{"pageNumber":"1075","pageRowStart":"26850","pageSize":"25","recordCount":184743,"records":[{"id":70199425,"text":"70199425 - 2016 - External influences on ecological theory:  Report on organized oral Session 80 at the 100th Anniversary Meeting of the Ecological Society of America","interactions":[],"lastModifiedDate":"2018-09-25T11:57:16","indexId":"70199425","displayToPublicDate":"2016-09-25T11:34:11","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1121,"text":"Bulletin of the Ecological Society of America","active":true,"publicationSubtype":{"id":10}},"title":"External influences on ecological theory:  Report on organized oral Session 80 at the 100th Anniversary Meeting of the Ecological Society of America","docAbstract":"<p>The 100‐year history of the Ecological Society of America spans most of the major advances in the field of ecology, from the “niche” of Grinnell and others, to Lotka and Volterra's models of predation and competition based on the logistic growth equation, to the concept of competitive exclusion developed from experimental ecology, to genetics and evolutionary ecology and all the ramifications and specializations of these topics over the rest of the 20th and into the 21st century.</p><p>The objective of this session, sponsored by the Historical Records Committee of the ESA, was to explore how ecological concepts have been shaped and changed by influences that are external to the scientific method, such as funding priorities, ideology, politics, personalities, and differences between the ecosystems where influential ecologists developed their ideas. Among the many memorable quotations of the philosopher/poet George Santayana (1863–1952) is the often quoted and misquoted observation, “Those who cannot remember the past are condemned to repeat it.”</p>","language":"English","publisher":"Ecological Society of America","doi":"10.1002/bes2.1241","usgsCitation":"Huston, M., Ellison, A., Jackson, S.T., Frank, D., Jiang, X., Lau, M.K., Lockwood, J., Prager, S.D., Reiners, D.S., Reiners, W.A., Schulze, E., Vandermeer, J., and Werner, P.A., 2016, External influences on ecological theory:  Report on organized oral Session 80 at the 100th Anniversary Meeting of the Ecological Society of America: Bulletin of the Ecological Society of America, v. 97, no. 3, p. 311-317, https://doi.org/10.1002/bes2.1241.","productDescription":"7 p.","startPage":"311","endPage":"317","ipdsId":"IP-075739","costCenters":[{"id":569,"text":"Southwest Climate Science Center","active":true,"usgs":true}],"links":[{"id":470555,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/bes2.1241","text":"Publisher Index Page"},{"id":357706,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"97","issue":"3","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5bc03298e4b0fc368eb53a65","contributors":{"authors":[{"text":"Huston, M.A.","contributorId":28564,"corporation":false,"usgs":true,"family":"Huston","given":"M.A.","email":"","affiliations":[],"preferred":false,"id":746211,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ellison, Aaron M.","contributorId":94996,"corporation":false,"usgs":true,"family":"Ellison","given":"Aaron M.","affiliations":[],"preferred":false,"id":746212,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Jackson, Stephen T. 0000-0002-1487-4652 stjackson@usgs.gov","orcid":"https://orcid.org/0000-0002-1487-4652","contributorId":344,"corporation":false,"usgs":true,"family":"Jackson","given":"Stephen","email":"stjackson@usgs.gov","middleInitial":"T.","affiliations":[{"id":560,"text":"South Central Climate Science Center","active":true,"usgs":true},{"id":569,"text":"Southwest Climate Science Center","active":true,"usgs":true}],"preferred":true,"id":745222,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Frank, David","contributorId":13969,"corporation":false,"usgs":true,"family":"Frank","given":"David","affiliations":[],"preferred":false,"id":746213,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Jiang, X.","contributorId":150848,"corporation":false,"usgs":false,"family":"Jiang","given":"X.","email":"","affiliations":[],"preferred":false,"id":746214,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Lau, Matthew K.","contributorId":208171,"corporation":false,"usgs":false,"family":"Lau","given":"Matthew","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":746215,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Lockwood, Jeffrey A.","contributorId":208172,"corporation":false,"usgs":false,"family":"Lockwood","given":"Jeffrey A.","affiliations":[],"preferred":false,"id":746216,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Prager, Steven D.","contributorId":208173,"corporation":false,"usgs":false,"family":"Prager","given":"Steven","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":746217,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Reiners, Derek S.","contributorId":208175,"corporation":false,"usgs":false,"family":"Reiners","given":"Derek","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":746218,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Reiners, William A.","contributorId":147117,"corporation":false,"usgs":false,"family":"Reiners","given":"William","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":746219,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Schulze, Ernst-Detlef","contributorId":189321,"corporation":false,"usgs":false,"family":"Schulze","given":"Ernst-Detlef","email":"","affiliations":[],"preferred":false,"id":746220,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Vandermeer, J.H.","contributorId":14350,"corporation":false,"usgs":true,"family":"Vandermeer","given":"J.H.","email":"","affiliations":[],"preferred":false,"id":746221,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Werner, Patricia A.","contributorId":208176,"corporation":false,"usgs":false,"family":"Werner","given":"Patricia","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":746222,"contributorType":{"id":1,"text":"Authors"},"rank":13}]}}
,{"id":70176627,"text":"70176627 - 2016 - Encounters with Pinyon-Juniper influence riskier movements in Greater Sage-Grouse across the Great Basin","interactions":[],"lastModifiedDate":"2016-09-26T17:21:40","indexId":"70176627","displayToPublicDate":"2016-09-25T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3228,"text":"Rangeland Ecology and Management","onlineIssn":"1551-5028","printIssn":"1550-7424","active":true,"publicationSubtype":{"id":10}},"title":"Encounters with Pinyon-Juniper influence riskier movements in Greater Sage-Grouse across the Great Basin","docAbstract":"Fine-scale spatiotemporal studies can better identify relationships between individual survival and habitat fragmentation so that mechanistic interpretations can be made at the population level. Recent advances in Global Positioning System (GPS) technology and statistical models capable of deconstructing high-frequency location data have facilitated interpretation of animal movement within a behaviorally mechanistic framework. Habitat fragmentation due to singleleaf pinyon (Pinus monophylla; hereafter pinyon) and Utah juniper (Juniperus osteosperma; hereafter juniper) encroachment into sagebrush (Artemisia spp.) communities is a commonly implicated perturbation that can adversely influence greater sage-grouse (Centrocercus urophasianus; hereafter sage-grouse) demographic rates. Using an extensive GPS data set (233 birds and 282,954 locations) across 12 study sites within the Great Basin, we conducted a behavioral change point analysis and subsequently constructed Brownian bridge movement models from each behaviorally homogenous section. We found a positive relationship between modeled movement rate and probability of encountering pinyon-juniper with significant variation among age classes. The probability of encountering pinyon-juniper among adults was two and three times greater than that of yearlings and juveniles, respectively. However, the movement rate in response to the probability of encountering pinyon-juniper trees was 1.5 times greater for juveniles. We then assessed the risk of mortality associated with an interaction between movement rate and the probability of encountering pinyon-juniper using shared frailty models. During pinyon-juniper encounters, on average, juvenile, yearling, and adult birds experienced a 10.4%, 0.2%, and 0.3% reduction in annual survival probabilities. Populations that used pinyon-juniper habitats with a frequency ≥ 3.8 times the overall mean experienced decreases in annual survival probabilities of 71.1%, 0.9%, and 0.9%. This analytical framework identifies a likely behavioral mechanism behind how pinyon-juniper encroachment decreases habitat suitability for sage-grouse, whereby encountering pinyon-juniper stimulates faster yet riskier movements that may make sage-grouse more vulnerable to visually acute predators.","language":"English","publisher":"Elsevier","publisherLocation":"Amsterdam, Netherlands","doi":"10.1016/j.rama.2016.07.004","collaboration":"FWS, BLM, NDOW, FS","usgsCitation":"Prochazka, B.G., Coates, P.S., Ricca, M.A., Casazza, M.L., Gustafson, K.B., and Hull, J.M., 2016, Encounters with Pinyon-Juniper influence riskier movements in Greater Sage-Grouse across the Great Basin: Rangeland Ecology and Management, https://doi.org/10.1016/j.rama.2016.07.004.","onlineOnly":"Y","ipdsId":"IP-074788","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":470556,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.rama.2016.07.004","text":"Publisher Index Page"},{"id":329009,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c854","contributors":{"authors":[{"text":"Prochazka, Brian G. 0000-0001-7270-5550 bprochazka@usgs.gov","orcid":"https://orcid.org/0000-0001-7270-5550","contributorId":174839,"corporation":false,"usgs":true,"family":"Prochazka","given":"Brian","email":"bprochazka@usgs.gov","middleInitial":"G.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":649421,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Coates, Peter S. 0000-0003-2672-9994 pcoates@usgs.gov","orcid":"https://orcid.org/0000-0003-2672-9994","contributorId":3263,"corporation":false,"usgs":true,"family":"Coates","given":"Peter","email":"pcoates@usgs.gov","middleInitial":"S.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":649420,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Ricca, Mark A. 0000-0003-1576-513X mark_ricca@usgs.gov","orcid":"https://orcid.org/0000-0003-1576-513X","contributorId":139103,"corporation":false,"usgs":true,"family":"Ricca","given":"Mark","email":"mark_ricca@usgs.gov","middleInitial":"A.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":649422,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Casazza, Michael L. 0000-0002-5636-735X mike_casazza@usgs.gov","orcid":"https://orcid.org/0000-0002-5636-735X","contributorId":2091,"corporation":false,"usgs":true,"family":"Casazza","given":"Michael","email":"mike_casazza@usgs.gov","middleInitial":"L.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":649423,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Gustafson, K. Benjamin 0000-0003-3530-0372 kgustafson@usgs.gov","orcid":"https://orcid.org/0000-0003-3530-0372","contributorId":166818,"corporation":false,"usgs":true,"family":"Gustafson","given":"K.","email":"kgustafson@usgs.gov","middleInitial":"Benjamin","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":649424,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hull, Josh M.","contributorId":174840,"corporation":false,"usgs":false,"family":"Hull","given":"Josh","email":"","middleInitial":"M.","affiliations":[{"id":7214,"text":"University of California, Davis","active":true,"usgs":false}],"preferred":false,"id":649425,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70176637,"text":"70176637 - 2016 - First estimates of the probability of survival in a small-bodied, high-elevation frog (Boreal Chorus Frog, Pseudacris maculata), or how historical data can be useful","interactions":[],"lastModifiedDate":"2021-08-24T15:36:59.792178","indexId":"70176637","displayToPublicDate":"2016-09-23T17:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1176,"text":"Canadian Journal of Zoology","active":true,"publicationSubtype":{"id":10}},"displayTitle":"First estimates of the probability of survival in a small-bodied, high-elevation frog (Boreal Chorus Frog, <i>Pseudacris maculata</i>), or how historical data can be useful","title":"First estimates of the probability of survival in a small-bodied, high-elevation frog (Boreal Chorus Frog, Pseudacris maculata), or how historical data can be useful","docAbstract":"<p><span>In an era of shrinking budgets yet increasing demands for conservation, the value of existing (i.e., historical) data are elevated. Lengthy time series on common, or previously common, species are particularly valuable and may be available only through the use of historical information. We provide first estimates of the probability of survival and longevity (0.67–0.79 and 5–7 years, respectively) for a subalpine population of a small-bodied, ostensibly common amphibian, the Boreal Chorus Frog (</span><i>Pseudacris maculata</i><span> (Agassiz, 1850)), using historical data and contemporary, hypothesis-driven information–theoretic analyses. We also test a priori hypotheses about the effects of color morph (as suggested by early reports) and of drought (as suggested by recent climate predictions) on survival. Using robust mark–recapture models, we find some support for early hypotheses regarding the effect of color on survival, but we find no effect of drought. The congruence between early findings and our analyses highlights the usefulness of historical information in providing raw data for contemporary analyses and context for conservation and management decisions.</span></p>","language":"English","publisher":"NRC Research Press","doi":"10.1139/cjz-2016-0024","usgsCitation":"Muths, E.L., Scherer, R.D., Amburgey, S.M., Matthews, T., Spencer, A.W., and Corn, P., 2016, First estimates of the probability of survival in a small-bodied, high-elevation frog (Boreal Chorus Frog, Pseudacris maculata), or how historical data can be useful: Canadian Journal of Zoology, v. 94, no. 9, p. 599-606, https://doi.org/10.1139/cjz-2016-0024.","productDescription":"8 p.","startPage":"599","endPage":"606","ipdsId":"IP-064683","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":488529,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"http://hdl.handle.net/1807/73513","text":"External Repository"},{"id":328941,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"94","issue":"9","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c856","contributors":{"authors":[{"text":"Muths, Erin L. 0000-0002-5498-3132 muthse@usgs.gov","orcid":"https://orcid.org/0000-0002-5498-3132","contributorId":1260,"corporation":false,"usgs":true,"family":"Muths","given":"Erin","email":"muthse@usgs.gov","middleInitial":"L.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":649575,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Scherer, R. D.","contributorId":8061,"corporation":false,"usgs":false,"family":"Scherer","given":"R.","email":"","middleInitial":"D.","affiliations":[{"id":6674,"text":"Department of Integrative Biology, University of Colorado Denver","active":true,"usgs":false}],"preferred":false,"id":649576,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Amburgey, S. M.","contributorId":174896,"corporation":false,"usgs":false,"family":"Amburgey","given":"S.","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":649577,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Matthews, T.","contributorId":174897,"corporation":false,"usgs":false,"family":"Matthews","given":"T.","email":"","affiliations":[],"preferred":false,"id":649578,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Spencer, A. W.","contributorId":174898,"corporation":false,"usgs":false,"family":"Spencer","given":"A.","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":649579,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Corn, P.S.","contributorId":63751,"corporation":false,"usgs":true,"family":"Corn","given":"P.S.","affiliations":[],"preferred":false,"id":649580,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70176077,"text":"sir20165122 - 2016 - Environmental conditions in the Namskaket Marsh Area, Orleans, Massachusetts: A summary of studies by the U.S. Geological Survey, 1989–2011","interactions":[],"lastModifiedDate":"2018-04-03T11:27:59","indexId":"sir20165122","displayToPublicDate":"2016-09-23T13:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-5122","title":"Environmental conditions in the Namskaket Marsh Area, Orleans, Massachusetts: A summary of studies by the U.S. Geological Survey, 1989–2011","docAbstract":"<p>Namskaket Marsh and its tidal creek system are potential receptors for a treated wastewater plume originating from a septage treatment facility in the northwest part of Orleans, Massachusetts, on Cape Cod. From 1989 to 2011, the U.S. Geological Survey, in cooperation with State and local partners, conducted a series of studies in the Namskaket Marsh area to characterize the potential effects of the plume on the marsh and its tidal creek system. Studies included characterizing the baseline vegetation and salinity distribution in the marsh, monitoring the movement of the wastewater plume downgradient of the septage treatment facility, and sampling nutrient concentrations in the tidal creek system during a baseline period prior to the arrival of the plume at the marsh boundary. The Inner Namskaket Marsh baseline vegetation survey in 1995 found it to be dominated by <i>Phragmites australis</i> (common reed, 44 percent of vegetative cover), <i>Spartina patens</i> (salt marsh hay, 17 percent), and <i>Spartina alterniflora</i> (cordgrass, 9 percent). <i>Phragmites</i> occurrence was correlated with shallow pore-water salinity in the marsh peat and was largely confined to areas with salinities less than 4 parts per thousand. Baseline, ebb-tide nutrient concentrations at the tidal creek sampling stations during 1994&ndash;96 showed strong seasonal variations for ammonium, likely associated with the seasonal cycle of growth and senescence for the dominant salt marsh grasses (<i>S. alterniflora</i> and <i>S. patens</i>). The seasonal cycle for nitrate was generally less pronounced.</p>\n<p>The movement of the wastewater plume has been monitored from its source at the septage treatment facility to areas immediately adjacent to and beneath the most inland part of the marsh. In late 1994, the plume was first detected by borehole geophysical logging in observation wells along the Cape Cod Rail Trail (rail trail), 600 feet northwest of the infiltration beds, at an elevation of 47 to 53 feet below the National Geodetic Vertical Datum of 1929 (NGVD 29). At the rail trail, the plume was largely confined below a 3- to 8-foot-thick silt/clay layer detected by borehole geophysical logging and confirmed by lithologic samples. By early 1998, a second plume segment was detected above this silt/clay layer at the rail trail, near the plume&rsquo;s southwest boundary. Groundwater sampling in 2003&ndash;4 at additional stations southwest of the main plume, as well as beneath Namskaket Marsh, defined the extent of this shallow plume segment in glacial sands underlying the marsh.</p>\n<p>The tidal creek sampling stations established in the 1990s were resampled in 2003&ndash;4 and 2010&ndash;11 to evaluate potential effects of the treated wastewater plume on creek water quality. The annual medians of the 2011 biweekly nitrate and total dissolved nitrogen concentrations were determined for each station and compared to the annual medians of biweekly samples for the baseline years 1994, 1995, and 1996. At all stations, the 2011 median nitrate concentrations were within the range of medians for the 3 baseline years. A similar result was obtained for total dissolved nitrogen. We conclude that the 2011 creek samples, collected approximately 8 years after the shallow plume segment was first detected beneath the marsh, do not show evidence of elevated nitrate or total dissolved nitrogen concentrations attributable to discharge of either the shallow or deep segments of the treated wastewater plume.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20165122","collaboration":"Prepared in cooperation with the Orleans, Brewster, and Eastham Groundwater Protection District","usgsCitation":"Weiskel, P.K., Barbaro, J.R., and DeSimone, L.A., 2016, Environmental conditions in the Namskaket Marsh area, Orleans, Massachusetts—A summary of studies by the U.S. Geological Survey, 1989–2011: U.S. Geological Survey Scientific Investigations Report 2016–5122, 29 p., https://dx.doi.org/10.3133/sir20165122.","productDescription":"viii, 29 p.","numberOfPages":"42","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-072329","costCenters":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"links":[{"id":328802,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2016/5122/sir20165122.pdf","text":"Report","size":"1.33 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2016-5122"},{"id":328801,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2016/5122/coverthb.jpg"}],"country":"United States","state":"Massachusetts","city":"Orleans","otherGeospatial":"Namskaket Marsh Area","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -70.03174781799316,\n              41.768623062506876\n            ],\n            [\n              -70.03174781799316,\n              41.79998325207397\n            ],\n            [\n              -69.99750137329102,\n              41.79998325207397\n            ],\n            [\n              -69.99750137329102,\n              41.768623062506876\n            ],\n            [\n              -70.03174781799316,\n              41.768623062506876\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"mailto:dc_nweng@usgs.gov\">Director</a>, New England Water Science Center<br /> U.S. Geological Survey <br /> 10 Bearfoot Road <br /> Northborough, MA 01532</p>\n<p>Or Visit our Web site at:<br /> <a href=\"http://newengland.water.usgs.gov\">http://newengland.water.usgs.gov</a></p>","tableOfContents":"<ul>\n<li>Acknowledgments</li>\n<li>Abstract</li>\n<li>Introduction</li>\n<li>Baseline Environmental Conditions</li>\n<li>Treated Wastewater Plume</li>\n<li>Namskaket Creek Water Quality&nbsp;</li>\n<li>Summary and Conclusions</li>\n<li>References Cited</li>\n</ul>","publishingServiceCenter":{"id":11,"text":"Pembroke PSC"},"publishedDate":"2016-09-23","noUsgsAuthors":false,"publicationDate":"2016-09-23","publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c85a","contributors":{"authors":[{"text":"Weiskel, Peter K. pweiskel@usgs.gov","contributorId":1099,"corporation":false,"usgs":true,"family":"Weiskel","given":"Peter","email":"pweiskel@usgs.gov","middleInitial":"K.","affiliations":[{"id":376,"text":"Massachusetts Water Science Center","active":true,"usgs":true},{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":647023,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Barbaro, Jeffrey R. 0000-0002-6107-2142 jrbarbar@usgs.gov","orcid":"https://orcid.org/0000-0002-6107-2142","contributorId":1626,"corporation":false,"usgs":true,"family":"Barbaro","given":"Jeffrey","email":"jrbarbar@usgs.gov","middleInitial":"R.","affiliations":[{"id":376,"text":"Massachusetts Water Science Center","active":true,"usgs":true},{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":647024,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"DeSimone, Leslie A. 0000-0003-0774-9607 ldesimon@usgs.gov","orcid":"https://orcid.org/0000-0003-0774-9607","contributorId":176711,"corporation":false,"usgs":true,"family":"DeSimone","given":"Leslie A.","email":"ldesimon@usgs.gov","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true},{"id":376,"text":"Massachusetts Water Science Center","active":true,"usgs":true}],"preferred":false,"id":647025,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70176105,"text":"ds1017 - 2016 - Digital geologic map data for the Ozark National Scenic Riverways and adjacent areas along the Current River and Jacks Fork, Missouri","interactions":[],"lastModifiedDate":"2016-09-23T10:27:59","indexId":"ds1017","displayToPublicDate":"2016-09-23T09:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":310,"text":"Data Series","code":"DS","onlineIssn":"2327-638X","printIssn":"2327-0271","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"1017","title":"Digital geologic map data for the Ozark National Scenic Riverways and adjacent areas along the Current River and Jacks Fork, Missouri","docAbstract":"<p>The geology of the Ozark National Scenic Riverways (ONSR) in southern Missouri has been mapped at 1:24,000 scale. This endeavor was achieved through the combined efforts of U.S. Geological Survey and Missouri Geological Survey individual quadrangle mapping and additional fieldwork by the authors of this report. Geologic data covering the area of the ONSR and a 1-mile (1.6-kilometer) buffer zone surrounding the park, as well as geologic data from a few key adjoining areas, have been compiled into a single, seamless geographic information system database. The intent is to provide base geologic information for natural science research and land management in the park and surrounding areas. The data are served online at ScienceBase (<a href=\"https://www.sciencebase.gov/catalog/\">https://www.sciencebase.gov/catalog/</a>), where they are provided in Environmental Systems Research Institute (ESRI) file geodatabase format, and are accompanied by metadata files. These data can be accessed at: <a href=\"http://dx.doi.org/10.5066/F7CJ8BKB\">http://dx.doi.org/10.5066/F7CJ8BKB</a>. Additional detailed geologic information about the ONSR and surrounding areas is available in the separate 1:24,000-scale quadrangle maps and in a 1:100,000-scale map and report on the regional geology.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ds1017","usgsCitation":"Weary, D.J., Orndorff, R.C., Harrison, R.W., and Weems, R.E., 2016, Digital geologic map data for the Ozark National Scenic Riverways and adjacent areas along the Current River and Jacks Fork, Missouri: U.S. Geological Survey Data Series 1017, 14 p., https://dx.doi.org/10.3133/ds1017.","productDescription":"Report: iv, 14 p., Data Release","startPage":"1","endPage":"14","numberOfPages":"22","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-055549","costCenters":[{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true}],"links":[{"id":438545,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7CJ8BKB","text":"USGS data release","linkHelpText":"Digital geologic map data for the Ozark National Scenic Riverways and adjacent areas along the Current River and Jacks Fork, Missouri"},{"id":328530,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/ds/1017/coverthb2.jpg"},{"id":328531,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/ds/1017/ds1017.pdf","text":"Report","size":"3.52 MB","linkFileType":{"id":1,"text":"pdf"},"description":"DS 1017"},{"id":328532,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://dx.doi.org/10.5066/F7CJ8BKB","text":"USGS data release","description":"USGS data release","linkHelpText":"Digital geologic map data for the Ozark National Scenic Riverways and adjacent areas along the Current River and Jacks Fork, Missouri"}],"country":"United States","state":"Missouri","otherGeospatial":"Current River, Jacks Fork","geographicExtents":"{\n  \"type\": 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 ]\n}","contact":"<p>Eastern Geology and Paleoclimate Science Center<br /> U.S. Geological Survey<br /> 926A National Center<br /> 12201 Sunrise Valley Drive<br /> Reston, VA 20192<br /> <a href=\"http://geology.er.usgs.gov/egpsc/\">http://geology.er.usgs.gov/egpsc/</a></p>","tableOfContents":"<ul>\n<li>Abstract</li>\n<li>Introduction</li>\n<li>Geologic Description</li>\n<li>Description of Map Units</li>\n<li>Structural Geology</li>\n<li>Paleontology</li>\n<li>Geologic Resources</li>\n<li>References Cited</li>\n</ul>","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"publishedDate":"2016-09-23","noUsgsAuthors":false,"publicationDate":"2016-09-23","publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c85c","contributors":{"authors":[{"text":"Weary, David J. 0000-0002-6115-6397 dweary@usgs.gov","orcid":"https://orcid.org/0000-0002-6115-6397","contributorId":545,"corporation":false,"usgs":true,"family":"Weary","given":"David","email":"dweary@usgs.gov","middleInitial":"J.","affiliations":[{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true},{"id":40020,"text":"Florence Bascom Geoscience Center","active":true,"usgs":true}],"preferred":true,"id":647124,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Orndorff, Randall C. 0000-0002-8956-5803 rorndorf@usgs.gov","orcid":"https://orcid.org/0000-0002-8956-5803","contributorId":2739,"corporation":false,"usgs":true,"family":"Orndorff","given":"Randall","email":"rorndorf@usgs.gov","middleInitial":"C.","affiliations":[{"id":501,"text":"Office of Science Quality and Integrity","active":true,"usgs":true},{"id":40020,"text":"Florence Bascom Geoscience Center","active":true,"usgs":true},{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true}],"preferred":true,"id":647125,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Harrison, Richard W. rharriso@usgs.gov","contributorId":544,"corporation":false,"usgs":true,"family":"Harrison","given":"Richard W.","email":"rharriso@usgs.gov","affiliations":[{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true}],"preferred":true,"id":647126,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Weems, Robert E. 0000-0002-1907-7804 rweems@usgs.gov","orcid":"https://orcid.org/0000-0002-1907-7804","contributorId":2663,"corporation":false,"usgs":true,"family":"Weems","given":"Robert","email":"rweems@usgs.gov","middleInitial":"E.","affiliations":[{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true},{"id":40020,"text":"Florence Bascom Geoscience Center","active":true,"usgs":true}],"preferred":true,"id":647127,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70175284,"text":"sir20165115 - 2016 - Simulation of groundwater withdrawal scenarios for the Redwall-Muav and Coconino Aquifer Systems of northern and central Arizona","interactions":[],"lastModifiedDate":"2016-09-26T08:58:47","indexId":"sir20165115","displayToPublicDate":"2016-09-23T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-5115","title":"Simulation of groundwater withdrawal scenarios for the Redwall-Muav and Coconino Aquifer Systems of northern and central Arizona","docAbstract":"<p class=\"p1\">The Northern Arizona Regional Groundwater Flow Model was used to estimate the hydrologic changes, including water-level change and groundwater discharge to streams and springs, that may result from future changes in groundwater withdrawals in and near the Coconino Plateau Water Advisory Council study area, Coconino and Navajo Counties, Arizona. Three future groundwater withdrawal scenarios for tribal and nontribal uses were developed by the Coconino Plateau Water Advisory Council and were simulated for the period representing the years from 2006 through 2105. Scenario 1 assumes no major changes in groundwater use except for increased demand based on population projections. Scenario 2 assumes that a pipeline will provide a source of surface water from Lake Powell to areas near Cameron and Moenkopi that would replace local groundwater withdrawals. Scenario 3 assumes that the pipeline extends to the Flagstaff and Williams areas, and would replace groundwater demands for water in the area.</p><p class=\"p1\">The Coconino Plateau Water Advisory Council withdrawal scenarios primarily influence water levels and groundwater discharge in the Coconino Plateau basin, near the western margin of the Little Colorado River Plateau basin, and the Verde Valley subbasin. Simulated effects of the withdrawal scenarios are superimposed on effects of previous variations in groundwater withdrawals and artificial and incidental recharge. Pre-scenario variations include changes in water-levels in wells; groundwater storage; discharge to streams and springs; and evapotranspiration by plants that use groundwater. Future variations in groundwater discharge and water-levels in wells will continue to occur as a result of both the past and any future changes.</p><p class=\"p1\">Water-level variations resulting from post-2005 stresses, including groundwater withdrawals and incidental and artificial recharge, in the area of the withdrawal scenarios are primarily localized and superimposed on the regional changes caused by variations in stresses that occurred since the beginning of the initial stresses in the early 1900s through 2005. Withdrawal scenario 1 produced a broad region on the Coconino Plateau where water-levels declined 3–5 feet by 2105, and local areas with water-level declines of 100 feet or more where groundwater withdrawals are concentrated, near the City of Flagstaff Woody Mountain and Lake Mary well fields, and the towns of Tusayan, Williams, and Moenkopi. Water-level rises of 100 feet or more were simulated at areas of incidental recharge near wastewater treatment facilities near Flagstaff, Tusayan, Grand Canyon South Rim, Williams, and Munds Park.</p><p class=\"p2\">Simulated water-level change from 2006 through 2105 for scenarios 2 and 3 is mostly different from water-level change simulated for scenario 1 at the local level. For scenarios 2 and 3, water levels near Cameron in 2105 where 1–3 feet higher than simulated for scenario 1. Water levels at Moenkopi are more than 100 feet higher due to the elimination of a proposed withdrawal well that was simulated in scenario 1. Scenario 3 eliminates more groundwater withdrawals in the Flagstaff and Williams areas, simulates 1–3 feet less water-level decline than scenario 1 across much of the Coconino Plateau, and water levels that are as much as 50 feet higher than simulated by scenario 1 near withdrawal wells in the Williams and Flagstaff areas.</p><p class=\"p2\">Scenario 1 simulated the most change in groundwater discharge for the Little Colorado River below Cameron and for Oak Creek above Page Springs where declines in discharge of about 1.3 and 0.9 cubic feet per second (ft<sup>3</sup>/s), respectively, were simulated. Other simulated changes in discharge through 2105 in scenario 1 are losses of less than 0.4 ft<sup>3</sup>/s at the Upper Verde River, losses of less than 0.3 ft<sup>3</sup>/s at Havasu Creek and at Colorado River below Havasu Creek, losses of less than 0.1 ft<sup>3</sup>/s at Clear Creek, and increases in flow at the south rim springs and Chevelon Creek of less than 0.1 and 0.3 ft<sup>3</sup>/s, respectively. Simulated changes in discharge for scenarios 2 and 3 are less than for scenario 1 because of lower rates of groundwater withdrawal. Scenario 3 resulted in greater groundwater discharge than scenarios 1 and 2 at all major groundwater discharge features from 2006 through 2105 except for Clear and Chevelon Creeks, where the same groundwater discharge was simulated by each of the three scenarios.</p><p class=\"p2\">Changes in groundwater discharge are expected to occur after 2105 to all major surface features that discharge from the Redwall-Muav and Coconino aquifers because change in aquifer storage was occurring at the end of the simulation in 2105. The accuracy of simulated changes resulting from the Coconino Plateau Water Advisory Council groundwater withdrawal scenarios is dependent on the persistence of several hydrologic assumptions that are inherent in the Northern&nbsp;Arizona Regional Groundwater Flow Model including, but not limited to, the reasonably accurate simulation of (1) transmissivity distributions, (2) distributions of vertical hydraulic properties, (3) distributions of spatial rates of withdrawal and incidental recharge, (4) aquifer extents, and (5) hydrologic barriers and conduits.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20165115","collaboration":"Prepared in cooperation with the Arizona Department of Water Resources and Yavapai County","usgsCitation":"Pool, D.R., 2016, Simulation of groundwater withdrawal scenarios for the Redwall-Muav and Coconino aquifer systems of northern and central Arizona: U.S. Geological Survey Scientific Investigations Report 2016–5115, 38 p., https://dx.doi.org/10.3133/sir20165115.","productDescription":"vi, 38 p.","numberOfPages":"48","onlineOnly":"Y","ipdsId":"IP-072545","costCenters":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"links":[{"id":328682,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2016/5115/coverthb.jpg"},{"id":328683,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2016/5115/sir20165115.pdf","text":"Report","size":"7.4 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2016-5115"}],"country":"United States","state":"Arizona","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -112.5384521484375,\n              34.511083202999714\n            ],\n            [\n              -112.5384521484375,\n              36.9806150652861\n            ],\n            [\n              -110.50048828124999,\n              36.9806150652861\n            ],\n            [\n              -110.50048828124999,\n              34.511083202999714\n            ],\n            [\n              -112.5384521484375,\n              34.511083202999714\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"mailto:dc_az@usgs.gov\" data-mce-href=\"mailto:dc_az@usgs.gov\">Director</a>, Arizona Water Science Center<br> U.S. Geological Survey<br> 520 N. Park Avenue<br> Tucson, AZ 85719<br> <a href=\"http://az.water.usgs.gov/\" data-mce-href=\"http://az.water.usgs.gov/\">http://az.water.usgs.gov/</a></p>","tableOfContents":"<ul><li>Abstract&nbsp;<br></li><li>Introduction<br></li><li>Regional Hydrogeology<br></li><li>Description of the Northern Arizona Regional Groundwater Flow Model<br></li><li>Withdrawal Scenarios<br></li><li>Simulated Effects of Withdrawal Scenarios<br></li><li>Summary<br></li><li>References<br></li><li>Appendixes 1–3<br></li></ul>","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"publishedDate":"2016-09-23","noUsgsAuthors":false,"publicationDate":"2016-09-23","publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c862","contributors":{"authors":[{"text":"Pool, D. R.","contributorId":75581,"corporation":false,"usgs":true,"family":"Pool","given":"D.","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":644687,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70170129,"text":"ofr20161059 - 2016 - Gallery of melt textures developed in Westerly Granite during high-pressure triaxial friction experiments","interactions":[],"lastModifiedDate":"2016-09-23T15:26:22","indexId":"ofr20161059","displayToPublicDate":"2016-09-23T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-1059","title":"Gallery of melt textures developed in Westerly Granite during high-pressure triaxial friction experiments","docAbstract":"<h1>Introduction</h1><p>Melting occurred during stick-slip faulting of granite blocks sheared at room-dry, room-temperature conditions in a triaxial apparatus at 200–400 megapascals (MPa) confining pressure. Petrographic examinations of melt textures focused largely on the 400-MPa run products. This report presents an overview of the petrographic data collected on those samples, followed by brief descriptions of annotated versions of all the images.</p><p>Scanning electron microscope (SEM) images of the starting materials and the three examined 400-MPa samples are presented in this report. Secondary-electron (SE) and backscattered-electron (BSE) imaging techniques were used on different samples. The SE images look down on the sawcut surfaces, yielding topographic and three-dimensional textural information. The BSE imaging was done on samples cut to provide cross-sectional views of the glass-filled shear band (or zone) that developed along the sawcut. Brightness in the BSE images increases with increasing mean atomic number of the material. Additional chemical information about the quenched melt and adjoining minerals was obtained using the energy dispersive system of the SEM during BSE examinations. However, the very narrow shear-band thicknesses and common occurrence of very fine lamellar compositional layering limited the usefulness of this technique for estimating melt chemistry.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20161059","usgsCitation":"Moore, D.E., Lockner, D.A., Kilgore, B.D., and Beeler, N.M., 2016, Gallery of melt textures developed in Westerly Granite during high-pressure triaxial friction experiments: U.S. Geological Survey Open-File Report 2016–1059, 75 p., https://dx.doi.org/10.3133/ofr20161059.","productDescription":"iv, 75 p.","numberOfPages":"79","onlineOnly":"Y","ipdsId":"IP-073957","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":328890,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2016/1059/ofr20161059.pdf","text":"Report","size":"81 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2016-1059"},{"id":328889,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2016/1059/coverthb.jpg"}],"contact":"<p><a href=\"http://earthquake.usgs.gov/contactus/menloloc.php\" data-mce-href=\"http://earthquake.usgs.gov/contactus/menloloc.php\">Contact Information</a>, Menlo Park, Calif.<br> Office—Earthquake Science Center<br> U.S. Geological Survey<br> 345 Middlefield Road, MS 977<br> Menlo Park, CA 94025<br> <a href=\"http://earthquake.usgs.gov/\" data-mce-href=\"http://earthquake.usgs.gov/\">http://earthquake.usgs.gov/</a></p>","tableOfContents":"<ul><li>Introduction<br></li><li>Starting Material<br></li><li>Overview of Melt Textures<br></li><li>Discussion<br></li><li>References<br></li><li>Image Gallery<br></li></ul>","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"publishedDate":"2016-09-23","noUsgsAuthors":false,"publicationDate":"2016-09-23","publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c864","contributors":{"authors":[{"text":"Moore, Diane E. 0000-0002-8641-1075 dmoore@usgs.gov","orcid":"https://orcid.org/0000-0002-8641-1075","contributorId":2704,"corporation":false,"usgs":true,"family":"Moore","given":"Diane","email":"dmoore@usgs.gov","middleInitial":"E.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":626234,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lockner, David A. 0000-0001-8630-6833 dlockner@usgs.gov","orcid":"https://orcid.org/0000-0001-8630-6833","contributorId":567,"corporation":false,"usgs":true,"family":"Lockner","given":"David","email":"dlockner@usgs.gov","middleInitial":"A.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true},{"id":234,"text":"Earthquake Hazards Program","active":true,"usgs":true}],"preferred":true,"id":626235,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kilgore, Brian D. 0000-0003-0530-7979 bkilgore@usgs.gov","orcid":"https://orcid.org/0000-0003-0530-7979","contributorId":3887,"corporation":false,"usgs":true,"family":"Kilgore","given":"Brian","email":"bkilgore@usgs.gov","middleInitial":"D.","affiliations":[{"id":234,"text":"Earthquake Hazards Program","active":true,"usgs":true},{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":626236,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Beeler, Nicholas M. 0000-0002-3397-8481 nbeeler@usgs.gov","orcid":"https://orcid.org/0000-0002-3397-8481","contributorId":2682,"corporation":false,"usgs":true,"family":"Beeler","given":"Nicholas","email":"nbeeler@usgs.gov","middleInitial":"M.","affiliations":[{"id":234,"text":"Earthquake Hazards Program","active":true,"usgs":true},{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":626237,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70176172,"text":"ofr20161145 - 2016 - Faulting, damage, and intensity in the Canyondam earthquake of May 23, 2013","interactions":[],"lastModifiedDate":"2016-10-31T10:18:40","indexId":"ofr20161145","displayToPublicDate":"2016-09-23T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-1145","title":"Faulting, damage, and intensity in the Canyondam earthquake of May 23, 2013","docAbstract":"<p><span class=\"aBn\" data-term=\"goog_1377430826\"><span class=\"aQJ\">On Thursday</span></span><span> evening, May 23, 2013 (0347 May 24 UTC), a moment magnitude (M</span><span>w</span><span>) = 5.7 earthquake occurred northeast of Canyondam, California. A two-person team of U.S. Geological Survey scientists went to the area to search for surface rupture and to canvass damage in the communities around Lake Almanor. While the causative fault had not been identified at the time of the field survey, surface rupture was expected to have occurred just south of Lake Almanor, approximately 2–4 kilometers south of the epicenter. No surface rupture was discovered. Felt intensity among the communities around Lake Almanor appeared to vary significantly. Lake Almanor West (LAW), Lake Almanor Country Club (LACC), and Hamilton Branch (HB) experienced Modified Mercalli Intensity (MMI) ≥7, whereas other communities around the lake experienced MMI ≤6; the maximum observed intensity was MMI 8, in LAW. Damage in the high intensity areas consisted of broken and collapsed chimneys, ruptured pipes, and some damage to foundations and to structural elements within houses. Although this shaking damage is not usually expected for an M</span><span>w </span><span>5.7 earthquake, the intensities at Lake Almanor Country Club correlate with the peak ground acceleration (38 percent g) and peak ground velocity (30 centimeters per second) recorded by the California Strong Motion Instrumentation Program accelerometer located at the nearby Lake Almanor Fire Station. The intensity distribution for the three hardest hit areas (LAW, LACC, and HB) appears to increase as the azimuth from epicenter to the intensity sites approaches the fault strike. The small communities of Almanor and Prattville on the southwestern shore of Lake Almanor experienced somewhat lower intensities. The town of Canyondam experienced a lower intensity as well, despite its location up-dip of the earthquake rupture. This report contains information on the earthquake itself, the search for surface rupture, and the damage we observed and compiled from other sources.&nbsp;</span></p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20161145","usgsCitation":"Chapman, K., Gold, M.B., Boatwright, J., Sipe, J., Quitoriano, V., Dreger, D., and Hardebeck, J., 2016, Faulting, damage, and intensity in the Canyondam earthquake of May 23, 2013: U.S. Geological Survey Open-File Report 2016-1145, 49 p., https://dx.doi.org/10.3133/ofr20161145. ","productDescription":"iv, 49 p.","onlineOnly":"Y","ipdsId":"IP-079067","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":328669,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2016/1145/ofr20161145.pdf","text":"Report","size":"14.7 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2016-1145"},{"id":328668,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2016/1145/coverthb.jpg"}],"country":"United States","state":"California","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.508544921875,\n              38.46219172306828\n            ],\n            [\n              -122.508544921875,\n              40.643135583312805\n            ],\n            [\n              -119.33349609375,\n              40.643135583312805\n            ],\n            [\n              -119.33349609375,\n              38.46219172306828\n            ],\n            [\n              -122.508544921875,\n              38.46219172306828\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"http://earthquake.usgs.gov/contactus/menlo/\" target=\"_blank\" data-mce-href=\"http://earthquake.usgs.gov/contactus/menlo/\">Contact Information</a>, Menlo Park, Calif.<br>Office—Earthquake Science Center<br>U.S. Geological Survey<br>345 Middlefield Road, MS 977<br>Menlo Park, CA 94025<br><a href=\"http://earthquake.usgs.gov/\" target=\"_blank\" data-mce-href=\"http://earthquake.usgs.gov/\">http://earthquake.usgs.gov/</a></p>","tableOfContents":"<ul><li>Abstract<br></li><li>Introduction<br></li><li>Regional Seismicity<br></li><li>Regional Geology and Tectonics<br></li><li>Earthquake Mechanism, Fault, and Rupture Extent<br></li><li>Search for Surface Rupture<br></li><li>Postearthquake Damage Assessment<br></li><li>Isoseismal Distribution<br></li><li>Conclusions<br></li><li>References Cited<br></li><li>Appendix 1. Intensity Sites<br></li><li>Appendix 2. Damage Photographs<br></li></ul>","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"publishedDate":"2016-09-23","noUsgsAuthors":false,"publicationDate":"2016-09-23","publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c860","contributors":{"authors":[{"text":"Chapman, K.","contributorId":174158,"corporation":false,"usgs":false,"family":"Chapman","given":"K.","email":"","affiliations":[{"id":100,"text":"AASG National Geologic Map Database Project","active":false,"usgs":true}],"preferred":false,"id":647565,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Gold, M.B.","contributorId":176470,"corporation":false,"usgs":true,"family":"Gold","given":"M.B.","email":"","affiliations":[],"preferred":false,"id":647566,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Boatwright, John 0000-0002-6931-5241 boat@usgs.gov","orcid":"https://orcid.org/0000-0002-6931-5241","contributorId":1938,"corporation":false,"usgs":true,"family":"Boatwright","given":"John","email":"boat@usgs.gov","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":647564,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sipe, J.","contributorId":174159,"corporation":false,"usgs":false,"family":"Sipe","given":"J.","email":"","affiliations":[{"id":27371,"text":"Plumas County Office of Emergency Services","active":true,"usgs":false}],"preferred":false,"id":647567,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Quitoriano, V.","contributorId":22519,"corporation":false,"usgs":true,"family":"Quitoriano","given":"V.","email":"","affiliations":[],"preferred":false,"id":648846,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Dreger, D.","contributorId":12242,"corporation":false,"usgs":true,"family":"Dreger","given":"D.","affiliations":[],"preferred":false,"id":647569,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hardebeck, Jeanne","contributorId":174635,"corporation":false,"usgs":true,"family":"Hardebeck","given":"Jeanne","affiliations":[],"preferred":false,"id":647568,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70176644,"text":"70176644 - 2016 - Radiocarbon constraints imply reduced carbon uptake by soils during the 21st century","interactions":[],"lastModifiedDate":"2016-09-23T13:29:31","indexId":"70176644","displayToPublicDate":"2016-09-23T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3338,"text":"Science","active":true,"publicationSubtype":{"id":10}},"title":"Radiocarbon constraints imply reduced carbon uptake by soils during the 21st century","docAbstract":"Soil is the largest terrestrial carbon reservoir and may influence the sign and magnitude of carbon cycle-climate feedbacks. Many Earth system models (ESMs) estimate a significant soil carbon sink by 2100, yet the underlying carbon dynamics determining this response have not been systematically tested against observations. We used 14C data from 157 globally distributed soil profiles sampled to 1 m depth to show that ESMs underestimated the mean age of soil carbon by more than six-fold (430±50 years vs. 3100±1800 years). Consequently, ESMs overestimated the carbon sequestration potential of soils by nearly two-fold (40±27%). These biases suggest that ESMs must better represent carbon stabilization processes and the turnover time of slow and passive reservoirs when simulating future atmospheric CO2 dynamics.","language":"English","publisher":"American Association for the Advancement of Science","doi":"10.1126/science.aad4273","usgsCitation":"He, Y., Trumbore, S., Torn, M.S., Harden, J.W., Vaughn, L., Allison, S.D., and Randerson, J.T., 2016, Radiocarbon constraints imply reduced carbon uptake by soils during the 21st century: Science, v. 353, no. 6306, p. 1419-1424, https://doi.org/10.1126/science.aad4273.","productDescription":"5 p. ","startPage":"1419","endPage":"1424","ipdsId":"IP-079121","costCenters":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":470557,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://escholarship.org/uc/item/2r76q5gt","text":"External Repository"},{"id":328920,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"353","issue":"6306","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c85e","contributors":{"authors":[{"text":"He, Yujie","contributorId":32444,"corporation":false,"usgs":true,"family":"He","given":"Yujie","affiliations":[],"preferred":false,"id":649496,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Trumbore, Susan E. 0000-0003-3885-6202","orcid":"https://orcid.org/0000-0003-3885-6202","contributorId":139916,"corporation":false,"usgs":false,"family":"Trumbore","given":"Susan E.","affiliations":[{"id":13313,"text":"Max Planck Institute of Biogeochemistry","active":true,"usgs":false}],"preferred":false,"id":649497,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Torn, Margaret S.","contributorId":28179,"corporation":false,"usgs":false,"family":"Torn","given":"Margaret","email":"","middleInitial":"S.","affiliations":[{"id":6670,"text":"Lawrence Berkeley National Laboratory, Berkeley, CA","active":true,"usgs":false},{"id":6609,"text":"UC Berkeley","active":true,"usgs":false}],"preferred":false,"id":649498,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Harden, Jennifer W. 0000-0002-6570-8259 jharden@usgs.gov","orcid":"https://orcid.org/0000-0002-6570-8259","contributorId":1971,"corporation":false,"usgs":true,"family":"Harden","given":"Jennifer","email":"jharden@usgs.gov","middleInitial":"W.","affiliations":[{"id":615,"text":"Volcano Hazards Program","active":true,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true},{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":649499,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Vaughn, Lydia J.S. ","contributorId":174871,"corporation":false,"usgs":false,"family":"Vaughn","given":"Lydia J.S. ","affiliations":[],"preferred":false,"id":649500,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Allison, Steven D.","contributorId":167794,"corporation":false,"usgs":false,"family":"Allison","given":"Steven","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":649501,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Randerson, J. T.","contributorId":41181,"corporation":false,"usgs":false,"family":"Randerson","given":"J.","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":649502,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70176590,"text":"70176590 - 2016 - Pika (<i>Ochotona princeps</i>) losses from two isolated regions reflect temperature and water balance, but reflect habitat area in a mainland region","interactions":[],"lastModifiedDate":"2017-05-03T13:10:49","indexId":"70176590","displayToPublicDate":"2016-09-22T10:50:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2373,"text":"Journal of Mammalogy","onlineIssn":"1545-1542","printIssn":"0022-2372","active":true,"publicationSubtype":{"id":10}},"title":"Pika (<i>Ochotona princeps</i>) losses from two isolated regions reflect temperature and water balance, but reflect habitat area in a mainland region","docAbstract":"<p><span>Although biotic responses to contemporary climate change are spatially pervasive and often reflect synergies between climate and other ecological disturbances, the relative importance of climatic factors versus habitat extent for species persistence remains poorly understood. To address this shortcoming, we performed surveys for American pikas (</span><i>Ochotona princeps</i><span>) at &gt; 910 locations in 3 geographic regions of western North America during 2014 and 2015, complementing earlier modern (1994–2013) and historical (1898–1990) surveys. We sought to compare extirpation rates and the relative importance of climatic factors versus habitat area for pikas in a mainland-versus-islands framework. In each region, we found widespread evidence of distributional loss—local extirpations, upslope retractions, and encounter of only old sign. Locally comprehensive surveys suggest extirpation of </span><i>O. princeps</i><span> from 5 of 9 new sites from the hydrographic Great Basin and from 11 of 29 sites in northeastern California. Although American pikas were recorded as recently as 2011 in Zion National Park and in 2012 from Cedar Breaks National Monument in Utah, </span><i>O. princeps</i><span> now appears extirpated from all reported localities in both park units. Multiple logistic regressions for each region suggested that both temperature-related and water-balance-related variables estimated from DAYMET strongly explained pika persistence at sites in the Great Basin and in Utah but not in the Sierra-Cascade “mainland” portion of northeastern California. Conversely, talus-habitat area did not predict American pika persistence in the Great Basin or Utah but strongly predicted persistence in the Sierra-Cascade mainland. These results not only add new areas to our understanding of long-term trend of the American pika’s distribution, but also can inform decisions regarding allocation of conservation effort and management actions. Burgeoning research on species such as </span><i>O. princeps</i><span> has collectively demonstrated the heterogeneity and nuance with which climate can act on the distribution of mountain-dwelling mammals.</span></p>","language":"English","publisher":"Oxford University Press","doi":"10.1093/jmammal/gyw128","usgsCitation":"Beever, E.A., Perrine, J.D., Rickman, T., Flores, M., Clark, J.P., Waters, C., Weber, S.S., Yardley, B., Thoma, D.P., Chesley-Preston, T.L., Goehring, K.E., Magnuson, M., Nordensten, N., Nelson, M., and Collins, G.H., 2016, Pika (<i>Ochotona princeps</i>) losses from two isolated regions reflect temperature and water balance, but reflect habitat area in a mainland region: Journal of Mammalogy, v. 97, no. 6, p. 1495-1511, https://doi.org/10.1093/jmammal/gyw128.","productDescription":"17 p.","startPage":"1495","endPage":"1511","ipdsId":"IP-061599","costCenters":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"links":[{"id":462075,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/jmammal/gyw128","text":"Publisher Index Page"},{"id":328851,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"97","issue":"6","noUsgsAuthors":false,"publicationDate":"2016-08-25","publicationStatus":"PW","scienceBaseUri":"57f7c63ce4b0bc0bec09c866","chorus":{"doi":"10.1093/jmammal/gyw128","url":"http://dx.doi.org/10.1093/jmammal/gyw128","publisher":"Oxford University Press (OUP)","authors":"Beever Erik A., Perrine John D., Rickman Tom, Flores Mary, Clark John P., Waters Cassie, Weber Shana S., Yardley Braden, Thoma David, Chesley-Preston Tara, Goehring Kenneth E., Magnuson Michael, Nordensten Nancy, Nelson Melissa, Collins Gail H.","journalName":"Journal of Mammalogy","publicationDate":"8/25/2016"},"contributors":{"authors":[{"text":"Beever, Erik A. 0000-0002-9369-486X ebeever@usgs.gov","orcid":"https://orcid.org/0000-0002-9369-486X","contributorId":2934,"corporation":false,"usgs":true,"family":"Beever","given":"Erik","email":"ebeever@usgs.gov","middleInitial":"A.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":649297,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Perrine, John D.","contributorId":174797,"corporation":false,"usgs":false,"family":"Perrine","given":"John","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":649298,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rickman, Tom","contributorId":174798,"corporation":false,"usgs":false,"family":"Rickman","given":"Tom","email":"","affiliations":[],"preferred":false,"id":649299,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Flores, Mary","contributorId":174799,"corporation":false,"usgs":false,"family":"Flores","given":"Mary","email":"","affiliations":[],"preferred":false,"id":649300,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Clark, John P.","contributorId":174800,"corporation":false,"usgs":false,"family":"Clark","given":"John","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":649301,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Waters, Cassie","contributorId":174801,"corporation":false,"usgs":false,"family":"Waters","given":"Cassie","email":"","affiliations":[],"preferred":false,"id":649302,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Weber, Shana S.","contributorId":174802,"corporation":false,"usgs":false,"family":"Weber","given":"Shana","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":649303,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Yardley, Braden","contributorId":174803,"corporation":false,"usgs":false,"family":"Yardley","given":"Braden","email":"","affiliations":[],"preferred":false,"id":649304,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Thoma, David P.","contributorId":45975,"corporation":false,"usgs":true,"family":"Thoma","given":"David","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":649305,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Chesley-Preston, Tara L. tchesley-preston@usgs.gov","contributorId":5557,"corporation":false,"usgs":true,"family":"Chesley-Preston","given":"Tara","email":"tchesley-preston@usgs.gov","middleInitial":"L.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":649306,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Goehring, Kenneth E.","contributorId":174804,"corporation":false,"usgs":false,"family":"Goehring","given":"Kenneth","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":649307,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Magnuson, Michael","contributorId":174806,"corporation":false,"usgs":false,"family":"Magnuson","given":"Michael","email":"","affiliations":[],"preferred":false,"id":649308,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Nordensten, Nancy","contributorId":174807,"corporation":false,"usgs":false,"family":"Nordensten","given":"Nancy","email":"","affiliations":[],"preferred":false,"id":649309,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Nelson, Melissa","contributorId":174808,"corporation":false,"usgs":false,"family":"Nelson","given":"Melissa","email":"","affiliations":[],"preferred":false,"id":649310,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Collins, Gail H.","contributorId":59170,"corporation":false,"usgs":false,"family":"Collins","given":"Gail","email":"","middleInitial":"H.","affiliations":[{"id":6987,"text":"U.S. Fish and Wildlife Sevice","active":true,"usgs":false}],"preferred":false,"id":649311,"contributorType":{"id":1,"text":"Authors"},"rank":15}]}}
,{"id":70175519,"text":"sir20165116 - 2016 - Simulating groundwater flow in karst aquifers with distributed parameter models—Comparison of porous-equivalent media and hybrid flow approaches","interactions":[],"lastModifiedDate":"2016-09-22T15:54:17","indexId":"sir20165116","displayToPublicDate":"2016-09-22T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-5116","title":"Simulating groundwater flow in karst aquifers with distributed parameter models—Comparison of porous-equivalent media and hybrid flow approaches","docAbstract":"<p>Understanding karst aquifers, for purposes of their management and protection, poses unique challenges. Karst aquifers are characterized by groundwater flow through conduits (tertiary porosity), and (or) layers with interconnected pores (secondary porosity) and through intergranular porosity (primary or matrix porosity). Since the late 1960s, advances have been made in the development of numerical computer codes and the use of mathematical model applications towards the understanding of dual (primary [matrix] and secondary [fractures and conduits]) porosity groundwater flow processes, as well as characterization and management of karst aquifers. The Floridan aquifer system (FAS) in Florida and parts of Alabama, Georgia, and South Carolina is composed of a thick sequence of predominantly carbonate rocks. Karst features are present over much of its area, especially in Florida where more than 30 first-magnitude springs occur, numerous sinkholes and submerged conduits have been mapped, and numerous circular lakes within sinkhole depressions are present. Different types of mathematical models have been applied for simulation of the FAS. Most of these models are distributed parameter models based on the assumption that, like a sponge, water flows through connected pores within the aquifer system and can be simulated with the same mathematical methods applied to flow through sand and gravel aquifers; these models are usually referred to as porous-equivalent media models. The partial differential equation solved for groundwater flow is the potential flow equation of fluid mechanics, which is used when flow is dominated by potential energy and has been applied for many fluid problems in which kinetic energy terms are dropped from the differential equation solved. In many groundwater model codes (basic MODFLOW), it is assumed that the water has a constant temperature and density and that flow is laminar, such that kinetic energy has minimal impact on flow. Some models have been developed that incorporate the submerged conduits as a one-dimensional pipe network within the aquifer rather than as discrete, extremely transmissive features in a porous-equivalent medium; these submerged conduit models are usually referred to as hybrid models and may include the capability to simulate both laminar and turbulent flow in the one-dimensional pipe network. Comparisons of the application of a porous-equivalent media model with and without turbulence (MODFLOW-Conduit Flow Process mode 2 and basic MODFLOW, respectively) and a hybrid (MODFLOW-Conduit Flow Process mode 1) model to the Woodville Karst Plain near Tallahassee, Florida, indicated that for annual, monthly, or seasonal average hydrologic conditions, all methods met calibration criteria (matched observed groundwater levels and average flows). Thus, the increased effort required, such as the collection of data on conduit location, to develop a hybrid model and its increased computational burden, is not necessary for simulation of average hydrologic conditions (non-laminar flow effects on simulated head and spring discharge were minimal). However, simulation of a large storm event in the Woodville Karst Plain with daily stress periods indicated that turbulence is important for matching daily springflow hydrographs. Thus, if matching streamflow hydrographs over a storm event is required, the simulation of non-laminar flow and the location of conduits are required. The main challenge in application of the methods and approaches for developing hybrid models relates to the difficulty of mapping conduit networks or having high-quality datasets to calibrate these models. Additionally, hybrid models have long simulation times, which can preclude the use of parameter estimation for calibration. Simulation of contaminant transport that does not account for preferential flow through conduits or extremely permeable zones in any approach is ill-advised. Simulation results in other karst aquifers or other parts of the FAS may differ from the comparison demonstrated herein.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20165116","collaboration":"A product of the Water Use and Availability Science Program","usgsCitation":"Kuniansky, E.L., 2016, Simulating groundwater flow in karst aquifers with distributed parameter models—Comparison of porous-equivalent media and hybrid flow approaches: U.S. Geological Survey Scientific Investigations Report 2016–5116, 14 p., https://dx.doi.org/10.3133/sir20165116.","productDescription":"Report: v, 14 p.; Data Release","onlineOnly":"Y","ipdsId":"IP-071317","costCenters":[{"id":509,"text":"Office of the Associate Director for Water","active":true,"usgs":true}],"links":[{"id":328727,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2016/5116/sir20165116.pdf","text":"Report","size":"3.56 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2016–5116"},{"id":328833,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://dx.doi.org/10.5066/F7PK0D87","text":"USGS data release - MODFLOW and MODFLOW Conduit Flow Process data sets for simulation experiments of the Woodville Karst Plain, near Tallahassee, Florida with three different approaches and different stress periods","description":"SIR 2016–5116 Data Release"},{"id":328726,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2016/5116/coverthb.jpg"}],"country":"United States","state":"Florida","otherGeospatial":"Woodville Karst Plain","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -84.4903564453125,\n              30.04532159026885\n            ],\n            [\n              -84.4903564453125,\n              30.456368670179007\n            ],\n            [\n              -84.06875610351562,\n              30.456368670179007\n            ],\n            [\n              -84.06875610351562,\n              30.04532159026885\n            ],\n            [\n              -84.4903564453125,\n              30.04532159026885\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Chief, Caribbean-Florida Water Science Center-Florida<br>U.S. Geological Survey<br>4446 Pet Lane,&nbsp;Suite 108<br>Lutz, FL 33559–6302<br></p><p><a href=\"http://fl.water.usgs.gov/\" data-mce-href=\"http://fl.water.usgs.gov/\">http://fl.water.usgs.gov/</a></p>","tableOfContents":"<ul><li>Acknowledgments<br></li><li>Abstract<br></li><li>Introduction<br></li><li>Distributed Parameter Models<br></li><li>Model Application in the Woodville Karst Plain, Florida—Comparisons of Single-Continuum and Hybrid Models<br></li><li>Discussion<br></li><li>Conclusions<br></li><li>References Cited<br></li></ul>","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"publishedDate":"2016-09-22","noUsgsAuthors":false,"publicationDate":"2016-09-22","publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c86c","contributors":{"authors":[{"text":"Kuniansky, Eve L. 0000-0002-5581-0225 elkunian@usgs.gov","orcid":"https://orcid.org/0000-0002-5581-0225","contributorId":932,"corporation":false,"usgs":true,"family":"Kuniansky","given":"Eve","email":"elkunian@usgs.gov","middleInitial":"L.","affiliations":[{"id":509,"text":"Office of the Associate Director for Water","active":true,"usgs":true},{"id":5064,"text":"Southeast Regional Director's Office","active":true,"usgs":true}],"preferred":true,"id":645552,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70176481,"text":"ofr20161164 - 2016 - Juvenile sucker cohort tracking data summary and assessment of monitoring program, 2015","interactions":[],"lastModifiedDate":"2016-09-23T09:58:51","indexId":"ofr20161164","displayToPublicDate":"2016-09-22T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2016-1164","title":"Juvenile sucker cohort tracking data summary and assessment of monitoring program, 2015","docAbstract":"<p class=\"p1\">Populations of federally endangered Lost River (<i>Deltistes luxatus</i>) and shortnose suckers (<i>Chasmistes brevirostris</i>) in Upper Klamath Lake, Oregon, are experiencing long-term declines in abundance. Upper Klamath Lake populations are decreasing because adult mortality, which is relatively low, is not being balanced by recruitment of young adult suckers into known adult spawning aggregations. Previous sampling for juvenile suckers indicated that most juvenile sucker mortality in Upper Klamath Lake likely occurs within the first year of life. The importance of juvenile sucker mortality to the dynamics of Clear Lake Reservoir populations is less clear, and factors other than juvenile mortality (such as access to spawning habitat) play a substantial role. For example, production of age-0 juvenile suckers, as determined by fin ray annuli and fin development, has not been detected since 2013 in Clear Lake Reservoir, whereas it is detected annually in Upper Klamath Lake.</p>\n<p class=\"p1\">We initiated a long-term juvenile sucker monitoring program in 2015 designed to track cohorts through seasons and among years in both Upper Klamath Lake and Clear Lake Reservoir. Specifically, our goals are to track annual variability in age-0 sucker production, juvenile sucker survival, growth, and condition. In this first year of the monitoring program, we assessed assumptions that sampled fish were representative of populations of suckers in each lake. The size, age, and species composition of suckers were similar between randomly determined sites and fixed sites in each lake. We captured a wide size and age range of suckers using similar gear, indicating our gear did not exclude older and larger fish. We identified improvements that could be made in the monitoring program including increasing the number of randomly determined sample sites in both lakes, evaluation of gear-size selectivity, and validation of aging methods for juvenile Lost River and shortnose suckers.</p>\n<p class=\"p1\">Differing age composition of juvenile suckers between lakes in our 2015 catches and as reported in previous studies indicate that juvenile suckers are produced in relatively larger numbers each year in Upper Klamath Lake than in Clear Lake Reservoir. Most (96.6 percent) of suckers captured in Upper Klamath Lake in 2015 were age-0, whereas age-0 or age-1 suckers were not captured in Clear Lake Reservoir. Despite ample effort, age-0 suckers have not been captured in Clear Lake Reservoir since 2013. Estimated ages of suckers captured in 2015 in Clear Lake Reservoir ranged from 2 to 6 years. Low flow during spawning seasons in the only known spawning tributary to Clear Lake Reservoir (Willow Creek) appears to explain the lack of age-0 sucker production in recent years.</p>\n<p class=\"p1\">Juvenile sucker mortality is relatively higher in Upper Klamath Lake than in Clear Lake Reservoir. We compared data collected in 2015 to previously published catch rates to produce an index of annual juvenile sucker survival for these species. We calculated indices of annual apparent survival of juvenile sucker ages 0&ndash;5 years old in Clear Lake Reservoir to be between 0.37 (&plusmn;0.86 standard error [SE]) and 0.44 (&plusmn;0.84 SE). This is the first time indices of annual apparent survival for Lost River and shortnose suckers have been calculated. This estimate has the limitation of being non-species specific because not all individuals were identified to species in previous years, and suckers that were identified included both taxa. In contrast, catch rates decreased by 89 percent for juvenile Lost River suckers and decreased 50 percent for juvenile shortnose suckers in Upper Klamath Lake between August and September 2015. Very low catch rates of age-1 and older suckers in Upper Klamath Lake indicate that annual juvenile sucker survival rates are near zero.</p>\n<p class=\"p1\">Condition of suckers was assessed in 2015 based on age-0 sucker growth rates in Upper Klamath Lake and the prevalence of externally observable afflictions on suckers from both lakes. Age-0 Lost River suckers grew an average (&plusmn; standard deviation [SD]) of 0.72 (&plusmn;0.01) millimeters [mm] standard length [SL] per day, and age-0 shortnose suckers grew an average of 0.57 (&plusmn;0.04) mm SL per day in 2015. This growth rate was similar to growth rates reported for these species in Upper Klamath Lake in previous years. Opercular deformities, skin hemorrhages, black-spot causing parasites, and <i>Lernaea </i>spp. parasitism were the most common afflictions observed on suckers. Observed afflictions were primarily on suckers from Upper Klamath Lake, with the exception of <i>Lernaea </i>spp., which occurred more frequently on suckers from Clear Lake Reservoir. Opercular deformities and black-spot causing parasites were each observed on 5 percent of age-0 suckers from Upper Klamath Lake. Petechial hemorrhaging of the skin was observed on 43 percent of age-0 Lost River suckers, 38 percent of age-0 suckers of undetermined taxa, and only 24 percent of age-0 shortnose suckers from Upper Klamath Lake. Petechial hemorrhaging of the skin was only observed on a single shortnose sucker from Clear Lake Reservoir. Within Upper Klamath Lake, the prevalence of these hemorrhages was exactly twice as high as was reported in 2014.</p>\n<p class=\"p1\">&nbsp;</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20161164","usgsCitation":"Burdick, S.M., Ostberg, C.O., Hereford, M.E., and Hoy, M.S., 2016, Juvenile sucker cohort tracking data summary and assessment of monitoring program, 2015: U.S. Geological Survey Open-File Report 2016–1164, 30 p., https://dx.doi.org/10.3133/ofr20161164.","productDescription":"Report: iv, 30 p.","startPage":"1","endPage":"30","numberOfPages":"38","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-079633","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":328862,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2016/1164/coverthb.jpg"},{"id":328863,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2016/1164/ofr20161164.pdf","text":"Report","size":"1.5 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2016-1164"}],"country":"United States","state":"Oregon","county":"Klamath County","otherGeospatial":"Upper Klamath Lake","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.29980468749999,\n              43.06086137134326\n            ],\n            [\n              -121.13525390625,\n              42.706659563510385\n            ],\n            [\n              -120.750732421875,\n              41.68932225997044\n            ],\n            [\n              -121.761474609375,\n              41.492120839687786\n            ],\n            [\n              -122.58544921875,\n              41.3025710943056\n            ],\n            [\n              -123.50830078125,\n              40.48873742102282\n            ],\n            [\n              -124.288330078125,\n              40.85537053192496\n            ],\n            [\n              -123.870849609375,\n              42.00848901572399\n            ],\n            [\n              -123.431396484375,\n              41.902277040963696\n            ],\n            [\n              -123.277587890625,\n              42.04113400940809\n            ],\n            [\n              -122.29980468749999,\n              43.06086137134326\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, Western Fisheries Research Center<br> U.S. Geological Survey<br> 6505 NE 65th Street<br> Seattle, Washington 98115<br> <a href=\"http://wfrc.usgs.gov/\" target=\"blank\" data-mce-href=\"http://wfrc.usgs.gov/\">http://wfrc.usgs.gov/</a></p>","tableOfContents":"<ul>\n<li>Executive Summary</li>\n<li>Background</li>\n<li>Methods</li>\n<li>Results</li>\n<li>Discussion</li>\n<li>References Cited</li>\n</ul>","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"publishedDate":"2016-09-22","noUsgsAuthors":false,"publicationDate":"2016-09-22","publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c86a","contributors":{"authors":[{"text":"Burdick, Summer M. 0000-0002-3480-5793 sburdick@usgs.gov","orcid":"https://orcid.org/0000-0002-3480-5793","contributorId":3448,"corporation":false,"usgs":true,"family":"Burdick","given":"Summer","email":"sburdick@usgs.gov","middleInitial":"M.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":648901,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ostberg, Carl O. 0000-0003-1479-8458 costberg@usgs.gov","orcid":"https://orcid.org/0000-0003-1479-8458","contributorId":3031,"corporation":false,"usgs":true,"family":"Ostberg","given":"Carl","email":"costberg@usgs.gov","middleInitial":"O.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":648902,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hereford, Mark E.","contributorId":67369,"corporation":false,"usgs":true,"family":"Hereford","given":"Mark","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":648903,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hoy, Marshal S. 0000-0003-2828-9697 mhoy@usgs.gov","orcid":"https://orcid.org/0000-0003-2828-9697","contributorId":3033,"corporation":false,"usgs":true,"family":"Hoy","given":"Marshal","email":"mhoy@usgs.gov","middleInitial":"S.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":648904,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70177016,"text":"70177016 - 2016 - Post-release monitoring of Antillean manatees: an assessment of the Brazilian rehabilitation and release programme","interactions":[],"lastModifiedDate":"2016-10-14T12:37:49","indexId":"70177016","displayToPublicDate":"2016-09-22T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":774,"text":"Animal Conservation","active":true,"publicationSubtype":{"id":10}},"title":"Post-release monitoring of Antillean manatees: an assessment of the Brazilian rehabilitation and release programme","docAbstract":"Mammalian reintroduction programmes frequently aim to reconnect isolated sub-populations and restore population viability. However, these long-term objectives are rarely evaluated due to the inadequacy of post-release monitoring. Here, we report the results of a unique long term telemetry-based monitoring programme for rehabilitated Antillean manatees (Trichechus manatus manatus) reintroduced into selected sites in northeast Brazil with the aim of reconnecting isolated relict populations. Twenty-one satellite-tagged rehabilitated manatees, 13 males and 8 females, were released into the wild from two sites between November 2008 and June 2013. Individual accumulation curves were plotted and home ranges were calculated through the fixed kernel method using 95% of the utilization distribution. The number and size of the Centres of Activity (COAs) were calculated using 50% of the utilization distribution. Manatees displayed a dichotomous pattern of movement, with individuals either characterized by sedentary habits or by much more extensive movements. Moreover, home range size was not significantly influenced by gender, age at release or release site. COAs were strongly associated with sheltered conditions within reefs and estuaries, and also by the presence of freshwater and feeding sites. Our data confirm that manatee reintroductions in Brazil have the potential to reconnect distant sub-populations. However, pre-release identification of potential long-distance migrants is currently unfeasible, and further analysis would be required to confirm genetic mixing of distant sub-populations.","language":"English","publisher":"Wiley","doi":"10.1111/acv.12236","collaboration":"Chico Mendes Institute for Biodiversity Conservation, Brazil; Federal University of Alagoas, Brazil;  Oxford University, UK","usgsCitation":"Normande, I.C., Malhado, A.C., Reid, J.P., Viana, P., Savaget, P.V., Correia, R.A., Luna, F.O., and Ladle, R.J., 2016, Post-release monitoring of Antillean manatees: an assessment of the Brazilian rehabilitation and release programme: Animal Conservation, v. 19, no. 3, p. 235-246, https://doi.org/10.1111/acv.12236.","productDescription":"11 p. ","startPage":"235","endPage":"246","ipdsId":"IP-065127","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":329608,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Brazil","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {\n        \"stroke\": \"#555555\",\n        \"stroke-width\": 2,\n        \"stroke-opacity\": 1,\n        \"fill\": \"#555555\",\n        \"fill-opacity\": 0.5\n      },\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -51.61376953124999,\n              4.390228926463396\n            ],\n            [\n              -51.48193359375,\n              4.54357027937176\n            ],\n            [\n              -51.2841796875,\n              4.3464112753331925\n            ],\n          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-52.97607421875,\n              2.064982495867117\n            ],\n            [\n              -52.22900390625,\n              2.591888984149953\n            ],\n            [\n              -51.83349609375,\n              3.6669277409287235\n            ],\n            [\n              -51.52587890625,\n              4.324501493019203\n            ],\n            [\n              -51.61376953124999,\n              4.390228926463396\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"19","issue":"3","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2015-09-22","publicationStatus":"PW","scienceBaseUri":"5801eebfe4b0824b2d18c431","contributors":{"authors":[{"text":"Normande, Iran C.","contributorId":175382,"corporation":false,"usgs":false,"family":"Normande","given":"Iran","email":"","middleInitial":"C.","affiliations":[{"id":27563,"text":"National Research Centre for the Conservation of Aquatic Mammals, Chico Mendes Institute for Biodiversity Conservation","active":true,"usgs":false}],"preferred":false,"id":650984,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Malhado, Ana C. 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M.","affiliations":[{"id":27564,"text":"Institute of Biological and Health Sciences, Federal University of Alagoas","active":true,"usgs":false}],"preferred":false,"id":650985,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Reid, James P. 0000-0002-8497-1132 jreid@usgs.gov","orcid":"https://orcid.org/0000-0002-8497-1132","contributorId":3460,"corporation":false,"usgs":true,"family":"Reid","given":"James","email":"jreid@usgs.gov","middleInitial":"P.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":650983,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Viana, P.C.","contributorId":175384,"corporation":false,"usgs":false,"family":"Viana","given":"P.C.","email":"","affiliations":[{"id":27563,"text":"National Research Centre for the Conservation of Aquatic Mammals, Chico Mendes Institute for Biodiversity Conservation","active":true,"usgs":false}],"preferred":false,"id":650986,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Savaget, P. V. S.","contributorId":175385,"corporation":false,"usgs":false,"family":"Savaget","given":"P.","email":"","middleInitial":"V. S.","affiliations":[{"id":27563,"text":"National Research Centre for the Conservation of Aquatic Mammals, Chico Mendes Institute for Biodiversity Conservation","active":true,"usgs":false}],"preferred":false,"id":650987,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Correia, R. A.","contributorId":175386,"corporation":false,"usgs":false,"family":"Correia","given":"R.","email":"","middleInitial":"A.","affiliations":[{"id":27564,"text":"Institute of Biological and Health Sciences, Federal University of Alagoas","active":true,"usgs":false}],"preferred":false,"id":650988,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Luna, F. O.","contributorId":175387,"corporation":false,"usgs":false,"family":"Luna","given":"F.","email":"","middleInitial":"O.","affiliations":[{"id":27563,"text":"National Research Centre for the Conservation of Aquatic Mammals, Chico Mendes Institute for Biodiversity Conservation","active":true,"usgs":false}],"preferred":false,"id":650989,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Ladle, R. J.","contributorId":175388,"corporation":false,"usgs":false,"family":"Ladle","given":"R.","email":"","middleInitial":"J.","affiliations":[{"id":27564,"text":"Institute of Biological and Health Sciences, Federal University of Alagoas","active":true,"usgs":false}],"preferred":false,"id":650990,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70175143,"text":"sim3363 - 2016 - Geologic framework, hydrostratigraphy, and ichnology of the Blanco, Payton, and Rough Hollow 7.5-minute quadrangles, Blanco, Comal, Hays, and Kendall Counties, Texas","interactions":[],"lastModifiedDate":"2017-11-16T16:46:13","indexId":"sim3363","displayToPublicDate":"2016-09-21T16:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":333,"text":"Scientific Investigations Map","code":"SIM","onlineIssn":"2329-132X","printIssn":"2329-1311","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"3363","title":"Geologic framework, hydrostratigraphy, and ichnology of the Blanco, Payton, and Rough Hollow 7.5-minute quadrangles, Blanco, Comal, Hays, and Kendall Counties, Texas","docAbstract":"<p>This report presents the geologic framework, hydro­stratigraphy, and ichnology of the Trinity and Edwards Groups in the Blanco, Payton, and Rough Hollow 7.5-minute quad­rangles in Blanco, Comal, Hays, and Kendall Counties, Texas. Rocks exposed in the study area are of the Lower Cretaceous Trinity Group and lower part of the Fort Terrett Formation of the Lower Cretaceous Edwards Group. The mapped units in the study area are the Hammett Shale, Cow Creek Limestone, Hensell Sand, and Glen Rose Limestone of the Trinity Group and the lower portion of the Fort Terrett Formation of the Edwards Group. The Glen Rose Limestone is composed of the Lower and Upper Members. These Trinity Group rocks con­tain the upper and middle Trinity aquifers. The only remaining outcrops of the Edwards Group are the basal nodular member of the Fort Terrett Formation, which caps several hills in the northern portion of the study area. These rocks were deposited in an open marine to supratidal flats environment. The faulting and fracturing in the study area are part of the Balcones fault zone, an extensional system of faults that generally trends southwest to northeast in south-central Texas.</p><p>The hydrostratigraphic units of the Edwards and Trinity aquifers were mapped and described using a classification system based on fabric-selective or not-fabric-selective poros­ity types. The only hydrostratigraphic unit of the Edwards aquifer present in the study area is hydrostratigraphic unit VIII. The mapped hydrostratigraphic units of the upper Trinity aquifer are (from top to bottom) the Camp Bullis, upper evaporite, fossiliferous, and lower evaporite which are interval equivalent to the Upper Member of the Glen Rose Limestone. The middle Trinity aquifer encompasses (from top to bottom) the Lower Member of the Glen Rose Limestone, the Hensell Sand Member, and the Cow Creek Limestone Member of the Pearsall Formation. The Lower Member of the Glen Rose Limestone is subdivided into six informal hydro­stratigraphic units (from top to bottom) the Bulverde, Little Blanco, Twin Sisters, Doeppenschmidt, Rust, and Honey Creek hydrostratigraphic units.</p><p>This study used the ichnofabric index scale to interpret the amount of bioturbation in the field. Most of the geologic units in the study area are assigned to the <i>Cruziana </i>and <i>Thalassinoides </i>ichnofacies consistent with interpretations of a tidal-dominated open marine environment (sublittoral zone). Ichnofossil assemblages are dominated by <i>Thalassinoides </i>networks, but also contain <i>Cruziana, Ophiomorpha</i>, <i>Paleo­phycus</i>, <i>Planolites</i>, and Serpulid traces.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sim3363","usgsCitation":"Clark, A.K., Golab, J.A., and Morris, R.R., 2016, Geologic framework, hydrostratigraphy, and ichnology of the Blanco, Payton, and Rough Hollow 7.5-minute quadrangles, Blanco, Comal, Hays, and Kendall Counties, Texas: U.S. Geological Survey Scientific Investigations Map 3363, 21 p., 1 sheet, 1:24,000, https://dx.doi.org/10.3133/sim3363.","productDescription":"Pamphlet: v, 21 p.; Sheet: 62.28 x 46.73 inches; Table; Figure; Metadata; Read Me; Spatial Data","numberOfPages":"32","onlineOnly":"Y","ipdsId":"IP-073017","costCenters":[{"id":318,"text":"Geosciences and Environmental Change Science Center","active":true,"usgs":true}],"links":[{"id":349030,"rank":12,"type":{"id":22,"text":"Related Work"},"url":"https://doi.org/10.3133/sim3386","text":"Scientific Investigations Map 3386—","linkHelpText":"Bedrock Geology and Hydrostratigraphy of the Edwards and Trinity Aquifers Within the Driftwood and Wimberley 7.5-Minute Quadrangles, Hays and Comal Counties, Texas"},{"id":328385,"rank":4,"type":{"id":26,"text":"Sheet"},"url":"https://pubs.usgs.gov/sim/3363/sim3363_map.pdf","text":"Map","size":"9.25 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIM 3363 Map"},{"id":328382,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sim/3363/coverthb4.jpg"},{"id":328384,"rank":3,"type":{"id":20,"text":"Read Me"},"url":"https://pubs.usgs.gov/sim/3363/sim3363_ReadMe.txt","text":"Read Me","size":"8.0 kB","linkFileType":{"id":2,"text":"txt"},"description":"SIM 3363 Read 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2"},{"id":328389,"rank":7,"type":{"id":23,"text":"Spatial Data"},"url":"https://pubs.usgs.gov/sim/3363/sim3363_basemap.zip","text":"Basemap","size":"8.0 MB","linkFileType":{"id":6,"text":"zip"},"description":"SIM 3363  Basemap"},{"id":328392,"rank":8,"type":{"id":16,"text":"Metadata"},"url":"https://pubs.usgs.gov/sim/3363/sim3363_metadata.zip","text":"Metadata","size":"12.0 kB","linkFileType":{"id":6,"text":"zip"},"description":"SIM 3363  Metadata"},{"id":328388,"rank":6,"type":{"id":23,"text":"Spatial Data"},"url":"https://pubs.usgs.gov/sim/3363/sim3363_GIS.zip","text":"Shapefiles","size":"2.08 MB","linkFileType":{"id":6,"text":"zip"},"description":"SIM 3363  Shapefiles"},{"id":328394,"rank":10,"type":{"id":27,"text":"Table"},"url":"https://pubs.usgs.gov/sim/3363/sim3363-table01.pdf","text":"Table 1","size":"188 kB","linkFileType":{"id":1,"text":"pdf"},"description":"SIM 3363   Table 1"}],"country":"United States","state":"Texas","county":"Blanco County, Comal County, Hays County, 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1.0: Originally posted September 13, 2016; Version 1.1: September 20, 2016","contact":"<p>Director, USGS Texas Water Science Center<br>U.S. Geological Survey<br>1505 Ferguson Lane<br>Austin, Texas 78754-4501</p><p><a href=\"http://tx.usgs.gov/\" data-mce-href=\"http://tx.usgs.gov/\">http://tx.usgs.gov/</a></p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Geologic Framework</li><li>Hydrostratigraphy</li><li>Ichnology</li><li>Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"publishedDate":"2016-09-13","revisedDate":"2016-09-21","noUsgsAuthors":false,"publicationDate":"2016-09-13","publicationStatus":"PW","scienceBaseUri":"57d91526e4b090824ff9fa32","contributors":{"authors":[{"text":"Clark, Allan K. 0000-0003-0099-1521 akclark@usgs.gov","orcid":"https://orcid.org/0000-0003-0099-1521","contributorId":1279,"corporation":false,"usgs":true,"family":"Clark","given":"Allan","email":"akclark@usgs.gov","middleInitial":"K.","affiliations":[{"id":318,"text":"Geosciences and Environmental Change Science Center","active":true,"usgs":true},{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true}],"preferred":true,"id":644087,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Golab, James A.","contributorId":95374,"corporation":false,"usgs":true,"family":"Golab","given":"James A.","affiliations":[],"preferred":false,"id":644088,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Morris, Robert E. 0000-0001-7504-3732 brmorris@usgs.gov","orcid":"https://orcid.org/0000-0001-7504-3732","contributorId":4433,"corporation":false,"usgs":true,"family":"Morris","given":"Robert","email":"brmorris@usgs.gov","middleInitial":"E.","affiliations":[],"preferred":true,"id":644089,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70188728,"text":"70188728 - 2016 - Preliminary assessment of a previously unknown fault zone beneath the Daytona Beach sand blow cluster near Marianna, Arkansas","interactions":[],"lastModifiedDate":"2017-06-22T13:58:20","indexId":"70188728","displayToPublicDate":"2016-09-21T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3372,"text":"Seismological Research Letters","onlineIssn":"1938-2057","printIssn":"0895-0695","active":true,"publicationSubtype":{"id":10}},"title":"Preliminary assessment of a previously unknown fault zone beneath the Daytona Beach sand blow cluster near Marianna, Arkansas","docAbstract":"<p><span>We collected new high‐resolution </span><i>P</i><span>‐wave seismic‐reflection data to explore for possible faults beneath a roughly linear cluster of early to mid‐Holocene earthquake‐induced sand blows to the south of Marianna, Arkansas. The Daytona Beach sand blow deposits are located in east‐central Arkansas about 75&nbsp;km southwest of Memphis, Tennessee, and about 80&nbsp;km south of the southwestern end of the New Madrid seismic zone (NMSZ). Previous studies of these sand blows indicate that they were produced between 10,500 and 5350&nbsp;yr B.P. (before A.D. 1950). The sand blows are large and similar in size to those in the heart of the NMSZ produced by the 1811–1812 earthquakes. The seismic‐reflection profiles reveal a previously unknown zone of near‐vertical faults imaged in the 100–1100‐m depth range that are approximately coincident with a cluster of earthquake‐induced sand blows and a near‐linear surface lineament composed of air photo tonal anomalies. These interpreted faults are expressed as vertical discontinuities with the largest displacement fault showing about 40&nbsp;m of west‐side‐up displacement at the top of the Paleozoic section at about 1100&nbsp;m depth. There are about 20&nbsp;m of folding on reflections within the Eocene strata at 400&nbsp;m depth. Increasing fault displacement with depth suggests long‐term recurrent faulting. The imaged faults within the vicinity of the numerous sand blow features could be a causative earthquake source, although it does not rule out the possibility of other seismic sources nearby. These newly located faults add to a growing list of potentially active Pleistocene–Holocene faults discovered over the last two decades that are within the Mississippi embayment region but outside of the historical NMSZ.</span></p>","language":"English","publisher":"Seismological Society of America","doi":"10.1785/0220160125","usgsCitation":"Odum, J., Williams, R., Stephenson, W.J., Tuttle, M.P., and Al-Shukri, H., 2016, Preliminary assessment of a previously unknown fault zone beneath the Daytona Beach sand blow cluster near Marianna, Arkansas: Seismological Research Letters, v. 87, no. 6, p. 1453-1464, https://doi.org/10.1785/0220160125.","productDescription":"12 p.","startPage":"1453","endPage":"1464","ipdsId":"IP-078869","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":342766,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arkansas","city":"Marianna","otherGeospatial":"Daytona Beach","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -90.88027954101562,\n              34.55068030023981\n            ],\n            [\n              -90.24581909179686,\n              34.55068030023981\n            ],\n            [\n              -90.24581909179686,\n              34.96699890670367\n            ],\n            [\n              -90.88027954101562,\n              34.96699890670367\n            ],\n            [\n              -90.88027954101562,\n              34.55068030023981\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"87","issue":"6","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2016-09-14","publicationStatus":"PW","scienceBaseUri":"594cd740e4b062508e3951dc","contributors":{"authors":[{"text":"Odum, Jackson K. 0000-0003-4697-2430 odum@usgs.gov","orcid":"https://orcid.org/0000-0003-4697-2430","contributorId":1365,"corporation":false,"usgs":true,"family":"Odum","given":"Jackson K.","email":"odum@usgs.gov","affiliations":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":true,"id":699393,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Williams, Robert 0000-0002-2973-8493 rawilliams@usgs.gov","orcid":"https://orcid.org/0000-0002-2973-8493","contributorId":140741,"corporation":false,"usgs":true,"family":"Williams","given":"Robert","email":"rawilliams@usgs.gov","affiliations":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":true,"id":699394,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Stephenson, William J. 0000-0001-8699-0786 wstephens@usgs.gov","orcid":"https://orcid.org/0000-0001-8699-0786","contributorId":695,"corporation":false,"usgs":true,"family":"Stephenson","given":"William","email":"wstephens@usgs.gov","middleInitial":"J.","affiliations":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":true,"id":699395,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Tuttle, Martitia P.","contributorId":139388,"corporation":false,"usgs":false,"family":"Tuttle","given":"Martitia","email":"","middleInitial":"P.","affiliations":[{"id":12760,"text":"Tuttle and Associates","active":true,"usgs":false}],"preferred":false,"id":699396,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Al-Shukri, Hadar","contributorId":193245,"corporation":false,"usgs":false,"family":"Al-Shukri","given":"Hadar","affiliations":[],"preferred":false,"id":699397,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70176565,"text":"70176565 - 2016 - Ancient DNA reveals substantial genetic diversity in the California Condor (<i>Gymnogyps californianus</i>) prior to a population bottleneck","interactions":[],"lastModifiedDate":"2017-11-22T17:17:41","indexId":"70176565","displayToPublicDate":"2016-09-21T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3551,"text":"The Condor","active":true,"publicationSubtype":{"id":10}},"title":"Ancient DNA reveals substantial genetic diversity in the California Condor (<i>Gymnogyps californianus</i>) prior to a population bottleneck","docAbstract":"<p>Critically endangered species that have undergone severe population bottlenecks often have little remaining genetic variation, making it difficult to reconstruct population histories to apply in reintroduction and recovery strategies. By using ancient DNA techniques, it is possible to combine genetic evidence from the historical population with contemporary samples to provide a more complete picture of a species' genetic variation across its historical range and through time. Applying this approach, we examined changes in the mitochondrial DNA (mtDNA) control region (526 base pairs) of the endangered California Condor (<i><i>Gymnogyps californianus</i></i>). Results showed a &gt;80% reduction in unique haplotypes over the past 2 centuries. We found no spatial sorting of haplotypes in the historical population; the periphery of the range contained haplotypes that were common throughout the historical range. Direct examination of mtDNA from California Condor museum specimens provided a new window into historical population connectivity and genetic diversity showing: (1) a substantial loss of haplotypes, which is consistent with the hypothesis that condors were relatively abundant in the nineteenth century, but declined rapidly as a result of human-caused mortality; and (2) no evidence of historical population segregation, meaning that the available genetic data offer no cause to avoid releasing condors in unoccupied portions of their historical range.</p>","language":"English","publisher":"Cooper Ornithological Society","doi":"10.1650/CONDOR-16-35.1","usgsCitation":"D'Elia, J., Haig, S.M., Mullins, T.D., and Miller, M.P., 2016, Ancient DNA reveals substantial genetic diversity in the California Condor (<i>Gymnogyps californianus</i>) prior to a population bottleneck: The Condor, v. 118, no. 4, p. 703-714, https://doi.org/10.1650/CONDOR-16-35.1.","productDescription":"12 p.","startPage":"703","endPage":"714","ipdsId":"IP-061910","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":470559,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1650/condor-16-35.1","text":"Publisher Index Page"},{"id":328843,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"118","issue":"4","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c870","contributors":{"authors":[{"text":"D'Elia, Jesse","contributorId":63152,"corporation":false,"usgs":true,"family":"D'Elia","given":"Jesse","affiliations":[],"preferred":false,"id":649271,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Haig, Susan M. 0000-0002-6616-7589 susan_haig@usgs.gov","orcid":"https://orcid.org/0000-0002-6616-7589","contributorId":719,"corporation":false,"usgs":true,"family":"Haig","given":"Susan","email":"susan_haig@usgs.gov","middleInitial":"M.","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true},{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":649272,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Mullins, Thomas D. 0000-0001-8948-9604 tom_mullins@usgs.gov","orcid":"https://orcid.org/0000-0001-8948-9604","contributorId":3615,"corporation":false,"usgs":true,"family":"Mullins","given":"Thomas","email":"tom_mullins@usgs.gov","middleInitial":"D.","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true}],"preferred":false,"id":649273,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Miller, Mark P. 0000-0003-1045-1772 mpmiller@usgs.gov","orcid":"https://orcid.org/0000-0003-1045-1772","contributorId":1967,"corporation":false,"usgs":true,"family":"Miller","given":"Mark","email":"mpmiller@usgs.gov","middleInitial":"P.","affiliations":[{"id":38131,"text":"WMA - Office of Planning and Programming","active":true,"usgs":true}],"preferred":true,"id":649274,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70176573,"text":"70176573 - 2016 - A phylogenetic perspective on diversity of Galatheoidea (<i>Munida, Munidopsis</i>) from cold-water coral and cold seep communities in the western North Atlantic Ocean","interactions":[],"lastModifiedDate":"2017-04-04T08:26:38","indexId":"70176573","displayToPublicDate":"2016-09-21T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1371,"text":"Deep-Sea Research Part II: Topical Studies in Oceanography","active":true,"publicationSubtype":{"id":10}},"title":"A phylogenetic perspective on diversity of Galatheoidea (<i>Munida, Munidopsis</i>) from cold-water coral and cold seep communities in the western North Atlantic Ocean","docAbstract":"<p>Squat lobsters (Galatheoidea and Chirostyloidea), a diverse group of decapod crustaceans, are ubiquitous members of the deep-sea fauna. Within Galatheoidea, the genera <i>Munida</i> and <i>Munidopsis</i> are the most diverse, but accurate estimates of biodiversity are difficult due to morphological complexity and cryptic diversity. Four species of <i>Munida</i> and nine species of <i>Munidopsis</i> from cold-water coral (CWC) and cold seep communities in the northwestern Atlantic Ocean (NWA) and the Gulf of Mexico (GOM) were collected over eleven years and fifteen research cruises in order to assess faunal associations and estimate squat lobster biodiversity. Identification of the majority of specimens was determined morphologically. Mitochondrial COI sequence data, obtained from material collected during these research cruises, was supplemented with published sequences of congeners from other regions. The phylogenetic analysis of <i>Munida</i> supports three of the four NWA and GOM species (<i>M. microphthalma</i>, <i>M. sanctipauli</i>, and <i>M. valida</i>) as closely related taxa. The fourth species, <i>Munida iris</i>, is basal to most other species of <i>Munida</i>, and is closely related to <i>M. rutllanti,</i> a species found in the northeastern Atlantic Ocean (NEA). The majority of the nine species of <i>Munidopsis</i> included in our analyses were collected from chemosynthetic cold seep sites from the GOM. While seep taxa were scattered throughout the phylogenetic tree, four of these species (<i>Munidopsis livida</i>, <i>M. similis, M. bermudezi</i>, and <i>M. species A</i>) from the NWA and the GOM were part of a large eighteen-species clade that included species collected from Pacific Ocean chemosynthetic habitats, such as hydrothermal vents and whale falls. <i>Shinkaia crosnieri</i> was the sister taxon to the chemosynthetic clade, and <i>M. livida</i> was the most basal member of this clade. <i>Munidopsis sp. B</i>, an undescribed species with representative individuals collected from two GOM chemosynthetic sites, exhibited the largest genetic distance from other northern Atlantic species. Generally, intraspecific diversity was lower and patterns of haplotype diversity more simple in species of <i>Munidopsis</i> relative to <i>Munida</i>. This study puts two genera of NWA and GOM squat lobsters into a population genetic and phylogenetic context with regard to biogeography and habitat to enhance understanding of the history and evolutionary trajectories of these morphologically and ecologically diverse groups.</p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.dsr2.2016.08.014","usgsCitation":"Coykendall, D.K., Nizinski, M.S., and Morrison, C.L., 2016, A phylogenetic perspective on diversity of Galatheoidea (<i>Munida, Munidopsis</i>) from cold-water coral and cold seep communities in the western North Atlantic Ocean: Deep-Sea Research Part II: Topical Studies in Oceanography, v. 137, p. 258-272, https://doi.org/10.1016/j.dsr2.2016.08.014.","productDescription":"15 p.","startPage":"258","endPage":"272","ipdsId":"IP-073301","costCenters":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"links":[{"id":470560,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.dsr2.2016.08.014","text":"Publisher Index Page"},{"id":328826,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"otherGeospatial":"Atlantic Ocean","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -66.181640625,\n              43.58039085560784\n            ],\n            [\n              -64.3359375,\n              42.35854391749705\n            ],\n            [\n              -64.072265625,\n              41.244772343082076\n            ],\n            [\n              -65.478515625,\n              39.027718840211605\n            ],\n            [\n              -67.8515625,\n              37.09023980307208\n            ],\n            [\n              -70.927734375,\n              31.57853542647338\n            ],\n            [\n              -74.1796875,\n              28.536274512989916\n            ],\n            [\n              -78.662109375,\n              25.878994400196202\n            ],\n            [\n              -80.33203125,\n              24.367113562651262\n            ],\n            [\n              -85.341796875,\n              24.206889622398023\n            ],\n            [\n              -89.56054687499999,\n              23.885837699862005\n            ],\n            [\n              -94.130859375,\n              24.046463999666567\n            ],\n            [\n              -95.80078125,\n              25.24469595130604\n            ],\n            [\n              -97.470703125,\n              26.27371402440643\n            ],\n            [\n              -97.998046875,\n              27.68352808378776\n            ],\n            [\n              -96.591796875,\n              29.99300228455108\n            ],\n            [\n              -93.33984375,\n              31.80289258670676\n            ],\n            [\n              -88.681640625,\n              31.80289258670676\n            ],\n            [\n              -84.111328125,\n              32.24997445586331\n            ],\n            [\n              -80.33203125,\n              33.7243396617476\n            ],\n            [\n              -78.486328125,\n              35.02999636902566\n            ],\n            [\n              -77.431640625,\n              36.38591277287651\n            ],\n            [\n              -75.849609375,\n              38.95940879245423\n            ],\n            [\n              -74.70703125,\n              40.84706035607122\n            ],\n            [\n              -72.94921875,\n              42.22851735620852\n            ],\n            [\n              -70.48828125,\n              43.389081939117496\n            ],\n            [\n              -68.994140625,\n              43.58039085560784\n            ],\n            [\n              -66.181640625,\n              43.58039085560784\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"137","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c86e","contributors":{"authors":[{"text":"Coykendall, D. Katharine 0000-0002-1148-2397 dcoykendall@usgs.gov","orcid":"https://orcid.org/0000-0002-1148-2397","contributorId":5472,"corporation":false,"usgs":true,"family":"Coykendall","given":"D.","email":"dcoykendall@usgs.gov","middleInitial":"Katharine","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":649227,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Nizinski, Martha S.","contributorId":174770,"corporation":false,"usgs":false,"family":"Nizinski","given":"Martha","email":"","middleInitial":"S.","affiliations":[{"id":27510,"text":"NMFS National Systematics Laboratory, Smithsonian Institution","active":true,"usgs":false}],"preferred":false,"id":649229,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Morrison, Cheryl L. 0000-0001-9425-691X cmorrison@usgs.gov","orcid":"https://orcid.org/0000-0001-9425-691X","contributorId":146488,"corporation":false,"usgs":true,"family":"Morrison","given":"Cheryl","email":"cmorrison@usgs.gov","middleInitial":"L.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":649228,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70176561,"text":"70176561 - 2016 - Infectivity of attenuated poxvirus vaccine vectors and immunogenicity of a raccoonpox vectored rabies vaccine in the Brazilian Free-tailed bat (<i>Tadarida brasiliensis</i>)","interactions":[],"lastModifiedDate":"2016-10-07T12:37:49","indexId":"70176561","displayToPublicDate":"2016-09-21T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3673,"text":"Vaccine","active":true,"publicationSubtype":{"id":10}},"title":"Infectivity of attenuated poxvirus vaccine vectors and immunogenicity of a raccoonpox vectored rabies vaccine in the Brazilian Free-tailed bat (<i>Tadarida brasiliensis</i>)","docAbstract":"<p>Bats (Order Chiroptera) are an abundant group of mammals with tremendous ecological value as insectivores and plant dispersers, but their role as reservoirs of zoonotic diseases has received more attention in the last decade. With the goal of managing disease in free-ranging bats, we tested modified vaccinia Ankara (MVA) and raccoon poxvirus (RCN) as potential vaccine vectors in the Brazilian Free-tailed bat (<i>Tadarida brasiliensis</i>), using biophotonic <i>in vivo</i> imaging and immunogenicity studies. Animals were administered recombinant poxviral vectors expressing the luciferase gene (MVA-<i>luc</i>, RCN-<i>luc</i>) through oronasal (ON) or intramuscular (IM) routes and subsequently monitored for bioluminescent signal indicative of viral infection. No clinical illness was noted after exposure to any of the vectors, and limited luciferase expression was observed. Higher and longer levels of expression were observed with the RCN-<i>luc</i> construct. When given IM, luciferase expression was limited to the site of injection, while ON exposure led to initial expression in the oral cavity, often followed by secondary replication at another location, likely the gastric mucosa or gastric associated lymphatic tissue. Viral DNA was detected in oral swabs up to 7 and 9 days post infection (dpi) for MVA and RCN, respectively. While no live virus was detected in oral swabs from MVA-infected bats, titers up to 3.88 x 10<sup>4</sup> PFU/ml were recovered from oral swabs of RCN-infected bats. Viral DNA was also detected in fecal samples from two bats inoculated IM with RCN, but no live virus was recovered. Finally, we examined the immunogenicity of a RCN based rabies vaccine (RCN-G) following ON administration. Significant rabies neutralizing antibody titers were detected in the serum of immunized bats using the rapid fluorescence focus inhibition test (RFFIT). These studies highlight the safety and immunogenicity of attenuated poxviruses and their potential use as vaccine vectors in bats.</p>","language":"English","publisher":"Elsevier Ltd.","doi":"10.1016/j.vaccine.2016.08.088","usgsCitation":"Stading, B., Osorio, J., Velasco-Villa, A., Smotherman, M., Kingstad-Bakke, B., and Rocke, T.E., 2016, Infectivity of attenuated poxvirus vaccine vectors and immunogenicity of a raccoonpox vectored rabies vaccine in the Brazilian Free-tailed bat (<i>Tadarida brasiliensis</i>): Vaccine, v. 34, no. 44, p. 5352-5358, https://doi.org/10.1016/j.vaccine.2016.08.088.","productDescription":"7 p.","startPage":"5352","endPage":"5358","ipdsId":"IP-077071","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":470558,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"http://doi.org/10.1016/j.vaccine.2016.08.088","text":"Publisher Index Page"},{"id":328815,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"34","issue":"44","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c872","chorus":{"doi":"10.1016/j.vaccine.2016.08.088","url":"http://dx.doi.org/10.1016/j.vaccine.2016.08.088","publisher":"Elsevier BV","authors":"Stading Ben R., Osorio Jorge E., Velasco-Villa Andres, Smotherman Michael, Kingstad-Bakke Brock, Rocke Tonie E.","journalName":"Vaccine","publicationDate":"10/2016"},"contributors":{"authors":[{"text":"Stading, Benjamin bstading@usgs.gov","contributorId":174757,"corporation":false,"usgs":true,"family":"Stading","given":"Benjamin","email":"bstading@usgs.gov","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":649207,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Osorio, Jorge E.","contributorId":50392,"corporation":false,"usgs":false,"family":"Osorio","given":"Jorge E.","affiliations":[{"id":13052,"text":"Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin","active":true,"usgs":false}],"preferred":false,"id":649208,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Velasco-Villa, Andres","contributorId":174760,"corporation":false,"usgs":false,"family":"Velasco-Villa","given":"Andres","email":"","affiliations":[{"id":16974,"text":"US Centers for Disease Control and Prevention (CDC)","active":true,"usgs":false}],"preferred":false,"id":649209,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Smotherman, Michael","contributorId":174761,"corporation":false,"usgs":false,"family":"Smotherman","given":"Michael","email":"","affiliations":[{"id":6747,"text":"Texas A&M University","active":true,"usgs":false}],"preferred":false,"id":649210,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kingstad-Bakke, Brock","contributorId":174762,"corporation":false,"usgs":false,"family":"Kingstad-Bakke","given":"Brock","email":"","affiliations":[{"id":16925,"text":"University of Wisconsin-Madison","active":true,"usgs":false}],"preferred":false,"id":649211,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Rocke, Tonie E. 0000-0003-3933-1563 trocke@usgs.gov","orcid":"https://orcid.org/0000-0003-3933-1563","contributorId":2665,"corporation":false,"usgs":true,"family":"Rocke","given":"Tonie","email":"trocke@usgs.gov","middleInitial":"E.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":649212,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70176532,"text":"70176532 - 2016 - Freshwater polychaetes (<i>Manayunkia speciosa</i>) near the Detroit River, western Lake Erie: Abundance and life‐history characteristics","interactions":[],"lastModifiedDate":"2016-11-16T11:25:11","indexId":"70176532","displayToPublicDate":"2016-09-20T17:40:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2330,"text":"Journal of Great Lakes Research","active":true,"publicationSubtype":{"id":10}},"title":"Freshwater polychaetes (<i>Manayunkia speciosa</i>) near the Detroit River, western Lake Erie: Abundance and life‐history characteristics","docAbstract":"<p><span>Freshwater polychaetes are relatively rare and little-studied members of the benthos of lakes and rivers. We studied one polychaete species (</span><i>Manayunkia speciosa)</i><span> in Lake Erie near the mouth of the Detroit River. Abundances at one site were determined between 1961 and 2013 and life‐history characteristics at two sites were determined seasonally (March–November) in 2009–2010 and 2012–2013. Life‐history characteristics included abundances, length‐frequency distributions, presence/absence of constructed tubes, sexual maturity, and number and maturation of young of year (YOY) in tubes. Long-term abundances decreased in successive time periods between 1961 and 2003 (mean range&nbsp;=&nbsp;57,570 to 2583/m</span><sup>2</sup><span>) but few changes occurred between 2003 and 2013 (mean&nbsp;=&nbsp;5007/m</span><sup>2</sup><span>; range/y&nbsp;=&nbsp;2355–8216/m</span><sup>2</sup><span>). Seasonal abundances varied substantially between sites and years, but overall, abundances were low in March–April, high in May–August, and low in September–November. Although reproduction was continuous throughout warmer months, </span><i>en masse</i><span> recruitment, as revealed by length–frequency distributions, occurred in a brief period late‐June to mid-July, and possibly in early-September. All life history characteristics, including tube construction, were dependent on water temperatures (&gt;&nbsp;5&nbsp;°C in spring and &lt;&nbsp;15&nbsp;°C in fall). These results generally agree with and complement laboratory studies of </span><i>M. speciosa</i><span> in the Pacific Northwest where </span><i>M. speciosa</i><span> hosts parasites that cause substantial fish mortalities. Although abundance of</span><i>M. speciosa</i><span> near the mouth of the Detroit River was 33-fold lower in 2013 than it was in 1961, this population has persisted for five decades and, therefore, has the potential to harbor parasites that may cause fish mortalities in the Great Lakes.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jglr.2016.07.006","usgsCitation":"Schloesser, D.W., Malakauskas, D.M., and Malakauskas, S.J., 2016, Freshwater polychaetes (<i>Manayunkia speciosa</i>) near the Detroit River, western Lake Erie: Abundance and life‐history characteristics: Journal of Great Lakes Research, v. 42, no. 5, p. 1070-1083, https://doi.org/10.1016/j.jglr.2016.07.006.","productDescription":"14 p.","startPage":"1070","endPage":"1083","ipdsId":"IP-068959","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":328784,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Michigan","otherGeospatial":"Detroit River, Lake Erie","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -83.26812744140625,\n              41.96919079421467\n            ],\n            [\n              -83.26812744140625,\n              42.10739254393655\n            ],\n            [\n              -83.00308227539062,\n              42.10739254393655\n            ],\n            [\n              -83.00308227539062,\n              41.96919079421467\n            ],\n            [\n              -83.26812744140625,\n              41.96919079421467\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"42","issue":"5","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c874","contributors":{"authors":[{"text":"Schloesser, Donald W. dschloesser@usgs.gov","contributorId":3579,"corporation":false,"usgs":true,"family":"Schloesser","given":"Donald","email":"dschloesser@usgs.gov","middleInitial":"W.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":649130,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Malakauskas, David M.","contributorId":43247,"corporation":false,"usgs":true,"family":"Malakauskas","given":"David","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":649131,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Malakauskas, Sarah J.","contributorId":150991,"corporation":false,"usgs":false,"family":"Malakauskas","given":"Sarah","email":"","middleInitial":"J.","affiliations":[{"id":18158,"text":"Francis Marion Uinversity","active":true,"usgs":false}],"preferred":false,"id":649132,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70176534,"text":"70176534 - 2016 - Eurytemora carolleeae in the Laurentian Great Lakes revealed by phylogenetic and morphological analysis","interactions":[],"lastModifiedDate":"2021-08-25T14:48:38.912795","indexId":"70176534","displayToPublicDate":"2016-09-20T17:35:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2330,"text":"Journal of Great Lakes Research","active":true,"publicationSubtype":{"id":10}},"displayTitle":"<i>Eurytemora carolleeae</i> in the Laurentian Great Lakes revealed by phylogenetic and morphological analysis","title":"Eurytemora carolleeae in the Laurentian Great Lakes revealed by phylogenetic and morphological analysis","docAbstract":"<p><span>In the Laurentian Great Lakes, specimens of </span><i>Eurytemora</i><span> have been reported as</span><i>Eurytemora affinis</i><span> since its invasion in the late 1950s. During an intensive collection of aquatic invertebrates for morphological and molecular identification in Western Lake Erie in 2012-2013, several specimens of </span><i>Eurytemora</i><span> were collected. Analysis of these specimens identified them as the recently described species </span><i>Eurytemora carolleeae</i><span>Alekseev and Souissi 2011. This result led us to assess </span><i>E. carolleeae’s</i><span> identifying features, geographic distribution and historical presence in the Laurentian Great Lakes in view of its recent description in 2011. Cytochrome oxidase I (COI) DNA sequences of</span><i>Eurytemora</i><span> specimens were identified as closer (2 - 4% different) to recently described</span><i>E. carolleeae</i><span> than to most </span><i>E. affinis</i><span> sequences (14% different). </span><i>Eurytemora</i><span> from other areas of the Great Lakes and from North American rivers as far west as South Dakota (Missouri River) and east to Delaware (Christina River) also keyed to </span><i>E. carolleeae</i><span>. Morphological analysis of archival specimens from 1962 and from all the Great Lakes was identified as </span><i>E. carolleeae</i><span>. Additionally, </span><i>Eurytemora</i><span> drawings in previous publications were reassessed to determine if the species was </span><i>E. carolleeae</i><span> and are reported here. Additional morphological characters that may distinguish North American</span><i>E. carolleeae</i><span> from other taxa are also described. We conclude that </span><i>E. carolleeae</i><span> is the correct name for the species of </span><i>Eurytemora</i><span> that has inhabited the Great Lakes since its invasion, as established by both morphological and COI sequence comparisons to reference keys and sequence databases in present and archival specimens.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jglr.2016.04.001","usgsCitation":"Vasquez, A., Hudson, P.L., Fujimoto, M., Keeler, K.M., Dieter, P.M., and Ram, J.L., 2016, Eurytemora carolleeae in the Laurentian Great Lakes revealed by phylogenetic and morphological analysis: Journal of Great Lakes Research, v. 42, no. 4, p. 802-811, https://doi.org/10.1016/j.jglr.2016.04.001.","productDescription":"10 p.","startPage":"802","endPage":"811","ipdsId":"IP-071264","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":462077,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5047287","text":"External Repository"},{"id":328782,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada, United States","otherGeospatial":"Great Lakes","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -75.9814453125,\n              44.43377984606822\n            ],\n            [\n              -78.0029296875,\n              44.15068115978094\n            ],\n            [\n              -79.4970703125,\n              44.902577996288876\n            ],\n            [\n              -82.0458984375,\n              46.5286346952717\n            ],\n            [\n              -83.935546875,\n              46.37725420510028\n            ],\n            [\n  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Masanori","contributorId":151003,"corporation":false,"usgs":false,"family":"Fujimoto","given":"Masanori","email":"","affiliations":[{"id":7147,"text":"Wayne State University","active":true,"usgs":false}],"preferred":false,"id":649142,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Keeler, Kevin M. 0000-0002-8118-0060 kkeeler@usgs.gov","orcid":"https://orcid.org/0000-0002-8118-0060","contributorId":4377,"corporation":false,"usgs":true,"family":"Keeler","given":"Kevin","email":"kkeeler@usgs.gov","middleInitial":"M.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":649143,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dieter, Patricia M. 0000-0003-1686-2679 parmenio@usgs.gov","orcid":"https://orcid.org/0000-0003-1686-2679","contributorId":5289,"corporation":false,"usgs":true,"family":"Dieter","given":"Patricia","email":"parmenio@usgs.gov","middleInitial":"M.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":649144,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Ram, Jeffrey L.","contributorId":33659,"corporation":false,"usgs":true,"family":"Ram","given":"Jeffrey","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":649145,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70176533,"text":"70176533 - 2016 - A semelparous fish continues upstream migration when exposed to alarm cue, but adjusts movement speed and timing","interactions":[],"lastModifiedDate":"2016-09-20T16:38:05","indexId":"70176533","displayToPublicDate":"2016-09-20T17:35:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":770,"text":"Animal Behaviour","active":true,"publicationSubtype":{"id":10}},"title":"A semelparous fish continues upstream migration when exposed to alarm cue, but adjusts movement speed and timing","docAbstract":"<p><span>Animals make trade-offs between predation risk and pursuit of opportunities such as foraging and reproduction. Trade-offs between antipredator behaviours and foraging are well suited to manipulation in laboratory and field settings and have generated a vast compendium of knowledge. However, much less is known about how animals manage trade-offs between predation risk and pursuit of reproductive opportunities in the absence of the confounding effects of foraging. In the present study, we investigated how the nonfeeding migratory life stage of sea lamprey, </span><i>Petromyzon marinus</i><span>, responds to odour from dead conspecifics (a cue that induces avoidance behaviours in laboratory and field studies). We released groups of PIT-tagged sea lamprey 65&nbsp;m from the shore of Lake Michigan or 287&nbsp;m upstream in Carp Lake River and used antennas to detect their movements in the river. As the breeding season progressed, sea lamprey initiated upstream movement earlier and were more likely to enter the river. Sea lamprey that began the night in Lake Michigan entered Carp Lake River at higher rates and accelerated upstream when exposed to high concentrations of alarm cue, consistent with animals attempting to minimize time spent in risky areas. Sea lampreys that began the night in the river delayed upstream movement when exposed to alarm cue, consistent with animals sheltering and gathering information about a source of risk. We attribute this context-specific reaction to alarm cue to differences in perceived vulnerability to predation in sheltered positions in the river versus exposed positions in the lake. Once in the river, the vast majority of sea lamprey moved upstream independent of alarm cue or Julian date. Although life-history-induced time and energy budgets place rigid constraints on the direction of migration, sea lamprey attend to predation risk by modifying movement timing and speed.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.anbehav.2016.08.007","usgsCitation":"Luhring, T.M., Meckley, T., Johnson, N.S., Siefkes, M.J., Hume, J.B., and Wagner, C.M., 2016, A semelparous fish continues upstream migration when exposed to alarm cue, but adjusts movement speed and timing: Animal Behaviour, v. 121, p. 41-51, https://doi.org/10.1016/j.anbehav.2016.08.007.","productDescription":"11 p.","startPage":"41","endPage":"51","ipdsId":"IP-076381","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":328783,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"121","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c878","contributors":{"authors":[{"text":"Luhring, Thomas M","contributorId":150988,"corporation":false,"usgs":false,"family":"Luhring","given":"Thomas","email":"","middleInitial":"M","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":649146,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Meckley, Trevor D.","contributorId":67417,"corporation":false,"usgs":true,"family":"Meckley","given":"Trevor D.","affiliations":[],"preferred":false,"id":649147,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Johnson, Nicholas S. njohnson@usgs.gov","contributorId":145440,"corporation":false,"usgs":true,"family":"Johnson","given":"Nicholas","email":"njohnson@usgs.gov","middleInitial":"S.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":false,"id":649148,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Siefkes, Michael J.","contributorId":36905,"corporation":false,"usgs":true,"family":"Siefkes","given":"Michael","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":649149,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hume, John B.","contributorId":150987,"corporation":false,"usgs":false,"family":"Hume","given":"John","email":"","middleInitial":"B.","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":649150,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Wagner, C. Michael","contributorId":145442,"corporation":false,"usgs":false,"family":"Wagner","given":"C.","email":"","middleInitial":"Michael","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":649151,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70176535,"text":"70176535 - 2016 - White sucker <i>Catostomus commersonii</i> respond to conspecific and sea lamprey <i>Petromyzon marinus</i> alarm cues but not potential predator cues","interactions":[],"lastModifiedDate":"2016-09-20T16:32:30","indexId":"70176535","displayToPublicDate":"2016-09-20T17:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2330,"text":"Journal of Great Lakes Research","active":true,"publicationSubtype":{"id":10}},"title":"White sucker <i>Catostomus commersonii</i> respond to conspecific and sea lamprey <i>Petromyzon marinus</i> alarm cues but not potential predator cues","docAbstract":"<p><span>Recent studies proposed the use of chemosensory alarm cues to control the distribution of invasive sea lamprey </span><i>Petromyzon marinus</i><span> populations in the Laurentian Great Lakes and necessitate the evaluation of sea lamprey chemosensory alarm cues on valuable sympatric species such as white sucker. In two laboratory experiments, 10 replicate groups (10 animals each) of migratory white suckers were exposed to deionized water (control), conspecific whole-body extract, heterospecific whole-body extract (sea lamprey) and two potential predator cues (2-phenylethylamine HCl (PEA HCl) and human saliva) during the day, and exposed to the first four of the above cues at night. White suckers avoided the conspecific and the sea lamprey whole-body extract both during the day and at night to the same extent. Human saliva did not induce avoidance during the day. PEA HCl did not induce avoidance at a higher concentration during the day, or at night at the minimum concentration that was previously shown to induce maximum avoidance by sea lamprey under laboratory conditions. Our findings suggest that human saliva and PEA HCl may be potential species-specific predator cues for sea lamprey.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jglr.2016.04.003","usgsCitation":"Jordbro, E.J., Di Rocco, R.T., Imre, I., Johnson, N., and Brown, G.E., 2016, White sucker <i>Catostomus commersonii</i> respond to conspecific and sea lamprey <i>Petromyzon marinus</i> alarm cues but not potential predator cues: Journal of Great Lakes Research, v. 42, no. 4, p. 849-853, https://doi.org/10.1016/j.jglr.2016.04.003.","productDescription":"5 p.","startPage":"849","endPage":"853","ipdsId":"IP-072760","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":328781,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"42","issue":"4","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c87a","contributors":{"authors":[{"text":"Jordbro, Ethan J.","contributorId":174734,"corporation":false,"usgs":false,"family":"Jordbro","given":"Ethan","email":"","middleInitial":"J.","affiliations":[{"id":6585,"text":"Algoma University","active":true,"usgs":false}],"preferred":false,"id":649134,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Di Rocco, Richard T.","contributorId":150984,"corporation":false,"usgs":false,"family":"Di Rocco","given":"Richard","email":"","middleInitial":"T.","affiliations":[{"id":6586,"text":"Concordia University","active":true,"usgs":false}],"preferred":false,"id":649135,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Imre, Istvan","contributorId":150985,"corporation":false,"usgs":false,"family":"Imre","given":"Istvan","email":"","affiliations":[{"id":6585,"text":"Algoma University","active":true,"usgs":false}],"preferred":false,"id":649136,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Johnson, Nicholas S. 0000-0002-7419-6013 njohnson@usgs.gov","orcid":"https://orcid.org/0000-0002-7419-6013","contributorId":150983,"corporation":false,"usgs":true,"family":"Johnson","given":"Nicholas S.","email":"njohnson@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":649133,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Brown, Grant E.","contributorId":173005,"corporation":false,"usgs":false,"family":"Brown","given":"Grant","email":"","middleInitial":"E.","affiliations":[{"id":6586,"text":"Concordia University","active":true,"usgs":false}],"preferred":false,"id":649137,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70176523,"text":"70176523 - 2016 - Observations of nearshore groundwater discharge: Kahekili Beach Park submarine springs, Maui, Hawaii","interactions":[],"lastModifiedDate":"2025-05-13T16:46:33.72118","indexId":"70176523","displayToPublicDate":"2016-09-20T16:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3823,"text":"Journal of Hydrology: Regional Studies","active":true,"publicationSubtype":{"id":10}},"title":"Observations of nearshore groundwater discharge: Kahekili Beach Park submarine springs, Maui, Hawaii","docAbstract":"<h4 id=\"absSec_1\">Study region</h4><p id=\"spar0070\">The study region encompasses the nearshore, coastal waters off west Maui, Hawaii. Here abundant groundwater—that carries with it a strong land-based fingerprint—discharges into the coastal waters and over a coral reef.</p><h4 id=\"absSec_2\">Study focus</h4><p id=\"spar0075\">Coastal groundwater discharge is a ubiquitous hydrologic feature that has been shown to impact nearshore ecosystems and material budgets. A unique combined geochemical tracer and oceanographic time-series study addressed rates and oceanic forcings of submarine groundwater discharge at a submarine spring site off west Maui, Hawaii.</p><h4 id=\"absSec_3\">New hydrological insights for the region</h4><p id=\"spar0080\">Estimates of submarine groundwater discharge were derived for a primary vent site and surrounding coastal waters off west Maui, Hawaii using an excess <sup>222</sup>Rn (<i>t</i><sub>1/2</sub>&nbsp;=&nbsp;3.8&nbsp;d) mass balance model. Such estimates were complemented with a novel thoron (<sup>220</sup>Rn,<i>t</i><sub>1/2</sub>&nbsp;=&nbsp;56&nbsp;s) groundwater discharge tracer application, as well as oceanographic time series and thermal infrared imagery analyses. In combination, this suite of techniques provides new insight into the connectivity of the coastal aquifer with the near-shore ocean and examines the physical drivers of submarine groundwater discharge. Lastly, submarine groundwater discharge derived constituent concentrations were tabulated and compared to surrounding seawater concentrations. Such work has implications for the management of coastal aquifers and downstream nearshore ecosystems that respond to sustained constituent loadings via this submarine route.</p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.ejrh.2015.12.056","usgsCitation":"Swarzenski, P.W., Dulai, H., Kroeger, K., Smith, C.G., Dimova, N., Storlazzi, C., Prouty, N., Gingerich, S.B., and Glenn, C.R., 2016, Observations of nearshore groundwater discharge: Kahekili Beach Park submarine springs, Maui, Hawaii: Journal of Hydrology: Regional Studies, v. 11, p. 147-165, https://doi.org/10.1016/j.ejrh.2015.12.056.","productDescription":"19 p.","startPage":"147","endPage":"165","ipdsId":"IP-068143","costCenters":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":328777,"rank":2,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":470561,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.ejrh.2015.12.056","text":"Publisher Index Page"}],"country":"United States","state":"Hawaii","otherGeospatial":"Maui","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -156.69799804687497,\n              20.92604896920106\n            ],\n            [\n              -156.69799804687497,\n              20.94685150573486\n            ],\n            [\n              -156.6826343536377,\n              20.94685150573486\n            ],\n            [\n              -156.6826343536377,\n              20.92604896920106\n            ],\n            [\n              -156.69799804687497,\n              20.92604896920106\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"11","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c87c","contributors":{"authors":[{"text":"Swarzenski, Peter W. 0000-0003-0116-0578 pswarzen@usgs.gov","orcid":"https://orcid.org/0000-0003-0116-0578","contributorId":1070,"corporation":false,"usgs":true,"family":"Swarzenski","given":"Peter","email":"pswarzen@usgs.gov","middleInitial":"W.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":649120,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dulai, H.","contributorId":174725,"corporation":false,"usgs":false,"family":"Dulai","given":"H.","email":"","affiliations":[],"preferred":false,"id":649121,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kroeger, K.D.","contributorId":26060,"corporation":false,"usgs":true,"family":"Kroeger","given":"K.D.","email":"","affiliations":[],"preferred":false,"id":649122,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Smith, Christopher G. 0000-0002-8075-4763 cgsmith@usgs.gov","orcid":"https://orcid.org/0000-0002-8075-4763","contributorId":3410,"corporation":false,"usgs":true,"family":"Smith","given":"Christopher","email":"cgsmith@usgs.gov","middleInitial":"G.","affiliations":[{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true},{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true},{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":649123,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dimova, N.","contributorId":66051,"corporation":false,"usgs":true,"family":"Dimova","given":"N.","affiliations":[],"preferred":false,"id":649124,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Storlazzi, C. 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,{"id":70176515,"text":"70176515 - 2016 - The persistence and characteristics of Chinook salmon migrations to the Upper Klamath River prior to exclusion by dams","interactions":[],"lastModifiedDate":"2016-09-20T11:03:31","indexId":"70176515","displayToPublicDate":"2016-09-20T12:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2957,"text":"Oregon Historical Society Quarterly","active":true,"publicationSubtype":{"id":10}},"title":"The persistence and characteristics of Chinook salmon migrations to the Upper Klamath River prior to exclusion by dams","docAbstract":"In this research article, John Hamilton and his co-authors present extensive new research and information gathered since a 2005 publication on the historical evidence of anadromomous fish distribution in the Upper Klamath River watershed. Using historical accounts from early explorers and ethnographers to early-twentieth-century photographs, newspaper accounts, and government reports, the authors provide a more complete record of past salmon migrations. The updated record “substantiate[s] the historical persistence of salmon, their migration characteristics, and the broad population baseline that will be key to future commercial, recreational, and Tribal fisheries in the Klamath River and beyond.” During a time when salmon restoration plans are being considered in the region, the historical record can serve as guidance to once again establish diverse and thriving populations.","language":"English","publisher":"The Oregon Historical Society","usgsCitation":"Hamilton, J.B., Rondorf, D.W., Tinniswood, W., Leary, R.J., Mayer, T., Gavette, C., and Casal, L.A., 2016, The persistence and characteristics of Chinook salmon migrations to the Upper Klamath River prior to exclusion by dams: Oregon Historical Society Quarterly, v. 117, no. 3, p. 326-377.","productDescription":"52 p.","startPage":"326","endPage":"377","ipdsId":"IP-059293","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":328754,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":328749,"type":{"id":15,"text":"Index Page"},"url":"https://www.ohs.org/research-and-library/oregon-historical-quarterly/"}],"country":"United States","state":"California, Oregon","otherGeospatial":"Klamath Upper River, Link River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.51953124999999,\n              41.74262728637672\n            ],\n            [\n              -122.51953124999999,\n              43.02071359427862\n            ],\n            [\n              -120.88256835937499,\n              43.02071359427862\n            ],\n            [\n              -120.88256835937499,\n              41.74262728637672\n            ],\n            [\n              -122.51953124999999,\n              41.74262728637672\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"117","issue":"3","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57f7c63de4b0bc0bec09c880","contributors":{"authors":[{"text":"Hamilton, John B","contributorId":174701,"corporation":false,"usgs":false,"family":"Hamilton","given":"John","email":"","middleInitial":"B","affiliations":[{"id":27499,"text":"U.S. Fish and Wildlife Service, Yreka Fish and Wildlife Office 1829 S. Oregon St., Yreka, CA  96097","active":true,"usgs":false}],"preferred":false,"id":649052,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rondorf, Dennis W. drondorf@usgs.gov","contributorId":2970,"corporation":false,"usgs":true,"family":"Rondorf","given":"Dennis","email":"drondorf@usgs.gov","middleInitial":"W.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":649051,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Tinniswood, William","contributorId":174703,"corporation":false,"usgs":false,"family":"Tinniswood","given":"William","email":"","affiliations":[{"id":27501,"text":"Fish Biologist, Oregon Department of Fish and Wildlife, 1850 Miller Island Road, Klamath Falls, OR  97603","active":true,"usgs":false}],"preferred":false,"id":649054,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Leary, Ryan J","contributorId":174702,"corporation":false,"usgs":false,"family":"Leary","given":"Ryan","email":"","middleInitial":"J","affiliations":[{"id":27500,"text":"Fisheries Biologist, The Klamath Tribes, 5671 Sprague River Road, Chiloquin, OR 97624","active":true,"usgs":false}],"preferred":false,"id":649053,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Mayer, Tim","contributorId":174705,"corporation":false,"usgs":false,"family":"Mayer","given":"Tim","email":"","affiliations":[{"id":27503,"text":"Supervisory Hydrologist, Water Resources Branch, U.S. Fish and Wildlife Service, 911 NE 11th Ave., Portland, OR  97232-4181","active":true,"usgs":false}],"preferred":false,"id":649056,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Gavette, Charleen","contributorId":174706,"corporation":false,"usgs":false,"family":"Gavette","given":"Charleen","email":"","affiliations":[{"id":27504,"text":"Geographer/GIS Coordinator, NMFS, 777 Sonoma Ave., Suite 325, Santa Rosa, CA 95405","active":true,"usgs":false}],"preferred":false,"id":649057,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Casal, Lynne A. lcasal@usgs.gov","contributorId":5166,"corporation":false,"usgs":true,"family":"Casal","given":"Lynne","email":"lcasal@usgs.gov","middleInitial":"A.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":649058,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70176512,"text":"70176512 - 2016 - Learning and adaptation in waterfowl conservation: By chance or by design?","interactions":[],"lastModifiedDate":"2016-09-28T16:00:27","indexId":"70176512","displayToPublicDate":"2016-09-20T12:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3779,"text":"Wildlife Society Bulletin","onlineIssn":"1938-5463","printIssn":"0091-7648","active":true,"publicationSubtype":{"id":10}},"title":"Learning and adaptation in waterfowl conservation: By chance or by design?","docAbstract":"<p><span>The most recent revision of the North American Waterfowl Management Plan seeks to increase the adaptive capacity of the management enterprise to cope with accelerating changes in climate, land-use patterns, agency priorities, and the waterfowl and wetlands constituency. Institutional and cultural changes of the magnitude envisioned are necessarily slow, messy processes, involving many actors who at a minimum must agree on the need for change. Waterfowl conservation now finds itself in the transition zone between business as usual and some new mode of operation. There are at least 2 different perspectives of this transition: one focuses on process, accountability, and planning for change; another focuses on solutions generated from an organic process of creativity, information sharing, and risk-taking. Both of these views have something to contribute, but some in the wildlife management enterprise may tend to focus more on the first view. We suggest that ideas from panarchy theory, especially those related to the behaviors of complex adaptive systems, can help waterfowl managers better understand and foster the institutional changes they seek.</span></p>","language":"English","publisher":"Wiley","doi":"10.1002/wsb.682","usgsCitation":"Johnson, F.A., Case, D.J., and Humburg, D.H., 2016, Learning and adaptation in waterfowl conservation: By chance or by design?: Wildlife Society Bulletin, v. 40, no. 3, p. 423-427, https://doi.org/10.1002/wsb.682.","productDescription":"5 p.","startPage":"423","endPage":"427","ipdsId":"IP-075263","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":498971,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/wsb.682","text":"Publisher Index Page"},{"id":328755,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"40","issue":"3","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2016-08-29","publicationStatus":"PW","scienceBaseUri":"57ed5309e4b090825011d501","contributors":{"authors":[{"text":"Johnson, Fred A. 0000-0002-5854-3695 fjohnson@usgs.gov","orcid":"https://orcid.org/0000-0002-5854-3695","contributorId":2773,"corporation":false,"usgs":true,"family":"Johnson","given":"Fred","email":"fjohnson@usgs.gov","middleInitial":"A.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":649038,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Case, David J.","contributorId":140653,"corporation":false,"usgs":false,"family":"Case","given":"David","email":"","middleInitial":"J.","affiliations":[{"id":13543,"text":"DJ Case & Associates","active":true,"usgs":false}],"preferred":false,"id":649039,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Humburg, Dale H.","contributorId":174698,"corporation":false,"usgs":false,"family":"Humburg","given":"Dale","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":649040,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
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