Ulaanbaatar, the capital city of Mongolia (fig. 1), is dependent on groundwater for its municipal and industrial water supply. The population of Mongolia is about 3 million people, with about one-half the population residing in or near Ulaanbaatar (World Population Review, 2016). Groundwater is drawn from a network of shallow wells in an alluvial aquifer along the Tuul River. Evidence indicates that current water use may not be sustainable from existing water sources, especially when factoring the projected water demand from a rapidly growing urban population (Ministry of Environment and Green Development, 2013). In response, the Government of Mongolia Ministry of Environment, Green Development, and Tourism (MEGDT) and the Freshwater Institute, Mongolia, requested technical assistance on groundwater modeling through the U.S. Army Corps of Engineers (USACE) to the U.S. Geological Survey (USGS). Scientists from the USGS and USACE provided two workshops in 2015 to Mongolian hydrology experts on basic principles of groundwater modeling using the USGS groundwater modeling program MODFLOW-2005 (Harbaugh, 2005). The purpose of the workshops was to bring together representatives from the Government of Mongolia, local universities, technical experts, and other key stakeholders to build in-country capacity in hydrogeology and groundwater modeling.
A preliminary steady-state groundwater-flow model was developed as part of the workshops to demonstrate groundwater modeling techniques to simulate groundwater conditions in alluvial deposits along the Tuul River in the vicinity of Ulaanbaatar. ModelMuse (Winston, 2009) was used as the graphical user interface for MODFLOW for training purposes during the workshops. Basic and advanced groundwater modeling concepts included in the workshops were groundwater principles; estimating hydraulic properties; developing model grids, data sets, and MODFLOW input files; and viewing and evaluating MODFLOW output files. A key to success was developing in-country technical capacity and partnerships with the Mongolian University of Science and Technology; Freshwater Institute, Mongolia, a non-profit organization; United Nations Educational, Scientific and Cultural Organization (UNESCO); the Government of Mongolia; and the USACE.
","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20161096","collaboration":"Prepared in cooperation with U.S. Army Corps of Engineers; U.S. Pacific Command; United Nations Educational, Scientific and Cultural Organization (UNESCO) and International Center for Integrated Water Resources Management under the auspices of UNESCO; Government of Mongolia Ministry of Environment, Green Development, and Tourism; and Freshwater Institute, Mongolia","usgsCitation":"Valder, J.F., Carter, J.M., Anderson, M.T., Davis, K.W., Haynes M.A., and Dechinlhundev, Dorjsuren, 2016, Building groundwater modeling capacity in Mongolia: U.S. Geological Survey Open-File Report 2016–1096, 1 sheet, https://dx.doi.org/10.3133/ofr20161096.","productDescription":"Sheet: 60.00 x 36.00 inches","numberOfPages":"1","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-075136","costCenters":[{"id":562,"text":"South Dakota Water Science Center","active":true,"usgs":true},{"id":34685,"text":"Dakota Water Science Center","active":true,"usgs":true}],"links":[{"id":323764,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2016/1096/ofr20161096.pdf","text":"Report","size":"8.91 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2016–1096"},{"id":323763,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2016/1096/coverthb.jpg"}],"country":"Mongolia","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[87.75126,49.2972],[88.80557,49.47052],[90.71367,50.33181],[92.23471,50.80217],[93.10422,50.49529],[94.14757,50.48054],[94.81595,50.01343],[95.81403,49.97747],[97.25973,49.72606],[98.23176,50.4224],[97.82574,51.011],[98.86149,52.04737],[99.98173,51.63401],[100.88948,51.51686],[102.06522,51.25992],[102.25591,50.51056],[103.67655,50.08997],[104.62155,50.27533],[105.88659,50.40602],[106.8888,50.2743],[107.86818,49.79371],[108.47517,49.28255],[109.40245,49.29296],[110.66201,49.13013],[111.58123,49.37797],[112.89774,49.54357],[114.36246,50.2483],[114.96211,50.14025],[115.4857,49.80518],[116.6788,49.88853],[116.1918,49.1346],[115.48528,48.13538],[115.74284,47.72654],[116.30895,47.85341],[117.29551,47.69771],[118.06414,48.06673],[118.86657,47.74706],[119.77282,47.04806],[119.66327,46.69268],[118.87433,46.80541],[117.4217,46.67273],[116.71787,46.3882],[115.9851,45.72724],[114.46033,45.33982],[113.46391,44.80889],[112.43606,45.01165],[111.87331,45.10208],[111.34838,44.45744],[111.66774,44.07318],[111.82959,43.74312],[111.12968,43.40683],[110.4121,42.87123],[109.2436,42.51945],[107.74477,42.48152],[106.12932,42.13433],[104.96499,41.59741],[104.52228,41.90835],[103.31228,41.90747],[101.83304,42.51487],[100.84587,42.6638],[99.51582,42.52469],[97.45176,42.74889],[96.3494,42.72564],[95.76245,43.31945],[95.30688,44.24133],[94.68893,44.35233],[93.48073,44.97547],[92.13389,45.11508],[90.94554,45.28607],[90.58577,45.71972],[90.97081,46.88815],[90.28083,47.69355],[88.8543,48.06908],[88.01383,48.59946],[87.75126,49.2972]]]},\"properties\":{\"name\":\"Mongolia\"}}]}","contact":"Director, South Dakota Water Science Center
U.S. Geological Survey
1608 Mountain View Road
Rapid City, South Dakota 57702
Or visit the South Dakota Water Science Center Web site at:
http://sd.water.usgs.gov/
The Defense Minerals Administration (DMA), Defense Minerals Exploration Administration (DMEA), and Office of Minerals Exploration (OME) mineral exploration programs were active over the period 1950–1974. Under these programs, the Federal Government contributed financial assistance in the exploration for certain strategic and critical minerals. The information about a mining property that was collected under these programs was placed in files called dockets. A docket is a collection of material (application, contract, correspondence, maps, reports, results) about a property for which an individual applied for exploration assistance from the Federal Government. Information found in dockets describe where mineral deposits were examined, what was found, and whether it was mined. As such, they provide very useful information to private industry regarding potential and non-potential prospect areas, provide the U.S. Geological Survey with useful information on mineral occurrences that are used in national assessments for particular mineral deposits, and provide other U.S. Federal agencies (Bureau of Indian Affairs, Bureau of Land Management, and Environmental Protection Agency) information relevant to land management, permitting, and leasing.
","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ds1004","usgsCitation":"Frank, D.G., 2016, Historical files from Federal Government mineral exploration-assistance programs, 1950 to 1974: U.S. Geological Survey Data Series 1004, https://dx.doi.org/10.3133/ds1004.","productDescription":"HTML Document","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-066436","costCenters":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"links":[{"id":323445,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/ds/1004/index.htm","linkFileType":{"id":5,"text":"html"},"description":"DS 2016-1004"},{"id":323466,"rank":2,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/ds/1004/coverthb.jpg"}],"country":"United 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States\"}}]}","contact":"Contact Information, Geology, Minerals, Energy, & Geophysics Science Center—Spokane
U.S. Geological Survey
904 W. Riverside Ave., Room 202
Spokane, WA 99201
FAX 509/368-3199
http://geomaps.wr.usgs.gov/gmeg/
Urban stormwater runoff is a critical source of degradation to stream ecosystems globally. Despite broad appreciation by stream ecologists of negative effects of stormwater runoff, stormwater management objectives still typically center on flood and pollution mitigation without an explicit focus on altered hydrology. Resulting management approaches are unlikely to protect the ecological structure and function of streams adequately. We present critical elements of stormwater management necessary for protecting stream ecosystems through 5 principles intended to be broadly applicable to all urban landscapes that drain to a receiving stream: 1) the ecosystems to be protected and a target ecological state should be explicitly identified; 2) the postdevelopment balance of evapotranspiration, stream flow, and infiltration should mimic the predevelopment balance, which typically requires keeping significant runoff volume from reaching the stream; 3) stormwater control measures (SCMs) should deliver flow regimes that mimic the predevelopment regime in quality and quantity; 4) SCMs should have capacity to store rain events for all storms that would not have produced widespread surface runoff in a predevelopment state, thereby avoiding increased frequency of disturbance to biota; and 5) SCMs should be applied to all impervious surfaces in the catchment of the target stream. These principles present a range of technical and social challenges. Existing infrastructural, institutional, or governance contexts often prevent application of the principles to the degree necessary to achieve effective protection or restoration, but significant potential exists for multiple co-benefits from SCM technologies (e.g., water supply and climate-change adaptation) that may remove barriers to implementation. Our set of ideal principles for stream protection is intended as a guide for innovators who seek to develop new approaches to stormwater management rather than accept seemingly insurmountable historical constraints, which guarantee future, ongoing degradation.
","language":"English","publisher":"University of Chicago Press","doi":"10.1086/685284","usgsCitation":"Walsh, C.J., Booth, D.B., Burns, M.J., Fletcher, T.D., Hale, R., Hoang, L.N., Livingston, G., Rippy, M.A., Roy, A.H., Scoggins, M., and Wallace, A., 2016, Principles for urban stormwater management to protect stream ecosystems: Freshwater Science, v. 35, no. 1, p. 398-411, https://doi.org/10.1086/685284.","productDescription":"14 p.","startPage":"398","endPage":"411","ipdsId":"IP-064098","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":488710,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1086/685284","text":"Publisher Index Page"},{"id":344966,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"35","issue":"1","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5997fc9ce4b0b589267cd210","contributors":{"authors":[{"text":"Walsh, Christopher J.","contributorId":171683,"corporation":false,"usgs":false,"family":"Walsh","given":"Christopher","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":708056,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Booth, Derek B.","contributorId":100873,"corporation":false,"usgs":false,"family":"Booth","given":"Derek","email":"","middleInitial":"B.","affiliations":[{"id":6934,"text":"University of Washington","active":true,"usgs":false}],"preferred":false,"id":708057,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Burns, Matthew J.","contributorId":146251,"corporation":false,"usgs":false,"family":"Burns","given":"Matthew","email":"","middleInitial":"J.","affiliations":[{"id":16645,"text":"Waterway Ecosystem Research Group, School of Ecosystem and Forest Sciences, The","active":true,"usgs":false}],"preferred":false,"id":708058,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Fletcher, Tim D.","contributorId":195752,"corporation":false,"usgs":false,"family":"Fletcher","given":"Tim","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":708059,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hale, Rebecca 0000-0002-3552-3691","orcid":"https://orcid.org/0000-0002-3552-3691","contributorId":195753,"corporation":false,"usgs":false,"family":"Hale","given":"Rebecca","email":"","affiliations":[{"id":12865,"text":"Smithsonian Institute","active":true,"usgs":false}],"preferred":false,"id":708060,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hoang, Lan N.","contributorId":195754,"corporation":false,"usgs":false,"family":"Hoang","given":"Lan","email":"","middleInitial":"N.","affiliations":[],"preferred":false,"id":708061,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Livingston, Grant","contributorId":195755,"corporation":false,"usgs":false,"family":"Livingston","given":"Grant","email":"","affiliations":[],"preferred":false,"id":708062,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Rippy, Megan A.","contributorId":195756,"corporation":false,"usgs":false,"family":"Rippy","given":"Megan","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":708063,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Roy, Allison H. 0000-0002-8080-2729 aroy@usgs.gov","orcid":"https://orcid.org/0000-0002-8080-2729","contributorId":4240,"corporation":false,"usgs":true,"family":"Roy","given":"Allison","email":"aroy@usgs.gov","middleInitial":"H.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":708041,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Scoggins, Mateo","contributorId":29908,"corporation":false,"usgs":true,"family":"Scoggins","given":"Mateo","email":"","affiliations":[],"preferred":false,"id":708064,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Wallace, Angela","contributorId":195757,"corporation":false,"usgs":false,"family":"Wallace","given":"Angela","email":"","affiliations":[],"preferred":false,"id":708065,"contributorType":{"id":1,"text":"Authors"},"rank":11}]}} ,{"id":70171651,"text":"ofr20161092 - 2016 - Preliminary peak stage and streamflow data at selected U.S. Geological Survey streamgages for flooding in the central and southeastern United States during December 2015 and January 2016","interactions":[],"lastModifiedDate":"2016-06-20T15:29:51","indexId":"ofr20161092","displayToPublicDate":"2016-06-16T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-1092","title":"Preliminary peak stage and streamflow data at selected U.S. Geological Survey streamgages for flooding in the central and southeastern United States during December 2015 and January 2016","docAbstract":"Flooding occurred in the central and southeastern United States during December 2015 and January 2016. The flooding was the result of more than 20 inches of rain falling in a 19 day period from December 12 to December 31, 2015. U.S. Geological Survey streamgages recorded 23 peaks of record during the subsequent flooding, with a total of 172 streamgages recording peaks that ranked in the top 5 all time for the period of record.
","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20161092","usgsCitation":"Holmes, R.R., Jr., Watson, K.M., and Harris, T.E., 2016, Preliminary peak stage and streamflow data at selected U.S. Geological Survey streamgages for flooding in the central and southeastern United States during December 2015 and January 2016: U.S. Geological Survey Open-File Report 2016–1092, 27 p., https://dx.doi.org/10.3133/ofr20161092.","productDescription":"iv, 28 p.","startPage":"1","endPage":"28","numberOfPages":"36","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-074393","costCenters":[{"id":502,"text":"Office of Surface Water","active":true,"usgs":true}],"links":[{"id":323762,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2016/1092/ofr20161092.pdf","text":"Report","size":"38.2 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 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States\"}}]}","contact":"Chief, Office of Surface Water
U.S. Geological Survey
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Or visit the Office of Surface Water Web site at:
http://water.usgs.gov/osw/
Invasive species introductions in Arctic and Subarctic ecosystems are growing as climate change manifests and human activity increases in high latitudes. The aquatic plants of the genus Elodea are potential invaders to Arctic and Subarctic ecosystems circumpolar and at least one species is already established in Alaska, USA. To illustrate the problems of preventing, eradicating, containing, and mitigating aquatic, invasive plants in Arctic and Subarctic ecosystems, we review the invasion dynamics of Elodea and provide recommendations for research and management efforts in Alaska. Foremost, we conclude the remoteness of Arctic and Subarctic systems such as Alaska is no longer a protective attribute against invasions, as transportation pathways now reach throughout these regions. Rather, high costs of operating in remote Arctic and Subarctic systems hinders detection of infestations and limits eradication or mitigation, emphasizing management priorities of prevention and containment of aquatic plant invaders in Alaska and other Arctic and Subarctic systems.
","language":"English","publisher":"Springer","doi":"10.1007/s10750-016-2767-x","usgsCitation":"Carey, M.P., Sethi, S.A., Larsen, S.J., and Rich, C.F., 2016, A primer on potential impacts, management priorities, and future directions for Elodea spp. in high latitude systems: learning from the Alaskan experience: Hydrobiologia, v. 777, no. 1, p. 1-19, https://doi.org/10.1007/s10750-016-2767-x.","productDescription":"19 p.","startPage":"1","endPage":"19","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-063244","costCenters":[{"id":118,"text":"Alaska Science Center Geography","active":true,"usgs":true}],"links":[{"id":323718,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"777","issue":"1","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-04-26","publicationStatus":"PW","scienceBaseUri":"57626e1ce4b07657d199cd5c","contributors":{"authors":[{"text":"Carey, Michael P. 0000-0002-3327-8995 mcarey@usgs.gov","orcid":"https://orcid.org/0000-0002-3327-8995","contributorId":5397,"corporation":false,"usgs":true,"family":"Carey","given":"Michael","email":"mcarey@usgs.gov","middleInitial":"P.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true},{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":120,"text":"Alaska Science Center Water","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":638837,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sethi, Suresh A","contributorId":171843,"corporation":false,"usgs":false,"family":"Sethi","given":"Suresh","email":"","middleInitial":"A","affiliations":[{"id":26952,"text":"U.S. Fish and Wildlife Service, Anchorage, AK; Fisheries, Aquatic Science and Technology Lab, Alaska Pacific University, Anchorage, AK and U.S. Geological Survey New York Cooperative Fish and Wildlife Research Unit, Cornell University, Ithaca, NY","active":true,"usgs":false}],"preferred":false,"id":638838,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Larsen, Sabrina J","contributorId":171844,"corporation":false,"usgs":false,"family":"Larsen","given":"Sabrina","email":"","middleInitial":"J","affiliations":[{"id":26953,"text":"Fisheries, Aquatic Science and Technology Lab, Alaska Pacific University, Anchorage, AK and U.S. Forest Service, Santa Fe National Forest, Santa Fe, NM","active":true,"usgs":false}],"preferred":false,"id":638839,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Rich, Cecil F","contributorId":171845,"corporation":false,"usgs":false,"family":"Rich","given":"Cecil","email":"","middleInitial":"F","affiliations":[{"id":26954,"text":"Fisheries and Ecological Services Division, U.S. Fish and Wildlife Service, Anchorage, AK and U.S. Forest Service, Santa Fe National Forest, Santa Fe, NM","active":true,"usgs":false}],"preferred":false,"id":638840,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70171034,"text":"ds1000 - 2016 - Benthos and plankton community data for selected rivers and harbors along the western Lake Michigan shoreline, 2014","interactions":[],"lastModifiedDate":"2016-06-23T16:22:02","indexId":"ds1000","displayToPublicDate":"2016-06-15T16:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":310,"text":"Data Series","code":"DS","onlineIssn":"2327-638X","printIssn":"2327-0271","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"1000","title":"Benthos and plankton community data for selected rivers and harbors along the western Lake Michigan shoreline, 2014","docAbstract":"Benthos (benthic invertebrates) and plankton (zooplankton and phytoplankton) communities were sampled in 2014 at 10 Wisconsin rivers and harbors, including 4 sites in Great Lakes Areas of Concern and 6 less degraded comparison sites with similar physical and chemical characteristics, including climate, latitude, geology, and land use. Previous U.S. Geological Survey sampling was completed in 2012, but because of ongoing sediment remediation at three of the Areas of Concern (AOCs) and unusually hot and dry conditions in many areas during 2012, additional sampling was added in 2014. Comparable sampling methods were used in 2012 and 2014. Benthos were collected by using Hester-Dendy artificial substrate samplers and composite Ponar grab samples of bottom sediment; zooplankton were collected by using tows from depth to the surface with a 63-micrometer mesh plankton net; phytoplankton were collected by using whole water samples composited from set depth intervals. This report describes the study areas and field sampling methods for 2014, and it presents data on taxonomic identification and abundance of benthos and plankton that can serve as a basis for evaluation of related Beneficial Use Impairments (BUIs) at the AOCs. Physical and chemical data were sampled concurrently (specific conductance, temperature, pH, dissolved oxygen, chlorophyll a, total and volatile suspended solids in water samples; particle size and volatile-on-ignition of sediment in benthic grab samples). The results of field quality assurance-quality control are also presented.
","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ds1000","collaboration":"Prepared in cooperation with the Wisconsin Department of Natural Resources and the U.S. Environmental Protection Agency-Great Lakes National Program Office","usgsCitation":"Scudder Eikenberry, B.C., Burns, D.J., Templar, H.A., Bell, A.H., and Mapel, K.T., 2016, Benthos and plankton community data for selected rivers and harbors along the western Lake Michigan shoreline, 2014: U.S. Geological Survey Data Series 1000, 29 p. plus 8 appendixes, https://dx.doi.org/10.3133/ds1000.","productDescription":"Report: viii, 29 p.; 8 Appendixes; Metadata","numberOfPages":"42","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-072354","costCenters":[{"id":677,"text":"Wisconsin Water Science 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U.S. Geological Survey
8505 Research Way
Middleton, WI 53562-3586
http://wi.water.usgs.gov/
Establishment of nonnative Northern Pike Esox lucius in Pactola Reservoir, South Dakota, has prompted concern among biologists about the influence of this species on the lake’s intensively managed salmonid fisheries. Ancedotal information suggests that catch rates of Rainbow Trout Oncorhynchus mykiss have declined while mean size and abundance of Northern Pike has increased, although quantitative information on diet and growth of the Northern Pike population is lacking. To address potential interactions between Northern Pike and Rainbow Trout, we assessed size-dependent predation by Northern Pike on Rainbow Trout and determined the relative energetic contribution of stocked Rainbow Trout to Northern Pike growth using bioenergetics modeling. Stable isotopes combined with traditional diet analyses revealed that smaller Northern Pike (<600 mm TL) consumed primarily centrarchids and Rainbow Smelt Osmerus mordax, and Rainbow Trout contributed less than 10% to their annual energy consumption. In contrast, larger Northern Pike (≥600 mm TL) consumed primarily Rainbow Trout, which accounted for 56% of their annual energy consumption. Combining estimates of Northern Pike predation with production costs of catchable-size Rainbow Trout revealed that annual economic losses ranged from US$15,259 to $24,801 per year. Over its lifespan, an age-10 Northern Pike was estimated to consume ~117 Rainbow Trout worth approximately $340. Thus, Northern Pike predation substantially influences salmonid management initiatives and is likely a primary factor contributing to reduced Rainbow Trout abundance and return to anglers in Pactola Reservoir. Strategies for reducing Northern Pike predation on Rainbow Trout include increasing the size of stocked fish or altering the timing and spatial distribution of stocking events.
","language":"English","publisher":"American Fisheries Society","doi":"10.1080/02755947.2015.1116472","usgsCitation":"Scheibel, N.C., Dembkowski, D., Davis, J.L., and Chipps, S.R., 2016, Impacts of Northern Pike on stocked Rainbow Trout in Pactola Reservoir, South Dakota: North American Journal of Fisheries Management, v. 36, no. 2, p. 230-240, https://doi.org/10.1080/02755947.2015.1116472.","productDescription":"11 p.","startPage":"230","endPage":"240","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-064502","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":323714,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"South Dakota","otherGeospatial":"Pactola Reservoir","volume":"36","issue":"2","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2016-03-08","publicationStatus":"PW","scienceBaseUri":"57626e20e4b07657d199cd92","contributors":{"authors":[{"text":"Scheibel, Natalie C.","contributorId":171928,"corporation":false,"usgs":false,"family":"Scheibel","given":"Natalie","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":639132,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dembkowski, Daniel J.","contributorId":78237,"corporation":false,"usgs":true,"family":"Dembkowski","given":"Daniel J.","affiliations":[],"preferred":false,"id":639133,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Davis, Jacob L.","contributorId":171929,"corporation":false,"usgs":false,"family":"Davis","given":"Jacob","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":639134,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Chipps, Steven R. 0000-0001-6511-7582 steve_chipps@usgs.gov","orcid":"https://orcid.org/0000-0001-6511-7582","contributorId":2243,"corporation":false,"usgs":true,"family":"Chipps","given":"Steven","email":"steve_chipps@usgs.gov","middleInitial":"R.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":638863,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70139712,"text":"70139712 - 2016 - Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts","interactions":[],"lastModifiedDate":"2016-06-15T15:56:40","indexId":"70139712","displayToPublicDate":"2016-06-15T16:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1471,"text":"Ecology of Freshwater Fish","active":true,"publicationSubtype":{"id":10}},"title":"Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts","docAbstract":"Coastal Brook Trout (Salvelinus fontinalis) populations are found from northern Canada to New England. The extent of anadromy generally decreases with latitude, but the ecology and movements of more southern populations are poorly understood. We conducted a 33-month acoustic telemetry study of Brook Trout in Red Brook, MA, and adjacent Buttermilk Bay (marine system) using 16 fixed acoustic receivers and surgically implanting acoustic transmitters in 84 individuals. Tagged Brook Trout used the stream, estuary (50% of individuals) and bay (10% of individuals). Movements into full sea water were brief when occurring. GAMM models revealed that transitions between habitat areas occurred most often in spring and fall. Environmental data suggest that use of the saline environment is limited by summer temperatures in the bay. Movements may also be related to moon phase. Compared to more northern coastal populations of Brook Trout, the Red Brook population appears to be less anadromous overall, yet the estuarine segment of the system may have considerable ecological importance as a food resource.
","language":"English","publisher":"Wiley","doi":"10.1111/eff.12216","usgsCitation":"Snook, E., Letcher, B., Dubreuil, T.L., Zydlewski, J.D., O'Donnell, M., Whiteley, A.R., Hurley, S.T., and Danylchuk, A.J., 2016, Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts: Ecology of Freshwater Fish, v. 25, no. 3, p. 360-375, https://doi.org/10.1111/eff.12216.","productDescription":"16 p.","startPage":"360","endPage":"375","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-056464","costCenters":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"links":[{"id":488240,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.7275/4727460","text":"External Repository"},{"id":323720,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"25","issue":"3","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2015-03-06","publicationStatus":"PW","scienceBaseUri":"5524ffafe4b027f0aee3d47b","contributors":{"authors":[{"text":"Snook, Erin L.","contributorId":138978,"corporation":false,"usgs":false,"family":"Snook","given":"Erin L.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":539566,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Letcher, Benjamin H. 0000-0003-0191-5678 bletcher@usgs.gov","orcid":"https://orcid.org/0000-0003-0191-5678","contributorId":2864,"corporation":false,"usgs":true,"family":"Letcher","given":"Benjamin H.","email":"bletcher@usgs.gov","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":539565,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Dubreuil, Todd L. 0000-0003-0189-4336 tdubreuil@usgs.gov","orcid":"https://orcid.org/0000-0003-0189-4336","contributorId":5552,"corporation":false,"usgs":true,"family":"Dubreuil","given":"Todd","email":"tdubreuil@usgs.gov","middleInitial":"L.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":539567,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Zydlewski, Joseph D. 0000-0002-2255-2303 jzydlewski@usgs.gov","orcid":"https://orcid.org/0000-0002-2255-2303","contributorId":2004,"corporation":false,"usgs":true,"family":"Zydlewski","given":"Joseph","email":"jzydlewski@usgs.gov","middleInitial":"D.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true},{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":539568,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"O'Donnell, Matthew J. 0000-0002-9089-2377 mjodonnell@usgs.gov","orcid":"https://orcid.org/0000-0002-9089-2377","contributorId":138979,"corporation":false,"usgs":true,"family":"O'Donnell","given":"Matthew J.","email":"mjodonnell@usgs.gov","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":539569,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Whiteley, Andrew R.","contributorId":52072,"corporation":false,"usgs":false,"family":"Whiteley","given":"Andrew","email":"","middleInitial":"R.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":539570,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hurley, Stephen T.","contributorId":138980,"corporation":false,"usgs":false,"family":"Hurley","given":"Stephen","email":"","middleInitial":"T.","affiliations":[{"id":12605,"text":"Mass Fish and Wildlife","active":true,"usgs":false}],"preferred":false,"id":539571,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Danylchuk, Andy J.","contributorId":138981,"corporation":false,"usgs":false,"family":"Danylchuk","given":"Andy","email":"","middleInitial":"J.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":539572,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}} ,{"id":70173913,"text":"70173913 - 2016 - Head-started Kemp’s ridley turtle (Lepidochelys kempii) nest recorded in Florida: Possible implications","interactions":[],"lastModifiedDate":"2016-06-15T13:55:17","indexId":"70173913","displayToPublicDate":"2016-06-15T14:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1210,"text":"Chelonian Conservation and Biology","active":true,"publicationSubtype":{"id":10}},"title":"Head-started Kemp’s ridley turtle (Lepidochelys kempii) nest recorded in Florida: Possible implications","docAbstract":"A head-started Kemp’s ridley sea turtle (Lepidochelys kempii) was documented nesting on South Walton Beach, Florida on 25 May 2015. This record supports the possibility that exposure to Florida waters after being held in captivity through 1–3 yrs of age during the head-starting process may have influenced future nest site selection of this and perhaps other Kemp’s ridley turtles. Such findings could have important ramifications for marine water experimentation and release site selection for turtles that have been reared in captivity.
","language":"English","publisher":"Chelonian Research Foundation","doi":"10.2744/CCB-1192.1","usgsCitation":"Shaver, D.J., Lamont, M.M., Maxwell, S., Walker, J.S., and Dillingham, T., 2016, Head-started Kemp’s ridley turtle (Lepidochelys kempii) nest recorded in Florida: Possible implications: Chelonian Conservation and Biology, v. 15, no. 1, p. 138-143, https://doi.org/10.2744/CCB-1192.1.","productDescription":"6 p.","startPage":"138","endPage":"143","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-069636","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":470880,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.2744/ccb-1192.1","text":"Publisher Index Page"},{"id":323699,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Florida","city":"Panama City, South Walton Beach","volume":"15","issue":"1","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1fe4b07657d199cd78","contributors":{"authors":[{"text":"Shaver, Donna J.","contributorId":11104,"corporation":false,"usgs":true,"family":"Shaver","given":"Donna","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":639060,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lamont, Margaret M. 0000-0001-7520-6669 mlamont@usgs.gov","orcid":"https://orcid.org/0000-0001-7520-6669","contributorId":4525,"corporation":false,"usgs":true,"family":"Lamont","given":"Margaret","email":"mlamont@usgs.gov","middleInitial":"M.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":639059,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Maxwell, Sharon","contributorId":171904,"corporation":false,"usgs":false,"family":"Maxwell","given":"Sharon","email":"","affiliations":[{"id":26966,"text":"South Walton Turtle Watch Group","active":true,"usgs":false}],"preferred":false,"id":639061,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Walker, Jennifer Shelby","contributorId":171905,"corporation":false,"usgs":false,"family":"Walker","given":"Jennifer","email":"","middleInitial":"Shelby","affiliations":[{"id":5106,"text":"National Park Service, Yellowstone National Park, Mammoth, Wyoming 82190","active":true,"usgs":false}],"preferred":false,"id":639062,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dillingham, Ted","contributorId":171906,"corporation":false,"usgs":false,"family":"Dillingham","given":"Ted","email":"","affiliations":[{"id":590,"text":"U.S. Army Corps of Engineers","active":false,"usgs":false}],"preferred":false,"id":639063,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70173936,"text":"70173936 - 2016 - Historical baselines and the future of shell calcification for a foundation species in a changing ocean","interactions":[],"lastModifiedDate":"2016-06-17T13:28:49","indexId":"70173936","displayToPublicDate":"2016-06-15T14:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3173,"text":"Proceedings of the Royal Society B","active":true,"publicationSubtype":{"id":10}},"title":"Historical baselines and the future of shell calcification for a foundation species in a changing ocean","docAbstract":"Seawater pH and the availability of carbonate ions are decreasing due to anthropogenic carbon dioxide emissions, posing challenges for calcifying marine species. Marine mussels are of particular concern given their role as foundation species worldwide. Here, we document shell growth and calcification patterns in Mytilus californianus, the California mussel, over millennial and decadal scales. By comparing shell thickness across the largest modern shells, the largest mussels collected in the 1960s–1970s and shells from two Native American midden sites (∼1000–2420 years BP), we found that modern shells are thinner overall, thinner per age category and thinner per unit length. Thus, the largest individuals of this species are calcifying less now than in the past. Comparisons of shell thickness in smaller individuals over the past 10–40 years, however, do not show significant shell thinning. Given our sampling strategy, these results are unlikely to simply reflect within-site variability or preservation effects. Review of environmental and biotic drivers known to affect shell calcification suggests declining ocean pH as a likely explanation for the observed shell thinning. Further future decreases in shell thickness could have significant negative impacts on M. californianus survival and, in turn, negatively impact the species-rich complex that occupies mussel beds..
","language":"English","publisher":"The Royal Society","doi":"10.1098/rspb.2016.0392","usgsCitation":"Pfister, C.A., Roy, K., Wootton, T.J., McCoy, S.J., Paine, R.T., Suchanek, T., and Sanford, E., 2016, Historical baselines and the future of shell calcification for a foundation species in a changing ocean: Proceedings of the Royal Society B, v. 283, no. 1832, p. 1-8, https://doi.org/10.1098/rspb.2016.0392.","productDescription":"8 p.","startPage":"1","endPage":"8","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-075572","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":470881,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1098/rspb.2016.0392","text":"Publisher Index Page"},{"id":323897,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"283","issue":"1832","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-15","publicationStatus":"PW","scienceBaseUri":"57651f35e4b07657d19c78ab","contributors":{"authors":[{"text":"Pfister, Catherine A.","contributorId":172095,"corporation":false,"usgs":false,"family":"Pfister","given":"Catherine","email":"","middleInitial":"A.","affiliations":[{"id":26978,"text":"Dep't of Ecology & Evolution, University of Chicago","active":true,"usgs":false}],"preferred":false,"id":639585,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Roy, Kaustuv","contributorId":172096,"corporation":false,"usgs":false,"family":"Roy","given":"Kaustuv","email":"","affiliations":[{"id":26979,"text":"Section of Ecology, Behaviour & Evolution, U of C San Diego, CA","active":true,"usgs":false}],"preferred":false,"id":639586,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wootton, Timothy J.","contributorId":172097,"corporation":false,"usgs":false,"family":"Wootton","given":"Timothy","email":"","middleInitial":"J.","affiliations":[{"id":26980,"text":"Dep't of Ecology & Evolution, U of Chicago","active":true,"usgs":false}],"preferred":false,"id":639587,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"McCoy, Sophie J.","contributorId":172098,"corporation":false,"usgs":false,"family":"McCoy","given":"Sophie","email":"","middleInitial":"J.","affiliations":[{"id":26980,"text":"Dep't of Ecology & Evolution, U of Chicago","active":true,"usgs":false}],"preferred":false,"id":639588,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Paine, Robert T.","contributorId":172099,"corporation":false,"usgs":false,"family":"Paine","given":"Robert","email":"","middleInitial":"T.","affiliations":[{"id":26981,"text":"Dep't of Biology, U of Washington","active":true,"usgs":false}],"preferred":false,"id":639589,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Suchanek, Tom tsuchanek@usgs.gov","contributorId":152285,"corporation":false,"usgs":true,"family":"Suchanek","given":"Tom","email":"tsuchanek@usgs.gov","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":639584,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Sanford, Eric","contributorId":172100,"corporation":false,"usgs":false,"family":"Sanford","given":"Eric","email":"","affiliations":[{"id":26982,"text":"UC Davis, Bodega Marine Lab and Dept of Evolution and Ecology","active":true,"usgs":false}],"preferred":false,"id":639590,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70173888,"text":"70173888 - 2016 - Habitat use and growth of the western painted crayfish Orconectes palmeri longimanus","interactions":[],"lastModifiedDate":"2016-06-15T13:13:17","indexId":"70173888","displayToPublicDate":"2016-06-15T14:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2235,"text":"Journal of Crustacean Biology","active":true,"publicationSubtype":{"id":10}},"title":"Habitat use and growth of the western painted crayfish Orconectes palmeri longimanus","docAbstract":"Identifying ontogenetic shifts in habitat use by aquatic organisms is necessary for improving conservation strategies; however, our ability to designate life stages based on surrogate metrics (i.e., length) is questionable without validation. This study identified growth patterns of age-0 western painted crayfish Orconectes palmeri longimanus (Faxon, 1898) reared in the laboratory, provided support for field-based designations of age-0 lengths, and identified microhabitat factors important to adult and juvenile presence from field collections. Two growth periods of a laboratory crayfish population were described using a broken line model: a rapid, early-growth period (weeks 2-20, slope = 0.81 ± 0.03SE), and a slower, late-growth period (weeks 22-50, slope = 0.13 ± 0.03SE). A smoothed curve was generated to represent the size distribution of juveniles from our laboratory population to determine the probability that an age-0 crayfish from our laboratory population had a carapace length (CL) similar to that found in previous field studies using onset of maturity (22.4 mm CL). We determined that the probability of the age-0 crayfish in our summer laboratory population exceeding 22.4 mm CL was 0.06. The threshold between the lower 0.95 and upper 0.05 probabilities was 22.9 mm CL, confirming previous field observations of onset at maturity. We used this threshold to identify juveniles and adults from our field collections, and found that both life stages were positively associated with coarse substrate and negatively associated with water depth. Adults, however, were negatively related to gravel, whereas juveniles showed a positive relationship. This result is reflective of the relationship between crayfish body size and refuge use within the interstitial spaces of substrates, whereby adult crayfish are unable to seek refuge in the small interstitial spaces of gravel.
","language":"English","doi":"10.1163/1937240X-00002417","issn":"0278-0372","collaboration":"Oklahoma Cooperative Fish and Wildlife Research Unit","usgsCitation":"Dyer, J.J., Mouser, J., and Brewer, S.K., 2016, Habitat use and growth of the western painted crayfish Orconectes palmeri longimanus: Journal of Crustacean Biology, v. 36, no. 2, p. 172-179, https://doi.org/10.1163/1937240X-00002417.","productDescription":"8 p.","startPage":"172","endPage":"179","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-069448","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":470882,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1163/1937240x-00002417","text":"Publisher Index Page"},{"id":323688,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"36","issue":"2","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1ee4b07657d199cd71","contributors":{"authors":[{"text":"Dyer, Joseph J.","contributorId":140681,"corporation":false,"usgs":false,"family":"Dyer","given":"Joseph","email":"","middleInitial":"J.","affiliations":[{"id":7249,"text":"Oklahoma State University","active":true,"usgs":false}],"preferred":false,"id":639028,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mouser, Joshua","contributorId":171894,"corporation":false,"usgs":false,"family":"Mouser","given":"Joshua","affiliations":[],"preferred":false,"id":639029,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Brewer, Shannon K. 0000-0002-1537-3921 skbrewer@usgs.gov","orcid":"https://orcid.org/0000-0002-1537-3921","contributorId":2252,"corporation":false,"usgs":true,"family":"Brewer","given":"Shannon","email":"skbrewer@usgs.gov","middleInitial":"K.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":638892,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}} ,{"id":70173911,"text":"70173911 - 2016 - Physiology of the invasive apple snail Pomacea maculata: tolerance to low temperatures","interactions":[],"lastModifiedDate":"2016-09-27T10:15:35","indexId":"70173911","displayToPublicDate":"2016-06-15T13:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2455,"text":"Journal of Shellfish Research","active":true,"publicationSubtype":{"id":10}},"title":"Physiology of the invasive apple snail Pomacea maculata: tolerance to low temperatures","docAbstract":"Apple snails of the genus Pomacea native to South America have invaded and become established in Europe, Asia, and the United States. Both the channeled apple snail Pomacea canaliculata and the island apple snail Pomacea maculata have been reported in the United States. The two species are difficult to distinguish using morphological characters, leading to uncertainty about the identity of the animals from populations in the United States. Because the snails are subtropical, their tolerance of low temperatures is a critical factor in limiting the spread of the animals from present localities along the coast of the Gulf of Mexico to more northern areas. The tolerance of P. maculata collected in Louisiana to temperatures as low as 0°C was examined. There was no mortality among animals maintained in water at temperatures of 20°C or 15°C for 10 days. Survival of animals during a 10-day exposure to water at temperatures 10°C and 5°C was 50%. The LD50 for a 10-day exposure was 7°C. Snails did not survive more than 5 days in liquid water at 0°C. Ammonia excretion by animals in temperatures of 20°C and 15°C was comparable to values reported for freshwater gastropods; at very low temperatures, excretion of ammonia was decreased. There was no difference in the mean values of the osmolality of the hemolymph of animals exposed to 20°C, 15°C and 10°C for 10 days. Sequencing of mitochondrial cytochrome oxidase 1 identified the animals in the Louisiana population used in this study as P. maculata.
","language":"English","publisher":"National Shellfisheries Association","doi":"10.2983/035.035.0122","usgsCitation":"Deaton, L.E., Schmidt, W., Leblanc, B., Carter, J., Mueck, K., and Merino, S., 2016, Physiology of the invasive apple snail Pomacea maculata: tolerance to low temperatures: Journal of Shellfish Research, v. 35, no. 1, p. 207-210, https://doi.org/10.2983/035.035.0122.","productDescription":"4 p.","startPage":"207","endPage":"210","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-067604","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":323678,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Louisana","city":"Terrebone Parish","otherGeospatial":"Bayou Black","volume":"35","issue":"1","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e20e4b07657d199cd9a","contributors":{"authors":[{"text":"Deaton, Lewis E.","contributorId":171881,"corporation":false,"usgs":false,"family":"Deaton","given":"Lewis","email":"","middleInitial":"E.","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638994,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schmidt, William ","contributorId":171882,"corporation":false,"usgs":false,"family":"Schmidt","given":"William ","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638995,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Leblanc, Brody","contributorId":171883,"corporation":false,"usgs":false,"family":"Leblanc","given":"Brody","email":"","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638996,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Carter, Jacoby 0000-0003-0110-0284 carterj@usgs.gov","orcid":"https://orcid.org/0000-0003-0110-0284","contributorId":2399,"corporation":false,"usgs":true,"family":"Carter","given":"Jacoby","email":"carterj@usgs.gov","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":638993,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Mueck, Kristy","contributorId":171884,"corporation":false,"usgs":false,"family":"Mueck","given":"Kristy","email":"","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638997,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Merino, Sergio 0000-0002-2834-2243 merinos@usgs.gov","orcid":"https://orcid.org/0000-0002-2834-2243","contributorId":3653,"corporation":false,"usgs":true,"family":"Merino","given":"Sergio","email":"merinos@usgs.gov","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":638998,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}} ,{"id":70173896,"text":"70173896 - 2016 - Community metabolism in shallow coral reef and seagrass ecosystems, lower Florida Keys","interactions":[],"lastModifiedDate":"2016-06-15T10:44:57","indexId":"70173896","displayToPublicDate":"2016-06-15T11:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2663,"text":"Marine Ecology Progress Series","active":true,"publicationSubtype":{"id":10}},"title":"Community metabolism in shallow coral reef and seagrass ecosystems, lower Florida Keys","docAbstract":"Diurnal variation of net community production (NEP) and net community calcification (NEC) were measured in coral reef and seagrass biomes during October 2012 in the lower Florida Keys using a mesocosm enclosure and the oxygen gradient flux technique. Seagrass and coral reef sites showed diurnal variations of NEP and NEC, with positive values at near-seafloor light levels >100–300 µEinstein m-2 s-1. During daylight hours, we detected an average NEP of 12.3 and 8.6 mmol O2 m-2 h-1 at the seagrass and coral reef site, respectively. At night, NEP at the seagrass site was relatively constant, while on the coral reef, net respiration was highest immediately after dusk and decreased during the rest of the night. At the seagrass site, NEC values ranged from 0.20 g CaCO3 m-2 h-1 during daylight to -0.15 g CaCO3 m-2 h-1 at night, and from 0.17 to -0.10 g CaCO3 m-2 h-1 at the coral reef site. There were no significant differences in pH and aragonite saturation states (Ωar) between the seagrass and coral reef sites. Decrease in light levels during thunderstorms significantly decreased NEP, transforming the system from net autotrophic to net heterotrophic.
","language":"English","publisher":"Oldendorf/Luhe","publisherLocation":"Germany","doi":"10.3354/meps11385","collaboration":"USF; Cooperative Institute for Marine and Atmospheric Studies; Dalhousie University; NOAA; University of Trinidad and Tobago; National Commission for Knowledge and Use of Biodiversity, Mexico; UAV Collaborative; LDEO, Columbia University","usgsCitation":"Turk, D., Yates, K.K., Vega-Rodriguez, M., Toro-Farmer, G., L’Esperance, C., Melo, N., Ramsewak, D., Estrada, S.C., Muller-Karger, F.E., Herwitz, S.R., and McGillis, W., 2016, Community metabolism in shallow coral reef and seagrass ecosystems, lower Florida Keys: Marine Ecology Progress Series, v. 538, p. 35-52, https://doi.org/10.3354/meps11385.","productDescription":"18 p.","startPage":"35","endPage":"52","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-057353","costCenters":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":470884,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3354/meps11385","text":"Publisher Index Page"},{"id":323667,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":323666,"type":{"id":15,"text":"Index Page"},"url":"https://www.int-res.com/abstracts/meps/v538/p35-52/"}],"country":"United States","state":"Florida","otherGeospatial":"Florida Keys","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"type\": \"Polygon\",\n \"coordinates\": [\n [\n [\n -82.3919677734375,\n 24.761796517185815\n ],\n [\n -82.3260498046875,\n 24.251973033707195\n ],\n [\n -80.035400390625,\n 24.881453301317965\n ],\n [\n -80.09582519531249,\n 25.31920114076412\n ],\n [\n -82.3919677734375,\n 24.761796517185815\n ]\n ]\n ]\n }\n }\n ]\n}","volume":"538","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1de4b07657d199cd6a","contributors":{"authors":[{"text":"Turk, Daniela","contributorId":171861,"corporation":false,"usgs":false,"family":"Turk","given":"Daniela","email":"","affiliations":[{"id":24650,"text":"Dalhousie University","active":true,"usgs":false}],"preferred":false,"id":638958,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Yates, Kimberly K. 0000-0001-8764-0358 kyates@usgs.gov","orcid":"https://orcid.org/0000-0001-8764-0358","contributorId":420,"corporation":false,"usgs":true,"family":"Yates","given":"Kimberly","email":"kyates@usgs.gov","middleInitial":"K.","affiliations":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":638959,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Vega-Rodriguez, Maria","contributorId":171862,"corporation":false,"usgs":false,"family":"Vega-Rodriguez","given":"Maria","email":"","affiliations":[{"id":7163,"text":"University of South Florida","active":true,"usgs":false}],"preferred":false,"id":638960,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Toro-Farmer, Gerardo","contributorId":171863,"corporation":false,"usgs":false,"family":"Toro-Farmer","given":"Gerardo","email":"","affiliations":[{"id":7163,"text":"University of South Florida","active":true,"usgs":false}],"preferred":false,"id":638961,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"L’Esperance, Chris","contributorId":171865,"corporation":false,"usgs":false,"family":"L’Esperance","given":"Chris","email":"","affiliations":[{"id":24650,"text":"Dalhousie University","active":true,"usgs":false}],"preferred":false,"id":638962,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Melo, Nelson","contributorId":171864,"corporation":false,"usgs":false,"family":"Melo","given":"Nelson","email":"","affiliations":[{"id":26959,"text":"NOAA and Cooperative Institute for Marine and Atmospheric Studies, UM","active":true,"usgs":false}],"preferred":false,"id":638963,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Ramsewak, Deanesch","contributorId":171866,"corporation":false,"usgs":false,"family":"Ramsewak","given":"Deanesch","email":"","affiliations":[{"id":26960,"text":"University of Trinidad and Tobago","active":true,"usgs":false}],"preferred":false,"id":638964,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Estrada, S. Cerdeira","contributorId":171867,"corporation":false,"usgs":false,"family":"Estrada","given":"S.","email":"","middleInitial":"Cerdeira","affiliations":[{"id":26961,"text":"National Comission for Knowledge and Use of Biodiversity, Mexico","active":true,"usgs":false}],"preferred":false,"id":638965,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Muller-Karger, Frank E.","contributorId":68230,"corporation":false,"usgs":true,"family":"Muller-Karger","given":"Frank","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":638966,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Herwitz, Stan R.","contributorId":171868,"corporation":false,"usgs":false,"family":"Herwitz","given":"Stan","email":"","middleInitial":"R.","affiliations":[{"id":26962,"text":"NASA UAV Collaborative, Moffet Field, CA","active":true,"usgs":false}],"preferred":false,"id":638967,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"McGillis, Wade","contributorId":171869,"corporation":false,"usgs":false,"family":"McGillis","given":"Wade","email":"","affiliations":[{"id":26963,"text":"LDEO, Columbia University","active":true,"usgs":false}],"preferred":false,"id":638968,"contributorType":{"id":1,"text":"Authors"},"rank":11}]}} ,{"id":70173897,"text":"70173897 - 2016 - How can present and future satellite missions support scientific studies that address ocean acidification?","interactions":[],"lastModifiedDate":"2016-06-15T10:31:36","indexId":"70173897","displayToPublicDate":"2016-06-15T11:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2929,"text":"Oceanography","active":true,"publicationSubtype":{"id":10}},"title":"How can present and future satellite missions support scientific studies that address ocean acidification?","docAbstract":"Space-based observations offer unique capabilities for studying spatial and temporal dynamics of the upper ocean inorganic carbon cycle and, in turn, supporting research tied to ocean acidification (OA). Satellite sensors measuring sea surface temperature, color, salinity, wind, waves, currents, and sea level enable a fuller understanding of a range of physical, chemical, and biological phenomena that drive regional OA dynamics as well as the potentially varied impacts of carbon cycle change on a broad range of ecosystems. Here, we update and expand on previous work that addresses the benefits of space-based assets for OA and carbonate system studies. Carbonate chemistry and the key processes controlling surface ocean OA variability are reviewed. Synthesis of present satellite data streams and their utility in this arena are discussed, as are opportunities on the horizon for using new satellite sensors with increased spectral, temporal, and/or spatial resolution. We outline applications that include the ability to track the biochemically dynamic nature of water masses, to map coral reefs at higher resolution, to discern functional phytoplankton groups and their relationships to acid perturbations, and to track processes that contribute to acid variation near the land-ocean interface.
","language":"English","publisher":"Oceanography Society","publisherLocation":"Washington D.C.","doi":"10.5670/oceanog.2015.35","usgsCitation":"Salisbury, J., Vandemark, D., Jonsson, B., Balch, W., Chakraborty, S., Lohrenz, S., Chapron, B., Hales, B., Mannino, A., Mathis, J.T., Reul, N., Signorini, S., Wanninkhof, R., and Yates, K.K., 2016, How can present and future satellite missions support scientific studies that address ocean acidification?: Oceanography, v. 2, no. 28, p. 108-121, https://doi.org/10.5670/oceanog.2015.35.","productDescription":"14 p.","startPage":"108","endPage":"121","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-062415","costCenters":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":470883,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.5670/oceanog.2015.35","text":"Publisher Index 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We have taken a two‐stage approach to EEW: (1) detection and initial characterization using strong‐motion data with the Earthquake Alarm Systems (ElarmS) seismic early warning package and (2) the triggering of geodetic modeling modules using Global Navigation Satellite Systems data that help provide robust estimates of large‐magnitude earthquakes. In this article we demonstrate the performance of the latter, the Geodetic First Approximation of Size and Time (G‐FAST) geodetic early warning system, using simulated displacements for the 2001Mw 6.8 Nisqually earthquake. We test the timing and performance of the two G‐FAST source characterization modules, peak ground displacement scaling, and Centroid Moment Tensor‐driven finite‐fault‐slip modeling under ideal, latent, noisy, and incomplete data conditions. We show good agreement between source parameters computed by G‐FAST with previously published and postprocessed seismic and geodetic results for all test cases and modeling modules, and we discuss the challenges with integration into the U.S. Geological Survey’s ShakeAlert EEW system.
","language":"English","publisher":"Seismological Society of America","doi":"10.1785/0220150255","usgsCitation":"Crowell, B., Schmidt, D., Bodin, P., Vidale, J., Gomberg, J.S., Hartog, J.R., Kress, V., Melbourne, T., Santillian, M., Minson, S.E., and Jamison, D., 2016, Demonstration of the Cascadia G‐FAST geodetic earthquake early warning system for the Nisqually, Washington, earthquake: Seismological Research Letters, v. 87, no. 4, p. 930-943, https://doi.org/10.1785/0220150255.","productDescription":"14 p.","startPage":"930","endPage":"943","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-070674","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":470885,"rank":2,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://digitalcommons.cwu.edu/geological_sciences/103","text":"External Repository"},{"id":324271,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Washington","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"type\": \"Polygon\",\n \"coordinates\": [\n [\n [\n -124.0081787109375,\n 46.822616668804926\n ],\n [\n -124.0081787109375,\n 47.37603463349758\n ],\n [\n -122.37670898437499,\n 47.37603463349758\n ],\n [\n -122.37670898437499,\n 46.822616668804926\n ],\n [\n -124.0081787109375,\n 46.822616668804926\n ]\n ]\n ]\n }\n }\n ]\n}","volume":"87","issue":"4","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-08","publicationStatus":"PW","scienceBaseUri":"576bb6b2e4b07657d1a22891","contributors":{"authors":[{"text":"Crowell, Brendan","contributorId":171723,"corporation":false,"usgs":false,"family":"Crowell","given":"Brendan","affiliations":[{"id":6934,"text":"University of Washington","active":true,"usgs":false}],"preferred":false,"id":638423,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schmidt, David","contributorId":7596,"corporation":false,"usgs":true,"family":"Schmidt","given":"David","affiliations":[],"preferred":false,"id":638424,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bodin, Paul","contributorId":104142,"corporation":false,"usgs":true,"family":"Bodin","given":"Paul","affiliations":[],"preferred":false,"id":638425,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Vidale, John","contributorId":95804,"corporation":false,"usgs":true,"family":"Vidale","given":"John","affiliations":[],"preferred":false,"id":638426,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Gomberg, Joan S. 0000-0002-0134-2606 gomberg@usgs.gov","orcid":"https://orcid.org/0000-0002-0134-2606","contributorId":1269,"corporation":false,"usgs":true,"family":"Gomberg","given":"Joan","email":"gomberg@usgs.gov","middleInitial":"S.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":638422,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hartog, J. 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Resource selection function (RSF) models are increasingly used in landscape genetics approaches. However, because the ecological factors that drive habitat selection may be different from those influencing dispersal and gene flow, it is important to consider explicit assumptions and spatial scales of measurement. We calculated pairwise genetic distance among 301 Dall's sheep (Ovis dalli dalli) in southcentral Alaska using an intensive noninvasive sampling effort and 15 microsatellite loci. We used multiple regression of distance matrices to assess the correlation of pairwise genetic distance and landscape resistance derived from an RSF, and combinations of landscape features hypothesized to influence dispersal. Dall's sheep gene flow was positively correlated with steep slopes, moderate peak normalized difference vegetation indices (NDVI), and open land cover. Whereas RSF covariates were significant in predicting genetic distance, the RSF model itself was not significantly correlated with Dall's sheep gene flow, suggesting that certain habitat features important during summer (rugged terrain, mid-range elevation) were not influential to effective dispersal. This work underscores that consideration of both habitat selection and landscape genetics models may be useful in developing management strategies to both meet the immediate survival of a species and allow for long-term genetic connectivity.
","language":"English","doi":"10.1111/eva.12389","usgsCitation":"Roffler, G.H., Schwartz, M.K., Pilgrim, K.L., Talbot, S.L., Sage, G.K., Adams, L., and Luikart, G., 2016, Identification of landscape features influencing gene flow: How useful are habitat selection models?: Evolutionary Applications, v. 9, no. 6, p. 805-817, https://doi.org/10.1111/eva.12389.","productDescription":"13 p.","startPage":"805","endPage":"817","numberOfPages":"13","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-063706","costCenters":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"links":[{"id":470887,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/eva.12389","text":"Publisher Index Page"},{"id":323719,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"9","issue":"6","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-03","publicationStatus":"PW","scienceBaseUri":"57626e1fe4b07657d199cd8a","chorus":{"doi":"10.1111/eva.12389","url":"http://dx.doi.org/10.1111/eva.12389","publisher":"Wiley-Blackwell","authors":"Roffler Gretchen H., Schwartz Michael K., Pilgrim Kristy L., Talbot Sandra L., Sage George K., Adams Layne G., Luikart Gordon","journalName":"Evolutionary Applications","publicationDate":"6/3/2016"},"contributors":{"authors":[{"text":"Roffler, Gretchen H. groffler@usgs.gov","contributorId":1946,"corporation":false,"usgs":true,"family":"Roffler","given":"Gretchen","email":"groffler@usgs.gov","middleInitial":"H.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638828,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schwartz, Michael K.","contributorId":102326,"corporation":false,"usgs":true,"family":"Schwartz","given":"Michael","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":638831,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Pilgrim, Kristy L.","contributorId":45222,"corporation":false,"usgs":true,"family":"Pilgrim","given":"Kristy","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":638832,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Talbot, Sandra L. 0000-0002-3312-7214 stalbot@usgs.gov","orcid":"https://orcid.org/0000-0002-3312-7214","contributorId":140512,"corporation":false,"usgs":true,"family":"Talbot","given":"Sandra","email":"stalbot@usgs.gov","middleInitial":"L.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":638829,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Sage, George K. 0000-0003-1431-2286 ksage@usgs.gov","orcid":"https://orcid.org/0000-0003-1431-2286","contributorId":87833,"corporation":false,"usgs":true,"family":"Sage","given":"George","email":"ksage@usgs.gov","middleInitial":"K.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":false,"id":638830,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Adams, Layne G. 0000-0001-6212-2896 ladams@usgs.gov","orcid":"https://orcid.org/0000-0001-6212-2896","contributorId":2776,"corporation":false,"usgs":true,"family":"Adams","given":"Layne G.","email":"ladams@usgs.gov","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638827,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Luikart, Gordon","contributorId":97409,"corporation":false,"usgs":false,"family":"Luikart","given":"Gordon","affiliations":[{"id":6580,"text":"University of Montana, Flathead Lake Biological Station, Polson, Montana 59860, USA","active":true,"usgs":false}],"preferred":false,"id":638833,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70188882,"text":"70188882 - 2016 - Surface slip during large Owens Valley earthquakes","interactions":[],"lastModifiedDate":"2017-06-27T09:52:37","indexId":"70188882","displayToPublicDate":"2016-06-15T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1757,"text":"Geochemistry, Geophysics, Geosystems","active":true,"publicationSubtype":{"id":10}},"title":"Surface slip during large Owens Valley earthquakes","docAbstract":"The 1872 Owens Valley earthquake is the third largest known historical earthquake in California. Relatively sparse field data and a complex rupture trace, however, inhibited attempts to fully resolve the slip distribution and reconcile the total moment release. We present a new, comprehensive record of surface slip based on lidar and field investigation, documenting 162 new measurements of laterally and vertically displaced landforms for 1872 and prehistoric Owens Valley earthquakes. Our lidar analysis uses a newly developed analytical tool to measure fault slip based on cross-correlation of sublinear topographic features and to produce a uniquely shaped probability density function (PDF) for each measurement. Stacking PDFs along strike to form cumulative offset probability distribution plots (COPDs) highlights common values corresponding to single and multiple-event displacements. Lateral offsets for 1872 vary systematically from ∼1.0 to 6.0 m and average 3.3 ± 1.1 m (2σ). Vertical offsets are predominantly east-down between ∼0.1 and 2.4 m, with a mean of 0.8 ± 0.5 m. The average lateral-to-vertical ratio compiled at specific sites is ∼6:1. Summing displacements across subparallel, overlapping rupture traces implies a maximum of 7–11 m and net average of 4.4 ± 1.5 m, corresponding to a geologic Mw ∼7.5 for the 1872 event. We attribute progressively higher-offset lateral COPD peaks at 7.1 ± 2.0 m, 12.8 ± 1.5 m, and 16.6 ± 1.4 m to three earlier large surface ruptures. Evaluating cumulative displacements in context with previously dated landforms in Owens Valley suggests relatively modest rates of fault slip, averaging between ∼0.6 and 1.6 mm/yr (1σ) over the late Quaternary.
","language":"English","publisher":"Geological Society of America","doi":"10.1002/2015GC006033","usgsCitation":"Haddon, E., Amos, C., Zielke, O., Jayko, A.S., and Burgmann, R., 2016, Surface slip during large Owens Valley earthquakes: Geochemistry, Geophysics, Geosystems, v. 17, no. 6, p. 2239-2269, https://doi.org/10.1002/2015GC006033.","productDescription":"31 p.","startPage":"2239","endPage":"2269","ipdsId":"IP-069700","costCenters":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"links":[{"id":470889,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/2015gc006033","text":"Publisher Index Page"},{"id":342937,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","otherGeospatial":"Owens Valley","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"type\": \"Polygon\",\n \"coordinates\": [\n [\n [\n -118.8,\n 35.7\n ],\n [\n -117.4,\n 35.7\n ],\n [\n -117.4,\n 37.7\n ],\n [\n -118.8,\n 37.7\n ],\n [\n -118.8,\n 35.7\n ]\n ]\n ]\n }\n }\n ]\n}","volume":"17","issue":"6","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-22","publicationStatus":"PW","scienceBaseUri":"59536ea9e4b062508e3c7a81","contributors":{"authors":[{"text":"Haddon, E.K.","contributorId":193553,"corporation":false,"usgs":false,"family":"Haddon","given":"E.K.","email":"","affiliations":[],"preferred":false,"id":700808,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Amos, C.B.","contributorId":193554,"corporation":false,"usgs":false,"family":"Amos","given":"C.B.","email":"","affiliations":[],"preferred":false,"id":700809,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Zielke, O.","contributorId":166853,"corporation":false,"usgs":false,"family":"Zielke","given":"O.","affiliations":[{"id":24561,"text":"KAUST","active":true,"usgs":false}],"preferred":false,"id":700810,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Jayko, Angela S. 0000-0002-7378-0330 ajayko@usgs.gov","orcid":"https://orcid.org/0000-0002-7378-0330","contributorId":2531,"corporation":false,"usgs":true,"family":"Jayko","given":"Angela","email":"ajayko@usgs.gov","middleInitial":"S.","affiliations":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":700807,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Burgmann, R.","contributorId":193555,"corporation":false,"usgs":false,"family":"Burgmann","given":"R.","affiliations":[],"preferred":false,"id":700811,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70186615,"text":"70186615 - 2016 - Pockmarks in Passamaquoddy Bay, New Brunswick, Canada","interactions":[],"lastModifiedDate":"2017-04-10T09:48:42","indexId":"70186615","displayToPublicDate":"2016-06-15T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1790,"text":"Geological Society, London, Memoirs","active":true,"publicationSubtype":{"id":10}},"title":"Pockmarks in Passamaquoddy Bay, New Brunswick, Canada","docAbstract":"Pockmarks are seafloor depressions associated with fluid escape (Judd & Hovland 2007). They proliferate in the muddy seafloors of coastal Gulf of Maine and Bay of Fundy, where they are associated with shallow natural gas likely of biogenic origin (Ussler et al. 2003; Rogers et al. 2006; Wildish et al. 2008). In North America, shallow-water pockmark fields are not reported south of Long Island Sound, despite the abundance of gassy, muddy estuaries. The absence of pockmarks south of the limit of North American glaciation suggests that local and regional heterogeneities, possibly related to glacial or sea-level history or bedrock geology, influence pockmark field distribution. In shallow-water embayments, such as Passamaquoddy Bay, New Brunswick, pockmarks can be large (>200 m diameter) and number in the thousands.
","language":"English","publisher":"The Geological Society","publisherLocation":"London","doi":"10.1144/M46.60","usgsCitation":"Brothers, L.L., Legere, C., Hughes Clark, J., Kelley, J., Barnhardt, W., Andrews, B., and Belknap, D., 2016, Pockmarks in Passamaquoddy Bay, New Brunswick, Canada: Geological Society, London, Memoirs, v. 46, p. 111-112, https://doi.org/10.1144/M46.60.","productDescription":"2 p.","startPage":"111","endPage":"112","ipdsId":"IP-061303","costCenters":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":339495,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada","state":"New Brunswick","otherGeospatial":"Passamaquoddy Bay","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"type\": \"Polygon\",\n \"coordinates\": [\n [\n [\n -67.181396484375,\n 44.91668060637917\n ],\n [\n -66.86141967773438,\n 44.91668060637917\n ],\n [\n -66.86141967773438,\n 45.188812246819055\n ],\n [\n -67.181396484375,\n 45.188812246819055\n ],\n [\n -67.181396484375,\n 44.91668060637917\n ]\n ]\n ]\n }\n }\n ]\n}","volume":"46","publishingServiceCenter":{"id":11,"text":"Pembroke PSC"},"noUsgsAuthors":false,"publicationDate":"2016-11-30","publicationStatus":"PW","scienceBaseUri":"58ebadade4b0b4d95d32009b","contributors":{"authors":[{"text":"Brothers, Laura L. 0000-0003-2986-5166 lbrothers@usgs.gov","orcid":"https://orcid.org/0000-0003-2986-5166","contributorId":176698,"corporation":false,"usgs":true,"family":"Brothers","given":"Laura","email":"lbrothers@usgs.gov","middleInitial":"L.","affiliations":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":689966,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Legere, Christine","contributorId":89781,"corporation":false,"usgs":true,"family":"Legere","given":"Christine","email":"","affiliations":[],"preferred":false,"id":689967,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hughes Clark, J.E.","contributorId":190618,"corporation":false,"usgs":false,"family":"Hughes Clark","given":"J.E.","email":"","affiliations":[],"preferred":false,"id":689968,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kelley, J.T.","contributorId":190620,"corporation":false,"usgs":false,"family":"Kelley","given":"J.T.","email":"","affiliations":[],"preferred":false,"id":689969,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Barnhardt, Walter wbarnhardt@usgs.gov","contributorId":190621,"corporation":false,"usgs":true,"family":"Barnhardt","given":"Walter","email":"wbarnhardt@usgs.gov","affiliations":[],"preferred":true,"id":689970,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Andrews, Brian bandrews@usgs.gov","contributorId":190622,"corporation":false,"usgs":true,"family":"Andrews","given":"Brian","email":"bandrews@usgs.gov","affiliations":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":689971,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Belknap, D.F.","contributorId":190623,"corporation":false,"usgs":false,"family":"Belknap","given":"D.F.","email":"","affiliations":[],"preferred":false,"id":689972,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70173545,"text":"70173545 - 2016 - Influences of summer water temperatures on the movement, distribution, and resources use of fluvial Westslope Cutthroat Trout in the South Fork Clearwater River basin","interactions":[],"lastModifiedDate":"2016-06-14T15:02:00","indexId":"70173545","displayToPublicDate":"2016-06-14T16:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"Influences of summer water temperatures on the movement, distribution, and resources use of fluvial Westslope Cutthroat Trout in the South Fork Clearwater River basin","docAbstract":"Although many Westslope Cutthroat Trout Oncorhynchus clarkii lewisi populations in Idaho are robust and stable, population densities in some systems remain below management objectives. In many of those systems, such as in the South Fork Clearwater River (SFCR) system, environmental conditions (e.g., summer temperatures) are hypothesized to limit populations of Westslope Cutthroat Trout. Radiotelemetry and snorkeling methods were used to describe seasonal movement patterns, distribution, and habitat use of Westslope Cutthroat Trout in the SFCR during the summers of 2013 and 2014. Sixty-six radio transmitters were surgically implanted into Westslope Cutthroat Trout (170–405 mm TL) from May 30–June 25, 2013, and June 20–July 6, 2014. Sedentary and mobile summer movement patterns by Westslope Cutthroat Trout were observed in the SFCR. Westslope Cutthroat Trout were generally absent from the lower SFCR. In the upper region of the SFCR, fish generally moved from the main-stem SFCR into tributaries as water temperatures increased during the summer. Fish remained in the middle region of the SFCR where water temperatures were cooler than in the upper or lower regions of the SFCR. A spatially explicit water temperature model indicated that the upper and lower regions of the SFCR exceeded thermal tolerance levels of Westslope Cutthroat Trout throughout the summer. During snorkeling, 23 Westslope Cutthroat Trout were observed in 13 sites along the SFCR and at low density (mean ± SD, 0.0003 ± 0.0001 fish/m2). The distribution of fish observed during snorkeling was consistent with the distribution of radio-tagged fish in the SFCR during the summer. Anthropogenic activities (i.e., grazing, mining, road construction, and timber harvest) in the SFCR basin likely altered the natural flow dynamics and temperature regime and thereby limited stream habitat in the SFCR system for Westslope Cutthroat Trout.
","language":"English","publisher":"American Fisheries Society","doi":"10.1080/02755947.2016.1141124","usgsCitation":"Dobos, M.E., Corsi, M., Schill, D.J., DuPont, J.M., and Quist, M.C., 2016, Influences of summer water temperatures on the movement, distribution, and resources use of fluvial Westslope Cutthroat Trout in the South Fork Clearwater River basin: North American Journal of Fisheries Management, v. 36, no. 3, p. 549-567, https://doi.org/10.1080/02755947.2016.1141124.","productDescription":"19 p.","startPage":"549","endPage":"567","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-065451","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":323599,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Idaho","otherGeospatial":"South Fork Clearwater River,","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"type\": \"Polygon\",\n \"coordinates\": [\n [\n [\n -116.3067626953125,\n 45.794339630460705\n ],\n [\n -116.3067626953125,\n 46.524855311033434\n ],\n [\n -114.356689453125,\n 46.524855311033434\n ],\n [\n -114.356689453125,\n 45.794339630460705\n ],\n [\n -116.3067626953125,\n 45.794339630460705\n ]\n ]\n ]\n }\n }\n ]\n}","volume":"36","issue":"3","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-16","publicationStatus":"PW","scienceBaseUri":"57611c9ee4b04f417c2c32ff","contributors":{"authors":[{"text":"Dobos, Marika E.","contributorId":171810,"corporation":false,"usgs":false,"family":"Dobos","given":"Marika","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":638759,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Corsi, Matthew P.","contributorId":171811,"corporation":false,"usgs":false,"family":"Corsi","given":"Matthew P.","affiliations":[],"preferred":false,"id":638760,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Schill, Daniel J.","contributorId":66562,"corporation":false,"usgs":true,"family":"Schill","given":"Daniel","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":638761,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"DuPont, Joseph M.","contributorId":171812,"corporation":false,"usgs":false,"family":"DuPont","given":"Joseph","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":638762,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Quist, Michael C. 0000-0001-8268-1839 mquist@usgs.gov","orcid":"https://orcid.org/0000-0001-8268-1839","contributorId":171392,"corporation":false,"usgs":true,"family":"Quist","given":"Michael","email":"mquist@usgs.gov","middleInitial":"C.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":false,"id":637284,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70173848,"text":"70173848 - 2016 - Biological low pH Mn(II) oxidation in a manganese deposit influenced by metal-rich groundwater","interactions":[],"lastModifiedDate":"2016-06-14T12:44:01","indexId":"70173848","displayToPublicDate":"2016-06-14T13:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":850,"text":"Applied and Environmental Microbiology","active":true,"publicationSubtype":{"id":10}},"title":"Biological low pH Mn(II) oxidation in a manganese deposit influenced by metal-rich groundwater","docAbstract":"The mechanisms, key organisms, and geochemical significance of biological low-pH Mn(II) oxidation are largely unexplored. Here, we investigated the structure of indigenous Mn(II)-oxidizing microbial communities in a secondary subsurface Mn oxide deposit influenced by acidic (pH 4.8) metal-rich groundwater in a former uranium mining area. Microbial diversity was highest in the Mn deposit compared to the adjacent soil layers and included the majority of known Mn(II)-oxidizing bacteria (MOB) and two genera of known Mn(II)-oxidizing fungi (MOF). Electron X-ray microanalysis showed that romanechite [(Ba,H2O)2(Mn4+,Mn3+)5O10] was conspicuously enriched in the deposit. Canonical correspondence analysis revealed that certain fungal, bacterial, and archaeal groups were firmly associated with the autochthonous Mn oxides. Eight MOB within the Proteobacteria, Actinobacteria, and Bacteroidetes and one MOF strain belonging to Ascomycota were isolated at pH 5.5 or 7.2 from the acidic Mn deposit. Soil-groundwater microcosms demonstrated 2.5-fold-faster Mn(II) depletion in the Mn deposit than adjacent soil layers. No depletion was observed in the abiotic controls, suggesting that biological contribution is the main driver for Mn(II) oxidation at low pH. The composition and species specificity of the native low-pH Mn(II) oxidizers were highly adapted to in situ conditions, and these organisms may play a central role in the fundamental biogeochemical processes (e.g., metal natural attenuation) occurring in the acidic, oligotrophic, and metalliferous subsoil ecosystems.
","language":"English","publisher":"American Society for Microbiology","doi":"10.1128/AEM.03844-15","usgsCitation":"Bohu, T., Akob, D.M., Abratis, M., Lazar, C., and Küsel, K., 2016, Biological low pH Mn(II) oxidation in a manganese deposit influenced by metal-rich groundwater: Applied and Environmental Microbiology, v. 82, no. 10, p. 3009-3021, https://doi.org/10.1128/AEM.03844-15.","productDescription":"13 p.","startPage":"3009","endPage":"3021","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-073478","costCenters":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"links":[{"id":470891,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1128/aem.03844-15","text":"Publisher Index Page"},{"id":323588,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"82","issue":"10","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57611c9ce4b04f417c2c32eb","contributors":{"authors":[{"text":"Bohu, Tsing","contributorId":37657,"corporation":false,"usgs":false,"family":"Bohu","given":"Tsing","email":"","affiliations":[{"id":13425,"text":"Aquatic Geomicrobiology, Institute of Ecology, Friedrich Schiller University Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638718,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Akob, Denise M. 0000-0003-1534-3025 dakob@usgs.gov","orcid":"https://orcid.org/0000-0003-1534-3025","contributorId":4980,"corporation":false,"usgs":true,"family":"Akob","given":"Denise","email":"dakob@usgs.gov","middleInitial":"M.","affiliations":[{"id":5058,"text":"Office of the Chief Scientist for Water","active":true,"usgs":true},{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638719,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Abratis, Michael","contributorId":171795,"corporation":false,"usgs":false,"family":"Abratis","given":"Michael","email":"","affiliations":[{"id":26945,"text":"Institute of Geosciences, Friedrich Schiller University Jena, Burgweg 11, 07743 Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638720,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lazar, Cassandre S.","contributorId":171796,"corporation":false,"usgs":false,"family":"Lazar","given":"Cassandre S.","affiliations":[{"id":26946,"text":"Aquatic Geomicrobiology, Institute of Ecology, Friedrich Schiller University Jena, Dornburger-Str. 159, 07743 Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638721,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Küsel, Kirsten","contributorId":96191,"corporation":false,"usgs":false,"family":"Küsel","given":"Kirsten","affiliations":[{"id":13425,"text":"Aquatic Geomicrobiology, Institute of Ecology, Friedrich Schiller University Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638722,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70173850,"text":"70173850 - 2016 - Evidence for common ancestry among viruses isolated from wild birds in Beringia and highly pathogenic intercontinental reassortant H5N1 and H5N2 influenza A viruses","interactions":[],"lastModifiedDate":"2017-02-22T09:43:42","indexId":"70173850","displayToPublicDate":"2016-06-14T12:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1988,"text":"Infection, Genetics and Evolution","active":true,"publicationSubtype":{"id":10}},"title":"Evidence for common ancestry among viruses isolated from wild birds in Beringia and highly pathogenic intercontinental reassortant H5N1 and H5N2 influenza A viruses","docAbstract":"Highly pathogenic clade 2.3.4.4 H5N8, H5N2, and H5N1 influenza A viruses were first detected in wild, captive, and domestic birds in North America in November–December 2014. In this study, we used wild waterbird samples collected in Alaska prior to the initial detection of clade 2.3.4.4 H5 influenza A viruses in North America to assess the evidence for: (1) dispersal of highly pathogenic influenza A viruses from East Asia to North America by migratory birds via Alaska and (2) ancestral origins of clade 2.3.4.4 H5 reassortant viruses in Beringia. Although we did not detect highly pathogenic influenza A viruses in our sample collection from western Alaska, we did identify viruses that contained gene segments sharing recent common ancestry with intercontinental reassortant H5N2 and H5N1 viruses. Results of phylogenetic analyses and estimates for times of most recent common ancestry support migratory birds sampled in Beringia as maintaining viral diversity closely related to novel highly pathogenic influenza A virus genotypes detected in North America. Although our results do not elucidate the route by which highly pathogenic influenza A viruses were introduced into North America, genetic evidence is consistent with the hypothesized trans-Beringian route of introduction via migratory birds.
","language":"English","publisher":"Elsevier","doi":"10.1016/j.meegid.2016.02.035","usgsCitation":"Ramey, A.M., Reeves, A.B., Teslaa, J.L., Nashold, S.W., Donnelly, T.F., Bahl, J., and Hall, J.S., 2016, Evidence for common ancestry among viruses isolated from wild birds in Beringia and highly pathogenic intercontinental reassortant H5N1 and H5N2 influenza A viruses: Infection, Genetics and Evolution, v. 40, p. 176-185, https://doi.org/10.1016/j.meegid.2016.02.035.","productDescription":"10 p.","startPage":"176","endPage":"185","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-068837","costCenters":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":470892,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.meegid.2016.02.035","text":"Publisher Index Page"},{"id":323581,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"40","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57611c9de4b04f417c2c32f5","chorus":{"doi":"10.1016/j.meegid.2016.02.035","url":"http://dx.doi.org/10.1016/j.meegid.2016.02.035","publisher":"Elsevier BV","authors":"Ramey Andrew M., Reeves Andrew B., TeSlaa Joshua L., Nashold Sean, Donnelly Tyrone, Bahl Justin, Hall Jeffrey S.","journalName":"Infection, Genetics and Evolution","publicationDate":"6/2016"},"contributors":{"authors":[{"text":"Ramey, Andrew M. 0000-0002-3601-8400 aramey@usgs.gov","orcid":"https://orcid.org/0000-0002-3601-8400","contributorId":1872,"corporation":false,"usgs":true,"family":"Ramey","given":"Andrew","email":"aramey@usgs.gov","middleInitial":"M.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638696,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Reeves, Andrew B. 0000-0002-7526-0726 areeves@usgs.gov","orcid":"https://orcid.org/0000-0002-7526-0726","contributorId":167362,"corporation":false,"usgs":true,"family":"Reeves","given":"Andrew","email":"areeves@usgs.gov","middleInitial":"B.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":638697,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Teslaa, Joshua L. 0000-0001-7802-3454 jteslaa@usgs.gov","orcid":"https://orcid.org/0000-0001-7802-3454","contributorId":5794,"corporation":false,"usgs":true,"family":"Teslaa","given":"Joshua","email":"jteslaa@usgs.gov","middleInitial":"L.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":false,"id":638699,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Nashold, Sean W. 0000-0002-8869-6633 snashold@usgs.gov","orcid":"https://orcid.org/0000-0002-8869-6633","contributorId":3611,"corporation":false,"usgs":true,"family":"Nashold","given":"Sean","email":"snashold@usgs.gov","middleInitial":"W.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":false,"id":638700,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Donnelly, Tyrone F. tfdonnelly@usgs.gov","contributorId":4369,"corporation":false,"usgs":true,"family":"Donnelly","given":"Tyrone","email":"tfdonnelly@usgs.gov","middleInitial":"F.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638698,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Bahl, Justin","contributorId":171803,"corporation":false,"usgs":false,"family":"Bahl","given":"Justin","affiliations":[{"id":26950,"text":"University of Texas School of Public Health, 1200 Pressler Street, Houston, TX 77030, USA","active":true,"usgs":false}],"preferred":false,"id":638701,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hall, Jeffrey S. 0000-0001-5599-2826 jshall@usgs.gov","orcid":"https://orcid.org/0000-0001-5599-2826","contributorId":2254,"corporation":false,"usgs":true,"family":"Hall","given":"Jeffrey","email":"jshall@usgs.gov","middleInitial":"S.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":638702,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70173840,"text":"70173840 - 2016 - Disease prevalence and snail predation associated with swell-generated damage on the threatened coral, Acropora palmata (Lamarck)","interactions":[],"lastModifiedDate":"2016-06-14T11:39:52","indexId":"70173840","displayToPublicDate":"2016-06-14T12:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3912,"text":"Frontiers in Marine Science","onlineIssn":"2296-7745","active":true,"publicationSubtype":{"id":10}},"title":"Disease prevalence and snail predation associated with swell-generated damage on the threatened coral, Acropora palmata (Lamarck)","docAbstract":"Disturbances such as tropical storms cause coral mortality and reduce coral cover as a direct result of physical damage. Storms can be one of the most important disturbances in coral reef ecosystems, and it is crucial to understand their long-term impacts on coral populations. The primary objective of this study was to determine trends in disease prevalence and snail predation on damaged and undamaged colonies of the threatened coral species, Acropora palmata, following an episode of heavy ocean swells in the US Virgin Islands (USVI). At three sites on St. Thomas and St. John, colonies of A. palmata were surveyed monthly over 1 year following a series of large swells in March 2008 that fragmented 30–93% of colonies on monitored reefs. Post-disturbance surveys conducted from April 2008 through March 2009 showed that swell-generated damage to A. palmata caused negative indirect effects that compounded the initial direct effects of physical disturbance. During the 12 months after the swell event, white pox disease prevalence was 41% higher for colonies that sustained damage from the swells than for undamaged colonies (df = 207, p = 0.01) with greatest differences in disease prevalence occurring during warm water months. In addition, the corallivorous snail, Coralliophila abbreviata, was 46% more abundant on damaged corals than undamaged corals during the 12 months after the swell event (df = 207, p = 0.006).
","language":"English","publisher":"Frontiers","doi":"10.3389/fmars.2016.00077","usgsCitation":"Bright, A.J., Rogers, C.S., Brandt, M.E., Muller, E., and Smith, T.B., 2016, Disease prevalence and snail predation associated with swell-generated damage on the threatened coral, Acropora palmata (Lamarck): Frontiers in Marine Science, v. 3, Article 77, https://doi.org/10.3389/fmars.2016.00077.","productDescription":"Article 77","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-053130","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":470893,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3389/fmars.2016.00077","text":"Publisher Index Page"},{"id":323577,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"3","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-24","publicationStatus":"PW","scienceBaseUri":"57611c9ce4b04f417c2c32ef","contributors":{"authors":[{"text":"Bright, Allan J.","contributorId":171793,"corporation":false,"usgs":false,"family":"Bright","given":"Allan","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":638634,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rogers, Caroline S. 0000-0001-9056-6961 caroline_rogers@usgs.gov","orcid":"https://orcid.org/0000-0001-9056-6961","contributorId":3126,"corporation":false,"usgs":true,"family":"Rogers","given":"Caroline","email":"caroline_rogers@usgs.gov","middleInitial":"S.","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":638633,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Brandt, Marilyn E.","contributorId":171794,"corporation":false,"usgs":false,"family":"Brandt","given":"Marilyn","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":638679,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Muller, Erinn","contributorId":149012,"corporation":false,"usgs":false,"family":"Muller","given":"Erinn","affiliations":[],"preferred":false,"id":638680,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Smith, Tyler B.","contributorId":150546,"corporation":false,"usgs":false,"family":"Smith","given":"Tyler","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":638635,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70173846,"text":"70173846 - 2016 - Wastewater disposal from unconventional oil and gas development degrades stream quality at a West Virginia injection facility","interactions":[],"lastModifiedDate":"2018-08-07T12:10:53","indexId":"70173846","displayToPublicDate":"2016-06-14T12:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1565,"text":"Environmental Science & Technology","onlineIssn":"1520-5851","printIssn":"0013-936X","active":true,"publicationSubtype":{"id":10}},"title":"Wastewater disposal from unconventional oil and gas development degrades stream quality at a West Virginia injection facility","docAbstract":"The development of unconventional oil and gas (UOG) resources has rapidly increased in recent years; however, the environmental impacts and risks are poorly understood. A single well can generate millions of liters of wastewater, representing a mixture of formation brine and injected hydraulic fracturing fluids. One of the most common methods for wastewater disposal is underground injection; we are assessing potential risks of this method through an intensive, interdisciplinary study at an injection disposal facility in West Virginia. In June 2014, waters collected downstream from the site had elevated specific conductance (416 μS/cm) and Na, Cl, Ba, Br, Sr, and Li concentrations, compared to upstream, background waters (conductivity, 74 μS/cm). Elevated TDS, a marker of UOG wastewater, provided an early indication of impacts in the stream. Wastewater inputs are also evident by changes in 87Sr/86Sr in streamwater adjacent to the disposal facility. Sediments downstream from the facility were enriched in Ra and had high bioavailable Fe(III) concentrations relative to upstream sediments. Microbial communities in downstream sediments had lower diversity and shifts in composition. Although the hydrologic pathways were not able to be assessed, these data provide evidence demonstrating that activities at the disposal facility are impacting a nearby stream and altering the biogeochemistry of nearby ecosystems.
","language":"English","publisher":"American Chemical Society","doi":"10.1021/acs.est.6b00428","usgsCitation":"Akob, D.M., Mumford, A.C., Orem, W.H., Engle, M.A., Klinges, J., Kent, D.B., and Cozzarelli, I.M., 2016, Wastewater disposal from unconventional oil and gas development degrades stream quality at a West Virginia injection facility: Environmental Science & Technology, v. 50, no. 11, p. 5517-5525, https://doi.org/10.1021/acs.est.6b00428.","productDescription":"9 p.","startPage":"5517","endPage":"5525","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-075053","costCenters":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":589,"text":"Toxic Substances Hydrology Program","active":true,"usgs":true}],"links":[{"id":470895,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1021/acs.est.6b00428","text":"Publisher Index Page"},{"id":323576,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"50","issue":"11","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-18","publicationStatus":"PW","scienceBaseUri":"57611c9fe4b04f417c2c330c","chorus":{"doi":"10.1021/acs.est.6b00428","url":"http://dx.doi.org/10.1021/acs.est.6b00428","publisher":"American Chemical Society (ACS)","authors":"Akob Denise M., Mumford Adam C., Orem William, Engle Mark A., Klinges J. Grace, Kent Douglas B., Cozzarelli Isabelle M.","journalName":"Environmental Science & Technology","publicationDate":"6/7/2016","auditedOn":"5/20/2016","publiclyAccessibleDate":"5/18/2016"},"contributors":{"authors":[{"text":"Akob, Denise M. 0000-0003-1534-3025 dakob@usgs.gov","orcid":"https://orcid.org/0000-0003-1534-3025","contributorId":4980,"corporation":false,"usgs":true,"family":"Akob","given":"Denise","email":"dakob@usgs.gov","middleInitial":"M.","affiliations":[{"id":5058,"text":"Office of the Chief Scientist for Water","active":true,"usgs":true},{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638657,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mumford, Adam C. 0000-0002-8082-8910 amumford@usgs.gov","orcid":"https://orcid.org/0000-0002-8082-8910","contributorId":171791,"corporation":false,"usgs":true,"family":"Mumford","given":"Adam","email":"amumford@usgs.gov","middleInitial":"C.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638658,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Orem, William H. 0000-0003-4990-0539 borem@usgs.gov","orcid":"https://orcid.org/0000-0003-4990-0539","contributorId":577,"corporation":false,"usgs":true,"family":"Orem","given":"William","email":"borem@usgs.gov","middleInitial":"H.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":638659,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Engle, Mark A. 0000-0001-5258-7374 engle@usgs.gov","orcid":"https://orcid.org/0000-0001-5258-7374","contributorId":584,"corporation":false,"usgs":true,"family":"Engle","given":"Mark","email":"engle@usgs.gov","middleInitial":"A.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":638660,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Klinges, Julia jklinges@usgs.gov","contributorId":171792,"corporation":false,"usgs":true,"family":"Klinges","given":"Julia","email":"jklinges@usgs.gov","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638661,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Kent, Douglas B. 0000-0003-3758-8322 dbkent@usgs.gov","orcid":"https://orcid.org/0000-0003-3758-8322","contributorId":1871,"corporation":false,"usgs":true,"family":"Kent","given":"Douglas","email":"dbkent@usgs.gov","middleInitial":"B.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":638662,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Cozzarelli, Isabelle M. 0000-0002-5123-1007 icozzare@usgs.gov","orcid":"https://orcid.org/0000-0002-5123-1007","contributorId":1693,"corporation":false,"usgs":true,"family":"Cozzarelli","given":"Isabelle","email":"icozzare@usgs.gov","middleInitial":"M.","affiliations":[{"id":49175,"text":"Geology, Energy & Minerals Science Center","active":true,"usgs":true},{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638663,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70173847,"text":"70173847 - 2016 - Endocrine disrupting activities of surface water associated with a West Virginia oil and gas industry wastewater disposal site","interactions":[],"lastModifiedDate":"2018-08-07T11:56:27","indexId":"70173847","displayToPublicDate":"2016-06-14T12:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Endocrine disrupting activities of surface water associated with a West Virginia oil and gas industry wastewater disposal site","docAbstract":"Currently, >95% of end disposal of hydraulic fracturing wastewater from unconventional oil and gas operations in the US occurs via injection wells. Key data gaps exist in understanding the potential impact of underground injection on surface water quality and environmental health. The goal of this study was to assess endocrine disrupting activity in surface water at a West Virginia injection well disposal site. Water samples were collected from a background site in the area and upstream, on, and downstream of the disposal facility. Samples were solid-phase extracted, and extracts assessed for agonist and antagonist hormonal activities for five hormone receptors in mammalian and yeast reporter gene assays. Compared to reference water extracts upstream and distal to the disposal well, samples collected adjacent and downstream exhibited considerably higher antagonist activity for the estrogen, androgen, progesterone, glucocorticoid and thyroid hormone receptors. In contrast, low levels of agonist activity were measured in upstream/distal sites, and were inhibited or absent at downstream sites with significant antagonism. Concurrent analyses by partner laboratories (published separately) describe the analytical and geochemical profiling of the water; elevated conductivity as well as high sodium, chloride, strontium, and barium concentrations indicate impacts due to handling of unconventional oil and gas wastewater. Notably, antagonist activities in downstream samples were at equivalent authentic standard concentrations known to disrupt reproduction and/or development in aquatic animals. Given the widespread use of injection wells for end-disposal of hydraulic fracturing wastewater, these data raise concerns for human and animal health nearby.
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The diagnostic process and overall investigation is often greatly expedited by a chronological record accompanying specimens submitted for laboratory evaluation. Knowing where and when the outbreak is taking place, what the environmental conditions and species involved are, and clinical signs in sick animals, along with necropsy findings and diagnostic test results are important for understanding the natural history or epizootiology of disease outbreaks. It becomes increasingly difficult to retrospectively obtain all of the pertinent history as time passes. The most helpful information is that which is obtained at the time of the die-off event by perceptive field biologists and other observers. Significant events preceding morbidity and/or mortality also provide valuable information on which to base corrective actions. In this chapter, readers will find information regarding what type of information should be recorded, how it should be recorded and why it is relevant to a disease investigation. A thoughtful approach in providing as much information as possible surrounding the situation including about host species and the biotic and abiotic environment, greatly aids in determining the most likely causative agent(s).
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