{"pageNumber":"1050","pageRowStart":"26225","pageSize":"25","recordCount":184717,"records":[{"id":70193660,"text":"70193660 - 2016 - Structured decision making as a framework for large-scale wildlife harvest management decisions","interactions":[],"lastModifiedDate":"2017-11-05T21:40:27","indexId":"70193660","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1475,"text":"Ecosphere","active":true,"publicationSubtype":{"id":10}},"title":"Structured decision making as a framework for large-scale wildlife harvest management decisions","docAbstract":"<p>Fish and wildlife harvest management at large spatial scales often involves making complex decisions with multiple objectives and difficult tradeoffs, population demographics that vary spatially, competing stakeholder values, and uncertainties that might affect management decisions. Structured decision making (SDM) provides a formal decision analytic framework for evaluating difficult decisions by breaking decisions into component parts and separating the values of stakeholders from the scientific evaluation of management actions and uncertainty. The result is a rigorous, transparent, and values-driven process. This decision-aiding process provides the decision maker with a more complete understanding of the problem and the effects of potential management actions on stakeholder values, as well as how key uncertainties can affect the decision. We use a case study to illustrate how SDM can be used as a decision-aiding tool for management decision making at large scales. We evaluated alternative white-tailed deer (<i>Odocoileus virginianus</i>) buck-harvest regulations in New York designed to reduce harvest of yearling bucks, taking into consideration the values of the state wildlife agency responsible for managing deer, as well as deer hunters. We incorporated tradeoffs about social, ecological, and economic management concerns throughout the state. Based on the outcomes of predictive models, expert elicitation, and hunter surveys, the SDM process identified management alternatives that optimized competing objectives. The SDM process provided biologists and managers insight about aspects of the buck-harvest decision that helped them adopt a management strategy most compatible with diverse hunter values and management concerns.</p>","language":"English","publisher":"Wiley","doi":"10.1002/ecs2.1613","usgsCitation":"Robinson, K., Fuller, A.K., Hurst, J.E., Swift, B.L., Kirsch, A., Farquhar, J.F., Decker, D.J., and Siemer, W.F., 2016, Structured decision making as a framework for large-scale wildlife harvest management decisions: Ecosphere, v. 7, no. 12, Article e01613; 14 p., https://doi.org/10.1002/ecs2.1613.","productDescription":"Article e01613; 14 p.","ipdsId":"IP-078686","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":470346,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/ecs2.1613","text":"Publisher Index Page"},{"id":348207,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"7","issue":"12","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2016-12-20","publicationStatus":"PW","scienceBaseUri":"5a003151e4b0531197b5a750","contributors":{"authors":[{"text":"Robinson, Kelly F.","contributorId":140157,"corporation":false,"usgs":false,"family":"Robinson","given":"Kelly F.","affiliations":[{"id":473,"text":"New York Cooperative Fish and Wildlife Research Unit","active":false,"usgs":true},{"id":6590,"text":"Department of Fisheries and Wildlife, Michigan State University","active":true,"usgs":false},{"id":13267,"text":"Warnell School of Forestry and Natural Resources, University of Georgia","active":true,"usgs":false}],"preferred":false,"id":719792,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fuller, Angela K. 0000-0002-9247-7468 afuller@usgs.gov","orcid":"https://orcid.org/0000-0002-9247-7468","contributorId":3984,"corporation":false,"usgs":true,"family":"Fuller","given":"Angela","email":"afuller@usgs.gov","middleInitial":"K.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":719791,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hurst, Jeremy E.","contributorId":177504,"corporation":false,"usgs":false,"family":"Hurst","given":"Jeremy","email":"","middleInitial":"E.","affiliations":[{"id":13678,"text":"New York State Department of Environmental Conservation","active":true,"usgs":false}],"preferred":false,"id":719793,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Swift, Bryan L.","contributorId":11433,"corporation":false,"usgs":false,"family":"Swift","given":"Bryan","email":"","middleInitial":"L.","affiliations":[{"id":13678,"text":"New York State Department of Environmental Conservation","active":true,"usgs":false}],"preferred":false,"id":719794,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kirsch, Arthur","contributorId":199698,"corporation":false,"usgs":false,"family":"Kirsch","given":"Arthur","email":"","affiliations":[{"id":13678,"text":"New York State Department of Environmental Conservation","active":true,"usgs":false}],"preferred":false,"id":719795,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Farquhar, James F.","contributorId":150969,"corporation":false,"usgs":false,"family":"Farquhar","given":"James","email":"","middleInitial":"F.","affiliations":[{"id":13678,"text":"New York State Department of Environmental Conservation","active":true,"usgs":false}],"preferred":false,"id":719796,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Decker, Daniel J.","contributorId":166906,"corporation":false,"usgs":false,"family":"Decker","given":"Daniel","email":"","middleInitial":"J.","affiliations":[{"id":12722,"text":"Cornell University","active":true,"usgs":false}],"preferred":false,"id":719797,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Siemer, William F.","contributorId":192551,"corporation":false,"usgs":false,"family":"Siemer","given":"William","email":"","middleInitial":"F.","affiliations":[{"id":12722,"text":"Cornell University","active":true,"usgs":false}],"preferred":false,"id":719798,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70193635,"text":"70193635 - 2016 - Accurate recapture identification for genetic mark–recapture studies with error-tolerant likelihood-based match calling and sample clustering","interactions":[],"lastModifiedDate":"2017-11-13T14:58:13","indexId":"70193635","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3908,"text":"Royal Society Open Science","active":true,"publicationSubtype":{"id":10}},"title":"Accurate recapture identification for genetic mark–recapture studies with error-tolerant likelihood-based match calling and sample clustering","docAbstract":"<p><span>Error-tolerant likelihood-based match calling presents a promising technique to accurately identify recapture events in genetic mark–recapture studies by combining probabilities of latent genotypes and probabilities of observed genotypes, which may contain genotyping errors. Combined with clustering algorithms to group samples into sets of recaptures based upon pairwise match calls, these tools can be used to reconstruct accurate capture histories for mark–recapture modelling. Here, we assess the performance of a recently introduced error-tolerant likelihood-based match-calling model and sample clustering algorithm for genetic mark–recapture studies. We assessed both biallelic (i.e. single nucleotide polymorphisms; SNP) and multiallelic (i.e. microsatellite; MSAT) markers using a combination of simulation analyses and case study data on Pacific walrus (</span><i>Odobenus rosmarus divergens</i><span>) and fishers (</span><i>Pekania pennanti</i><span>). A novel two-stage clustering approach is demonstrated for genetic mark–recapture applications. First, repeat captures within a sampling occasion are identified. Subsequently, recaptures across sampling occasions are identified. The likelihood-based matching protocol performed well in simulation trials, demonstrating utility for use in a wide range of genetic mark–recapture studies. Moderately sized SNP (64+) and MSAT (10–15) panels produced accurate match calls for recaptures and accurate non-match calls for samples from closely related individuals in the face of low to moderate genotyping error. Furthermore, matching performance remained stable or increased as the number of genetic markers increased, genotyping error notwithstanding.</span></p>","language":"English","publisher":"The Royal Society Publishing","doi":"10.1098/rsos.160457","usgsCitation":"Sethi, S., Linden, D., Wenburg, J., Lewis, C., Lemons, P.R., Fuller, A.K., and Hare, M.P., 2016, Accurate recapture identification for genetic mark–recapture studies with error-tolerant likelihood-based match calling and sample clustering: Royal Society Open Science, v. 3, p. 1-14, https://doi.org/10.1098/rsos.160457.","productDescription":"Article 160457; 14 p.","startPage":"1","endPage":"14","ipdsId":"IP-076769","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":470349,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1098/rsos.160457","text":"Publisher Index Page"},{"id":348725,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"3","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5a60fc7de4b06e28e9c23f09","contributors":{"authors":[{"text":"Sethi, Suresh 0000-0002-0053-1827 ssethi@usgs.gov","orcid":"https://orcid.org/0000-0002-0053-1827","contributorId":191424,"corporation":false,"usgs":true,"family":"Sethi","given":"Suresh","email":"ssethi@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":719697,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Linden, Daniel","contributorId":199671,"corporation":false,"usgs":false,"family":"Linden","given":"Daniel","affiliations":[],"preferred":false,"id":719698,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wenburg, John","contributorId":199672,"corporation":false,"usgs":false,"family":"Wenburg","given":"John","affiliations":[],"preferred":false,"id":719699,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lewis, Cara","contributorId":199673,"corporation":false,"usgs":false,"family":"Lewis","given":"Cara","affiliations":[],"preferred":false,"id":719700,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Lemons, Patrick R.","contributorId":11014,"corporation":false,"usgs":true,"family":"Lemons","given":"Patrick","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":719701,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Fuller, Angela K. 0000-0002-9247-7468 afuller@usgs.gov","orcid":"https://orcid.org/0000-0002-9247-7468","contributorId":3984,"corporation":false,"usgs":true,"family":"Fuller","given":"Angela","email":"afuller@usgs.gov","middleInitial":"K.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":719703,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hare, Matthew P.","contributorId":171454,"corporation":false,"usgs":false,"family":"Hare","given":"Matthew","email":"","middleInitial":"P.","affiliations":[{"id":12722,"text":"Cornell University","active":true,"usgs":false}],"preferred":false,"id":719702,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70193685,"text":"70193685 - 2016 - Semiautomatic mapping of permafrost in the Yukon Flats, Alaska","interactions":[],"lastModifiedDate":"2017-11-02T16:37:20","indexId":"70193685","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1807,"text":"Geophysical Research Letters","active":true,"publicationSubtype":{"id":10}},"title":"Semiautomatic mapping of permafrost in the Yukon Flats, Alaska","docAbstract":"<p>Thawing of permafrost due to global warming can have major impacts on hydrogeological processes, climate feedback, arctic ecology, and local environments. To understand these effects and processes, it is crucial to know the distribution of permafrost. In this study we exploit the fact that airborne electromagnetic (AEM) data are sensitive to the distribution of permafrost and demonstrate how the distribution of permafrost in the Yukon Flats, Alaska, is mapped in an efficient (semiautomatic) way, using a combination of supervised and unsupervised (machine) learning algorithms, i.e., Smart Interpretation and K-means clustering. Clustering is used to sort unfrozen and frozen regions, and Smart Interpretation is used to predict the depth of permafrost based on expert interpretations. This workflow allows, for the first time, a quantitative and objective approach to efficiently map permafrost based on large amounts of AEM data.</p>","language":"English","publisher":"AGU","doi":"10.1002/2016GL071334","usgsCitation":"Gulbrandsen, M.L., Minsley, B.J., Ball, L.B., and Hansen, T.M., 2016, Semiautomatic mapping of permafrost in the Yukon Flats, Alaska: Geophysical Research Letters, v. 43, no. 23, p. 12131-12137, https://doi.org/10.1002/2016GL071334.","productDescription":"7 p.","startPage":"12131","endPage":"12137","ipdsId":"IP-080706","costCenters":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"links":[{"id":470396,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.1002/2016gl071334","text":"External Repository"},{"id":348149,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","otherGeospatial":"Yukon Flats","volume":"43","issue":"23","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2016-12-09","publicationStatus":"PW","scienceBaseUri":"59fc2ea6e4b0531197b27f87","contributors":{"authors":[{"text":"Gulbrandsen, Mats Lundh","contributorId":199734,"corporation":false,"usgs":false,"family":"Gulbrandsen","given":"Mats","email":"","middleInitial":"Lundh","affiliations":[{"id":27198,"text":"Niels Bohr Institute, University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":719885,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Minsley, Burke J. 0000-0003-1689-1306 bminsley@usgs.gov","orcid":"https://orcid.org/0000-0003-1689-1306","contributorId":697,"corporation":false,"usgs":true,"family":"Minsley","given":"Burke","email":"bminsley@usgs.gov","middleInitial":"J.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":719884,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Ball, Lyndsay B. 0000-0002-6356-4693 lbball@usgs.gov","orcid":"https://orcid.org/0000-0002-6356-4693","contributorId":1138,"corporation":false,"usgs":true,"family":"Ball","given":"Lyndsay","email":"lbball@usgs.gov","middleInitial":"B.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":719886,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hansen, Thomas Mejer","contributorId":199735,"corporation":false,"usgs":false,"family":"Hansen","given":"Thomas","email":"","middleInitial":"Mejer","affiliations":[{"id":27198,"text":"Niels Bohr Institute, University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":719887,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70193684,"text":"70193684 - 2016 - Timing of spring wild turkey hunting in relation to nest incubation","interactions":[],"lastModifiedDate":"2017-11-08T16:03:20","indexId":"70193684","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"title":"Timing of spring wild turkey hunting in relation to nest incubation","docAbstract":"<p>State wildlife agencies are often requested to open spring wild turkey (<i>Meleagris gallopavo</i>; hereafter, turkey) hunting seasons earlier to increase hunter satisfaction by hunters hearing more gobbling male turkeys. Timing of spring turkey hunting season in several states, including Pennsylvania, has been established to open, on average, near median date of incubation initiation of turkey nests. This is believed to reduce illegal and undesired hen harvest and possibly nest abandonment, while maintaining hunter satisfaction of hearing male turkeys when most hens are incubating eggs. However, Pennsylvania’s spring season structure was established in 1968. Given earlier spring phenology, and potentially more variation in spring weather due to climate change, there is concern that timing of nest incubation for turkeys in Pennsylvania could be changing. Therefore, our objective was to determine if nest incubation and opening of spring turkey hunting in Pennsylvania have continued to coincide. We attached satellite transmitters to 254 female turkeys during 2010–2014 and estimated median incubation initiation date to be 2 May, which was 2 days earlier than median date during a statewide study during 1953–1963 and 9 days earlier than during a smaller scale study in south–central Pennsylvania during 2000–2001. However, incubation initiation varied greatly among years and individual hens during all 3 studies. During 4 of 5 years of our study, Pennsylvania’s spring season opened 3 to 8 days prior to median date of incubation initiation. Over the 5 years, estimated initiation of incubation for first nesting attempts, measured from earliest date of incubation initiation to latest, was &gt;2 months and maximum proportion of hens beginning incubation at any one time differed by several days to &gt;1 week. Consequently, in years of late incubation, a constant season opening date set near the long-term median date of incubation initiation exposes few additional hens to risk and hunter satisfaction is likely maintained at greater levels than would be seen with a more conservative approach of opening the season later. Long-term and large scale studies using GPS transmitters that provide precise determination of incubation initiation will be useful to study environmental influences on initiation of incubation.</p>","largerWorkType":{"id":24,"text":"Conference Paper"},"largerWorkTitle":"Proceedings of the National Wild Turkey Symposium","conferenceTitle":"11th National Wild Turkey Symposium","conferenceDate":"January 5-7, 2016","conferenceLocation":"Tucson, Arizona","language":"English","usgsCitation":"Casalena, M.J., Everett, R., Vreeland, W.C., Gregg, I.D., and Diefenbach, D.R., 2016, Timing of spring wild turkey hunting in relation to nest incubation, <i>in</i> Proceedings of the National Wild Turkey Symposium, v. 11, Tucson, Arizona, January 5-7, 2016, p. 237-247.","productDescription":"11 p.","startPage":"237","endPage":"247","ipdsId":"IP-064331","costCenters":[{"id":199,"text":"Coop Res Unit 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C.","contributorId":171658,"corporation":false,"usgs":false,"family":"Vreeland","given":"Wendy","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":721384,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Gregg, Ian D.","contributorId":200195,"corporation":false,"usgs":false,"family":"Gregg","given":"Ian","email":"","middleInitial":"D.","affiliations":[{"id":26925,"text":"Pennsylvania Game Commission, Harrisburg, PA","active":true,"usgs":false}],"preferred":false,"id":721386,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Diefenbach, Duane R. 0000-0001-5111-1147 drd11@usgs.gov","orcid":"https://orcid.org/0000-0001-5111-1147","contributorId":5235,"corporation":false,"usgs":true,"family":"Diefenbach","given":"Duane","email":"drd11@usgs.gov","middleInitial":"R.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":719883,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70179093,"text":"70179093 - 2016 - Evolution of the Lower Tertiary Elko Lake Basin, a potential hydrocarbon source rock in Northeast Nevada","interactions":[],"lastModifiedDate":"2018-01-08T13:16:23","indexId":"70179093","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"Evolution of the Lower Tertiary Elko Lake Basin, a potential hydrocarbon source rock in Northeast Nevada","docAbstract":"<p>No abstract available.</p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Hydrocarbon Source Rocks in Unconventional Plays, Rocky Mountain Region","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"Rocky Mountain Association of Geologists","usgsCitation":"Johnson, R.C., and Birdwell, J.E., 2016, Evolution of the Lower Tertiary Elko Lake Basin, a potential hydrocarbon source rock in Northeast Nevada, chap. <i>of</i> Hydrocarbon Source Rocks in Unconventional Plays, Rocky Mountain Region, p. 261-294.","productDescription":"34 p.","startPage":"261","endPage":"294","ipdsId":"IP-063444","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":332214,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":332213,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.rmag.org/publications"}],"publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58550b82e4b02bdf681568b7","contributors":{"editors":[{"text":"Dolan, Michael P.","contributorId":12880,"corporation":false,"usgs":false,"family":"Dolan","given":"Michael","email":"","middleInitial":"P.","affiliations":[{"id":7104,"text":"Dolan Integration Group, Boulder, CO","active":true,"usgs":false}],"preferred":false,"id":656056,"contributorType":{"id":2,"text":"Editors"},"rank":1},{"text":"Higley, Debra K. 0000-0001-8024-9954 higley@usgs.gov","orcid":"https://orcid.org/0000-0001-8024-9954","contributorId":152663,"corporation":false,"usgs":true,"family":"Higley","given":"Debra","email":"higley@usgs.gov","middleInitial":"K.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":656057,"contributorType":{"id":2,"text":"Editors"},"rank":2},{"text":"Lillis, Paul G. 0000-0002-7508-1699 plillis@usgs.gov","orcid":"https://orcid.org/0000-0002-7508-1699","contributorId":1817,"corporation":false,"usgs":true,"family":"Lillis","given":"Paul","email":"plillis@usgs.gov","middleInitial":"G.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":656058,"contributorType":{"id":2,"text":"Editors"},"rank":3}],"authors":[{"text":"Johnson, Ronald C. 0000-0002-6197-5165 rcjohnson@usgs.gov","orcid":"https://orcid.org/0000-0002-6197-5165","contributorId":1550,"corporation":false,"usgs":true,"family":"Johnson","given":"Ronald","email":"rcjohnson@usgs.gov","middleInitial":"C.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":656027,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Birdwell, Justin E. 0000-0001-8263-1452 jbirdwell@usgs.gov","orcid":"https://orcid.org/0000-0001-8263-1452","contributorId":3302,"corporation":false,"usgs":true,"family":"Birdwell","given":"Justin","email":"jbirdwell@usgs.gov","middleInitial":"E.","affiliations":[{"id":255,"text":"Energy Resources Program","active":true,"usgs":true},{"id":569,"text":"Southwest Climate Science Center","active":true,"usgs":true},{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":656028,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70178070,"text":"fs20163096 - 2016 - Selected streambed sediment compounds and water toxicity results for Westside Creeks, San Antonio, Texas, 2014","interactions":[],"lastModifiedDate":"2016-12-01T13:36:42","indexId":"fs20163096","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-3096","title":"Selected streambed sediment compounds and water toxicity results for Westside Creeks, San Antonio, Texas, 2014","docAbstract":"<h1>Introduction</h1><p>The Alazán, Apache, Martínez, and San Pedro Creeks in San Antonio, Texas, are part of a network of urban tributaries to the San Antonio River, known locally as the Westside Creeks. The Westside Creeks flow through some of the oldest neighborhoods in San Antonio. The disruption of streambed sediment is anticipated during a planned restoration to improve and restore the environmental condition of 14 miles of channelized sections of the Westside Creeks in San Antonio. These construction activities can create the potential to reintroduce chemicals found in the sediments into the ecosystem where, depending on hydrologic and environmental conditions, they could become bioavailable and toxic to aquatic life. Elevated concentrations of sediment-associated contaminants often are measured in urban areas such as San Antonio, Tex. Contaminants found in sediment can affect the health of aquatic organisms that ingest sediment. The gradual accumulation of trace elements and organic compounds in aquatic organisms can cause various physiological issues and can ultimately result in death of the aquatic organisms; in addition, subsequent ingestion of aquatic organisms can transfer the accumulated contaminants upward through the food chain (a process called biomagnification).</p><p>The U.S. Geological Survey, in cooperation with the San Antonio River Authority, collected sediment samples and water samples for toxicity testing from sites on the Westside Creeks as part of an initial characterization of selected contaminants in the study area. Samples were collected in January 2014 during base-flow conditions and again in May 2104 after a period of&nbsp;stormwater runoff (poststorm conditions). Sediment samples were analyzed for selected constituents, including trace elements and organic contaminants such as pesticides, brominated flame retardants, polychlorinated biphenyls (PCBs), and polycyclic aromatic hydrocarbons (PAHs). In addition, as an indicator of ecological health (and possibly bioavailability of contaminants in disturbed streambed sediments), the toxicity of water samples to the indicator species <i>Pimephales promelas</i> (fathead minnow) was evaluated by using standard 7-day water-toxicity testing.</p>","language":"English, Spanish","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20163096","collaboration":"Prepared in cooperation with the San Antonio River Authority","usgsCitation":"Crow, C.L., Wilson, J.T., and Kunz, J.L., 2016, Selected streambed sediment compounds and water toxicity results for Westside Creeks, San Antonio, Texas, 2014: U.S. Geological Survey Fact Sheet 2016–3096, 4 p., https://doi.org/10.3133/fs20163096.","productDescription":"Document: 4 p.; Companion File","startPage":"1","endPage":"4","numberOfPages":"4","onlineOnly":"N","additionalOnlineFiles":"Y","ipdsId":"IP-079315","costCenters":[{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true}],"links":[{"id":331371,"rank":3,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2016/3096/fs20163096_SpanishVersion.pdf","text":"Spanish Fact Sheet","size":"613 kB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2016–3096 Spanish Version"},{"id":331374,"rank":4,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/sir/2016/5136/sir20165136.pdf","text":"SIR 2016–5136","size":"8.64 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2016–5136"},{"id":331370,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2016/3096/fs20163096.pdf","text":"English Fact Sheet","size":"667 kB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2016–3096 English Version"},{"id":331369,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2016/3096/coverthb.jpg"}],"country":"United States","state":"Texas","city":"San Antonio","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -98.604167,\n              29.475\n            ],\n            [\n              -98.604167,\n              29.3625\n            ],\n            [\n              -98.454167,\n              29.3625\n            ],\n            [\n              -98.454167,\n              29.475\n            ],\n            [\n              -98.604167,\n              29.475\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, Texas Water Science Center<br>U.S. Geological Survey<br>1505 Ferguson Lane &nbsp;<br>Austin, Texas 78754–4501</p><p><a href=\"http://tx.usgs.gov/\" data-mce-href=\"http://tx.usgs.gov/\">http://tx.usgs.gov/</a></p>","tableOfContents":"<ul><li>Introduction<br></li><li>Sediment Quality Results<br></li><li>Water Toxicity Results<br></li><li>References<br></li></ul>","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"publishedDate":"2016-12-01","noUsgsAuthors":false,"publicationDate":"2016-12-01","publicationStatus":"PW","scienceBaseUri":"584144dde4b04fc80e507388","contributors":{"authors":[{"text":"Crow, Cassi L. 0000-0002-1279-2485 ccrow@usgs.gov","orcid":"https://orcid.org/0000-0002-1279-2485","contributorId":1666,"corporation":false,"usgs":true,"family":"Crow","given":"Cassi","email":"ccrow@usgs.gov","middleInitial":"L.","affiliations":[{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true}],"preferred":true,"id":652700,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wilson, Jennifer T. 0000-0003-4481-6354 jenwilso@usgs.gov","orcid":"https://orcid.org/0000-0003-4481-6354","contributorId":1782,"corporation":false,"usgs":true,"family":"Wilson","given":"Jennifer","email":"jenwilso@usgs.gov","middleInitial":"T.","affiliations":[{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true}],"preferred":true,"id":654593,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kunz, James L. 0000-0002-1027-158X jkunz@usgs.gov","orcid":"https://orcid.org/0000-0002-1027-158X","contributorId":3309,"corporation":false,"usgs":true,"family":"Kunz","given":"James","email":"jkunz@usgs.gov","middleInitial":"L.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":654594,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70179733,"text":"70179733 - 2016 - Genetic variation and  structure in remnant population of critically endangered Melicope zahlbruckneri","interactions":[],"lastModifiedDate":"2018-01-04T12:36:31","indexId":"70179733","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5265,"text":"Journal of Biodiversity & Endangered Species","active":true,"publicationSubtype":{"id":10}},"title":"Genetic variation and  structure in remnant population of critically endangered Melicope zahlbruckneri","docAbstract":"<p><span>The distribution and amount of genetic variation within and between populations of plant species are important for their adaptability to future habitat changes and also critical for their restoration and overall management. This study was initiated to assess the genetic status of the remnant population of Melicope zahlbruckneri–a critically endangered species in Hawaii, and determine the extent of genetic variation and diversity in order to propose valuable conservation approaches. Estimated genetic structure of individuals based on molecular marker allele frequencies identified genetic groups with low overall differentiation but identified the most genetically diverse individuals within the population. Analysis of Amplified Fragment Length Polymorphic (AFLP) marker loci in the population based on Bayesian model and multivariate statistics classified the population into four subgroups. We inferred a mixed species population structure based on Bayesian clustering and frequency of unique alleles. The percentage of Polymorphic Fragment (PPF) ranged from 18.8 to 64.6% for all marker loci with an average of 54.9% within the population. Inclusion of all surviving M. zahlbruckneri trees in future restorative planting at new sites are suggested, and approaches for longer term maintenance of genetic variability are discussed. To our knowledge, this study represents the first report of molecular genetic analysis of the remaining population of M. zahlbruckneri and also illustrates the importance of genetic variability for conservation of a small endangered population.</span></p>","language":"English","publisher":"OMICS International","doi":"10.4172/2332-2543.1000175","usgsCitation":"Raji, J., and Atkinson, C.T., 2016, Genetic variation and  structure in remnant population of critically endangered Melicope zahlbruckneri: Journal of Biodiversity & Endangered Species, v. 4, no. 3, p. 1-8, https://doi.org/10.4172/2332-2543.1000175.","productDescription":"Article 1000175; 8 p.","startPage":"1","endPage":"8","ipdsId":"IP-080087","costCenters":[{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true}],"links":[{"id":470358,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.4172/2332-2543.1000175","text":"Publisher Index Page"},{"id":333237,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"4","issue":"3","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"587f3c13e4b0d96de2564543","contributors":{"authors":[{"text":"Raji, J. A.","contributorId":178331,"corporation":false,"usgs":false,"family":"Raji","given":"J. A.","affiliations":[],"preferred":false,"id":658464,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Atkinson, Carter T. 0000-0002-4232-5335 catkinson@usgs.gov","orcid":"https://orcid.org/0000-0002-4232-5335","contributorId":1124,"corporation":false,"usgs":true,"family":"Atkinson","given":"Carter","email":"catkinson@usgs.gov","middleInitial":"T.","affiliations":[{"id":5049,"text":"Pacific Islands Ecosys Research Center","active":true,"usgs":true},{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true},{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":658463,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70184451,"text":"70184451 - 2016 - Environmental implications of the use of sulfidic back-bay sediments for dune reconstruction — Lessons learned post Hurricane Sandy","interactions":[],"lastModifiedDate":"2018-08-07T12:19:42","indexId":"70184451","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2676,"text":"Marine Pollution Bulletin","active":true,"publicationSubtype":{"id":10}},"title":"Environmental implications of the use of sulfidic back-bay sediments for dune reconstruction — Lessons learned post Hurricane Sandy","docAbstract":"<p><span>Some barrier-island dunes damaged or destroyed by Hurricane Sandy's storm surges in October 2012 have been reconstructed using sediments dredged from back bays. These sand-, clay-, and iron sulfide-rich sediments were used to make berm-like cores for the reconstructed dunes, which were then covered by beach sand. In November 2013, we sampled and analyzed partially weathered materials collected from the cores of reconstructed dunes. There are generally low levels of metal toxicants in the reconstructed dune materials. However oxidation of reactive iron sulfides by percolating rainwater produces acid-sulfate pore waters, which evaporate during dry periods to produce efflorescent gypsum and sodium jarosite salts. The results suggest use of sulfidic sediments in dune reconstruction has both drawbacks (e.g., potential to generate acid runoff from dune cores following rainfall, enhanced corrosion of steel bulwarks) and possible benefits (e.g., efflorescent salts may enhance structural integrity).</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.marpolbul.2016.04.051","usgsCitation":"Plumlee, G.S., Benzel, W., Hoefen, T.M., Hageman, P.L., Morman, S.A., Reilly, T.J., Adams, M., Berry, C.J., Fischer, J., and Fisher, I., 2016, Environmental implications of the use of sulfidic back-bay sediments for dune reconstruction — Lessons learned post Hurricane Sandy: Marine Pollution Bulletin, v. 107, no. 2, p. 459-471, https://doi.org/10.1016/j.marpolbul.2016.04.051.","productDescription":"13 p.","startPage":"459","endPage":"471","ipdsId":"IP-072137","costCenters":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true},{"id":589,"text":"Toxic Substances Hydrology Program","active":true,"usgs":true}],"links":[{"id":337166,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"New Jersey","volume":"107","issue":"2","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58c277d8e4b014cc3a3e76b1","contributors":{"authors":[{"text":"Plumlee, Geoffrey S. 0000-0002-9607-5626 gplumlee@usgs.gov","orcid":"https://orcid.org/0000-0002-9607-5626","contributorId":960,"corporation":false,"usgs":true,"family":"Plumlee","given":"Geoffrey","email":"gplumlee@usgs.gov","middleInitial":"S.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":681572,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Benzel, William 0000-0002-4085-1876 wbenzel@usgs.gov","orcid":"https://orcid.org/0000-0002-4085-1876","contributorId":3594,"corporation":false,"usgs":true,"family":"Benzel","given":"William","email":"wbenzel@usgs.gov","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true},{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":681573,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hoefen, Todd M. 0000-0002-3083-5987 thoefen@usgs.gov","orcid":"https://orcid.org/0000-0002-3083-5987","contributorId":403,"corporation":false,"usgs":true,"family":"Hoefen","given":"Todd","email":"thoefen@usgs.gov","middleInitial":"M.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true},{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":681574,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hageman, Philip L. 0000-0002-3440-2150 phageman@usgs.gov","orcid":"https://orcid.org/0000-0002-3440-2150","contributorId":811,"corporation":false,"usgs":true,"family":"Hageman","given":"Philip","email":"phageman@usgs.gov","middleInitial":"L.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":681575,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Morman, Suzette A. 0000-0002-2532-1033 smorman@usgs.gov","orcid":"https://orcid.org/0000-0002-2532-1033","contributorId":996,"corporation":false,"usgs":true,"family":"Morman","given":"Suzette","email":"smorman@usgs.gov","middleInitial":"A.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true},{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":681576,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Reilly, Timothy J. 0000-0002-2939-3050 tjreilly@usgs.gov","orcid":"https://orcid.org/0000-0002-2939-3050","contributorId":1858,"corporation":false,"usgs":true,"family":"Reilly","given":"Timothy","email":"tjreilly@usgs.gov","middleInitial":"J.","affiliations":[{"id":34983,"text":"Contaminant Biology Program","active":true,"usgs":true},{"id":470,"text":"New Jersey Water Science Center","active":true,"usgs":true}],"preferred":true,"id":681577,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Adams, Monique madams@usgs.gov","contributorId":1231,"corporation":false,"usgs":true,"family":"Adams","given":"Monique","email":"madams@usgs.gov","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":681578,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Berry, Cyrus J. cjberry@usgs.gov","contributorId":946,"corporation":false,"usgs":true,"family":"Berry","given":"Cyrus","email":"cjberry@usgs.gov","middleInitial":"J.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":681579,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Fischer, Jeffrey 0000-0003-2996-9272 fischer@usgs.gov","orcid":"https://orcid.org/0000-0003-2996-9272","contributorId":187753,"corporation":false,"usgs":true,"family":"Fischer","given":"Jeffrey","email":"fischer@usgs.gov","affiliations":[],"preferred":true,"id":681580,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Fisher, Irene ifisher@usgs.gov","contributorId":172759,"corporation":false,"usgs":true,"family":"Fisher","given":"Irene","email":"ifisher@usgs.gov","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":681581,"contributorType":{"id":1,"text":"Authors"},"rank":10}]}}
,{"id":70179089,"text":"70179089 - 2016 - The Chuar Petroleum System, Arizona and Utah","interactions":[],"lastModifiedDate":"2017-01-12T14:00:46","indexId":"70179089","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"The Chuar Petroleum System, Arizona and Utah","docAbstract":"The Neoproterozoic Chuar Group consists of marine mudstone, sandstone and dolomitic strata divided into the Galeros and Kwagunt Formations, and is exposed only in the eastern Grand Canyon, Arizona. Research by the U.S. Geological Survey (USGS) in the late 1980s identified strata within the group to be possible petroleum source rocks, and in particular the Walcott Member of the Kwagunt Formation. Industry interest in a Chuar oil play led to several exploratory wells drilled in the 1990s in southern Utah and northern Arizona to test the overlying Cambrian Tapeats Sandstone reservoir, and confirm the existence of the Chuar in subcrop. USGS geochemical analyses of Tapeats oil shows in two wells have been tentatively correlated to Chuar bitumen extracts. Distribution of the Chuar in the subsurface is poorly constrained with only five well penetrations, but recently published gravity/aeromagnetic interpretations provide further insight into the Chuar subcrop distribution. The Chuar petroleum system was reexamined as part of the USGS Paradox Basin resource assessment in 2011. A map was constructed to delineate the Chuar petroleum system that encompasses the projected Chuar source rock distribution and all oil shows in the Tapeats Sandstone, assuming that the Chuar is the most likely source for such oil shows. Two hypothetical plays were recognized but not assessed: (1) a conventional play with a Chuar source and Tapeats reservoir, and (2) an unconventional play with a Chuar source and reservoir. The conventional play has been discouraging because most surface structures have been tested by drilling with minimal petroleum shows, and there is some evidence that petroleum may have been flushed by CO2 from Tertiary volcanism. The unconventional play is untested and remains promising even though the subcrop distribution of source facies within the Chuar Group is largely unknown.","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Hydrocarbon source rocks in unconventional plays, Rocky Mountain Region","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"Rocky Mountain Association of Geologists","usgsCitation":"Lillis, P.G., 2016, The Chuar Petroleum System, Arizona and Utah, chap. <i>of</i> Hydrocarbon source rocks in unconventional plays, Rocky Mountain Region, p. 79-136.","productDescription":"58 p.","startPage":"79","endPage":"136","ipdsId":"IP-067009","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":333120,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":333119,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.rmag.org/publications"}],"publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5878a48de4b04df303d95814","contributors":{"authors":[{"text":"Lillis, Paul G. 0000-0002-7508-1699 plillis@usgs.gov","orcid":"https://orcid.org/0000-0002-7508-1699","contributorId":1817,"corporation":false,"usgs":true,"family":"Lillis","given":"Paul","email":"plillis@usgs.gov","middleInitial":"G.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":656022,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70192492,"text":"70192492 - 2016 - Satellite-derived temperature data for monitoring water status in a floodplain forest of the Upper Sabine River, Texas","interactions":[],"lastModifiedDate":"2017-10-26T12:23:04","indexId":"70192492","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3444,"text":"Southeastern Naturalist","active":true,"publicationSubtype":{"id":10}},"title":"Satellite-derived temperature data for monitoring water status in a floodplain forest of the Upper Sabine River, Texas","docAbstract":"<p><span>Decreased water availability due to hydrologic modifications, groundwater withdrawal, and climate change threaten bottomland hardwood (BLH) forest communities. We used satellite-derived (MODIS) land-surface temperature (LST) data to investigate spatial heterogeneity of canopy temperature (an indicator of plant-water status) in a floodplain forest of the upper Sabine River for 2008–2014. High LST pixels were generally further from the river and at higher topographic locations, indicating lower water-availability. Increasing rainfall-derived soil moisture corresponded with decreased heterogeneity of LST between pixels but there was weaker association between Sabine River stage and heterogeneity. Stronger dependence of LST convergence on rainfall rather than river flow suggests that some regions are less hydrologically connected to the river, and vegetation may rely on local precipitation and other contributions to the riparian aquifer to replenish soil moisture. Observed LST variations associated with hydrology encourage further investigation of the utility of this approach for monitoring forest stress, especially with considerations of climate change and continued river management.</span></p>","language":"English","publisher":"Eagle Hill Institute","doi":"10.1656/058.015.0sp911","usgsCitation":"Lemon, M.G., Allen, S.T., Edwards, B., King, S.L., and Keim, R., 2016, Satellite-derived temperature data for monitoring water status in a floodplain forest of the Upper Sabine River, Texas: Southeastern Naturalist, v. 15, no. sp9, p. 90-102, https://doi.org/10.1656/058.015.0sp911.","productDescription":"13 p.","startPage":"90","endPage":"102","ipdsId":"IP-066074","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":347463,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Texas","otherGeospatial":"Upper Sabine River","volume":"15","issue":"sp9","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5a07e98de4b09af898c8cc2c","contributors":{"authors":[{"text":"Lemon, Mary Grace T.","contributorId":198501,"corporation":false,"usgs":false,"family":"Lemon","given":"Mary","email":"","middleInitial":"Grace T.","affiliations":[],"preferred":false,"id":716258,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Allen, Scott T.","contributorId":168409,"corporation":false,"usgs":false,"family":"Allen","given":"Scott","email":"","middleInitial":"T.","affiliations":[{"id":25282,"text":"School of Renewable Natural Resources, Louisiana State University, Baton Rouge, LA","active":true,"usgs":false}],"preferred":false,"id":716259,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Edwards, Brandon L.","contributorId":35231,"corporation":false,"usgs":true,"family":"Edwards","given":"Brandon L.","affiliations":[],"preferred":false,"id":716260,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"King, Sammy L. 0000-0002-5364-6361 sking@usgs.gov","orcid":"https://orcid.org/0000-0002-5364-6361","contributorId":557,"corporation":false,"usgs":true,"family":"King","given":"Sammy","email":"sking@usgs.gov","middleInitial":"L.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":716068,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Keim, Richard F.","contributorId":21858,"corporation":false,"usgs":true,"family":"Keim","given":"Richard F.","affiliations":[],"preferred":false,"id":716261,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70189249,"text":"70189249 - 2016 - High spatial resolution U-Pb geochronology and Pb isotope geochemistry of magnetite-apatite ore from the Pea Ridge iron oxide-apatite deposit, St. Francois Mountains, southeast Missouri, USA","interactions":[],"lastModifiedDate":"2017-07-06T12:53:07","indexId":"70189249","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1472,"text":"Economic Geology","active":true,"publicationSubtype":{"id":10}},"title":"High spatial resolution U-Pb geochronology and Pb isotope geochemistry of magnetite-apatite ore from the Pea Ridge iron oxide-apatite deposit, St. Francois Mountains, southeast Missouri, USA","docAbstract":"<p><span>The Pea Ridge iron oxide-apatite (IOA) deposit is one of the major rhyolite-hosted magnetite deposits of the St. Francois Mountains terrane, which is located within the Mesoproterozoic (1.5–1.3 Ga) Granite-Rhyolite province in the U.S. Midcontinent. Precise and accurate determination of the timing and duration of oreforming processes in this deposit is crucial for understanding its origin and placing it within a deposit-scale and regional geologic context. Apatite and monazite, well-established U-Pb mineral geochronometers, are abundant in the Pea Ridge orebody. However, the potential presence of multiple generations of dateable minerals, processes of dissolution-reprecipitation, and occurrence of micrometer-sized intergrowths and inclusions complicate measurements and interpretations of the geochronological results. Here, we employ a combination of several techniques, including ID-TIMS and high spatial resolution geochronology of apatite and monazite using LA-SC-ICPMS and SHRIMP, and Pb isotope geochemistry of pyrite and magnetite to obtain the first direct age constraints on the formation and alteration history of the Pea Ridge IOA deposit. The oldest apatite TIMS&nbsp;</span><sup>207</sup><span>Pb*/</span><sup>206</sup><span>Pb* dates are 1471 ± 1 and 1468 ± 1 Ma, slightly younger than (but within error of) the ~1474 to ~1473 Ma U-Pb zircon ages of the host rhyolites. Dating of apatite and monazite inclusions within apatite provides evidence for at least one younger metasomatic event at ~1.44 Ga, and possibly multiple superimposed metasomatic events between 1.47 and 1.44 Ga. Lead isotop analyses of pyrite show extremely radiogenic<span>&nbsp;</span></span><sup>206</sup><span>Pb/</span><sup>204</sup><span>Pb ratios up to ~80 unsupported by in situ U decay. This excess radiogenic Pb in pyrite may have been derived from the spatially associated apatite as apatite recrystallized several tens of million years after its formation. The low initial<span>&nbsp;</span></span><sup>206</sup><span>Pb/</span><sup>204</sup><span>Pb ratio of ~16.5 and<span>&nbsp;</span></span><sup>207</sup><span>Pb/</span><sup>204</sup><span>Pb ratio of ~15.4 for individual magnetite grains indicate closed U-Pb system behavior in this mineral and are consistent with derivation of the Pb from a mantle-like source.</span></p>","language":"English","publisher":"Society of Economic Geologists","doi":"10.2113/econgeo.111.8.1915","usgsCitation":"Neymark, L., Holm-Denoma, C.S., Pietruszka, A., Aleinikoff, J.N., Fanning, C.M., Pillers, R.M., and Moscati, R.J., 2016, High spatial resolution U-Pb geochronology and Pb isotope geochemistry of magnetite-apatite ore from the Pea Ridge iron oxide-apatite deposit, St. Francois Mountains, southeast Missouri, USA: Economic Geology, v. 111, no. 8, p. 1915-1933, https://doi.org/10.2113/econgeo.111.8.1915.","productDescription":"19 p.","startPage":"1915","endPage":"1933","ipdsId":"IP-069655","costCenters":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":343411,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Missouri","otherGeospatial":"St. Francois Mountains","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -91,\n              37\n            ],\n            [\n              -90,\n              37\n            ],\n            [\n              -90,\n              38\n            ],\n            [\n              -91,\n              38\n            ],\n            [\n              -91,\n              37\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"111","issue":"8","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2016-11-16","publicationStatus":"PW","scienceBaseUri":"595f4c3de4b0d1f9f057e33e","contributors":{"authors":[{"text":"Neymark, Leonid A. 0000-0003-4190-0278 lneymark@usgs.gov","orcid":"https://orcid.org/0000-0003-4190-0278","contributorId":140338,"corporation":false,"usgs":true,"family":"Neymark","given":"Leonid A.","email":"lneymark@usgs.gov","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true},{"id":318,"text":"Geosciences and Environmental Change Science Center","active":true,"usgs":true}],"preferred":true,"id":703721,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Holm-Denoma, Christopher S. 0000-0003-3229-5440 cholm-denoma@usgs.gov","orcid":"https://orcid.org/0000-0003-3229-5440","contributorId":2442,"corporation":false,"usgs":true,"family":"Holm-Denoma","given":"Christopher","email":"cholm-denoma@usgs.gov","middleInitial":"S.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":703722,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Pietruszka, Aaron 0000-0002-2826-9509 apietruszka@usgs.gov","orcid":"https://orcid.org/0000-0002-2826-9509","contributorId":192031,"corporation":false,"usgs":true,"family":"Pietruszka","given":"Aaron","email":"apietruszka@usgs.gov","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":703723,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Aleinikoff, John N. 0000-0003-3494-6841 jaleinikoff@usgs.gov","orcid":"https://orcid.org/0000-0003-3494-6841","contributorId":1478,"corporation":false,"usgs":true,"family":"Aleinikoff","given":"John","email":"jaleinikoff@usgs.gov","middleInitial":"N.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":703724,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Fanning, C. Mark","contributorId":193428,"corporation":false,"usgs":false,"family":"Fanning","given":"C.","email":"","middleInitial":"Mark","affiliations":[],"preferred":false,"id":703725,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Pillers, Renee M. 0000-0003-4929-1569 rpillers@usgs.gov","orcid":"https://orcid.org/0000-0003-4929-1569","contributorId":2501,"corporation":false,"usgs":true,"family":"Pillers","given":"Renee","email":"rpillers@usgs.gov","middleInitial":"M.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":703726,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Moscati, Richard J. 0000-0002-0818-4401 rmoscati@usgs.gov","orcid":"https://orcid.org/0000-0002-0818-4401","contributorId":2462,"corporation":false,"usgs":true,"family":"Moscati","given":"Richard","email":"rmoscati@usgs.gov","middleInitial":"J.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":703727,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70181015,"text":"70181015 - 2016 - Genome sequence of the photoarsenotrophic bacterium Ectothiorhodospira sp. strain BSL-9, isolated from a hypersaline alkaline arsenic-rich extreme environment","interactions":[],"lastModifiedDate":"2017-02-20T12:12:06","indexId":"70181015","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5099,"text":"Genome Announcements","active":true,"publicationSubtype":{"id":10}},"title":"Genome sequence of the photoarsenotrophic bacterium Ectothiorhodospira sp. strain BSL-9, isolated from a hypersaline alkaline arsenic-rich extreme environment","docAbstract":"<p><span>The full genome sequence of </span><i>Ectothiorhodospira</i><span> sp. strain BSL-9 is reported here. This purple sulfur bacterium encodes an </span><i>arxA</i><span>-type arsenite oxidase within the </span><i>arxB2AB1CD</i><span> gene island and is capable of carrying out “photoarsenotrophy” anoxygenic photosynthetic arsenite oxidation. Its genome is composed of 3.5&nbsp;Mb and has approximately 63% G+C content.</span></p>","language":"English","publisher":"American Society for Microbiology","doi":"10.1128/genomeA.01139-16","usgsCitation":"Hernandez-Maldonado, J., Stoneburner, B., Boren, A., Miller, L., Rosen, M.R., Oremland, R.S., and Saltikov, C.W., 2016, Genome sequence of the photoarsenotrophic bacterium Ectothiorhodospira sp. strain BSL-9, isolated from a hypersaline alkaline arsenic-rich extreme environment: Genome Announcements, v. 4, no. 5, p. 1-2, https://doi.org/10.1128/genomeA.01139-16.","productDescription":"e01139-16; 2 p.","startPage":"1","endPage":"2","ipdsId":"IP-079139","costCenters":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"links":[{"id":470386,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1128/genomea.01139-16","text":"Publisher Index Page"},{"id":335840,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"4","issue":"5","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58ac0e2de4b0ce4410e7d5f6","contributors":{"authors":[{"text":"Hernandez-Maldonado, Jaime","contributorId":179303,"corporation":false,"usgs":false,"family":"Hernandez-Maldonado","given":"Jaime","email":"","affiliations":[],"preferred":false,"id":663289,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Stoneburner, Brendon","contributorId":174071,"corporation":false,"usgs":false,"family":"Stoneburner","given":"Brendon","email":"","affiliations":[{"id":27354,"text":"University of California Santa Cruz, Department of Microbiology and Environmental Toxicology","active":true,"usgs":false}],"preferred":false,"id":663290,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Boren, Alison","contributorId":174072,"corporation":false,"usgs":false,"family":"Boren","given":"Alison","email":"","affiliations":[],"preferred":false,"id":663291,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Miller, Laurence lgmiller@usgs.gov","contributorId":145772,"corporation":false,"usgs":true,"family":"Miller","given":"Laurence","email":"lgmiller@usgs.gov","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"preferred":true,"id":663292,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Rosen, Michael R. 0000-0003-3991-0522 mrosen@usgs.gov","orcid":"https://orcid.org/0000-0003-3991-0522","contributorId":495,"corporation":false,"usgs":true,"family":"Rosen","given":"Michael","email":"mrosen@usgs.gov","middleInitial":"R.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":663293,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Oremland, Ronald S. 0000-0001-7382-0147 roremlan@usgs.gov","orcid":"https://orcid.org/0000-0001-7382-0147","contributorId":931,"corporation":false,"usgs":true,"family":"Oremland","given":"Ronald","email":"roremlan@usgs.gov","middleInitial":"S.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"preferred":true,"id":663288,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Saltikov, Chad W","contributorId":179304,"corporation":false,"usgs":false,"family":"Saltikov","given":"Chad","email":"","middleInitial":"W","affiliations":[],"preferred":false,"id":663294,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70182518,"text":"70182518 - 2016 - Hanging out at the airport: Unusual upside-down perching behavior by Eurasian Jackdaws (Corvus monedula) in a human-dominated environment","interactions":[],"lastModifiedDate":"2018-03-26T11:49:17","indexId":"70182518","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3784,"text":"Wilson Journal of Ornithology","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Hanging out at the airport: Unusual upside-down perching behavior by Eurasian Jackdaws (<i>Corvus monedula</i>) in a human-dominated environment","title":"Hanging out at the airport: Unusual upside-down perching behavior by Eurasian Jackdaws (Corvus monedula) in a human-dominated environment","docAbstract":"<p><span>Animals occupying human-dominated environments show the capacity for behavioral flexibility. Corvids are among the most intelligent synanthropic bird species. During a layover at Schipol Airport in Amsterdam, Netherlands, I photographically documented Eurasian Jackdaws (</span><i><i>Corvus monedula</i>)</i><span> perching upside down from a building cornice. In contrast to other reports of hanging birds, these jackdaws did not forage or play while upside down and appeared to use the perching spot to observe their surroundings. Although Corvids and Psittacines are known to hang upside down, especially in captive situations, such behaviors are rarely documented in the wild, and never before in association with human-built structures.</span></p>","language":"English","publisher":"The Wilson Ornithological Society","doi":"10.1676/15-211.1","usgsCitation":"Katzner, T., 2016, Hanging out at the airport: Unusual upside-down perching behavior by Eurasian Jackdaws (Corvus monedula) in a human-dominated environment: Wilson Journal of Ornithology, v. 128, no. 4, p. 926-930, https://doi.org/10.1676/15-211.1.","productDescription":"5 p.","startPage":"926","endPage":"930","ipdsId":"IP-071449","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":336169,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"128","issue":"4","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58b15439e4b01ccd54fc5e9f","contributors":{"authors":[{"text":"Katzner, Todd E.","contributorId":18893,"corporation":false,"usgs":true,"family":"Katzner","given":"Todd E.","affiliations":[],"preferred":false,"id":671386,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70182771,"text":"70182771 - 2016 - Evolutionary traps as keys to understanding behavioral maladaptation","interactions":[],"lastModifiedDate":"2017-03-01T12:36:53","indexId":"70182771","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5307,"text":"Current Opinion in Behavioral Sciences","active":true,"publicationSubtype":{"id":10}},"title":"Evolutionary traps as keys to understanding behavioral maladaptation","docAbstract":"<p><span>Evolutionary traps are severe cases of behavioral maladaptation that occur when, due to human activity, the cues animals use to guide their behavior become uncoupled from their fitness consequences. The result is that animals can prefer the most dangerous resources or behaviors, even when better options are available. Traps are increasingly common and represent a significant wildlife conservation problem. Understanding of the more proximate sensory-cognitive mechanisms underpinning traps remains poor, which highlights the need for interdisciplinary and collaborative approaches to investigating traps. Key to advancing basic trap theory and its conservation applications will be the development of appropriate and tractable model systems to investigate the mechanisms that cause traps within species, and how mechanisms vary across species.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.cobeha.2016.08.007","usgsCitation":"Robertson, B.A., and Chalfoun, A., 2016, Evolutionary traps as keys to understanding behavioral maladaptation: Current Opinion in Behavioral Sciences, v. 12, p. 12-17, https://doi.org/10.1016/j.cobeha.2016.08.007.","productDescription":"6 p.","startPage":"12","endPage":"17","ipdsId":"IP-074196","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":336749,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"12","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58b7eba5e4b01ccd5500baef","contributors":{"authors":[{"text":"Robertson, Bruce A.","contributorId":171947,"corporation":false,"usgs":false,"family":"Robertson","given":"Bruce","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":680422,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Chalfoun, Anna","contributorId":184161,"corporation":false,"usgs":true,"family":"Chalfoun","given":"Anna","affiliations":[],"preferred":false,"id":673693,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70185064,"text":"70185064 - 2016 - Modeling the effects of tile drain placement on the hydrologic function of farmed prairie wetlands","interactions":[],"lastModifiedDate":"2017-03-14T11:39:36","indexId":"70185064","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2529,"text":"Journal of the American Water Resources Association","active":true,"publicationSubtype":{"id":10}},"title":"Modeling the effects of tile drain placement on the hydrologic function of farmed prairie wetlands","docAbstract":"<p><span>The early 2000s saw large increases in agricultural tile drainage in the eastern Dakotas of North America. Agricultural practices that drain wetlands directly are sometimes limited by wetland protection programs. Little is known about the impacts of tile drainage beyond the delineated boundaries of wetlands in upland catchments that may be in agricultural production. A series of experiments were conducted using the well-published model WETLANDSCAPE that revealed the potential for wetlands to have significantly shortened surface water inundation periods and lower mean depths when tile is placed in certain locations beyond the wetland boundary. Under the soil conditions found in agricultural areas of South Dakota in North America, wetland hydroperiod was found to be more sensitive to the depth that drain tile is installed relative to the bottom of the wetland basin than to distance-based setbacks. Because tile drainage can change the hydrologic conditions of wetlands, even when deployed in upland catchments, tile drainage plans should be evaluated more closely for the potential impacts they might have on the ecological services that these wetlands currently provide. Future research should investigate further how drainage impacts are affected by climate variability and change.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/1752-1688.12471","usgsCitation":"Werner, B., Tracy, J., Johnson, W.C., Voldseth, R.A., Guntenspergen, G.R., and Millett, B., 2016, Modeling the effects of tile drain placement on the hydrologic function of farmed prairie wetlands: Journal of the American Water Resources Association, v. 52, no. 6, p. 1482-1492, https://doi.org/10.1111/1752-1688.12471.","productDescription":"11 p.","startPage":"1482","endPage":"1492","ipdsId":"IP-067298","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":488561,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://digitalcommons.unl.edu/usgsstaffpub/1156","text":"External Repository"},{"id":337490,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"52","issue":"6","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2016-09-29","publicationStatus":"PW","scienceBaseUri":"58c90124e4b0849ce97abcc1","contributors":{"authors":[{"text":"Werner, Brett","contributorId":189217,"corporation":false,"usgs":false,"family":"Werner","given":"Brett","email":"","affiliations":[],"preferred":false,"id":684132,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Tracy, John","contributorId":189218,"corporation":false,"usgs":false,"family":"Tracy","given":"John","email":"","affiliations":[],"preferred":false,"id":684133,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Johnson, W. Carter","contributorId":189219,"corporation":false,"usgs":false,"family":"Johnson","given":"W.","email":"","middleInitial":"Carter","affiliations":[],"preferred":false,"id":684134,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Voldseth, Richard A.","contributorId":189220,"corporation":false,"usgs":false,"family":"Voldseth","given":"Richard","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":684135,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Guntenspergen, Glenn R. 0000-0002-8593-0244 glenn_guntenspergen@usgs.gov","orcid":"https://orcid.org/0000-0002-8593-0244","contributorId":2885,"corporation":false,"usgs":true,"family":"Guntenspergen","given":"Glenn","email":"glenn_guntenspergen@usgs.gov","middleInitial":"R.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":684131,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Millett, Bruce","contributorId":189221,"corporation":false,"usgs":false,"family":"Millett","given":"Bruce","email":"","affiliations":[],"preferred":false,"id":684136,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70185049,"text":"70185049 - 2016 - Comment on “Reconciliation of the Devils Hole climate record with orbital forcing”","interactions":[],"lastModifiedDate":"2017-03-13T16:11:08","indexId":"70185049","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3338,"text":"Science","active":true,"publicationSubtype":{"id":10}},"title":"Comment on “Reconciliation of the Devils Hole climate record with orbital forcing”","docAbstract":"<p><span>Moseley </span><i>et al</i><span>. (Reports, 8 January 2016, p. 165) postulate an increase in dissolved thorium isotope </span><sup>230</sup><span>Th with depth below the water table as the explanation for the differing ages of Termination II. Flow of geothermal water through the Devils Hole caverns precludes this explanation. Deposition of younger secondary calcite into the initial porosity of the calcite comprising their cores is a plausible alternate explanation.</span></p>","language":"English","publisher":"Science","doi":"10.1126/science.aaf7718","usgsCitation":"Winograd, I.J., 2016, Comment on “Reconciliation of the Devils Hole climate record with orbital forcing”: Science, v. 354, no. 6310, p. 296-296, https://doi.org/10.1126/science.aaf7718.","productDescription":"1 p.","startPage":"296","endPage":"296","ipdsId":"IP-075099","costCenters":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"links":[{"id":470390,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1126/science.aaf7718","text":"Publisher Index Page"},{"id":337466,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"354","issue":"6310","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58c7af9ce4b0849ce9795e78","contributors":{"authors":[{"text":"Winograd, Isaac J. ijwinogr@usgs.gov","contributorId":4643,"corporation":false,"usgs":true,"family":"Winograd","given":"Isaac","email":"ijwinogr@usgs.gov","middleInitial":"J.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":684074,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70185058,"text":"70185058 - 2016 - Avoiding decline: Fostering resilience and sustainability in midsize cities","interactions":[],"lastModifiedDate":"2017-03-13T15:17:51","indexId":"70185058","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3504,"text":"Sustainability","active":true,"publicationSubtype":{"id":10}},"title":"Avoiding decline: Fostering resilience and sustainability in midsize cities","docAbstract":"<p><span>Eighty-five percent of United States citizens live in urban areas. However, research surrounding the resilience and sustainability of complex urban systems focuses largely on coastal megacities (&gt;1 million people). Midsize cities differ from their larger counterparts due to tight urban-rural feedbacks with their immediate natural environments that result from heavy reliance and close management of local ecosystem services. They also may be less path-dependent than larger cities due to shorter average connection length among system components, contributing to higher responsiveness among social, infrastructural, and ecological feedbacks. These distinct midsize city features call for a framework that organizes information and concepts concerning the sustainability of midsize cities specifically. We argue that an integrative approach is necessary to capture properties emergent from the complex interactions of the social, infrastructural, and ecological subsystems that comprise a city system. We suggest approaches to estimate the relative resilience of midsize cities, and include an example assessment to illustrate one such estimation approach. Resilience assessments of a midsize city can be used to examine why some cities end up on sustainable paths while others diverge to unsustainable paths, and which feedbacks may be partially responsible. They also provide insight into how city planners and decision makers can use information about the resilience of midsize cities undergoing growth or shrinkage relative to their larger and smaller counterparts, to transform them into long-term, sustainable social-ecological systems.</span></p>","language":"English","publisher":"MDPI","doi":"10.3390/su8090844","usgsCitation":"Allen, C.R., Birge, H.E., Bartelt-Hunt, S., Bevans, R.A., Burnett, J., Cosens, B., Cai, X., Garmestani, A.S., Linkov, I., Scott, E.A., Solomon, M.D., and Uden, D.R., 2016, Avoiding decline: Fostering resilience and sustainability in midsize cities: Sustainability, v. 8, no. 9, https://doi.org/10.3390/su8090844.","ipdsId":"IP-076510","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":470367,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3390/su8090844","text":"Publisher Index Page"},{"id":337457,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"8","issue":"9","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-08-26","publicationStatus":"PW","scienceBaseUri":"58c7af9be4b0849ce9795e76","contributors":{"authors":[{"text":"Allen, Craig R. 0000-0001-8655-8272 allencr@usgs.gov","orcid":"https://orcid.org/0000-0001-8655-8272","contributorId":1979,"corporation":false,"usgs":true,"family":"Allen","given":"Craig","email":"allencr@usgs.gov","middleInitial":"R.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":684108,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Birge, Hannah E.","contributorId":166737,"corporation":false,"usgs":false,"family":"Birge","given":"Hannah","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":684141,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bartelt-Hunt, Shannon","contributorId":189223,"corporation":false,"usgs":false,"family":"Bartelt-Hunt","given":"Shannon","email":"","affiliations":[],"preferred":false,"id":684142,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Bevans, Rebecca A.","contributorId":189134,"corporation":false,"usgs":false,"family":"Bevans","given":"Rebecca","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":684143,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Burnett, Jessica","contributorId":189224,"corporation":false,"usgs":false,"family":"Burnett","given":"Jessica","affiliations":[],"preferred":false,"id":684144,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Cosens, Barbara","contributorId":166744,"corporation":false,"usgs":false,"family":"Cosens","given":"Barbara","email":"","affiliations":[],"preferred":false,"id":684145,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Cai, Ximing","contributorId":149230,"corporation":false,"usgs":false,"family":"Cai","given":"Ximing","email":"","affiliations":[{"id":17685,"text":"University of Illinois, Champagne-Urbana","active":true,"usgs":false}],"preferred":false,"id":684146,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Garmestani, Ahjond S.","contributorId":77285,"corporation":false,"usgs":true,"family":"Garmestani","given":"Ahjond","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":684147,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Linkov, Igor","contributorId":172407,"corporation":false,"usgs":false,"family":"Linkov","given":"Igor","email":"","affiliations":[],"preferred":false,"id":684148,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Scott, Elizabeth A.","contributorId":189225,"corporation":false,"usgs":false,"family":"Scott","given":"Elizabeth","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":684149,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Solomon, Mark D.","contributorId":189226,"corporation":false,"usgs":false,"family":"Solomon","given":"Mark","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":684150,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Uden, Daniel R.","contributorId":74258,"corporation":false,"usgs":true,"family":"Uden","given":"Daniel","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":684151,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70179638,"text":"70179638 - 2016 - Multi-decadal increases in dissolved organic carbon and alkalinity flux from the Mackenzie drainage basin to the Arctic Ocean","interactions":[],"lastModifiedDate":"2017-01-09T11:24:20","indexId":"70179638","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1562,"text":"Environmental Research Letters","active":true,"publicationSubtype":{"id":10}},"title":"Multi-decadal increases in dissolved organic carbon and alkalinity flux from the Mackenzie drainage basin to the Arctic Ocean","docAbstract":"<p><span>Riverine exports of organic and inorganic carbon (OC, IC) to oceans are intricately linked to processes occurring on land. Across high latitudes, thawing permafrost, alteration of hydrologic flow paths, and changes in vegetation may all affect this flux, with subsequent implications for regional and global carbon (C) budgets. Using a unique, multi-decadal dataset of continuous discharge coupled with water chemistry measurements for the Mackenzie River, we show major increases in dissolved OC (DOC) and IC (as alkalinity) fluxes since the early 1970s, for a watershed that covers 1.8 M km</span><sup>2</sup><span> of northwestern Canada, and provides substantial inputs of freshwater and biogeochemical constituents to the Arctic Ocean. Over a 39-year period of record, DOC flux at the Mackenzie mouth increased by 39.3% (44.5&nbsp;±&nbsp;22.6 Gmol), while alkalinity flux increased by 12.5% (61.5&nbsp;±&nbsp;60.1 Gmol). Isotopic analyses and substantial increases in sulfate flux indicate that increases in alkalinity are driven by accelerating sulfide oxidation, a process that liberates IC from rock and soils in the absence of CO</span><sub>2</sub><span> consumption. Seasonal and sub-catchment trends suggest that permafrost thaw plays an important role in the observed increases in DOC and alkalinity: sub-catchment increases for all constituents are confined to northern, permafrost-affected regions, while observed increases in autumn to winter are consistent with documented landscape-scale changes that have resulted from changing thaw dynamics. This increase in DOC and sulfide-derived alkalinity represents a substantial intensification of land-to-ocean C mobilization, at a level that is significant within the regional C budget. The change we observe, for example, is similar to current and projected future rates of CO</span><sub>2</sub><span> consumption by weathering in the Mackenzie basin.</span></p>","language":"English","publisher":"IOP Science","doi":"10.1088/1748-9326/11/5/054015","usgsCitation":"Tank, S.E., Striegl, R.G., McClelland, J.W., and Kokelj, S.V., 2016, Multi-decadal increases in dissolved organic carbon and alkalinity flux from the Mackenzie drainage basin to the Arctic Ocean: Environmental Research Letters, v. 11, no. 5, p. 1-10, https://doi.org/10.1088/1748-9326/11/5/054015.","productDescription":"Article 054015; 10 p.","startPage":"1","endPage":"10","ipdsId":"IP-067063","costCenters":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"links":[{"id":470414,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1088/1748-9326/11/5/054015","text":"Publisher Index Page"},{"id":332985,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"11","issue":"5","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-11","publicationStatus":"PW","scienceBaseUri":"5874b0ade4b0a829a320bb65","contributors":{"authors":[{"text":"Tank, Suzanne E.","contributorId":150795,"corporation":false,"usgs":false,"family":"Tank","given":"Suzanne","email":"","middleInitial":"E.","affiliations":[{"id":18102,"text":"University of Alberta, Edmonton, Canada","active":true,"usgs":false}],"preferred":false,"id":658001,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Striegl, Robert G. 0000-0002-8251-4659 rstriegl@usgs.gov","orcid":"https://orcid.org/0000-0002-8251-4659","contributorId":1630,"corporation":false,"usgs":true,"family":"Striegl","given":"Robert","email":"rstriegl@usgs.gov","middleInitial":"G.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true},{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":36183,"text":"Hydro-Ecological Interactions Branch","active":true,"usgs":true}],"preferred":false,"id":658000,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"McClelland, James W.","contributorId":94905,"corporation":false,"usgs":true,"family":"McClelland","given":"James","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":658002,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kokelj, Steven V.","contributorId":178128,"corporation":false,"usgs":false,"family":"Kokelj","given":"Steven","email":"","middleInitial":"V.","affiliations":[],"preferred":false,"id":658003,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70184485,"text":"70184485 - 2016 - New organic reference materials for hydrogen, carbon, and nitrogen stable isotope-ratio measurements: caffeines, n-alkanes, fatty acid methyl esters, glycines, L-valines, polyethylenes, and oils","interactions":[],"lastModifiedDate":"2017-03-10T10:18:34","indexId":"70184485","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":761,"text":"Analytical Chemistry","active":true,"publicationSubtype":{"id":10}},"title":"New organic reference materials for hydrogen, carbon, and nitrogen stable isotope-ratio measurements: caffeines, n-alkanes, fatty acid methyl esters, glycines, L-valines, polyethylenes, and oils","docAbstract":"<p><span>An international project developed, quality-tested, and determined isotope−δ values of 19 new organic reference materials (RMs) for hydrogen, carbon, and nitrogen stable isotope-ratio measurements, in addition to analyzing pre-existing RMs NBS 22 (oil), IAEA-CH-7 (polyethylene foil), and IAEA-600 (caffeine). These new RMs enable users to normalize measurements of samples to isotope−δ scales. The RMs span a range of δ</span><sup>2</sup><span>H</span><sub>VSMOW-SLAP</sub><span> values from −210.8 to +397.0 mUr or ‰, for δ</span><sup>13</sup><span>C</span><sub>VPDB-LSVEC</sub><span> from −40.81 to +0.49 mUr and for δ</span><sup>15</sup><span>N</span><sub>Air</sub><span> from −5.21 to +61.53 mUr. Many of the new RMs are amenable to gas and liquid chromatography. The RMs include triads of isotopically contrasting caffeines, C</span><sub>16</sub> <i>n</i><span>-alkanes, </span><i>n</i><span>-C</span><sub>20</sub><span>-fatty acid methyl esters (FAMEs), glycines, and </span><span class=\"smallcaps\">l</span><span>-valines, together with polyethylene powder and string, one </span><i>n</i><span>-C</span><sub>17</sub><span>-FAME, a vacuum oil (NBS 22a) to replace NBS 22 oil, and a </span><sup>2</sup><span>H-enriched vacuum oil. A total of 11 laboratories from 7 countries used multiple analytical approaches and instrumentation for 2-point isotopic normalization against international primary measurement standards. The use of reference waters in silver tubes allowed direct normalization of δ</span><sup>2</sup><span>H values of organic materials against isotopic reference waters following the principle of identical treatment. Bayesian statistical analysis yielded the mean values reported here. New RMs are numbered from USGS61 through USGS78, in addition to NBS 22a. Because of exchangeable hydrogen, amino acid RMs currently are recommended only for carbon- and nitrogen-isotope measurements. Some amino acids contain </span><sup>13</sup><span>C and carbon-bound organic </span><sup>2</sup><span>H-enrichments at different molecular sites to provide RMs for potential site-specific isotopic analysis in future studies.</span></p>","language":"English","publisher":"ACS Publications","doi":"10.1021/acs.analchem.5b04392","usgsCitation":"Schimmelmann, A., Qi, H., Coplen, T.B., Brand, W.A., Fong, J., Meier-Augenstein, W., Kemp, H.F., Toman, B., Ackermann, A., Assonov, S., Aerts-Bijma, A., Brejcha, R., Chikaraishi, Y., Darwish, T., Elsner, M., Gehre, M., Geilmann, H., Groning, M., Helie, J., Herrero-Martin, S., Meijer, H.A., Sauer, P.E., Sessions, A.L., and Werner, R.A., 2016, New organic reference materials for hydrogen, carbon, and nitrogen stable isotope-ratio measurements: caffeines, n-alkanes, fatty acid methyl esters, glycines, L-valines, polyethylenes, and oils: Analytical Chemistry, v. 88, no. 8, p. 4294-4302, https://doi.org/10.1021/acs.analchem.5b04392.","productDescription":"9 p.","startPage":"4294","endPage":"4302","ipdsId":"IP-073415","costCenters":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"links":[{"id":470392,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://research.rug.nl/en/publications/cbe77820-c3cc-4440-b158-d120cd5bd01d","text":"External Repository"},{"id":337298,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"88","issue":"8","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2016-03-31","publicationStatus":"PW","scienceBaseUri":"58c3c937e4b0f37a93ee9ae5","chorus":{"doi":"10.1021/acs.analchem.5b04392","url":"http://dx.doi.org/10.1021/acs.analchem.5b04392","publisher":"American Chemical Society (ACS)","authors":"Schimmelmann Arndt, Qi Haiping, Coplen Tyler B., Brand Willi A., Fong Jon, Meier-Augenstein Wolfram, Kemp Helen F., Toman Blaza, Ackermann Annika, Assonov Sergey, Aerts-Bijma Anita T., Brejcha Ramona, Chikaraishi Yoshito, Darwish Tamim, Elsner Martin, Gehre Matthias, Geilmann Heike, Gröning Manfred, Hélie Jean-François, Herrero-Martín Sara, Meijer Harro A. J., Sauer Peter E., Sessions Alex L., Werner Roland A.","journalName":"Analytical Chemistry","publicationDate":"4/19/2016"},"contributors":{"authors":[{"text":"Schimmelmann, Arndt","contributorId":140051,"corporation":false,"usgs":false,"family":"Schimmelmann","given":"Arndt","affiliations":[{"id":13366,"text":"Indiana University, Bloomington, Indiana, USA","active":true,"usgs":false}],"preferred":false,"id":681679,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Qi, Haiping 0000-0002-8339-744X haipingq@usgs.gov","orcid":"https://orcid.org/0000-0002-8339-744X","contributorId":507,"corporation":false,"usgs":true,"family":"Qi","given":"Haiping","email":"haipingq@usgs.gov","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":681680,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Coplen, Tyler B. 0000-0003-4884-6008 tbcoplen@usgs.gov","orcid":"https://orcid.org/0000-0003-4884-6008","contributorId":508,"corporation":false,"usgs":true,"family":"Coplen","given":"Tyler","email":"tbcoplen@usgs.gov","middleInitial":"B.","affiliations":[{"id":37464,"text":"WMA - Laboratory & Analytical Services Division","active":true,"usgs":true},{"id":27111,"text":"National Water Quality Program","active":true,"usgs":true},{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":681678,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Brand, Willi A.","contributorId":33091,"corporation":false,"usgs":false,"family":"Brand","given":"Willi","email":"","middleInitial":"A.","affiliations":[{"id":13365,"text":"Max-Planck Institute for Biogeochemistry, Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":681681,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Fong, Jon","contributorId":187790,"corporation":false,"usgs":false,"family":"Fong","given":"Jon","email":"","affiliations":[],"preferred":false,"id":681682,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Meier-Augenstein, Wolfram","contributorId":187791,"corporation":false,"usgs":false,"family":"Meier-Augenstein","given":"Wolfram","email":"","affiliations":[],"preferred":false,"id":681683,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Kemp, Helen F.","contributorId":187792,"corporation":false,"usgs":false,"family":"Kemp","given":"Helen","email":"","middleInitial":"F.","affiliations":[],"preferred":false,"id":681684,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Toman, Blaza","contributorId":187793,"corporation":false,"usgs":false,"family":"Toman","given":"Blaza","email":"","affiliations":[],"preferred":false,"id":681685,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Ackermann, Annika","contributorId":187794,"corporation":false,"usgs":false,"family":"Ackermann","given":"Annika","email":"","affiliations":[],"preferred":false,"id":681686,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Assonov, Sergey","contributorId":187795,"corporation":false,"usgs":false,"family":"Assonov","given":"Sergey","affiliations":[],"preferred":false,"id":681687,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Aerts-Bijma, Anita","contributorId":187796,"corporation":false,"usgs":false,"family":"Aerts-Bijma","given":"Anita","affiliations":[],"preferred":false,"id":681688,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Brejcha, Ramona","contributorId":187797,"corporation":false,"usgs":false,"family":"Brejcha","given":"Ramona","email":"","affiliations":[],"preferred":false,"id":681689,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Chikaraishi, Yoshito","contributorId":187798,"corporation":false,"usgs":false,"family":"Chikaraishi","given":"Yoshito","email":"","affiliations":[],"preferred":false,"id":681690,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Darwish, Tamim","contributorId":187799,"corporation":false,"usgs":false,"family":"Darwish","given":"Tamim","email":"","affiliations":[],"preferred":false,"id":681691,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Elsner, Martin","contributorId":187800,"corporation":false,"usgs":false,"family":"Elsner","given":"Martin","email":"","affiliations":[],"preferred":false,"id":681692,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Gehre, Matthias","contributorId":34004,"corporation":false,"usgs":false,"family":"Gehre","given":"Matthias","email":"","affiliations":[],"preferred":false,"id":681693,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Geilmann, Heike","contributorId":41303,"corporation":false,"usgs":false,"family":"Geilmann","given":"Heike","email":"","affiliations":[{"id":13365,"text":"Max-Planck Institute for Biogeochemistry, Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":681694,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Groning, Manfred","contributorId":187801,"corporation":false,"usgs":false,"family":"Groning","given":"Manfred","email":"","affiliations":[],"preferred":false,"id":681695,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Helie, Jean-Francois","contributorId":187802,"corporation":false,"usgs":false,"family":"Helie","given":"Jean-Francois","email":"","affiliations":[],"preferred":false,"id":681696,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Herrero-Martin, Sara","contributorId":187803,"corporation":false,"usgs":false,"family":"Herrero-Martin","given":"Sara","email":"","affiliations":[],"preferred":false,"id":681697,"contributorType":{"id":1,"text":"Authors"},"rank":20},{"text":"Meijer, Harro A.J.","contributorId":187804,"corporation":false,"usgs":false,"family":"Meijer","given":"Harro","email":"","middleInitial":"A.J.","affiliations":[],"preferred":false,"id":681698,"contributorType":{"id":1,"text":"Authors"},"rank":21},{"text":"Sauer, Peter E.","contributorId":187805,"corporation":false,"usgs":false,"family":"Sauer","given":"Peter","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":681699,"contributorType":{"id":1,"text":"Authors"},"rank":22},{"text":"Sessions, Alex L.","contributorId":172980,"corporation":false,"usgs":false,"family":"Sessions","given":"Alex","email":"","middleInitial":"L.","affiliations":[{"id":27133,"text":"Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena CA","active":true,"usgs":false}],"preferred":false,"id":681700,"contributorType":{"id":1,"text":"Authors"},"rank":23},{"text":"Werner, Roland A.","contributorId":187806,"corporation":false,"usgs":false,"family":"Werner","given":"Roland","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":681701,"contributorType":{"id":1,"text":"Authors"},"rank":24}]}}
,{"id":70186173,"text":"70186173 - 2016 - White-tailed deer (Odocoileus virginianus) subsidize gray wolves (Canis lupus) during a moose (Alces americanus) decline: A case of apparent competition?","interactions":[],"lastModifiedDate":"2017-03-30T15:15:38","indexId":"70186173","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1163,"text":"Canadian Field-Naturalist","active":true,"publicationSubtype":{"id":10}},"title":"White-tailed deer (Odocoileus virginianus) subsidize gray wolves (Canis lupus) during a moose (Alces americanus) decline: A case of apparent competition?","docAbstract":"<p><span>Moose (</span><i>Alces americanus</i><span>) in northeastern Minnesota have declined by 55% since 2006. Although the cause is unresolved, some studies have suggested that Gray Wolves (</span><i>Canis lupus</i><span>) contributed to the decline. After the Moose decline, wolves could either decline or switch prey. To determine which occurred in our study area, we compared winter wolf counts and summer diet before and after the Moose decline. While wolf numbers in our study area nearly doubled from 23 in winter 2002 to an average of 41 during winters 2011–2013, calf:cow ratios (the number of calves per cow observed during winter surveys) in the wider Moose range more than halved from 0.93 in 2002 to an average of 0.31 during 2011–2013. Compared to summer 2002, wolves in summers 2011–2013 consumed fewer Moose and more White-tailed Deer (</span><i>Odocoileus virginianus</i><span>). While deer densities were similar during each period, average vulnerability, as reflected by winter severity, was greater during 2011–2013 than 2002, probably explaining the wolf increase. During the wolf increase Moose calves remained a summer food item. These findings suggest that in part of the Moose range, deer subsidized wolf numbers while wolves also preyed on Moose calves. This contributed to a Moose decline and is a possible case of apparent competition and inverse-density-dependent predation.</span></p>","language":"English","publisher":"Canadian Journal of Zoology","doi":"10.22621/cfn.v130i4.1924","usgsCitation":"Barber-Meyer, S., and Mech, L.D., 2016, White-tailed deer (Odocoileus virginianus) subsidize gray wolves (Canis lupus) during a moose (Alces americanus) decline: A case of apparent competition?: Canadian Field-Naturalist, v. 130, no. 4, p. 308-314, https://doi.org/10.22621/cfn.v130i4.1924.","productDescription":"7 p.","startPage":"308","endPage":"314","ipdsId":"IP-074112","costCenters":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":470353,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.22621/cfn.v130i4.1924","text":"Publisher Index Page"},{"id":338842,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"130","issue":"4","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"noUsgsAuthors":false,"publicationDate":"2017-03-29","publicationStatus":"PW","scienceBaseUri":"58de194fe4b02ff32c699ca5","contributors":{"authors":[{"text":"Barber-Meyer, Shannon 0000-0002-3048-2616 sbarber-meyer@usgs.gov","orcid":"https://orcid.org/0000-0002-3048-2616","contributorId":173861,"corporation":false,"usgs":true,"family":"Barber-Meyer","given":"Shannon","email":"sbarber-meyer@usgs.gov","affiliations":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":687746,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mech, L. David 0000-0003-3944-7769 david_mech@usgs.gov","orcid":"https://orcid.org/0000-0003-3944-7769","contributorId":2518,"corporation":false,"usgs":true,"family":"Mech","given":"L.","email":"david_mech@usgs.gov","middleInitial":"David","affiliations":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":687747,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70182074,"text":"70182074 - 2016 - Increased prevalence of antibiotic-resistant E. coli in gulls sampled in southcentral Alaska is associated with urban environments","interactions":[],"lastModifiedDate":"2018-07-15T18:35:43","indexId":"70182074","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5083,"text":"Infection Ecology and Epidemiology","active":true,"publicationSubtype":{"id":10}},"title":"Increased prevalence of antibiotic-resistant E. coli in gulls sampled in southcentral Alaska is associated with urban environments","docAbstract":"<div id=\"st1\" class=\"NLM_sec NLM_sec_level_1\"><p id=\"_i1\" class=\"section-heading-2\"><strong>Background</strong></p><p>Antibiotic-resistant bacteria pose challenges to healthcare delivery systems globally; however, limited information is available regarding the prevalence and spread of such bacteria in the environment. The aim of this study was to compare the prevalence of antibiotic-resistant bacteria in large-bodied gulls (<i>Larus</i> spp.) at urban and remote locations in Southcentral Alaska to gain inference into the association between antibiotic resistance in wildlife and anthropogenically influenced habitats.</p></div><div id=\"st2\" class=\"NLM_sec NLM_sec_level_1\"><p id=\"_i2\" class=\"section-heading-2\"><strong>Methods</strong></p><p><i>Escherichia coli</i> was cultured (<i>n</i>=115 isolates) from fecal samples of gulls (n=160) collected from a remote location, Middleton Island, and a more urban setting on the Kenai Peninsula.</p></div><div id=\"st3\" class=\"NLM_sec NLM_sec_level_1\"><p id=\"_i3\" class=\"section-heading-2\"><strong>Results</strong></p><p>Screening of <i>E. coli</i> from fecal samples collected from glaucous-winged gulls (<i>Larus glaucescens</i>) at Middleton Island revealed 8% of isolates were resistant to one or more antibiotics and 2% of the isolates were resistant to three or more antibiotics. In contrast, 55% of <i>E. coli</i> isolates derived from fecal samples collected from large-bodied gulls (i.e. glaucous, herring [<i>Larus argentatus</i>], and potentially hybrid gulls) on the Kenai Peninsula were resistant to one or more antibiotics and 22% were resistant to three or more antibiotics. In addition, total of 16% of the gull samples from locations on the Kenai Peninsula harbored extended-spectrum cephalosporin-resistant <i>E. coli</i> isolates (extended-spectrum beta-lactamases [ESBL] and plasmid-encoded AmpC [pAmpC]), in contrast to Middleton Island where no ESBL- or pAmpC-producing isolates were detected.</p></div><div id=\"st4\" class=\"NLM_sec NLM_sec_level_1\"><p id=\"_i4\" class=\"section-heading-2\"><strong>Conclusion</strong></p><p>Our findings indicate that increased prevalence of antibiotic resistance is associated with urban environments in Southcentral Alaska and presumably influenced by anthropogenic impacts. Further investigation is warranted to assess how migratory birds may maintain and spread antimicrobial-resistant bacteria of relevance to human and animal health.</p></div>","language":"English","publisher":"Taylor & Francis","doi":"10.3402/iee.v6.32334","usgsCitation":"Atterby, C., Ramey, A.M., Gustafsson Hall, G., Jarhult, J., Borjesson, S., and Bonnedahl, J., 2016, Increased prevalence of antibiotic-resistant E. coli in gulls sampled in southcentral Alaska is associated with urban environments: Infection Ecology and Epidemiology, v. 6, no. 1, p. 1-7, https://doi.org/10.3402/iee.v6.32334.","productDescription":"Article 32334; 7 p.","startPage":"1","endPage":"7","ipdsId":"IP-076075","costCenters":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"links":[{"id":470391,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3402/iee.v6.32334","text":"Publisher Index Page"},{"id":335681,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -151.67724609374997,\n              59.271494782025684\n            ],\n            [\n              -146.085205078125,\n              59.271494782025684\n            ],\n            [\n              -146.085205078125,\n              61.17503266354878\n            ],\n            [\n              -151.67724609374997,\n              61.17503266354878\n            ],\n            [\n              -151.67724609374997,\n              59.271494782025684\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"6","issue":"1","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-09-19","publicationStatus":"PW","scienceBaseUri":"58a6c82be4b025c464286262","contributors":{"authors":[{"text":"Atterby, Clara","contributorId":181796,"corporation":false,"usgs":false,"family":"Atterby","given":"Clara","email":"","affiliations":[],"preferred":false,"id":669550,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ramey, Andrew M. 0000-0002-3601-8400 aramey@usgs.gov","orcid":"https://orcid.org/0000-0002-3601-8400","contributorId":1872,"corporation":false,"usgs":true,"family":"Ramey","given":"Andrew","email":"aramey@usgs.gov","middleInitial":"M.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":669463,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Gustafsson Hall, Gabriel","contributorId":181797,"corporation":false,"usgs":false,"family":"Gustafsson Hall","given":"Gabriel","email":"","affiliations":[],"preferred":false,"id":669551,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Jarhult, Josef","contributorId":181798,"corporation":false,"usgs":false,"family":"Jarhult","given":"Josef","affiliations":[],"preferred":false,"id":669552,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Borjesson, Stefan","contributorId":181799,"corporation":false,"usgs":false,"family":"Borjesson","given":"Stefan","email":"","affiliations":[],"preferred":false,"id":669553,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Bonnedahl, Jonas","contributorId":181800,"corporation":false,"usgs":false,"family":"Bonnedahl","given":"Jonas","email":"","affiliations":[],"preferred":false,"id":669554,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70191103,"text":"70191103 - 2016 - Survival and metamorphosis of larval sea lamprey (Petromyzon marinus) residing in Lakes Michigan and Huron near river mouths","interactions":[],"lastModifiedDate":"2018-03-28T11:21:45","indexId":"70191103","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2330,"text":"Journal of Great Lakes Research","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Survival and metamorphosis of larval sea lamprey (<i>Petromyzon marinus</i>) residing in Lakes Michigan and Huron near river mouths","title":"Survival and metamorphosis of larval sea lamprey (Petromyzon marinus) residing in Lakes Michigan and Huron near river mouths","docAbstract":"<p><span>Although population demographics of larval lampreys in streams have been studied extensively, demographics in lake environments have not. Here, we estimated survival and rates of metamorphosis for larval sea lamprey (</span><i>Petromyzon marinus</i><span>) populations residing in the Great Lakes near river mouths (hereafter termed lentic areas). Tagged larvae were stocked and a Bayesian multi-state tag-recovery model was used to investigate population parameters associated with tag recovery, including survival and metamorphosis probabilities. Compared to previous studies of larvae in streams, larval growth in lentic areas was substantially slower (Brody growth coefficient</span><span>&nbsp;</span><span>=</span><span>&nbsp;</span><span>0.00132; estimate based on the recovery of six tagged larvae), survival was slightly greater (annual survival</span><span>&nbsp;</span><span>=</span><span>&nbsp;</span><span>63%), and the length at which 50% of the larvae would be expected to metamorphose was substantially shorter (126</span><span>&nbsp;</span><span>mm). Stochastic simulations were used to estimate the production of parasitic stage (juvenile) sea lamprey from a hypothetical population of larvae in a lentic environment. Production of juvenile sea lamprey was substantial because, even though larval growth in these environments was slow relative to stream environments, survival was high and length at metamorphosis was less. However, estimated production of juvenile sea lamprey was less for the lentic environment than for similar simulations for river environments where larvae grew faster. In circumstances where the cost to kill a larva with lampricide was equal and control funds are limited, sea lamprey control effort may be best directed toward larvae in streams with fast-growing larvae, because stream-produced larvae will most likely contribute to juvenile sea lamprey populations.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jglr.2016.09.003","usgsCitation":"Johnson, N.S., Brenden, T.O., Swink, W.D., and Lipps, M.A., 2016, Survival and metamorphosis of larval sea lamprey (Petromyzon marinus) residing in Lakes Michigan and Huron near river mouths: Journal of Great Lakes Research, v. 42, no. 6, p. 1461-1469, https://doi.org/10.1016/j.jglr.2016.09.003.","productDescription":"9 p.","startPage":"1461","endPage":"1469","ipdsId":"IP-079098","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":346104,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":"Lake Huron, Lake Michigan","volume":"42","issue":"6","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59cb6731e4b017cf3141c690","contributors":{"authors":[{"text":"Johnson, Nicholas S. njohnson@usgs.gov","contributorId":145440,"corporation":false,"usgs":true,"family":"Johnson","given":"Nicholas","email":"njohnson@usgs.gov","middleInitial":"S.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":false,"id":711228,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Brenden, Travis O.","contributorId":126759,"corporation":false,"usgs":false,"family":"Brenden","given":"Travis","email":"","middleInitial":"O.","affiliations":[{"id":6596,"text":"Quantitative Fisheries Center, Department of Fisheries and Wildlife Michigan State University","active":true,"usgs":false}],"preferred":false,"id":711229,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Swink, William D.","contributorId":126758,"corporation":false,"usgs":false,"family":"Swink","given":"William","email":"","middleInitial":"D.","affiliations":[{"id":6595,"text":"Retired USGS Fishery Biologist","active":true,"usgs":false}],"preferred":false,"id":711230,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lipps, Mathew A.","contributorId":196713,"corporation":false,"usgs":false,"family":"Lipps","given":"Mathew","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":711231,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70191263,"text":"70191263 - 2016 - Trace elements at the intersection of marine biological and geochemical evolution","interactions":[],"lastModifiedDate":"2017-10-02T13:21:19","indexId":"70191263","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1431,"text":"Earth-Science Reviews","active":true,"publicationSubtype":{"id":10}},"title":"Trace elements at the intersection of marine biological and geochemical evolution","docAbstract":"<p><span>Life requires a wide variety of bioessential trace elements to act as structural components and reactive centers in metalloenzymes. These requirements differ between organisms and have evolved over geological time, likely guided in some part by environmental conditions. Until recently, most of what was understood regarding trace element concentrations in the Precambrian oceans was inferred by extrapolation, geochemical modeling, and/or genomic studies. However, in the past decade, the increasing availability of trace element and isotopic data for sedimentary rocks of all ages has yielded new, and potentially more direct, insights into secular changes in seawater composition – and ultimately the evolution of the marine biosphere. Compiled records of many bioessential trace elements (including Ni, Mo, P, Zn, Co, Cr, Se, and I) provide new insight into how trace element abundance in Earth's ancient oceans may have been linked to biological evolution. Several of these trace elements display redox-sensitive behavior, while others are redox-sensitive but not bioessential (e.g., Cr, U). Their temporal trends in sedimentary archives provide useful constraints on changes in atmosphere-ocean redox conditions that are linked to biological evolution, for example, the activity of oxygen-producing, photosynthetic cyanobacteria. In this review, we summarize available Precambrian trace element proxy data, and discuss how temporal trends in the seawater concentrations of specific trace elements may be linked to the evolution of both simple and complex life. We also examine several biologically relevant and/or redox-sensitive trace elements that have yet to be fully examined in the sedimentary rock record (e.g., Cu, Cd, W) and suggest several directions for future studies.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.earscirev.2016.10.013","usgsCitation":"Robbins, L.J., Lalonde, S.V., Planavsky, N.J., Partin, C.A., Reinhard, C.T., Kendall, B., Scott, C., Hardisty, D.S., Gill, B.C., Alessi, D.S., Dupont, C.L., Saito, M.A., Crowe, S.A., Poulton, S.W., Bekker, A., Lyons, T.W., and Konhauser, K.O., 2016, Trace elements at the intersection of marine biological and geochemical evolution: Earth-Science Reviews, v. 163, p. 323-348, https://doi.org/10.1016/j.earscirev.2016.10.013.","productDescription":"26 p.","startPage":"323","endPage":"348","ipdsId":"IP-079724","costCenters":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":470348,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"http://hdl.handle.net/10012/13782","text":"External Repository"},{"id":346313,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"163","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59d35027e4b05fe04cc34d59","contributors":{"authors":[{"text":"Robbins, Leslie J.","contributorId":196838,"corporation":false,"usgs":false,"family":"Robbins","given":"Leslie","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":711744,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lalonde, Stefan V.","contributorId":196839,"corporation":false,"usgs":false,"family":"Lalonde","given":"Stefan","email":"","middleInitial":"V.","affiliations":[],"preferred":false,"id":711745,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Planavsky, Noah J.","contributorId":196840,"corporation":false,"usgs":false,"family":"Planavsky","given":"Noah","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":711746,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Partin, Camille A.","contributorId":196841,"corporation":false,"usgs":false,"family":"Partin","given":"Camille","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":711747,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Reinhard, Christopher T.","contributorId":196842,"corporation":false,"usgs":false,"family":"Reinhard","given":"Christopher","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":711748,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Kendall, Brian","contributorId":196843,"corporation":false,"usgs":false,"family":"Kendall","given":"Brian","email":"","affiliations":[],"preferred":false,"id":711749,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Scott, Clint 0000-0003-2778-2711 clintonscott@usgs.gov","orcid":"https://orcid.org/0000-0003-2778-2711","contributorId":5332,"corporation":false,"usgs":true,"family":"Scott","given":"Clint","email":"clintonscott@usgs.gov","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":711743,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Hardisty, Dalton S.","contributorId":196844,"corporation":false,"usgs":false,"family":"Hardisty","given":"Dalton","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":711750,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Gill, Benjamin C.","contributorId":196845,"corporation":false,"usgs":false,"family":"Gill","given":"Benjamin","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":711751,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Alessi, Daniel S.","contributorId":176793,"corporation":false,"usgs":false,"family":"Alessi","given":"Daniel","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":711752,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Dupont, Christopher L.","contributorId":196846,"corporation":false,"usgs":false,"family":"Dupont","given":"Christopher","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":711753,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Saito, Mak A.","contributorId":196847,"corporation":false,"usgs":false,"family":"Saito","given":"Mak","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":711754,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Crowe, Sean A.","contributorId":196853,"corporation":false,"usgs":false,"family":"Crowe","given":"Sean","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":711769,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Poulton, Simon W.","contributorId":196848,"corporation":false,"usgs":false,"family":"Poulton","given":"Simon","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":711755,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Bekker, Andrey","contributorId":196849,"corporation":false,"usgs":false,"family":"Bekker","given":"Andrey","email":"","affiliations":[],"preferred":false,"id":711756,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Lyons, Timothy W.","contributorId":196850,"corporation":false,"usgs":false,"family":"Lyons","given":"Timothy","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":711757,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Konhauser, Kurt O.","contributorId":196851,"corporation":false,"usgs":false,"family":"Konhauser","given":"Kurt","email":"","middleInitial":"O.","affiliations":[],"preferred":false,"id":711758,"contributorType":{"id":1,"text":"Authors"},"rank":17}]}}
,{"id":70189599,"text":"70189599 - 2016 - Complete genome sequence of a novel aquareovirus that infects the endangered fountain darter, Etheostoma fonticola","interactions":[],"lastModifiedDate":"2018-03-28T11:00:30","indexId":"70189599","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5099,"text":"Genome Announcements","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Complete genome sequence of a novel aquareovirus that infects the endangered fountain darter, <i>Etheostoma fonticola</i>","title":"Complete genome sequence of a novel aquareovirus that infects the endangered fountain darter, Etheostoma fonticola","docAbstract":"<p><span>Here, we report the complete genome of a novel aquareovirus isolated from clinically normal fountain darters,&nbsp;</span><i>Etheostoma fonticola</i><span>, inhabiting the San Marcos River, Texas, USA. The complete genome consists of 23,958 bp consisting of 11 segments that range from 783 bp (S11) to 3,866 bp (S1).</span></p>","language":"English","publisher":"American Society for Microbiology","doi":"10.1128/genomeA.01405-16","usgsCitation":"Iwanowicz, L., Iwanowicz, D.D., Adams, C.R., Lewis, T.D., Brandt, T.M., Cornman, R.S., and Sanders, L., 2016, Complete genome sequence of a novel aquareovirus that infects the endangered fountain darter, Etheostoma fonticola: Genome Announcements, v. 4, no. 6, Article e01405-16; 2 p., https://doi.org/10.1128/genomeA.01405-16.","productDescription":"Article e01405-16; 2 p.","ipdsId":"IP-080546","costCenters":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"links":[{"id":470441,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1128/genomea.01405-16","text":"Publisher Index Page"},{"id":343989,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"4","issue":"6","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"596f1e26e4b0d1f9f0640767","contributors":{"authors":[{"text":"Iwanowicz, Luke R.  0000-0002-1197-6178 liwanowicz@usgs.gov","orcid":"https://orcid.org/0000-0002-1197-6178","contributorId":150383,"corporation":false,"usgs":true,"family":"Iwanowicz","given":"Luke R. ","email":"liwanowicz@usgs.gov","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":705352,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Iwanowicz, Deborah D. 0000-0002-9613-8594 diwanowicz@usgs.gov","orcid":"https://orcid.org/0000-0002-9613-8594","contributorId":2253,"corporation":false,"usgs":true,"family":"Iwanowicz","given":"Deborah","email":"diwanowicz@usgs.gov","middleInitial":"D.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":705353,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Adams, Cynthia R. 0000-0003-4383-530X cradams@usgs.gov","orcid":"https://orcid.org/0000-0003-4383-530X","contributorId":176965,"corporation":false,"usgs":true,"family":"Adams","given":"Cynthia","email":"cradams@usgs.gov","middleInitial":"R.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":705354,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lewis, Teresa D.","contributorId":38407,"corporation":false,"usgs":true,"family":"Lewis","given":"Teresa","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":705355,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Brandt, Thomas M.","contributorId":194785,"corporation":false,"usgs":false,"family":"Brandt","given":"Thomas","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":705356,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Cornman, Robert S. 0000-0001-9511-2192 rcornman@usgs.gov","orcid":"https://orcid.org/0000-0001-9511-2192","contributorId":5356,"corporation":false,"usgs":true,"family":"Cornman","given":"Robert","email":"rcornman@usgs.gov","middleInitial":"S.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true},{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":705357,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Sanders, Lakyn R. lsanders@usgs.gov","contributorId":5714,"corporation":false,"usgs":true,"family":"Sanders","given":"Lakyn R.","email":"lsanders@usgs.gov","affiliations":[],"preferred":true,"id":705358,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70187358,"text":"70187358 - 2016 - Survival and habitat use of fledgling Golden-winged Warblers in the western Great Lakes region","interactions":[],"lastModifiedDate":"2020-08-20T20:24:13.059365","indexId":"70187358","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"seriesTitle":{"id":5103,"text":"Studies in Avian Biology","printIssn":"0197-9922","active":true,"publicationSubtype":{"id":24}},"chapter":"8","title":"Survival and habitat use of fledgling Golden-winged Warblers in the western Great Lakes region","docAbstract":"<p>Postfledging habitat use and fledgling survival remain unstudied for most songbirds, but this&nbsp; period is critical for understanding breeding habitat associations and full-season productivity. We used radiotelemetry to study movements, cover-type selection, and survival of fledgling Golden-winged Warblers (<i>Vermivora chrysoptera</i>) during the dependent postfledging period in managed forest landscapes of the western Great Lakes region. We used logistic exposure models to determine the relative importance of various habitat characteristics for explaining fledgling survival. In addition, we used compositional analysis, corrected for age-specific fledgling movement capabilities, to test for resource selection, as use versus availability, among cover types. We estimated that 48% of fledglings were depredated before independence from adult care at 25&nbsp;days after fledging. Fledgling survival was lowest immediately after fledging, and 86% of predation occurred in the first 8&nbsp; days following fledging. Distance from the nest to forest-shrubland edge was the strongest predictor of young fledgling survival, as survival decreased with nest distance into shrubland cover types and increased with nest distance into forest cover types. Fledglings from nests in shrubland cover types moved toward the nearest forest-shrubland edge, whereas fledglings from nests in forest cover types did not move toward edge. Fledglings selected mature forest and sapling-dominated clear-cuts over all other cover types during the early postfledging period, and fledgling survival in mature forest and sapling-dominated clearcuts was greater than in shrub-dominated clearcuts or wetland shrublands. Fledglings that were 9–25&nbsp;days postfledging experienced high survival (daily survival &gt;0.99) that was independent of any habitat variables we measured, and birds selected mature forest and shrub-dominated clear-cuts over all other cover types during that period. We conclude that sapling-dominated clear-cuts or mature forest with dense understory and shrub layers, cover types traditionally not associated with breeding, are important for fledgling survival, and therefore full-seasonal productivity in Golden-winged Warblers</p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Golden-winged Warbler ecology, conservation, and habitat management (Studies in Avian Biology, volume 49)","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"CRC Press","publisherLocation":"Boca Raton, FL","isbn":"978-1-4822-4068-9","usgsCitation":"Streby, H.M., Peterson, S.M., and Andersen, D., 2016, Survival and habitat use of fledgling Golden-winged Warblers in the western Great Lakes region, chap. 8 <i>of</i> Golden-winged Warbler ecology, conservation, and habitat management (Studies in Avian Biology, volume 49): Studies in Avian Biology, v. 49, p. 127-140.","productDescription":"14 p.","startPage":"127","endPage":"140","ipdsId":"IP-051235","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":340679,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":340678,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://hdl.handle.net/11299/189700"}],"volume":"49","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59084926e4b0fc4e448ffd4c","contributors":{"authors":[{"text":"Streby, Henry M.","contributorId":11024,"corporation":false,"usgs":false,"family":"Streby","given":"Henry","email":"","middleInitial":"M.","affiliations":[{"id":12455,"text":"University of Toledo","active":true,"usgs":false}],"preferred":false,"id":693771,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Peterson, Sean M.","contributorId":9354,"corporation":false,"usgs":false,"family":"Peterson","given":"Sean","email":"","middleInitial":"M.","affiliations":[{"id":34539,"text":"Minnesota Cooperative Fish and Wildlife Research Unit","active":true,"usgs":false},{"id":13013,"text":"Department of Environmental Science, Policy and Management, University of California, Berkeley","active":true,"usgs":false}],"preferred":false,"id":693772,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Andersen, David E. 0000-0001-9535-3404 dea@usgs.gov","orcid":"https://orcid.org/0000-0001-9535-3404","contributorId":2168,"corporation":false,"usgs":true,"family":"Andersen","given":"David E.","email":"dea@usgs.gov","affiliations":[{"id":34539,"text":"Minnesota Cooperative Fish and Wildlife Research Unit","active":true,"usgs":false},{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":693607,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
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