70187400","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3219,"text":"Quaternary Science Reviews","active":true,"publicationSubtype":{"id":10}},"title":"Water isotope systematics: Improving our palaeoclimate interpretations","docAbstract":"

The stable isotopes of oxygen and hydrogen, measured in a variety of archives, are widely used proxies in Quaternary Science. Understanding the processes that control δ18O change have long been a focus of research (e.g. Shackleton and Opdyke, 1973; Talbot, 1990 ; Leng, 2006). Both the dynamics of water isotope cycling and the appropriate interpretation of geological water-isotope proxy time series remain subjects of active research and debate. It is clear that achieving a complete understanding of the isotope systematics for any given archive type, and ideally each individual archive, is vital if these palaeo-data are to be used to their full potential, including comparison with climate model experiments of the past. Combining information from modern monitoring and process studies, climate models, and proxy data is crucial for improving our statistical constraints on reconstructions of past climate variability.

As climate models increasingly incorporate stable water isotope physics, this common language should aid quantitative comparisons between proxy data and climate model output. Water-isotope palaeoclimate data provide crucial metrics for validating GCMs, whereas GCMs provide a tool for exploring the climate variability dominating signals in the proxy data. Several of the studies in this set of papers highlight how collaborations between palaeoclimate experimentalists and modelers may serve to expand the usefulness of palaeoclimate data for climate prediction in future work.

This collection of papers follows the session on Water Isotope Systematics held at the 2013 AGU Fall Meeting in San Francisco. Papers in that session, the breadth of which are represented here, discussed such issues as; understanding sub-GNIP scale (Global Network for Isotopes in Precipitation, (IAEA/WMO, 2006)) variability in isotopes in precipitation from different regions, detailed examination of the transfer of isotope signals from precipitation to geological archives, and the implications of advances in understanding in these areas for the interpretation of palaeo records and proxy data – climate model comparison.

Here, we briefly review these areas of research, and discuss challenges for the water isotope community in improving our ability to partition climate vs. auxiliary signals in palaeoclimate data.

","language":"English","publisher":"Elsevier","doi":"10.1016/j.quascirev.2015.11.014","usgsCitation":"Jones, M.D., Dee, S., Anderson, L., Baker, A., Bowen, G., and Noone, D., 2016, Water isotope systematics: Improving our palaeoclimate interpretations: Quaternary Science Reviews, v. 131, no. B, p. 243-249, https://doi.org/10.1016/j.quascirev.2015.11.014.","productDescription":"7 p.","startPage":"243","endPage":"249","ipdsId":"IP-071594","costCenters":[{"id":318,"text":"Geosciences and Environmental Change Science Center","active":true,"usgs":true}],"links":[{"id":470291,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.1016/j.quascirev.2015.11.014","text":"External Repository"},{"id":340706,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"131","issue":"B","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59084923e4b0fc4e448ffd44","contributors":{"authors":[{"text":"Jones, M. D.","contributorId":191681,"corporation":false,"usgs":false,"family":"Jones","given":"M.","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":693843,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dee, S.","contributorId":191682,"corporation":false,"usgs":false,"family":"Dee","given":"S.","email":"","affiliations":[],"preferred":false,"id":693844,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Anderson, L.","contributorId":22571,"corporation":false,"usgs":false,"family":"Anderson","given":"L.","affiliations":[],"preferred":false,"id":693845,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Baker, A.","contributorId":191683,"corporation":false,"usgs":false,"family":"Baker","given":"A.","affiliations":[],"preferred":false,"id":693846,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Bowen, G.","contributorId":191684,"corporation":false,"usgs":false,"family":"Bowen","given":"G.","email":"","affiliations":[],"preferred":false,"id":693847,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Noone, D.","contributorId":26916,"corporation":false,"usgs":true,"family":"Noone","given":"D.","email":"","affiliations":[],"preferred":false,"id":693848,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}} ,{"id":70187383,"text":"70187383 - 2016 - Space and habitat use by breeding Golden-winged Warblers in the central Appalachian Mountains","interactions":[],"lastModifiedDate":"2020-08-20T20:08:48.222369","indexId":"70187383","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"seriesTitle":{"id":5103,"text":"Studies in Avian Biology","printIssn":"0197-9922","active":true,"publicationSubtype":{"id":24}},"chapter":"5","title":"Space and habitat use by breeding Golden-winged Warblers in the central Appalachian Mountains","docAbstract":"

Spot-mapping, or recording locations of observed use by territorial songbirds, is often used to delineate core breeding territories. However, a recent radiotelemetry study in Minnesota found that male Golden-winged Warblers (Vermivora chrysoptera) occurring in high-density populations used resources outside their spot-mapped territories. We compared differences in space use and quantified vegetation characteristics in territories and home ranges of individual male Golden-winged Warblers that we monitored using both spot-mapping and radiotelemetry. Our study sites in Pennsylvania and West Virginia had lower population density than in Minnesota. We recorded 524 telemetry locations among 12 male Golden-winged Warblers in Pennsylvania and 488 telemetry locations among seven males in West Virginia. Telemetry-delineated home ranges (100% and 50% minimum convex polygons [MCPs]) were two to four times larger than spot-mapped territories. Spot-mapped territories had minimal overlap among individual males, but home ranges had extensive space-use overlap in both the number and amount of MCP overlap among several males. Forty percent of telemetry locations were outside of spot-mapped territories. Sapling abundance was greater in home ranges (mean 22.5 saplings ± 2.1 SE) than spot-mapped territories in Pennsylvania (11.8 ± 1.9). In managed pastures of West Virginia, tree abundance was greater in home ranges (7.3 trees ± 0.8) than spot-mapped territories (1.9 ± 0.6). More telemetry locations than spot-mapped locations occurred in forest in both states, and telemetry locations were closer to intact forested edges of shrublands than spot-mapped locations in West Virginia. On several occasions, we observed radiomarked individuals >200 m (maximum of 1.5 km) from their MCP spot-mapped territory boundaries. Why Golden-winged Warblers leave their spot-mapped territories is unknown, but our observations suggest foraging, forays for extra-pair mating, and reconnaissance for postbreeding movements as possible motives. Our results from areas with low Golden-winged Warbler territory densities are similar to patterns reported for a high-density population in Minnesota. Ultimately, spot-mapping alone does not accurately reflect space use of Golden-winged Warblers during the breeding season, nor does it characterize all cover types used even in areas with relatively low territory densities. Current conservation plans for Golden-winged Warblers that are based on habitat characteristics measured within spot-mapped territories or at the landscape scale may not adequately incorporate space use at intermediate spatial scales of clusters of territories or home ranges.

","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Golden-winged Warbler ecology, conservation, and habitat management (Studies in Avian Biology, volume 49)","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"CRC Press","publisherLocation":"Boca Raton, FL","isbn":"978-1-4822-4068-9","usgsCitation":"Frantz, M.W., Aldinger, K.R., Wood, P., Duchamp, J., Nuttle, T., Vitz, A., and Larkin, J.L., 2016, Space and habitat use by breeding Golden-winged Warblers in the central Appalachian Mountains, chap. 5 of Golden-winged Warbler ecology, conservation, and habitat management (Studies in Avian Biology, volume 49): Studies in Avian Biology, v. 49, p. 81-94.","productDescription":"14 p.","startPage":"81","endPage":"94","ipdsId":"IP-052257","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":340661,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":340660,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://hdl.handle.net/11299/189700"}],"volume":"49","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59084925e4b0fc4e448ffd46","contributors":{"authors":[{"text":"Frantz, Mack W.","contributorId":191486,"corporation":false,"usgs":false,"family":"Frantz","given":"Mack","email":"","middleInitial":"W.","affiliations":[{"id":34542,"text":"Department of Biology. Indiana University of Pennsylvania","active":true,"usgs":false},{"id":34541,"text":"West Virginia Cooperative Fish and Wildlife Research Unit","active":true,"usgs":false}],"preferred":false,"id":693706,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Aldinger, Kyle R.","contributorId":171892,"corporation":false,"usgs":false,"family":"Aldinger","given":"Kyle","email":"","middleInitial":"R.","affiliations":[{"id":34541,"text":"West Virginia Cooperative Fish and Wildlife Research Unit","active":true,"usgs":false},{"id":12432,"text":"West Virginia University","active":true,"usgs":false}],"preferred":false,"id":693707,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wood, Petra pbwood@usgs.gov","contributorId":169812,"corporation":false,"usgs":true,"family":"Wood","given":"Petra","email":"pbwood@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":34541,"text":"West Virginia Cooperative Fish and Wildlife Research Unit","active":true,"usgs":false}],"preferred":false,"id":693705,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Duchamp, Joseph","contributorId":191655,"corporation":false,"usgs":false,"family":"Duchamp","given":"Joseph","email":"","affiliations":[{"id":34542,"text":"Department of Biology. Indiana University of Pennsylvania","active":true,"usgs":false}],"preferred":false,"id":693708,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Nuttle, Timothy","contributorId":191656,"corporation":false,"usgs":false,"family":"Nuttle","given":"Timothy","email":"","affiliations":[{"id":34543,"text":"Civil and Environmental Consultants, Inc.","active":true,"usgs":false}],"preferred":false,"id":693709,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Vitz, Andrew","contributorId":191657,"corporation":false,"usgs":false,"family":"Vitz","given":"Andrew","email":"","affiliations":[{"id":16900,"text":"Massachusetts Division of Fisheries and Wildlife","active":true,"usgs":false}],"preferred":false,"id":693710,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Larkin, Jeffrey L.","contributorId":169747,"corporation":false,"usgs":false,"family":"Larkin","given":"Jeffrey","email":"","middleInitial":"L.","affiliations":[{"id":34542,"text":"Department of Biology. Indiana University of Pennsylvania","active":true,"usgs":false},{"id":17929,"text":"American Bird Conservancy","active":true,"usgs":false}],"preferred":false,"id":693711,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70185044,"text":"70185044 - 2016 - Role for migratory wild birds in the global spread of avian influenza H5N8","interactions":[],"lastModifiedDate":"2017-03-14T11:43:54","indexId":"70185044","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3338,"text":"Science","active":true,"publicationSubtype":{"id":10}},"title":"Role for migratory wild birds in the global spread of avian influenza H5N8","docAbstract":"

Avian influenza viruses affect both poultry production and public health. A subtype H5N8 (clade 2.3.4.4) virus, following an outbreak in poultry in South Korea in January 2014, rapidly spread worldwide in 2014–2015. Our analysis of H5N8 viral sequences, epidemiological investigations, waterfowl migration, and poultry trade showed that long-distance migratory birds can play a major role in the global spread of avian influenza viruses. Further, we found that the hemagglutinin of clade 2.3.4.4 virus was remarkably promiscuous, creating reassortants with multiple neuraminidase subtypes. Improving our understanding of the circumpolar circulation of avian influenza viruses in migratory waterfowl will help to provide early warning of threats from avian influenza to poultry, and potentially human, health.

","language":"English","publisher":"Science","doi":"10.1126/science.aaf8852","usgsCitation":"The Global Consortium for H5N8 and Related Influenza Viruses, and Ip, S., 2016, Role for migratory wild birds in the global spread of avian influenza H5N8: Science, v. 354, no. 6309, p. 213-217, https://doi.org/10.1126/science.aaf8852.","productDescription":"5 p.","startPage":"213","endPage":"217","ipdsId":"IP-074048","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":461989,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"http://hdl.handle.net/20.500.11820/bb70bb06-abbe-4460-9257-788b8db9ac46","text":"Publisher Index Page"},{"id":337491,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"354","issue":"6309","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58c90123e4b0849ce97abcbc","chorus":{"doi":"10.1126/science.aaf8852","url":"http://dx.doi.org/10.1126/science.aaf8852","publisher":"American Association for the Advancement of Science (AAAS)","authors":"undefined undefined","journalName":"Science","publicationDate":"10/13/2016","publiclyAccessibleDate":"10/14/2017"},"contributors":{"authors":[{"text":"The Global Consortium for H5N8 and Related Influenza Viruses","contributorId":189240,"corporation":true,"usgs":false,"organization":"The Global Consortium for H5N8 and Related Influenza Viruses","id":684199,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ip, S. 0000-0003-4844-7533 hip@usgs.gov","orcid":"https://orcid.org/0000-0003-4844-7533","contributorId":727,"corporation":false,"usgs":true,"family":"Ip","given":"S.","email":"hip@usgs.gov","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":684060,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}} ,{"id":70188149,"text":"70188149 - 2016 - Arctic Research Plan: FY2017-2021","interactions":[],"lastModifiedDate":"2017-06-02T12:03:21","indexId":"70188149","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":9,"text":"Other Report"},"title":"Arctic Research Plan: FY2017-2021","docAbstract":"

The United States is an Arctic nation—Americans depend on the Arctic for biodiversity and climate regulation and for natural resources. America’s Arctic—Alaska—is at the forefront of rapid climate, environmental, and socio-economic changes that are testing the resilience and sustainability of communities and ecosystems. Research to increase fundamental understanding of these changes is needed to inform sound, science-based decision- and policy-making and to develop appropriate solutions for Alaska and the Arctic region as a whole.

Created by an Act of Congress in 1984, and since 2010 a subcommittee of the National Science and Technology Council (NSTC) in the Executive Office of the President, the Interagency Arctic Research Policy Committee (IARPC) plays a critical role in advancing scientific knowledge and understanding of the changing Arctic and its impacts far beyond the boundaries of the Arctic. Comprising 14 Federal agencies, offices, and departments, IARPC is responsible for the implementation of a 5-year Arctic Research Plan in consultation with the U.S. Arctic Research Commission, the Governor of the State of Alaska, residents of the Arctic, the private sector, and public interest groups.

","language":"English","publisher":"National Science and Technology Council","usgsCitation":"Starkweather, S., Jeffries, M.O., Stephenson, S., Anderson, R., Jones, B.M., Loehman, R.A., and von Biela, V.R., 2016, Arctic Research Plan: FY2017-2021, vi, 77 p.","productDescription":"vi, 77 p.","numberOfPages":"84","ipdsId":"IP-076185","costCenters":[{"id":113,"text":"Alaska Regional Director's Office","active":true,"usgs":true}],"links":[{"id":342043,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":342042,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.iarpccollaborations.org/plan/index.html"}],"publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59327925e4b0e9bd0eab550f","contributors":{"authors":[{"text":"Starkweather, Sandy","contributorId":192581,"corporation":false,"usgs":false,"family":"Starkweather","given":"Sandy","email":"","affiliations":[],"preferred":false,"id":696912,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jeffries, Martin O","contributorId":192582,"corporation":false,"usgs":false,"family":"Jeffries","given":"Martin","email":"","middleInitial":"O","affiliations":[],"preferred":false,"id":696913,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Stephenson, Simon","contributorId":192583,"corporation":false,"usgs":false,"family":"Stephenson","given":"Simon","email":"","affiliations":[],"preferred":false,"id":696914,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Anderson, Rebecca 0000-0001-6988-6311 rdanderson@usgs.gov","orcid":"https://orcid.org/0000-0001-6988-6311","contributorId":5925,"corporation":false,"usgs":true,"family":"Anderson","given":"Rebecca","email":"rdanderson@usgs.gov","affiliations":[{"id":113,"text":"Alaska Regional Director's Office","active":true,"usgs":true}],"preferred":true,"id":696908,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Jones, Benjamin M. 0000-0002-1517-4711 bjones@usgs.gov","orcid":"https://orcid.org/0000-0002-1517-4711","contributorId":2286,"corporation":false,"usgs":true,"family":"Jones","given":"Benjamin","email":"bjones@usgs.gov","middleInitial":"M.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":118,"text":"Alaska Science Center Geography","active":true,"usgs":true}],"preferred":true,"id":696909,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Loehman, Rachel A. 0000-0001-7680-1865 rloehman@usgs.gov","orcid":"https://orcid.org/0000-0001-7680-1865","contributorId":187605,"corporation":false,"usgs":true,"family":"Loehman","given":"Rachel","email":"rloehman@usgs.gov","middleInitial":"A.","affiliations":[{"id":118,"text":"Alaska Science Center Geography","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":false,"id":696910,"contributorType":{"id":1,"text":"Authors"},"rank":20},{"text":"von Biela, Vanessa R. 0000-0002-7139-5981 vvonbiela@usgs.gov","orcid":"https://orcid.org/0000-0002-7139-5981","contributorId":3104,"corporation":false,"usgs":true,"family":"von Biela","given":"Vanessa","email":"vvonbiela@usgs.gov","middleInitial":"R.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":120,"text":"Alaska Science Center Water","active":true,"usgs":true}],"preferred":true,"id":696911,"contributorType":{"id":1,"text":"Authors"},"rank":25}]}} ,{"id":70187362,"text":"70187362 - 2016 - Spatially explicit models of full-season productivity and implications for landscape management of Golden-winged Warblers in the western Great Lakes Region","interactions":[],"lastModifiedDate":"2020-08-20T20:11:21.12311","indexId":"70187362","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"seriesTitle":{"id":5103,"text":"Studies in Avian Biology","printIssn":"0197-9922","active":true,"publicationSubtype":{"id":24}},"chapter":"9","title":"Spatially explicit models of full-season productivity and implications for landscape management of Golden-winged Warblers in the western Great Lakes Region","docAbstract":"

The relationship between landscape structure and composition and full-season productivity (FSP) is poorly understood for most birds. For species of high conservation concern, insight into how productivity is related to landscape structure and composition can be used to develop more effective conservation strategies that increase recruitment. We monitored nest productivity and fledgling survival of Golden-winged Warblers (Vermivora chrysoptera), a species of high conservation concern, in managed forest landscapes at two sites in northern Minnesota, and one site in southeastern Manitoba, Canada from 2010 to 2012. We used logistic exposure models to identify the influence of landscape structure and composition on nest productivity and fledgling survival. We used the models to predict spatially explicit, FSP across our study sites to identify areas of low relative productivity that could be targeted for management. We then used our models of spatially explicit, FSP to simulate the impact of potential management actions on our study sites with the goal of increasing total population productivity. Unlike previous studies that suggested wetland cover types provide higher quality breeding habitat for Golden-winged Warblers, our models predicted 14% greater productivity in upland cover types. Simulated succession of a 9-ha grassland patch to a shrubby upland suitable for nesting increased the total number of fledglings produced by that patch and adjacent upland shrublands by 30%, despite decreasing individual productivity by 13%. Further simulated succession of the same patch described above into deciduous forest reduced the total number of fledglings produced to independence on a landscape by 18% because of a decrease in the area available for nesting. Simulated reduction in the cumulative length of shrubby edge within a 50-m radius of any location in our landscapes from 0.6 to 0.3 km increased FSP by 5%. Our models demonstrated that the effects of any single management action depended on the context of the surrounding landscape. We conclude that spatially explicit, FSP models that incorporate data from both the nesting and postfledging periods are useful for informing breeding habitat management plans for Golden-winged Warblers and that similar models can benefit management planning for
many other species of conservation concern.

","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Golden-winged Warbler ecology, conservation, and habitat management (Studies in Avian Biology, volume 49)","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"CRC Press","publisherLocation":"Boca Raton, FL","isbn":"978-1-4822-4068-9","usgsCitation":"Peterson, S.M., Streby, H.M., and Andersen, D., 2016, Spatially explicit models of full-season productivity and implications for landscape management of Golden-winged Warblers in the western Great Lakes Region, chap. 9 of Golden-winged Warbler ecology, conservation, and habitat management (Studies in Avian Biology, volume 49): Studies in Avian Biology, v. 49, p. 141-160.","productDescription":"20 p.","startPage":"141","endPage":"160","ipdsId":"IP-052068","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":340654,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":340653,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://hdl.handle.net/11299/189700"}],"volume":"49","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59084925e4b0fc4e448ffd48","contributors":{"authors":[{"text":"Peterson, Sean M.","contributorId":9354,"corporation":false,"usgs":false,"family":"Peterson","given":"Sean","email":"","middleInitial":"M.","affiliations":[{"id":13013,"text":"Department of Environmental Science, Policy and Management, University of California, Berkeley","active":true,"usgs":false},{"id":34539,"text":"Minnesota Cooperative Fish and Wildlife Research Unit","active":true,"usgs":false}],"preferred":false,"id":693698,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Streby, Henry M.","contributorId":11024,"corporation":false,"usgs":false,"family":"Streby","given":"Henry","email":"","middleInitial":"M.","affiliations":[{"id":12455,"text":"University of Toledo","active":true,"usgs":false}],"preferred":false,"id":693699,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Andersen, David E. 0000-0001-9535-3404 dea@usgs.gov","orcid":"https://orcid.org/0000-0001-9535-3404","contributorId":2168,"corporation":false,"usgs":true,"family":"Andersen","given":"David E.","email":"dea@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":34539,"text":"Minnesota Cooperative Fish and Wildlife Research Unit","active":true,"usgs":false}],"preferred":true,"id":693611,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}} ,{"id":70179649,"text":"70179649 - 2016 - Environmental variability and population dynamics: Do European and North American ducks play by the same rules?","interactions":[],"lastModifiedDate":"2017-01-10T10:45:02","indexId":"70179649","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1467,"text":"Ecology and Evolution","active":true,"publicationSubtype":{"id":10}},"title":"Environmental variability and population dynamics: Do European and North American ducks play by the same rules?","docAbstract":"

Density dependence, population regulation, and variability in population size are fundamental population processes, the manifestation and interrelationships of which are affected by environmental variability. However, there are surprisingly few empirical studies that distinguish the effect of environmental variability from the effects of population processes. We took advantage of a unique system, in which populations of the same duck species or close ecological counterparts live in highly variable (north American prairies) and in stable (north European lakes) environments, to distinguish the relative contributions of environmental variability (measured as between-year fluctuations in wetland numbers) and intraspecific interactions (density dependence) in driving population dynamics. We tested whether populations living in stable environments (in northern Europe) were more strongly governed by density dependence than populations living in variable environments (in North America). We also addressed whether relative population dynamical responses to environmental variability versus density corresponded to differences in life history strategies between dabbling (relatively “fast species” and governed by environmental variability) and diving (relatively “slow species” and governed by density) ducks. As expected, the variance component of population fluctuations caused by changes in breeding environments was greater in North America than in Europe. Contrary to expectations, however, populations in more stable environments were not less variable nor clearly more strongly density dependent than populations in highly variable environments. Also, contrary to expectations, populations of diving ducks were neither more stable nor stronger density dependent than populations of dabbling ducks, and the effect of environmental variability on population dynamics was greater in diving than in dabbling ducks. In general, irrespective of continent and species life history, environmental variability contributed more to variation in species abundances than did density. Our findings underscore the need for more studies on populations of the same species in different environments to verify the generality of current explanations about population dynamics and its association with species life history.

","language":"English","publisher":"Wiley","doi":"10.1002/ece3.2413","usgsCitation":"Poysa, H., Rintala, J., Johnson, D.H., Kauppinen, J., Lammi, E., Nudds, T.D., and Vaananen, V., 2016, Environmental variability and population dynamics: Do European and North American ducks play by the same rules?: Ecology and Evolution, v. 6, no. 19, p. 7004-7014, https://doi.org/10.1002/ece3.2413.","productDescription":"11 p.","startPage":"7004","endPage":"7014","ipdsId":"IP-078795","costCenters":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":470281,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/ece3.2413","text":"Publisher Index Page"},{"id":333010,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"6","issue":"19","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"noUsgsAuthors":false,"publicationDate":"2016-09-09","publicationStatus":"PW","scienceBaseUri":"58760114e4b04eac8e0746d7","contributors":{"authors":[{"text":"Poysa, Hannu","contributorId":178160,"corporation":false,"usgs":false,"family":"Poysa","given":"Hannu","email":"","affiliations":[],"preferred":false,"id":658082,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rintala, Jukka","contributorId":178161,"corporation":false,"usgs":false,"family":"Rintala","given":"Jukka","email":"","affiliations":[],"preferred":false,"id":658083,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Johnson, Douglas H. 0000-0002-7778-6641 douglas_h_johnson@usgs.gov","orcid":"https://orcid.org/0000-0002-7778-6641","contributorId":1387,"corporation":false,"usgs":true,"family":"Johnson","given":"Douglas","email":"douglas_h_johnson@usgs.gov","middleInitial":"H.","affiliations":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":658058,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kauppinen, Jukka","contributorId":178162,"corporation":false,"usgs":false,"family":"Kauppinen","given":"Jukka","email":"","affiliations":[],"preferred":false,"id":658084,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Lammi, Esa","contributorId":178163,"corporation":false,"usgs":false,"family":"Lammi","given":"Esa","email":"","affiliations":[],"preferred":false,"id":658085,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Nudds, Thomas D.","contributorId":178164,"corporation":false,"usgs":false,"family":"Nudds","given":"Thomas","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":658086,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Vaananen, Veli-Matti","contributorId":178165,"corporation":false,"usgs":false,"family":"Vaananen","given":"Veli-Matti","email":"","affiliations":[],"preferred":false,"id":658087,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70178796,"text":"70178796 - 2016 - Streamflow data","interactions":[],"lastModifiedDate":"2017-11-16T13:19:45","indexId":"70178796","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"Streamflow data","docAbstract":"

The importance of streamflow data to the world’s economy, environmental health, and public safety continues to grow as the population increases. The collection of streamflow data is often an involved and complicated process. The quality of streamflow data hinges on such things as site selection, instrumentation selection, streamgage maintenance and quality assurance, proper discharge measurement techniques, and the development and continued verification of the streamflow rating. This chapter serves only as an overview of the streamflow data collection process as proper treatment of considerations, techniques, and quality assurance cannot be addressed adequately in the space limitations of this chapter. Readers with the need for the detailed information on the streamflow data collection process are referred to the many references noted in this chapter. 

","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Handbook of Applied Hydrology","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"McGraw-Hill","publisherLocation":"New York, NY","usgsCitation":"Holmes, R.R., 2016, Streamflow data, chap. of Handbook of Applied Hydrology, p. 5-1-5-7.","productDescription":"7 p.","startPage":"5-1","endPage":"5-7","ipdsId":"IP-062503","costCenters":[{"id":502,"text":"Office of Surface Water","active":true,"usgs":true}],"links":[{"id":333133,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":348997,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://www.mhprofessional.com/9780071835091-usa-handbook-of-applied-hydrology-second-edition-group"}],"edition":"Second edition","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5878a48de4b04df303d95818","contributors":{"editors":[{"text":"Singh, Vijay P.","contributorId":176741,"corporation":false,"usgs":false,"family":"Singh","given":"Vijay","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":722463,"contributorType":{"id":2,"text":"Editors"},"rank":1}],"authors":[{"text":"Holmes, Robert R. Jr. 0000-0002-5060-3999 bholmes@usgs.gov","orcid":"https://orcid.org/0000-0002-5060-3999","contributorId":1624,"corporation":false,"usgs":true,"family":"Holmes","given":"Robert","suffix":"Jr.","email":"bholmes@usgs.gov","middleInitial":"R.","affiliations":[{"id":502,"text":"Office of Surface Water","active":true,"usgs":true}],"preferred":false,"id":722440,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}} ,{"id":70190674,"text":"70190674 - 2016 - Effects of flow regime on metal concentrations and the attainment of water quality standards in a remediated stream reach, Butte, Montana","interactions":[],"lastModifiedDate":"2018-08-09T12:11:51","indexId":"70190674","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1565,"text":"Environmental Science & Technology","onlineIssn":"1520-5851","printIssn":"0013-936X","active":true,"publicationSubtype":{"id":10}},"title":"Effects of flow regime on metal concentrations and the attainment of water quality standards in a remediated stream reach, Butte, Montana","docAbstract":"

Low-flow synoptic sampling campaigns are often used as the primary tool to characterize watersheds affected by mining. Although such campaigns are an invaluable part of site characterization, investigations which focus solely on low-flow conditions may yield misleading results. The objective of this paper is to demonstrate this point and elucidate the mechanisms responsible for the release of metals during rainfall runoff. This objective is addressed using data from diel and synoptic sampling campaigns conducted over a two-day period. Low-flow synoptic sampling results indicate that concentrations of most constituents meet aquatic standards. This finding is in contrast to findings from a diel sampling campaign that captured dramatic increases in concentrations during rainfall runoff. Concentrations during the rising limb of the hydrograph were 2–23 times concentrations observed during synoptic sampling (most increases were >10-fold), remaining elevated during the receding limb of the hydrograph to produce a clockwise hysteresis loop. Hydrologic mechanisms responsible for the release of metals include increased transport due to resuspension of streambed solids, erosion of alluvial tailings, and overland flow. Rainfall also elevated the alluvial groundwater table and increased infiltration through the vadose zone, likely resulting in dissolution from alluvial tailings that were dry prior to the event.

","language":"English","publisher":"ACS","doi":"10.1021/acs.est.6b03190","usgsCitation":"Runkel, R.L., Kimball, B.A., Nimick, D.A., and Walton-Day, K., 2016, Effects of flow regime on metal concentrations and the attainment of water quality standards in a remediated stream reach, Butte, Montana: Environmental Science & Technology, v. 50, no. 23, p. 12641-12649, https://doi.org/10.1021/acs.est.6b03190.","productDescription":"9 p.","startPage":"12641","endPage":"12649","ipdsId":"IP-077544","costCenters":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true},{"id":589,"text":"Toxic Substances Hydrology Program","active":true,"usgs":true}],"links":[{"id":345641,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Montana","city":"Butte","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"type\": \"Polygon\",\n \"coordinates\": [\n [\n [\n -112.5838565826416,\n 45.986526035337306\n ],\n [\n -112.5182819366455,\n 45.986526035337306\n ],\n [\n -112.5182819366455,\n 46.005606753418796\n ],\n [\n -112.5838565826416,\n 46.005606753418796\n ],\n [\n -112.5838565826416,\n 45.986526035337306\n ]\n ]\n ]\n }\n }\n ]\n}","volume":"50","issue":"23","noUsgsAuthors":false,"publicationDate":"2016-11-22","publicationStatus":"PW","scienceBaseUri":"59b8f220e4b08b1644e0aef2","contributors":{"authors":[{"text":"Runkel, Robert L. 0000-0003-3220-481X runkel@usgs.gov","orcid":"https://orcid.org/0000-0003-3220-481X","contributorId":685,"corporation":false,"usgs":true,"family":"Runkel","given":"Robert","email":"runkel@usgs.gov","middleInitial":"L.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":710137,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kimball, Briant A. bkimball@usgs.gov","contributorId":533,"corporation":false,"usgs":true,"family":"Kimball","given":"Briant","email":"bkimball@usgs.gov","middleInitial":"A.","affiliations":[{"id":610,"text":"Utah Water Science Center","active":true,"usgs":true}],"preferred":true,"id":710138,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Nimick, David A. dnimick@usgs.gov","contributorId":421,"corporation":false,"usgs":true,"family":"Nimick","given":"David","email":"dnimick@usgs.gov","middleInitial":"A.","affiliations":[{"id":573,"text":"Special Applications Science Center","active":true,"usgs":true},{"id":5050,"text":"WY-MT Water Science Center","active":true,"usgs":true}],"preferred":true,"id":710139,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Walton-Day, Katherine 0000-0002-9146-6193 kwaltond@usgs.gov","orcid":"https://orcid.org/0000-0002-9146-6193","contributorId":1245,"corporation":false,"usgs":true,"family":"Walton-Day","given":"Katherine","email":"kwaltond@usgs.gov","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":false,"id":710140,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70190605,"text":"70190605 - 2016 - A Tour de Force by Hawaii's invasive mammals: establishment, takeover, ecosystem restoration through eradication","interactions":[],"lastModifiedDate":"2018-01-04T08:32:28","indexId":"70190605","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"A Tour de Force by Hawaii's invasive mammals: establishment, takeover, ecosystem restoration through eradication","docAbstract":"Invasive mammals, large and small, have irreversibly altered Hawaii's ecosystems in numerous cases through unnatural herbivory, predation, and the transmission of zoonotic diseases, thereby causing the disproportionate extinction of flora and fauna that occur nowhere else on Earth. The control and eradication of invasive mammals is the single most expensive management activity necessary for restoring ecological integrity to many natural areas of Hawai'i and other Pacific Islands, and has already\nadvanced the restoration of native biota. Science applications supporting management efforts have been shaped by longstanding collaborative federal research programs over the past four decades. Consequently, feral goats have been removed from > l ,3 58 km2, and feral pigs have been removed from >723 km2 of lands in Hawai'i, bringing about the gradual recovery of forest ecosystems. The exclusion of other non-native ungulates and invasive mammals is now being undertaken with more sophisticated control techniques and fences. New fence designs are now capable of excluding feral cats from large areas to protect endangered native waterfowl and\nnesting seabirds. Rodenticides that have been tested and registered for hand and aerial broadcast in Hawai'i have been used to eradicate rats from small offshore islands to protect nesting seabirds and are now being applied to montane environment of larger islands to protect forest birds. Forward-looking infrared radar is also being applied to locate cryptic wild ungulates that were more recently introduced to some islands. All invasive mammals have been eradicated from some smaller islands, resulting in the restoration of some ecosystem processes such as natural forest regeneration, but changes in other processes such as fire regimes and nutrient cycling remain more difficult to reverse at larger landscape scales. It may soon be possible to manage areas on larger islands to be free of invasive mammals at least during seasonally important periods for native species, but at the same time, new mammal introductions continue to occur.","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"27th Vertebrate Pest Conference","largerWorkSubtype":{"id":12,"text":"Conference publication"},"language":"English","publisher":"University of California, Davis","usgsCitation":"Hess, S.C., 2016, A Tour de Force by Hawaii's invasive mammals: establishment, takeover, ecosystem restoration through eradication, in 27th Vertebrate Pest Conference, p. 361-367.","productDescription":"7 p.","startPage":"361","endPage":"367","ipdsId":"IP-080033","costCenters":[{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true}],"links":[{"id":345610,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":345603,"type":{"id":15,"text":"Index Page"},"url":"https://www.vpconference.org/Proceedings_of_the_Vertebrate_Pest_Conference/"}],"country":"United States","state":"Hawaii","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59b76f7de4b08b1644ddfb06","contributors":{"authors":[{"text":"Hess, Steve C. 0000-0001-6403-9922 shess@usgs.gov","orcid":"https://orcid.org/0000-0001-6403-9922","contributorId":150366,"corporation":false,"usgs":true,"family":"Hess","given":"Steve","email":"shess@usgs.gov","middleInitial":"C.","affiliations":[{"id":5049,"text":"Pacific Islands Ecosys Research Center","active":true,"usgs":true},{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true}],"preferred":true,"id":709969,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}} ,{"id":70179630,"text":"70179630 - 2016 - A new biogeographically disjunct giant gecko (Gehyra: Gekkonidae: Reptilia) from the East Melanesian Islands ","interactions":[],"lastModifiedDate":"2017-01-10T11:19:34","indexId":"70179630","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3814,"text":"Zootaxa","onlineIssn":"1175-5334","printIssn":"1175-5326","active":true,"publicationSubtype":{"id":10}},"title":"A new biogeographically disjunct giant gecko (Gehyra: Gekkonidae: Reptilia) from the East Melanesian Islands ","docAbstract":"

The East Melanesian Islands have been a focal area for research into island biogeography and community ecology. However, previously undescribed and biogeographically significant new species endemic to this region continue to be discovered. Here we describe a phylogenetically distinct (~20% divergence at the mitochondrial ND2 gene) and biogeographically disjunct new species of gecko in the genus Gehyra, from the Admiralty and St Matthias Islands. Gehyra rohan sp. nov. can be distinguished from all congeners by the combination of its very large size, ring of bright orange scales around the eye, moderate degree of lateral folding on the limbs and body, and aspects of head, body and tail scalation. Molecular data indicate mid to late Miocene divergence of the new species from nearest relatives occurring nearly 2000 kilometres away in Vanuatu and Fiji. Large Gehyra have not been recorded on the intervening large islands of the Bismark Archipelago (New Britain and New Ireland) and the Solomon Islands, suggesting this dispersal pre-dated the current configuration of these islands, extinction in intervening regions, or potentially elements of both. Conversely, low genetic divergence between disjunct samples on Manus and Mussau implies recent overseas dispersal via either natural or anthropogenic means.

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The Integrated Rangeland Fire Management Strategy (hereafter Strategy, DOI 2015) outlined the need for coordinated, science-based adaptive management to achieve long-term protection, conservation, and restoration of the sagebrush (Artemisia spp.) ecosystem. A key component of this management approach is the identification of knowledge gaps that limit implementation of effective strategies to meet current management challenges. The tasks and actions identified in the Strategy address several broad topics related to management of the sagebrush ecosystem. This science plan is organized around these topics and specifically focuses on fire, invasive plant species and their effects on altering fire regimes, restoration, sagebrush and greater sage-grouse (Centrocercus urophasianus), and climate and weather.

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Southern Research Station, Aiken, SC","active":true,"usgs":false}],"preferred":false,"id":729867,"contributorType":{"id":1,"text":"Authors"},"rank":50},{"text":"Sheley, Roger L.","contributorId":167296,"corporation":false,"usgs":false,"family":"Sheley","given":"Roger","email":"","middleInitial":"L.","affiliations":[{"id":24676,"text":"USDA-ARS, Burns Oregon","active":true,"usgs":false}],"preferred":false,"id":729868,"contributorType":{"id":1,"text":"Authors"},"rank":51},{"text":"Shinneman, Douglas J. dshinneman@usgs.gov","contributorId":4143,"corporation":false,"usgs":true,"family":"Shinneman","given":"Douglas J.","email":"dshinneman@usgs.gov","affiliations":[],"preferred":false,"id":729869,"contributorType":{"id":1,"text":"Authors"},"rank":52},{"text":"Wiechman, Lief A. 0000-0002-3804-4426","orcid":"https://orcid.org/0000-0002-3804-4426","contributorId":184047,"corporation":false,"usgs":true,"family":"Wiechman","given":"Lief","email":"","middleInitial":"A.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":729870,"contributorType":{"id":1,"text":"Authors"},"rank":53},{"text":"Wylie, Bruce K. 0000-0002-7374-1083 wylie@usgs.gov","orcid":"https://orcid.org/0000-0002-7374-1083","contributorId":750,"corporation":false,"usgs":true,"family":"Wylie","given":"Bruce","email":"wylie@usgs.gov","middleInitial":"K.","affiliations":[{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true},{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true}],"preferred":true,"id":729871,"contributorType":{"id":1,"text":"Authors"},"rank":54}]}} ,{"id":70178794,"text":"70178794 - 2016 - Influence of static habitat attributes on local and regional Rocky intertidal community structure","interactions":[],"lastModifiedDate":"2017-06-28T14:51:55","indexId":"70178794","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1584,"text":"Estuaries and Coasts","active":true,"publicationSubtype":{"id":10}},"title":"Influence of static habitat attributes on local and regional Rocky intertidal community structure","docAbstract":"

Rocky intertidal communities are structured by local environmental drivers, which can be dynamic, fluctuating on various temporal scales, or static and not greatly varying across years. We examined the role of six static drivers (distance to freshwater, tidewater glacial presence, wave exposure, fetch, beach slope, and substrate composition) on intertidal community structure across the northern Gulf of Alaska. We hypothesized that community structure is less similar at the local scale compared with the regional scale, coinciding with static drivers being less similar on smaller than larger scales. We also hypothesized that static attributes mainly drive local biological community structure. For this, we surveyed five to six sites in each of the six regions in the mid and low intertidal strata. Across regions, static attributes were not consistently different and only small clusters of sites had similar attributes. Additionally, intertidal communities were less similar on the site compared with the region level. These results suggest that these biological communities are not strongly influenced by the local static attributes measured in this study. An alternative explanation is that static attributes among our regions are not different enough to influence the biological communities. This lack of evidence for a strong static driver may be a result of our site selection, which targeted rocky sheltered communities. This suggests that this habitat may be ideal to examine the influence of dynamic drivers. We recommend that future analyses of dynamic attributes may best be performed after analyses have demonstrated that sites do not differ in static attributes.

","language":"English","publisher":"Springer","doi":"10.1007/s12237-016-0114-0","usgsCitation":"Konar, B., Iken, K., Coletti, H., Monson, D., and Weitzman, B., 2016, Influence of static habitat attributes on local and regional Rocky intertidal community structure: Estuaries and Coasts, v. 39, no. 6, p. 1735-1745, https://doi.org/10.1007/s12237-016-0114-0.","productDescription":"11 p.","startPage":"1735","endPage":"1745","ipdsId":"IP-060190","costCenters":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"links":[{"id":496914,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7513WCB","text":"USGS data release","linkHelpText":"Rocky Intertidal Data from Prince William Sound, Katmai National Park and Preserve, and Kenai Fjords National Park"},{"id":333134,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"39","issue":"6","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-26","publicationStatus":"PW","scienceBaseUri":"5878a48be4b04df303d95804","contributors":{"authors":[{"text":"Konar, B.","contributorId":93658,"corporation":false,"usgs":true,"family":"Konar","given":"B.","email":"","affiliations":[],"preferred":false,"id":658368,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Iken, K.","contributorId":178282,"corporation":false,"usgs":false,"family":"Iken","given":"K.","affiliations":[],"preferred":false,"id":658369,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Coletti, H.","contributorId":178283,"corporation":false,"usgs":false,"family":"Coletti","given":"H.","affiliations":[],"preferred":false,"id":658370,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Monson, Daniel H. 0000-0002-4593-5673 dmonson@usgs.gov","orcid":"https://orcid.org/0000-0002-4593-5673","contributorId":140480,"corporation":false,"usgs":true,"family":"Monson","given":"Daniel H.","email":"dmonson@usgs.gov","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":false,"id":658371,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Weitzman, Ben P. 0000-0001-7559-3654 bweitzman@usgs.gov","orcid":"https://orcid.org/0000-0001-7559-3654","contributorId":5123,"corporation":false,"usgs":true,"family":"Weitzman","given":"Ben P.","email":"bweitzman@usgs.gov","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":658372,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70180015,"text":"70180015 - 2016 - A cytosolic carbonic anhydrase molecular switch occurs in the gills of metamorphic sea lamprey","interactions":[],"lastModifiedDate":"2017-01-23T11:03:10","indexId":"70180015","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3358,"text":"Scientific Reports","active":true,"publicationSubtype":{"id":10}},"title":"A cytosolic carbonic anhydrase molecular switch occurs in the gills of metamorphic sea lamprey","docAbstract":"

Carbonic anhydrase plays a key role in CO2 transport, acid-base and ion regulation and metabolic processes in vertebrates. While several carbonic anhydrase isoforms have been identified in numerous vertebrate species, basal lineages such as the cyclostomes have remained largely unexamined. Here we investigate the repertoire of cytoplasmic carbonic anhydrases in the sea lamprey (Petromyzon marinus), that has a complex life history marked by a dramatic metamorphosis from a benthic filter-feeding ammocoete larvae into a parasitic juvenile which migrates from freshwater to seawater. We have identified a novel carbonic anhydrase gene (ca19) beyond the single carbonic anhydrase gene (ca18) that was known previously. Phylogenetic analysis and synteny studies suggest that both carbonic anhydrase genes form one or two independent gene lineages and are most likely duplicates retained uniquely in cyclostomes. Quantitative PCR of ca19 and ca18 and protein expression in gill across metamorphosis show that the ca19 levels are highest in ammocoetes and decrease during metamorphosis while ca18 shows the opposite pattern with the highest levels in post-metamorphic juveniles. We propose that a unique molecular switch occurs during lamprey metamorphosis resulting in distinct gill carbonic anhydrases reflecting the contrasting life modes and habitats of these life-history stages.

","language":"English","publisher":"Nature","doi":"10.1038/srep33954","usgsCitation":"Ferreira-Martins, D., McCormick, S.D., Campos, A., Lopes-Marques, M., Osorio, H., Coimbra, J., Castro, L., and Wilson, J.M., 2016, A cytosolic carbonic anhydrase molecular switch occurs in the gills of metamorphic sea lamprey: Scientific Reports, v. 6, p. 1-11, https://doi.org/10.1038/srep33954.","productDescription":"Article 33954; 11 p.","startPage":"1","endPage":"11","ipdsId":"IP-068593","costCenters":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"links":[{"id":470288,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1038/srep33954","text":"Publisher Index Page"},{"id":333696,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"6","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2016-10-05","publicationStatus":"PW","scienceBaseUri":"58863a11e4b0cad700058b5b","contributors":{"authors":[{"text":"Ferreira-Martins, D.","contributorId":178547,"corporation":false,"usgs":false,"family":"Ferreira-Martins","given":"D.","affiliations":[],"preferred":false,"id":659765,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"McCormick, Stephen D. 0000-0003-0621-6200 smccormick@usgs.gov","orcid":"https://orcid.org/0000-0003-0621-6200","contributorId":139214,"corporation":false,"usgs":true,"family":"McCormick","given":"Stephen","email":"smccormick@usgs.gov","middleInitial":"D.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":659764,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Campos, A.","contributorId":178549,"corporation":false,"usgs":false,"family":"Campos","given":"A.","email":"","affiliations":[],"preferred":false,"id":659767,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lopes-Marques, M.","contributorId":178550,"corporation":false,"usgs":false,"family":"Lopes-Marques","given":"M.","email":"","affiliations":[],"preferred":false,"id":659768,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Osorio, H.","contributorId":178551,"corporation":false,"usgs":false,"family":"Osorio","given":"H.","email":"","affiliations":[],"preferred":false,"id":659769,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Coimbra, J.","contributorId":178552,"corporation":false,"usgs":false,"family":"Coimbra","given":"J.","affiliations":[],"preferred":false,"id":659770,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Castro, L.F.C.","contributorId":178553,"corporation":false,"usgs":false,"family":"Castro","given":"L.F.C.","email":"","affiliations":[],"preferred":false,"id":659771,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Wilson, Jonthan M","contributorId":178548,"corporation":false,"usgs":false,"family":"Wilson","given":"Jonthan","email":"","middleInitial":"M","affiliations":[],"preferred":false,"id":659766,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}} ,{"id":70179748,"text":"70179748 - 2016 - Landslide hazards and climate change: A perspective from the United States","interactions":[],"lastModifiedDate":"2020-08-20T20:14:17.721443","indexId":"70179748","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"chapter":"14","title":"Landslide hazards and climate change: A perspective from the United States","docAbstract":"

No abstract available. 

","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Slope safety preparedness for impact of climate change","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"CRC Press","doi":"10.1201/9781315387789-16","usgsCitation":"Coe, J.A., 2016, Landslide hazards and climate change: A perspective from the United States, chap. 14 of Slope safety preparedness for impact of climate change, p. 479-523, https://doi.org/10.1201/9781315387789-16.","productDescription":"45 p.","startPage":"479","endPage":"523","ipdsId":"IP-069919","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":333487,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2017-01-12","publicationStatus":"PW","scienceBaseUri":"5881ded8e4b01192927d9f89","contributors":{"authors":[{"text":"Coe, Jeffrey A. 0000-0002-0842-9608 jcoe@usgs.gov","orcid":"https://orcid.org/0000-0002-0842-9608","contributorId":1333,"corporation":false,"usgs":true,"family":"Coe","given":"Jeffrey","email":"jcoe@usgs.gov","middleInitial":"A.","affiliations":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true},{"id":309,"text":"Geology and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":658522,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}} ,{"id":70180631,"text":"70180631 - 2016 - Geography and host species shape the evolutionary dynamics of U genogroup infectious hematopoietic necrosis virus","interactions":[],"lastModifiedDate":"2018-02-02T11:05:49","indexId":"70180631","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5051,"text":"Virus Evolution","onlineIssn":"2057-1577","active":true,"publicationSubtype":{"id":10}},"title":"Geography and host species shape the evolutionary dynamics of U genogroup infectious hematopoietic necrosis virus","docAbstract":"

Infectious hematopoietic necrosis virus (IHNV) is a negative-sense RNA virus that infects wild and cultured salmonids throughout the Pacific Coastal United States and Canada, from California to Alaska. Although infection of adult fish is usually asymptomatic, juvenile infections can result in high mortality events that impact salmon hatchery programs and commercial aquaculture. We used epidemiological case data and genetic sequence data from a 303 nt portion of the viral glycoprotein gene to study the evolutionary dynamics of U genogroup IHNV in the Pacific Northwestern United States from 1971 to 2013. We identified 114 unique genotypes among 1,219 U genogroup IHNV isolates representing 619 virus detection events. We found evidence for two previously unidentified, broad subgroups within the U genogroup, which we designated ‘UC’ and ‘UP’. Epidemiologic records indicated that UP viruses were detected more frequently in sockeye salmon (Oncorhynchus nerka) and in coastal waters of Washington and Oregon, whereas UC viruses were detected primarily in Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) in the Columbia River Basin, which is a large, complex watershed extending throughout much of interior Washington, Oregon, and Idaho. These findings were supported by phylogenetic analysis and by FST. Ancestral state reconstruction indicated that early UC viruses in the Columbia River Basin initially infected sockeye salmon but then emerged via host shifts into Chinook salmon and steelhead trout sometime during the 1980s. We postulate that the development of these subgroups within U genogroup was driven by selection pressure for viral adaptation to Chinook salmon and steelhead trout within the Columbia River Basin.

","language":"English","publisher":"Oxford University Press","doi":"10.1093/ve/vew034","usgsCitation":"Black, A., Breyta, R., Bedford, T., and Kurath, G., 2016, Geography and host species shape the evolutionary dynamics of U genogroup infectious hematopoietic necrosis virus: Virus Evolution, v. 2, no. 2, Article vew034; 13 p., https://doi.org/10.1093/ve/vew034.","productDescription":"Article vew034; 13 p.","ipdsId":"IP-074420","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":470290,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/ve/vew034","text":"Publisher Index Page"},{"id":334407,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Idaho, Oregon, 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\"}}]}","volume":"2","issue":"2","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-12-26","publicationStatus":"PW","scienceBaseUri":"5891b0a8e4b072a7ac1298ed","contributors":{"authors":[{"text":"Black, Allison","contributorId":147061,"corporation":false,"usgs":false,"family":"Black","given":"Allison","email":"","affiliations":[{"id":16782,"text":"Institute for Public Health Genetics, UW, Seattle, WA","active":true,"usgs":false}],"preferred":false,"id":661803,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Breyta, Rachel","contributorId":150355,"corporation":false,"usgs":false,"family":"Breyta","given":"Rachel","affiliations":[],"preferred":false,"id":661804,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bedford, Trevor","contributorId":178965,"corporation":false,"usgs":false,"family":"Bedford","given":"Trevor","email":"","affiliations":[],"preferred":false,"id":661805,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kurath, Gael 0000-0003-3294-560X gkurath@usgs.gov","orcid":"https://orcid.org/0000-0003-3294-560X","contributorId":2629,"corporation":false,"usgs":true,"family":"Kurath","given":"Gael","email":"gkurath@usgs.gov","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":661802,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70193153,"text":"70193153 - 2016 - Impacts of short-rotation early-growing season prescribed fire on a ground nesting bird in the central hardwoods region of North America","interactions":[],"lastModifiedDate":"2017-11-21T12:31:47","indexId":"70193153","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2980,"text":"PLoS ONE","active":true,"publicationSubtype":{"id":10}},"title":"Impacts of short-rotation early-growing season prescribed fire on a ground nesting bird in the central hardwoods region of North America","docAbstract":"

Landscape-scale short-rotation early-growing season prescribed fire, hereafter prescribed fire, in upland hardwood forests represents a recent shift in management strategies across eastern upland forests. Not only does this strategy depart from dormant season to growing season prescriptions, but the strategy also moves from stand-scale to landscape-scale implementation (>1,000 ha). This being so, agencies are making considerable commitments in terms of time and resources to this management strategy, but the effects on wildlife in upland forests, especially those dominated by hardwood canopy species, are relatively unknown. We initiated our study to assess whether this management strategy affects eastern wild turkey reproductive ecology on the Ozark-St. Francis National Forest. We marked 67 wild turkey hens with Global Positioning System (GPS) Platform Transmitting Terminals in 2012 and 2013 to document exposure to prescribed fire, and estimate daily nest survival, nest success, and nest-site selection. We estimated these reproductive parameters in forest units managed with prescribed fire (treated) and units absent of prescribed fire (untreated). Of 60 initial nest attempts monitored, none were destroyed or exposed to prescribed fire because a majority of fires occurred early than a majority of the nesting activity. We found nest success was greater in untreated units than treated units (36.4% versus 14.6%). We did not find any habitat characteristic differences between successful and unsuccessful nest-sites. We found that nest-site selection criteria differed between treated and untreated units. Visual concealment and woody ground cover were common selection criteria in both treated and untreated units. However, in treated units wild turkey selected nest-sites with fewer small shrubs (<5 cm ground diameter) and large trees (>20 cm DBH) but not in untreated units. In untreated units wild turkey selected nest-sites with more large shrubs (≥5cm ground diameter) but did not select for small shrubs or large trees. Our findings suggest that wild turkey have not benefited from the reintroduction of prescribed fire to the WRERA.

","language":"English","publisher":"PLOS","doi":"10.1371/journal.pone.0147317","usgsCitation":"Pittman, H.T., and Krementz, D.G., 2016, Impacts of short-rotation early-growing season prescribed fire on a ground nesting bird in the central hardwoods region of North America: PLoS ONE, v. 11, no. 1, p. 1-14, https://doi.org/10.1371/journal.pone.0147317.","productDescription":" e0147317; 14 p.","startPage":"1","endPage":"14","ipdsId":"IP-059168","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":470286,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1371/journal.pone.0147317","text":"Publisher Index Page"},{"id":349194,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arkansas","otherGeospatial":"White Rock Ecosystem Restoration Area","volume":"11","issue":"1","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2016-01-21","publicationStatus":"PW","scienceBaseUri":"5a60fc65e4b06e28e9c23e10","contributors":{"authors":[{"text":"Pittman, H. Tyler","contributorId":200530,"corporation":false,"usgs":false,"family":"Pittman","given":"H.","email":"","middleInitial":"Tyler","affiliations":[],"preferred":false,"id":723027,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Krementz, David G. 0000-0002-5661-4541 dkrementz@usgs.gov","orcid":"https://orcid.org/0000-0002-5661-4541","contributorId":2827,"corporation":false,"usgs":true,"family":"Krementz","given":"David","email":"dkrementz@usgs.gov","middleInitial":"G.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":718101,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}} ,{"id":70179747,"text":"70179747 - 2016 - Status of scientific knowledge, recovery progress, and future research directions for the Gulf Sturgeon, Acipenser oxyrinchus desotoi Vladykov, 1955","interactions":[],"lastModifiedDate":"2017-01-19T16:11:22","indexId":"70179747","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2166,"text":"Journal of Applied Ichthyology","active":true,"publicationSubtype":{"id":10}},"title":"Status of scientific knowledge, recovery progress, and future research directions for the Gulf Sturgeon, Acipenser oxyrinchus desotoi Vladykov, 1955","docAbstract":"

The Gulf Sturgeon, Acipenser oxyrinchus desotoi, is an anadromous species of Acipenseridae and native to North America. It currently inhabits and spawns in the upper reaches of seven natal rivers along the northern coast of the Gulf of Mexico from the Suwannee River, Florida, to the Pearl River, Louisiana, during spring to autumn. Next to the Alligator Gar (Atractosteus spatula), the Gulf Sturgeon is currently the largest fish species occurring in U.S. Gulf Coast rivers, attaining a length of 2.35 m and weights exceeding 135 kg, but historically attained a substantially larger size. Historically, the spawning populations existed in additional rivers from which the species has been wholly or nearly extirpated, such as the Mobile and Ochlockonee rivers, and possibly the Rio Grande River. Most Gulf Sturgeon populations were decimated by unrestricted commercial fishing between 1895–1910. Subsequently most populations remained unrecovered or extirpated due to continued harvest until the 1970s–1980s, and the construction of dams blocking access to ancestral upriver spawning grounds. Late 20th Century harvest bans and net bans enacted by the several Gulf Coast states have stabilized several populations and enabled the Suwannee River population to rebound substantially and naturally. Hatchery supplementation has not been necessary in this regard to date. Sturgeon are resilient and adaptable fishes with a geological history of 150 million years. Research undertaken since the 1970s has addressed many aspects of Gulf Sturgeon life history, reproduction, migration, population biology, habitat requirements, and other aspects of species biology. However, many knowledge gaps remain, prominently including the life history of early developmental stages in the first year of life. Natural population recovery is evident for the Suwannee River population, but seems promising as well for at least four other populations. The Pascagoula and Pearl River populations face a challenging future due a combination of natural and anthropogenic factors. These two populations, and perhaps the Escambia River population, are particularly vulnerable to periodic mass mortality due to major stochastic events including hurricanes, flooding, hypoxia, and toxic spills. The present manuscript provides a comprehensive synthesis of knowledge regarding the Gulf Sturgeon at the organismal and population levels, identifying knowledge gaps as priorities for future research. Topics not treated in the present synthesis include morphology, internal biology, physiology, and endocrinology. Topics only briefly treated include parasites and diseases, contaminants, and sturgeon aquaculture.

","language":"English","publisher":"Wiley","doi":"10.1111/jai.13245","usgsCitation":"Sulak, K.J., Parauka, F., Slack, W.T., Ruth, T., Randall, M.T., Luke, K., Mette, M.F., and Price, M., 2016, Status of scientific knowledge, recovery progress, and future research directions for the Gulf Sturgeon, Acipenser oxyrinchus desotoi Vladykov, 1955: Journal of Applied Ichthyology, v. 32, no. S1, p. 87-161, https://doi.org/10.1111/jai.13245.","productDescription":"74 p.","startPage":"87","endPage":"161","ipdsId":"IP-079396","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":333488,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"32","issue":"S1","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationDate":"2017-01-16","publicationStatus":"PW","scienceBaseUri":"5881ded9e4b01192927d9f8b","chorus":{"doi":"10.1111/jai.13245","url":"http://dx.doi.org/10.1111/jai.13245","publisher":"Wiley-Blackwell","authors":"Sulak K. J., Parauka F., Slack W. T., Ruth R. T., Randall M. T., Luke K., Mettee M. F., Price M. E.","journalName":"Journal of Applied Ichthyology","publicationDate":"12/2016","auditedOn":"1/19/2017"},"contributors":{"authors":[{"text":"Sulak, Kenneth J. 0000-0002-4795-9310 ksulak@usgs.gov","orcid":"https://orcid.org/0000-0002-4795-9310","contributorId":2217,"corporation":false,"usgs":true,"family":"Sulak","given":"Kenneth","email":"ksulak@usgs.gov","middleInitial":"J.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":658514,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Parauka, F","contributorId":178326,"corporation":false,"usgs":false,"family":"Parauka","given":"F","affiliations":[],"preferred":false,"id":658515,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Slack, W. Todd","contributorId":151319,"corporation":false,"usgs":false,"family":"Slack","given":"W.","email":"","middleInitial":"Todd","affiliations":[],"preferred":false,"id":658516,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Ruth, T","contributorId":178327,"corporation":false,"usgs":false,"family":"Ruth","given":"T","email":"","affiliations":[],"preferred":false,"id":658517,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Randall, Michael T. 0000-0001-8805-0886 mrandall@usgs.gov","orcid":"https://orcid.org/0000-0001-8805-0886","contributorId":3127,"corporation":false,"usgs":true,"family":"Randall","given":"Michael","email":"mrandall@usgs.gov","middleInitial":"T.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":658521,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Luke, K","contributorId":178328,"corporation":false,"usgs":false,"family":"Luke","given":"K","email":"","affiliations":[],"preferred":false,"id":658518,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Mette, M. F","contributorId":178329,"corporation":false,"usgs":false,"family":"Mette","given":"M.","email":"","middleInitial":"F","affiliations":[],"preferred":false,"id":658519,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Price, M. E 0000-0002-4276-0855","orcid":"https://orcid.org/0000-0002-4276-0855","contributorId":178330,"corporation":false,"usgs":false,"family":"Price","given":"M. E","affiliations":[],"preferred":false,"id":658520,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}} ,{"id":70189535,"text":"70189535 - 2016 - 2016 update on induced earthquakes in the United States","interactions":[],"lastModifiedDate":"2017-07-17T11:26:57","indexId":"70189535","displayToPublicDate":"2017-01-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"2016 update on induced earthquakes in the United States","docAbstract":"During the past decade people living in numerous locations across the central U.S. experienced many more small to moderate sized earthquakes than ever before. This earthquake activity began increasing about 2009 and peaked during 2015 and into early 2016. For example, prior to 2009 Oklahoma typically experienced 1 or 2 small earthquakes per year with magnitude greater than 3.0 but by 2015 this number rose to over 900 earthquakes per year of that size and over 30 earthquakes greater than 4.0. These earthquakes can cause damage. In 2011 a magnitude 5.6 earthquake struck near the town of Prague, Oklahoma on a preexisting fault and caused severe damage to several houses and school buildings. During the past 6 years more than 1500 reports of damaging shaking levels were reported in areas of induced seismicity. This rapid increase and the potential for damaging ground shaking from induced earthquakes caused alarm to about 8 million people living nearby and officials responsible for public safety. They wanted to understand why earthquakes were increasing and the potential threats to society and buildings located nearby.","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"2016 Britannica Book of the Year (A Review of 2015)","language":"English","publisher":"Encyclopedia Britannica","usgsCitation":"Petersen, M.D., 2016, 2016 update on induced earthquakes in the United States, chap. of 2016 Britannica Book of the Year (A Review of 2015).","ipdsId":"IP-077829","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":343938,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"596dcca3e4b0d1f9f0627561","contributors":{"authors":[{"text":"Petersen, Mark D. 0000-0001-8542-3990 mpetersen@usgs.gov","orcid":"https://orcid.org/0000-0001-8542-3990","contributorId":1163,"corporation":false,"usgs":true,"family":"Petersen","given":"Mark","email":"mpetersen@usgs.gov","middleInitial":"D.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true},{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":true,"id":705097,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}} ,{"id":70197823,"text":"70197823 - 2016 - Protocol and results from the first season of captive-rearing whooping cranes for a non-migratory release in Louisiana","interactions":[],"lastModifiedDate":"2019-06-27T16:43:36","indexId":"70197823","displayToPublicDate":"2016-12-31T16:30:27","publicationYear":"2016","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"Protocol and results from the first season of captive-rearing whooping cranes for a non-migratory release in Louisiana","docAbstract":"

No abstract available

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\"}}]}","volume":"13","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Olsen, Glenn H. 0000-0002-7188-6203 golsen@usgs.gov","orcid":"https://orcid.org/0000-0002-7188-6203","contributorId":40918,"corporation":false,"usgs":true,"family":"Olsen","given":"Glenn","email":"golsen@usgs.gov","middleInitial":"H.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":738670,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Chandler, Jane N. 0000-0002-6131-2396 jchandler@usgs.gov","orcid":"https://orcid.org/0000-0002-6131-2396","contributorId":3512,"corporation":false,"usgs":true,"family":"Chandler","given":"Jane","email":"jchandler@usgs.gov","middleInitial":"N.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":738671,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}} ,{"id":70237036,"text":"70237036 - 2016 - Evaluation of performance of Taiwan housing stock and schools during the Mw6.4 Kaohsiung/Meinong Earthquake of February 6, 2016","interactions":[],"lastModifiedDate":"2024-02-22T17:56:23.316688","indexId":"70237036","displayToPublicDate":"2016-12-31T11:50:34","publicationYear":"2016","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"Evaluation of performance of Taiwan housing stock and schools during the Mw6.4 Kaohsiung/Meinong Earthquake of February 6, 2016","docAbstract":"

The recent Kaohsiung Meinong Earthquake which occurred on February 6, 2016 affected several categories of building stock for which risk identification programs were previously developed by NCREE.

A typical building type in the city of Tainan is a mixed-use three-to-five-story structure. The ground floor of this typical structure is an open-front commercial or manufacturing space, which is laterally a soft story. The upper floors are residential and extend over a covered sidewalk, with column supports at the front of the building. NCREE has an established “street house” program which provides criteria for homeowners to evaluate and retrofit these structures. This program is discussed below, as well as damage and structural deficiencies related to this type of structure that were observed during a field reconnaissance trip following the Meinong Earthquake.

An active evaluation and retrofit program is in place for school buildings in Taiwan. This program identifies buildings with seismic deficiencies and determines whether or not a retrofit is warranted. The program and retrofit strategies are discussed, as well as the performance of schools with and without retrofit during the Meinong Earthquake.

","conferenceTitle":"16th U.S.-Japan-N.Z. Workshop on the Improvement of Structural Engineering and Resiliency","conferenceDate":"June 27-29, 2016","conferenceLocation":"Nara, Japan","language":"English","publisher":"Applied Technology Council","usgsCitation":"Gilsanz, R., Huang, C., Mandrick, J., Mugford, J., Hwang, S., Chiou, T., and Celebi, M., 2016, Evaluation of performance of Taiwan housing stock and schools during the Mw6.4 Kaohsiung/Meinong Earthquake of February 6, 2016, 16th U.S.-Japan-N.Z. Workshop on the Improvement of Structural Engineering and Resiliency, Nara, Japan, June 27-29, 2016, 9 p.","productDescription":"9 p.","ipdsId":"IP-076743","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":425882,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":407449,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.atcouncil.org/atc-15-15-w-presentations","linkFileType":{"id":5,"text":"html"}}],"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Gilsanz, Ramon","contributorId":297026,"corporation":false,"usgs":false,"family":"Gilsanz","given":"Ramon","email":"","affiliations":[{"id":64278,"text":"Gilsanz Murray Steficek (GMS), NewYork, NY","active":true,"usgs":false}],"preferred":false,"id":895248,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Huang, Cathy","contributorId":297027,"corporation":false,"usgs":false,"family":"Huang","given":"Cathy","email":"","affiliations":[{"id":64278,"text":"Gilsanz Murray Steficek (GMS), NewYork, NY","active":true,"usgs":false}],"preferred":false,"id":895249,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Mandrick, Jessica","contributorId":297028,"corporation":false,"usgs":false,"family":"Mandrick","given":"Jessica","email":"","affiliations":[{"id":64278,"text":"Gilsanz Murray Steficek (GMS), NewYork, NY","active":true,"usgs":false}],"preferred":false,"id":895250,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mugford, Joe","contributorId":297029,"corporation":false,"usgs":false,"family":"Mugford","given":"Joe","email":"","affiliations":[{"id":64278,"text":"Gilsanz Murray Steficek (GMS), NewYork, NY","active":true,"usgs":false}],"preferred":false,"id":895251,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hwang, Shyh-Jiann","contributorId":334302,"corporation":false,"usgs":false,"family":"Hwang","given":"Shyh-Jiann","email":"","affiliations":[],"preferred":false,"id":895252,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Chiou, Tsung-Chih","contributorId":297041,"corporation":false,"usgs":false,"family":"Chiou","given":"Tsung-Chih","email":"","affiliations":[{"id":64283,"text":"NCREE, Taipeu, Taiwan","active":true,"usgs":false}],"preferred":false,"id":895253,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Celebi, Mehmet 0000-0002-4769-7357 celebi@usgs.gov","orcid":"https://orcid.org/0000-0002-4769-7357","contributorId":200969,"corporation":false,"usgs":true,"family":"Celebi","given":"Mehmet","email":"celebi@usgs.gov","affiliations":[],"preferred":true,"id":895254,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70208287,"text":"70208287 - 2016 - Modeling martian thermal inertia in a distributed memory high performance computing environment","interactions":[],"lastModifiedDate":"2020-02-03T10:19:52","indexId":"70208287","displayToPublicDate":"2016-12-31T10:07:21","publicationYear":"2016","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"Modeling martian thermal inertia in a distributed memory high performance computing environment","docAbstract":"

Modeling martian surface properties fusing high resolution, spatially enabled, remotely sensed data and derived thermophysical modeling is an essential tool for surface property characterization studies. In this work, we describe the development of a thermal inertia modeling tool that integrates the KRC thermal model and a nine-dimensional parameter interpolation with inputs draw from remotely sensed data. Our model is classifiable as operating in both the Big Data and Big Process domains. We utilize the KRC thermal model to generate a dense lookup table. We show that the overall size of the lookup table necessary to derive thermal inertia can be reduced, through sampling, by approximately 82% while maintaining a high level of accuracy at those regions of the parameter space where thermal inertia is most frequently derived. This level of data reduction supports the distributed, in-memory application of our model and we illustrate the computational performance through a classic scaling experiment. This work extends previous modeling efforts by allowing for pixel scale thermal inertia modeling at the highest spatial scales allowed, and enabling surface properties investigations at spatial scales relevant to addressing high-priority science and engineering questions.

","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Proceedings 2016 IEEE international conference on big data ","largerWorkSubtype":{"id":12,"text":"Conference publication"},"conferenceTitle":"2016 IEEE International Conference on Big Data","conferenceDate":"Dec 5-8, 2015","conferenceLocation":"Washington DC","language":"English","publisher":"Institute of Electrical and Electronics Engineers","doi":"10.1109/BigData.2016.7840942","usgsCitation":"Laura, J., and Fergason, R.L., 2016, Modeling martian thermal inertia in a distributed memory high performance computing environment, in Proceedings 2016 IEEE international conference on big data , Washington DC, Dec 5-8, 2015, p. 2919-2928, https://doi.org/10.1109/BigData.2016.7840942.","productDescription":"10 p.","startPage":"2919","endPage":"2928","ipdsId":"IP-080208","costCenters":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"links":[{"id":371914,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"otherGeospatial":"Mars","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Laura, Jason 0000-0002-1377-8159","orcid":"https://orcid.org/0000-0002-1377-8159","contributorId":222124,"corporation":false,"usgs":true,"family":"Laura","given":"Jason","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":781265,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fergason, Robin L. 0000-0002-2044-1714","orcid":"https://orcid.org/0000-0002-2044-1714","contributorId":206167,"corporation":false,"usgs":true,"family":"Fergason","given":"Robin","email":"","middleInitial":"L.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":781266,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}} ,{"id":70192264,"text":"70192264 - 2016 - Thiamine and lipid utilization in fasting Chinook salmon","interactions":[],"lastModifiedDate":"2020-05-21T15:20:22.545983","indexId":"70192264","displayToPublicDate":"2016-12-31T09:58:46","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5527,"text":"North Pacific Anadromous Fish Commission Bulletin","active":true,"publicationSubtype":{"id":10}},"title":"Thiamine and lipid utilization in fasting Chinook salmon","docAbstract":"

A laboratory study was conducted to estimate utilization rates of thiamine (vitamin B1) and lipid in whole fish, muscle, and liver tissues of fasting Chinook salmon (Oncorhynchus tshawytscha). The experiment was conducted with Chinook salmon held at 5ºC over a period of 150 days to simulate fasting during migration or overwintering. Chinook salmon body length and wet weight did not change (p > 0.05) over the course of the study; however, significant declines were observed in muscle thiamine (p < 0.01) and lipid (p < 0.01). There was an inverse relationship between lipid and water content. Under the experimental conditions with no strenuous swimming, thiamine utilization rates reported are conservative estimates and were found to be 5.3–6.8 pmol·g-1·day-1 in muscle tissue and ~110 pmol·g-1·day-1 in liver tissue over the first 100 days. Fasting lipid depletion rates in whole fish were calculated to be 0.14–0.16%·d-1. Muscle lipid decline rate (0.13%·day-1) over the first 100 days was similar to whole fish lipid loss, however, muscle lipid utilization was slower (0.04%·day-1) over the last 50 days. During periods of fasting, Chinook salmon deplete bodily reserves of both thiamine and lipid which may have consequences for successful spawning migration and overwinter survival.

","language":"English","publisher":"North Pacific Fish Anadromous Fish Commission","doi":"10.23849/npafcb6/13.19","usgsCitation":"Honeyfield, D.C., Peters, A.K., and Jones, M., 2016, Thiamine and lipid utilization in fasting Chinook salmon: North Pacific Anadromous Fish Commission Bulletin, v. 6, p. 13-19, https://doi.org/10.23849/npafcb6/13.19.","productDescription":"7 p.","startPage":"13","endPage":"19","ipdsId":"IP-071017","costCenters":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"links":[{"id":470296,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.23849/npafcb6/13.19","text":"Publisher Index Page"},{"id":374995,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"6","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2016-12-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Honeyfield, Dale C. 0000-0003-3034-2047 honeyfie@usgs.gov","orcid":"https://orcid.org/0000-0003-3034-2047","contributorId":2774,"corporation":false,"usgs":true,"family":"Honeyfield","given":"Dale","email":"honeyfie@usgs.gov","middleInitial":"C.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":715057,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Peters, A. K.","contributorId":56860,"corporation":false,"usgs":true,"family":"Peters","given":"A.","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":789666,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Jones, Michael L.","contributorId":7219,"corporation":false,"usgs":false,"family":"Jones","given":"Michael L.","affiliations":[{"id":6590,"text":"Department of Fisheries and Wildlife, Michigan State University","active":true,"usgs":false}],"preferred":false,"id":789667,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}} ,{"id":70207589,"text":"70207589 - 2016 - Habitat and diet of equids","interactions":[],"lastModifiedDate":"2019-12-31T09:53:22","indexId":"70207589","displayToPublicDate":"2016-12-31T09:52:14","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"chapter":"4","title":"Habitat and diet of equids","docAbstract":"In this chapter, we present information from studies of equids and their \nhabitat use across various habitat types. 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