{"pageNumber":"1111","pageRowStart":"27750","pageSize":"25","recordCount":184769,"records":[{"id":70173868,"text":"70173868 - 2016 - Impacts of Northern Pike on stocked Rainbow Trout in Pactola Reservoir, South Dakota","interactions":[],"lastModifiedDate":"2016-06-15T15:24:47","indexId":"70173868","displayToPublicDate":"2016-06-15T16:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"Impacts of Northern Pike on stocked Rainbow Trout in Pactola Reservoir, South Dakota","docAbstract":"<p><span>Establishment of nonnative Northern Pike&nbsp;</span><i>Esox lucius</i><span>&nbsp;in Pactola Reservoir, South Dakota, has prompted concern among biologists about the influence of this species on the lake&rsquo;s intensively managed salmonid fisheries. Ancedotal information suggests that catch rates of Rainbow Trout&nbsp;</span><i>Oncorhynchus mykiss</i><span>&nbsp;have declined while mean size and abundance of Northern Pike has increased, although quantitative information on diet and growth of the Northern Pike population is lacking. To address potential interactions between Northern Pike and Rainbow Trout, we assessed size-dependent predation by Northern Pike on Rainbow Trout and determined the relative energetic contribution of stocked Rainbow Trout to Northern Pike growth using bioenergetics modeling. Stable isotopes combined with traditional diet analyses revealed that smaller Northern Pike (&lt;600 mm TL) consumed primarily centrarchids and Rainbow Smelt&nbsp;</span><i>Osmerus mordax</i><span>, and Rainbow Trout contributed less than 10% to their annual energy consumption. In contrast, larger Northern Pike (&ge;600 mm TL) consumed primarily Rainbow Trout, which accounted for 56% of their annual energy consumption. Combining estimates of Northern Pike predation with production costs of catchable-size Rainbow Trout revealed that annual economic losses ranged from US$15,259 to $24,801 per year. Over its lifespan, an age-10 Northern Pike was estimated to consume ~117 Rainbow Trout worth approximately $340. Thus, Northern Pike predation substantially influences salmonid management initiatives and is likely a primary factor contributing to reduced Rainbow Trout abundance and return to anglers in Pactola Reservoir. Strategies for reducing Northern Pike predation on Rainbow Trout include increasing the size of stocked fish or altering the timing and spatial distribution of stocking events.</span></p>","language":"English","publisher":"American Fisheries Society","doi":"10.1080/02755947.2015.1116472","usgsCitation":"Scheibel, N.C., Dembkowski, D., Davis, J.L., and Chipps, S.R., 2016, Impacts of Northern Pike on stocked Rainbow Trout in Pactola Reservoir, South Dakota: North American Journal of Fisheries Management, v. 36, no. 2, p. 230-240, https://doi.org/10.1080/02755947.2015.1116472.","productDescription":"11 p.","startPage":"230","endPage":"240","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-064502","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":323714,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"South Dakota","otherGeospatial":"Pactola Reservoir","volume":"36","issue":"2","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2016-03-08","publicationStatus":"PW","scienceBaseUri":"57626e20e4b07657d199cd92","contributors":{"authors":[{"text":"Scheibel, Natalie C.","contributorId":171928,"corporation":false,"usgs":false,"family":"Scheibel","given":"Natalie","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":639132,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dembkowski, Daniel J.","contributorId":78237,"corporation":false,"usgs":true,"family":"Dembkowski","given":"Daniel J.","affiliations":[],"preferred":false,"id":639133,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Davis, Jacob L.","contributorId":171929,"corporation":false,"usgs":false,"family":"Davis","given":"Jacob","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":639134,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Chipps, Steven R. 0000-0001-6511-7582 steve_chipps@usgs.gov","orcid":"https://orcid.org/0000-0001-6511-7582","contributorId":2243,"corporation":false,"usgs":true,"family":"Chipps","given":"Steven","email":"steve_chipps@usgs.gov","middleInitial":"R.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":638863,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70139712,"text":"70139712 - 2016 - Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts","interactions":[],"lastModifiedDate":"2016-06-15T15:56:40","indexId":"70139712","displayToPublicDate":"2016-06-15T16:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1471,"text":"Ecology of Freshwater Fish","active":true,"publicationSubtype":{"id":10}},"title":"Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts","docAbstract":"<p><span>Coastal Brook Trout (</span><i>Salvelinus fontinalis</i><span>) populations are found from northern Canada to New England. The extent of anadromy generally decreases with latitude, but the ecology and movements of more southern populations are poorly understood. We conducted a 33-month acoustic telemetry study of Brook Trout in Red Brook, MA, and adjacent Buttermilk Bay (marine system) using 16 fixed acoustic receivers and surgically implanting acoustic transmitters in 84 individuals. Tagged Brook Trout used the stream, estuary (50% of individuals) and bay (10% of individuals). Movements into full sea water were brief when occurring. GAMM models revealed that transitions between habitat areas occurred most often in spring and fall. Environmental data suggest that use of the saline environment is limited by summer temperatures in the bay. Movements may also be related to moon phase. Compared to more northern coastal populations of Brook Trout, the Red Brook population appears to be less anadromous overall, yet the estuarine segment of the system may have considerable ecological importance as a food resource.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/eff.12216","usgsCitation":"Snook, E., Letcher, B., Dubreuil, T.L., Zydlewski, J.D., O'Donnell, M., Whiteley, A.R., Hurley, S.T., and Danylchuk, A.J., 2016, Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts: Ecology of Freshwater Fish, v. 25, no. 3, p. 360-375, https://doi.org/10.1111/eff.12216.","productDescription":"16 p.","startPage":"360","endPage":"375","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-056464","costCenters":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"links":[{"id":488240,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.7275/4727460","text":"External Repository"},{"id":323720,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"25","issue":"3","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2015-03-06","publicationStatus":"PW","scienceBaseUri":"5524ffafe4b027f0aee3d47b","contributors":{"authors":[{"text":"Snook, Erin L.","contributorId":138978,"corporation":false,"usgs":false,"family":"Snook","given":"Erin L.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":539566,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Letcher, Benjamin H. 0000-0003-0191-5678 bletcher@usgs.gov","orcid":"https://orcid.org/0000-0003-0191-5678","contributorId":2864,"corporation":false,"usgs":true,"family":"Letcher","given":"Benjamin H.","email":"bletcher@usgs.gov","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":539565,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Dubreuil, Todd L. 0000-0003-0189-4336 tdubreuil@usgs.gov","orcid":"https://orcid.org/0000-0003-0189-4336","contributorId":5552,"corporation":false,"usgs":true,"family":"Dubreuil","given":"Todd","email":"tdubreuil@usgs.gov","middleInitial":"L.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":539567,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Zydlewski, Joseph D. 0000-0002-2255-2303 jzydlewski@usgs.gov","orcid":"https://orcid.org/0000-0002-2255-2303","contributorId":2004,"corporation":false,"usgs":true,"family":"Zydlewski","given":"Joseph","email":"jzydlewski@usgs.gov","middleInitial":"D.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true},{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":539568,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"O'Donnell, Matthew J. 0000-0002-9089-2377 mjodonnell@usgs.gov","orcid":"https://orcid.org/0000-0002-9089-2377","contributorId":138979,"corporation":false,"usgs":true,"family":"O'Donnell","given":"Matthew J.","email":"mjodonnell@usgs.gov","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":539569,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Whiteley, Andrew R.","contributorId":52072,"corporation":false,"usgs":false,"family":"Whiteley","given":"Andrew","email":"","middleInitial":"R.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":539570,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hurley, Stephen T.","contributorId":138980,"corporation":false,"usgs":false,"family":"Hurley","given":"Stephen","email":"","middleInitial":"T.","affiliations":[{"id":12605,"text":"Mass Fish and Wildlife","active":true,"usgs":false}],"preferred":false,"id":539571,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Danylchuk, Andy J.","contributorId":138981,"corporation":false,"usgs":false,"family":"Danylchuk","given":"Andy","email":"","middleInitial":"J.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":539572,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70173915,"text":"70173915 - 2016 - A new genus and species of blind sleeper (Teleostei: Eleotridae) from Oaxaca, Mexico: First obligate cave gobiiform in the Western Hemisphere","interactions":[],"lastModifiedDate":"2016-06-22T12:04:33","indexId":"70173915","displayToPublicDate":"2016-06-15T15:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1337,"text":"Copeia","active":true,"publicationSubtype":{"id":10}},"title":"A new genus and species of blind sleeper (Teleostei: Eleotridae) from Oaxaca, Mexico: First obligate cave gobiiform in the Western Hemisphere","docAbstract":"<p><i>Caecieleotris morrisi</i><span>, new genus and species of sleeper (family Eleotridae), is described from a submerged freshwater cave in a karst region of the northern portion of the State of Oaxaca, Mexico, R&iacute;o Papaloapan drainage, Gulf of Mexico basin. The new species represents the first cave-adapted sleeper known from the Western Hemisphere and is one of only 13 stygobitic gobiiforms known worldwide, with all others limited in distribution to the Indo-Pacific region. The new taxon represents a third independent evolution of a hypogean lifestyle in sleepers, the others being two species of</span><i>Oxyeleotris</i><span>&nbsp;(</span><i>O</i><span>.&nbsp;</span><i>caeca</i><span>&nbsp;and&nbsp;</span><i>O</i><span>.&nbsp;</span><i>colasi</i><span>) from New Guinea and a single species,&nbsp;</span><i>Bostrychus microphthalmus</i><span>, from Sulawesi.&nbsp;</span><i>Caecieleotris morrisi</i><span>, new species, is distinguished from epigean eleotrids of the Western Atlantic in lacking functional eyes and body pigmentation, as well as having other troglomorphic features. It shares convergent aspects of morphology with cave-dwelling species of&nbsp;</span><i>Oxyeleotris</i><span>&nbsp;and&nbsp;</span><i>B</i><span>.&nbsp;</span><i>microphthalmus</i><span>&nbsp;but differs from those taxa in lacking cephalic pores and head squamation, among other characters. Description of&nbsp;</span><i>C</i><span>.&nbsp;</span><i>morrisi,</i><span>&nbsp;new species, brings the total number of eleotrid species known from Mexico to 12. Seven of these, including the new species, occur on the Atlantic Slope.</span></p>","language":"English","publisher":"The American Society of Ichthyologists and Herpetologists","doi":"10.1643/CI-15-275","usgsCitation":"Walsh, S.J., and Chakrabarty, P., 2016, A new genus and species of blind sleeper (Teleostei: Eleotridae) from Oaxaca, Mexico: First obligate cave gobiiform in the Western Hemisphere: Copeia, v. 104, no. 2, p. 506-517, https://doi.org/10.1643/CI-15-275.","productDescription":"12 p.","startPage":"506","endPage":"517","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-064711","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":488507,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"http://publication.plazi.org/id/FFB2FFEDEF2FFF9279202262D23DFFD2","text":"External Repository"},{"id":323704,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"104","issue":"2","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1be4b07657d199cd55","contributors":{"authors":[{"text":"Walsh, Stephen J. 0000-0002-1009-8537 swalsh@usgs.gov","orcid":"https://orcid.org/0000-0002-1009-8537","contributorId":1456,"corporation":false,"usgs":true,"family":"Walsh","given":"Stephen","email":"swalsh@usgs.gov","middleInitial":"J.","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":639090,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Chakrabarty, Prosanta","contributorId":171917,"corporation":false,"usgs":false,"family":"Chakrabarty","given":"Prosanta","email":"","affiliations":[{"id":16756,"text":"Louisiana State University, Baton Rouge, LA","active":true,"usgs":false}],"preferred":false,"id":639091,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70173913,"text":"70173913 - 2016 - Head-started Kemp’s ridley turtle (<i>Lepidochelys kempii</i>) nest recorded in Florida: Possible implications","interactions":[],"lastModifiedDate":"2016-06-15T13:55:17","indexId":"70173913","displayToPublicDate":"2016-06-15T14:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1210,"text":"Chelonian Conservation and Biology","active":true,"publicationSubtype":{"id":10}},"title":"Head-started Kemp’s ridley turtle (<i>Lepidochelys kempii</i>) nest recorded in Florida: Possible implications","docAbstract":"<p>A head-started Kemp&rsquo;s ridley sea turtle (Lepidochelys kempii) was documented nesting on South Walton Beach, Florida on 25 May 2015. This record supports the possibility that exposure to Florida waters after being held in captivity through 1&ndash;3 yrs of age during the head-starting process may have influenced future nest site selection of this and perhaps other Kemp&rsquo;s ridley turtles. Such findings could have important ramifications for marine water experimentation and release site selection for turtles that have been reared in captivity.</p>","language":"English","publisher":"Chelonian Research Foundation","doi":"10.2744/CCB-1192.1","usgsCitation":"Shaver, D.J., Lamont, M.M., Maxwell, S., Walker, J.S., and Dillingham, T., 2016, Head-started Kemp’s ridley turtle (<i>Lepidochelys kempii</i>) nest recorded in Florida: Possible implications: Chelonian Conservation and Biology, v. 15, no. 1, p. 138-143, https://doi.org/10.2744/CCB-1192.1.","productDescription":"6 p.","startPage":"138","endPage":"143","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-069636","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":470880,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.2744/ccb-1192.1","text":"Publisher Index Page"},{"id":323699,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Florida","city":"Panama City, South Walton Beach","volume":"15","issue":"1","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1fe4b07657d199cd78","contributors":{"authors":[{"text":"Shaver, Donna J.","contributorId":11104,"corporation":false,"usgs":true,"family":"Shaver","given":"Donna","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":639060,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lamont, Margaret M. 0000-0001-7520-6669 mlamont@usgs.gov","orcid":"https://orcid.org/0000-0001-7520-6669","contributorId":4525,"corporation":false,"usgs":true,"family":"Lamont","given":"Margaret","email":"mlamont@usgs.gov","middleInitial":"M.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":639059,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Maxwell, Sharon","contributorId":171904,"corporation":false,"usgs":false,"family":"Maxwell","given":"Sharon","email":"","affiliations":[{"id":26966,"text":"South Walton Turtle Watch Group","active":true,"usgs":false}],"preferred":false,"id":639061,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Walker, Jennifer Shelby","contributorId":171905,"corporation":false,"usgs":false,"family":"Walker","given":"Jennifer","email":"","middleInitial":"Shelby","affiliations":[{"id":5106,"text":"National Park Service, Yellowstone National Park, Mammoth, Wyoming 82190","active":true,"usgs":false}],"preferred":false,"id":639062,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dillingham, Ted","contributorId":171906,"corporation":false,"usgs":false,"family":"Dillingham","given":"Ted","email":"","affiliations":[{"id":590,"text":"U.S. Army Corps of Engineers","active":false,"usgs":false}],"preferred":false,"id":639063,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70173936,"text":"70173936 - 2016 - Historical baselines and the future of shell calcification for a foundation species in a changing ocean","interactions":[],"lastModifiedDate":"2016-06-17T13:28:49","indexId":"70173936","displayToPublicDate":"2016-06-15T14:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3173,"text":"Proceedings of the Royal Society B","active":true,"publicationSubtype":{"id":10}},"title":"Historical baselines and the future of shell calcification for a foundation species in a changing ocean","docAbstract":"<p><span>Seawater pH and the availability of carbonate ions are decreasing due to anthropogenic carbon dioxide emissions, posing challenges for calcifying marine species. Marine mussels are of particular concern given their role as foundation species worldwide. Here, we document shell growth and calcification patterns in&nbsp;</span><i>Mytilus californianus</i><span>, the California mussel, over millennial and decadal scales. By comparing shell thickness across the largest modern shells, the largest mussels collected in the 1960s&ndash;1970s and shells from two Native American midden sites (&sim;1000&ndash;2420 years BP), we found that modern shells are thinner overall, thinner per age category and thinner per unit length. Thus, the largest individuals of this species are calcifying less now than in the past. Comparisons of shell thickness in smaller individuals over the past 10&ndash;40 years, however, do not show significant shell thinning. Given our sampling strategy, these results are unlikely to simply reflect within-site variability or preservation effects. Review of environmental and biotic drivers known to affect shell calcification suggests declining ocean pH as a likely explanation for the observed shell thinning. Further future decreases in shell thickness could have significant negative impacts on&nbsp;</span><i>M. californianus</i><span>&nbsp;survival and, in turn, negatively impact the species-rich complex that occupies mussel beds.</span>.</p>","language":"English","publisher":"The Royal Society","doi":"10.1098/rspb.2016.0392","usgsCitation":"Pfister, C.A., Roy, K., Wootton, T.J., McCoy, S.J., Paine, R.T., Suchanek, T., and Sanford, E., 2016, Historical baselines and the future of shell calcification for a foundation species in a changing ocean: Proceedings of the Royal Society B, v. 283, no. 1832, p. 1-8, https://doi.org/10.1098/rspb.2016.0392.","productDescription":"8 p.","startPage":"1","endPage":"8","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-075572","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":470881,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1098/rspb.2016.0392","text":"Publisher Index Page"},{"id":323897,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"283","issue":"1832","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-15","publicationStatus":"PW","scienceBaseUri":"57651f35e4b07657d19c78ab","contributors":{"authors":[{"text":"Pfister, Catherine A.","contributorId":172095,"corporation":false,"usgs":false,"family":"Pfister","given":"Catherine","email":"","middleInitial":"A.","affiliations":[{"id":26978,"text":"Dep't of Ecology & Evolution, University of Chicago","active":true,"usgs":false}],"preferred":false,"id":639585,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Roy, Kaustuv","contributorId":172096,"corporation":false,"usgs":false,"family":"Roy","given":"Kaustuv","email":"","affiliations":[{"id":26979,"text":"Section of Ecology, Behaviour & Evolution, U of C San Diego, CA","active":true,"usgs":false}],"preferred":false,"id":639586,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wootton, Timothy J.","contributorId":172097,"corporation":false,"usgs":false,"family":"Wootton","given":"Timothy","email":"","middleInitial":"J.","affiliations":[{"id":26980,"text":"Dep't of Ecology & Evolution, U of Chicago","active":true,"usgs":false}],"preferred":false,"id":639587,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"McCoy, Sophie J.","contributorId":172098,"corporation":false,"usgs":false,"family":"McCoy","given":"Sophie","email":"","middleInitial":"J.","affiliations":[{"id":26980,"text":"Dep't of Ecology & Evolution, U of Chicago","active":true,"usgs":false}],"preferred":false,"id":639588,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Paine, Robert T.","contributorId":172099,"corporation":false,"usgs":false,"family":"Paine","given":"Robert","email":"","middleInitial":"T.","affiliations":[{"id":26981,"text":"Dep't of Biology, U of Washington","active":true,"usgs":false}],"preferred":false,"id":639589,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Suchanek, Tom tsuchanek@usgs.gov","contributorId":152285,"corporation":false,"usgs":true,"family":"Suchanek","given":"Tom","email":"tsuchanek@usgs.gov","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":639584,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Sanford, Eric","contributorId":172100,"corporation":false,"usgs":false,"family":"Sanford","given":"Eric","email":"","affiliations":[{"id":26982,"text":"UC Davis, Bodega Marine Lab and Dept of Evolution and Ecology","active":true,"usgs":false}],"preferred":false,"id":639590,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70173888,"text":"70173888 - 2016 - Habitat use and growth of the western painted crayfish <i>Orconectes palmeri longimanus</i>","interactions":[],"lastModifiedDate":"2016-06-15T13:13:17","indexId":"70173888","displayToPublicDate":"2016-06-15T14:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2235,"text":"Journal of Crustacean Biology","active":true,"publicationSubtype":{"id":10}},"title":"Habitat use and growth of the western painted crayfish <i>Orconectes palmeri longimanus</i>","docAbstract":"<p><span>Identifying ontogenetic shifts in habitat use by aquatic organisms is necessary for improving conservation strategies; however, our ability to designate life stages based on surrogate metrics (i.e., length) is questionable without validation. This study identified growth patterns of age-0 western painted crayfish&nbsp;</span><i>Orconectes palmeri longimanus</i><span>&nbsp;(Faxon, 1898) reared in the laboratory, provided support for field-based designations of age-0 lengths, and identified microhabitat factors important to adult and juvenile presence from field collections. Two growth periods of a laboratory crayfish population were described using a broken line model: a rapid, early-growth period (weeks 2-20, slope&nbsp;= 0.81&nbsp;&plusmn; 0.03SE), and a slower, late-growth period (weeks 22-50, slope&nbsp;= 0.13&nbsp;&plusmn; 0.03SE). A&nbsp;smoothed curve was generated to represent the size distribution of juveniles from our laboratory population to determine the probability that an age-0 crayfish from our laboratory population had a carapace length (CL) similar to that found in previous field studies using onset of maturity (22.4&nbsp;mm CL). We determined that the probability of the age-0 crayfish in our summer laboratory population exceeding 22.4&nbsp;mm CL was 0.06. The threshold between the lower 0.95 and upper 0.05 probabilities was 22.9&nbsp;mm CL, confirming previous field observations of onset at maturity. We used this threshold to identify juveniles and adults from our field collections, and found that both life stages were positively associated with coarse substrate and negatively associated with water depth. Adults, however, were negatively related to gravel, whereas juveniles showed a positive relationship. This result is reflective of the relationship between crayfish body size and refuge use within the interstitial spaces of substrates, whereby adult crayfish are unable to seek refuge in the small interstitial spaces of gravel.</span></p>","language":"English","doi":"10.1163/1937240X-00002417","issn":"0278-0372","collaboration":"Oklahoma Cooperative Fish and Wildlife Research Unit","usgsCitation":"Dyer, J.J., Mouser, J., and Brewer, S.K., 2016, Habitat use and growth of the western painted crayfish <i>Orconectes palmeri longimanus</i>: Journal of Crustacean Biology, v. 36, no. 2, p. 172-179, https://doi.org/10.1163/1937240X-00002417.","productDescription":"8 p.","startPage":"172","endPage":"179","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-069448","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":470882,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1163/1937240x-00002417","text":"Publisher Index Page"},{"id":323688,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"36","issue":"2","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1ee4b07657d199cd71","contributors":{"authors":[{"text":"Dyer, Joseph J.","contributorId":140681,"corporation":false,"usgs":false,"family":"Dyer","given":"Joseph","email":"","middleInitial":"J.","affiliations":[{"id":7249,"text":"Oklahoma State University","active":true,"usgs":false}],"preferred":false,"id":639028,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mouser, Joshua","contributorId":171894,"corporation":false,"usgs":false,"family":"Mouser","given":"Joshua","affiliations":[],"preferred":false,"id":639029,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Brewer, Shannon K. 0000-0002-1537-3921 skbrewer@usgs.gov","orcid":"https://orcid.org/0000-0002-1537-3921","contributorId":2252,"corporation":false,"usgs":true,"family":"Brewer","given":"Shannon","email":"skbrewer@usgs.gov","middleInitial":"K.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":638892,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70173911,"text":"70173911 - 2016 - Physiology of the invasive apple snail <i>Pomacea maculata</i>: tolerance to low temperatures","interactions":[],"lastModifiedDate":"2016-09-27T10:15:35","indexId":"70173911","displayToPublicDate":"2016-06-15T13:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2455,"text":"Journal of Shellfish Research","active":true,"publicationSubtype":{"id":10}},"title":"Physiology of the invasive apple snail <i>Pomacea maculata</i>: tolerance to low temperatures","docAbstract":"<p>Apple snails of the genus <i>Pomacea</i> native to South America have invaded and become established in Europe, Asia, and the United States. Both the channeled apple snail <i>Pomacea canaliculata</i> and the island apple snail <i>Pomacea maculata</i> have been reported in the United States. The two species are difficult to distinguish using morphological characters, leading to uncertainty about the identity of the animals from populations in the United States. Because the snails are subtropical, their tolerance of low temperatures is a critical factor in limiting the spread of the animals from present localities along the coast of the Gulf of Mexico to more northern areas. The tolerance of P. <i>maculata</i> collected in Louisiana to temperatures as low as 0&deg;C was examined. There was no mortality among animals maintained in water at temperatures of 20&deg;C or 15&deg;C for 10 days. Survival of animals during a 10-day exposure to water at temperatures 10&deg;C and 5&deg;C was 50%. The LD<sub>50</sub> for a 10-day exposure was 7&deg;C. Snails did not survive more than 5 days in liquid water at 0&deg;C. Ammonia excretion by animals in temperatures of 20&deg;C and 15&deg;C was comparable to values reported for freshwater gastropods; at very low temperatures, excretion of ammonia was decreased. There was no difference in the mean values of the osmolality of the hemolymph of animals exposed to 20&deg;C, 15&deg;C and 10&deg;C for 10 days. Sequencing of mitochondrial cytochrome oxidase 1 identified the animals in the Louisiana population used in this study as P. <i>maculata.</i></p>","language":"English","publisher":"National Shellfisheries Association","doi":"10.2983/035.035.0122","usgsCitation":"Deaton, L.E., Schmidt, W., Leblanc, B., Carter, J., Mueck, K., and Merino, S., 2016, Physiology of the invasive apple snail <i>Pomacea maculata</i>: tolerance to low temperatures: Journal of Shellfish Research, v. 35, no. 1, p. 207-210, https://doi.org/10.2983/035.035.0122.","productDescription":"4 p.","startPage":"207","endPage":"210","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-067604","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":323678,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Louisana","city":"Terrebone Parish","otherGeospatial":"Bayou Black","volume":"35","issue":"1","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e20e4b07657d199cd9a","contributors":{"authors":[{"text":"Deaton, Lewis E.","contributorId":171881,"corporation":false,"usgs":false,"family":"Deaton","given":"Lewis","email":"","middleInitial":"E.","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638994,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schmidt, William ","contributorId":171882,"corporation":false,"usgs":false,"family":"Schmidt","given":"William ","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638995,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Leblanc, Brody","contributorId":171883,"corporation":false,"usgs":false,"family":"Leblanc","given":"Brody","email":"","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638996,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Carter, Jacoby 0000-0003-0110-0284 carterj@usgs.gov","orcid":"https://orcid.org/0000-0003-0110-0284","contributorId":2399,"corporation":false,"usgs":true,"family":"Carter","given":"Jacoby","email":"carterj@usgs.gov","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":638993,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Mueck, Kristy","contributorId":171884,"corporation":false,"usgs":false,"family":"Mueck","given":"Kristy","email":"","affiliations":[{"id":12987,"text":"Department of Biology, University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":638997,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Merino, Sergio 0000-0002-2834-2243 merinos@usgs.gov","orcid":"https://orcid.org/0000-0002-2834-2243","contributorId":3653,"corporation":false,"usgs":true,"family":"Merino","given":"Sergio","email":"merinos@usgs.gov","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":638998,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70173896,"text":"70173896 - 2016 - Community metabolism in shallow coral reef and seagrass ecosystems, lower Florida Keys","interactions":[],"lastModifiedDate":"2016-06-15T10:44:57","indexId":"70173896","displayToPublicDate":"2016-06-15T11:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2663,"text":"Marine Ecology Progress Series","active":true,"publicationSubtype":{"id":10}},"title":"Community metabolism in shallow coral reef and seagrass ecosystems, lower Florida Keys","docAbstract":"<p>Diurnal variation of net community production (NEP) and net community calcification (NEC) were measured in coral reef and seagrass biomes during October 2012 in the lower Florida Keys using a mesocosm enclosure and the oxygen gradient flux technique. Seagrass and coral reef sites showed diurnal variations of NEP and NEC, with positive values at near-seafloor light levels &gt;100&ndash;300 &micro;Einstein m-2 s-1. During daylight hours, we detected an average NEP of 12.3 and 8.6 mmol O2 m-2 h-1 at the seagrass and coral reef site, respectively. At night, NEP at the seagrass site was relatively constant, while on the coral reef, net respiration was highest immediately after dusk and decreased during the rest of the night. At the seagrass site, NEC values ranged from 0.20 g CaCO3 m-2 h-1 during daylight to -0.15 g CaCO3 m-2 h-1 at night, and from 0.17 to -0.10 g CaCO3 m-2 h-1 at the coral reef site. There were no significant differences in pH and aragonite saturation states (&Omega;ar) between the seagrass and coral reef sites. Decrease in light levels during thunderstorms significantly decreased NEP, transforming the system from net autotrophic to net heterotrophic.</p>","language":"English","publisher":"Oldendorf/Luhe","publisherLocation":"Germany","doi":"10.3354/meps11385","collaboration":"USF; Cooperative Institute for Marine and Atmospheric Studies; Dalhousie University; NOAA; University of Trinidad and Tobago; National Commission for Knowledge and Use of Biodiversity, Mexico; UAV Collaborative; LDEO, Columbia University","usgsCitation":"Turk, D., Yates, K.K., Vega-Rodriguez, M., Toro-Farmer, G., L’Esperance, C., Melo, N., Ramsewak, D., Estrada, S.C., Muller-Karger, F.E., Herwitz, S.R., and McGillis, W., 2016, Community metabolism in shallow coral reef and seagrass ecosystems, lower Florida Keys: Marine Ecology Progress Series, v. 538, p. 35-52, https://doi.org/10.3354/meps11385.","productDescription":"18 p.","startPage":"35","endPage":"52","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-057353","costCenters":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":470884,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3354/meps11385","text":"Publisher Index Page"},{"id":323667,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":323666,"type":{"id":15,"text":"Index Page"},"url":"https://www.int-res.com/abstracts/meps/v538/p35-52/"}],"country":"United States","state":"Florida","otherGeospatial":"Florida Keys","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -82.3919677734375,\n              24.761796517185815\n            ],\n            [\n              -82.3260498046875,\n              24.251973033707195\n            ],\n            [\n              -80.035400390625,\n              24.881453301317965\n            ],\n            [\n              -80.09582519531249,\n              25.31920114076412\n            ],\n            [\n              -82.3919677734375,\n              24.761796517185815\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"538","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1de4b07657d199cd6a","contributors":{"authors":[{"text":"Turk, Daniela","contributorId":171861,"corporation":false,"usgs":false,"family":"Turk","given":"Daniela","email":"","affiliations":[{"id":24650,"text":"Dalhousie University","active":true,"usgs":false}],"preferred":false,"id":638958,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Yates, Kimberly K. 0000-0001-8764-0358 kyates@usgs.gov","orcid":"https://orcid.org/0000-0001-8764-0358","contributorId":420,"corporation":false,"usgs":true,"family":"Yates","given":"Kimberly","email":"kyates@usgs.gov","middleInitial":"K.","affiliations":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":638959,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Vega-Rodriguez, Maria","contributorId":171862,"corporation":false,"usgs":false,"family":"Vega-Rodriguez","given":"Maria","email":"","affiliations":[{"id":7163,"text":"University of South Florida","active":true,"usgs":false}],"preferred":false,"id":638960,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Toro-Farmer, Gerardo","contributorId":171863,"corporation":false,"usgs":false,"family":"Toro-Farmer","given":"Gerardo","email":"","affiliations":[{"id":7163,"text":"University of South Florida","active":true,"usgs":false}],"preferred":false,"id":638961,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"L’Esperance, Chris","contributorId":171865,"corporation":false,"usgs":false,"family":"L’Esperance","given":"Chris","email":"","affiliations":[{"id":24650,"text":"Dalhousie University","active":true,"usgs":false}],"preferred":false,"id":638962,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Melo, Nelson","contributorId":171864,"corporation":false,"usgs":false,"family":"Melo","given":"Nelson","email":"","affiliations":[{"id":26959,"text":"NOAA and Cooperative Institute for Marine and Atmospheric Studies, UM","active":true,"usgs":false}],"preferred":false,"id":638963,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Ramsewak, Deanesch","contributorId":171866,"corporation":false,"usgs":false,"family":"Ramsewak","given":"Deanesch","email":"","affiliations":[{"id":26960,"text":"University of Trinidad and Tobago","active":true,"usgs":false}],"preferred":false,"id":638964,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Estrada, S. Cerdeira","contributorId":171867,"corporation":false,"usgs":false,"family":"Estrada","given":"S.","email":"","middleInitial":"Cerdeira","affiliations":[{"id":26961,"text":"National Comission for Knowledge and Use of Biodiversity, Mexico","active":true,"usgs":false}],"preferred":false,"id":638965,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Muller-Karger, Frank E.","contributorId":68230,"corporation":false,"usgs":true,"family":"Muller-Karger","given":"Frank","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":638966,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Herwitz, Stan R.","contributorId":171868,"corporation":false,"usgs":false,"family":"Herwitz","given":"Stan","email":"","middleInitial":"R.","affiliations":[{"id":26962,"text":"NASA UAV Collaborative, Moffet Field, CA","active":true,"usgs":false}],"preferred":false,"id":638967,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"McGillis, Wade","contributorId":171869,"corporation":false,"usgs":false,"family":"McGillis","given":"Wade","email":"","affiliations":[{"id":26963,"text":"LDEO, Columbia University","active":true,"usgs":false}],"preferred":false,"id":638968,"contributorType":{"id":1,"text":"Authors"},"rank":11}]}}
,{"id":70173897,"text":"70173897 - 2016 - How can present and future satellite missions support scientific studies that address ocean acidification?","interactions":[],"lastModifiedDate":"2016-06-15T10:31:36","indexId":"70173897","displayToPublicDate":"2016-06-15T11:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2929,"text":"Oceanography","active":true,"publicationSubtype":{"id":10}},"title":"How can present and future satellite missions support scientific studies that address ocean acidification?","docAbstract":"<p>Space-based observations offer unique capabilities for studying spatial and temporal dynamics of the upper ocean inorganic carbon cycle and, in turn, supporting research tied to ocean acidification (OA). Satellite sensors measuring sea surface temperature, color, salinity, wind, waves, currents, and sea level enable a fuller understanding of a range of physical, chemical, and biological phenomena that drive regional OA dynamics as well as the potentially varied impacts of carbon cycle change on a broad range of ecosystems. Here, we update and expand on previous work that addresses the benefits of space-based assets for OA and carbonate system studies. Carbonate chemistry and the key processes controlling surface ocean OA variability are reviewed. Synthesis of present satellite data streams and their utility in this arena are discussed, as are opportunities on the horizon for using new satellite sensors with increased spectral, temporal, and/or spatial resolution. We outline applications that include the ability to track the biochemically dynamic nature of water masses, to map coral reefs at higher resolution, to discern functional phytoplankton groups and their relationships to acid perturbations, and to track processes that contribute to acid variation near the land-ocean interface.</p>","language":"English","publisher":"Oceanography Society","publisherLocation":"Washington D.C.","doi":"10.5670/oceanog.2015.35","usgsCitation":"Salisbury, J., Vandemark, D., Jonsson, B., Balch, W., Chakraborty, S., Lohrenz, S., Chapron, B., Hales, B., Mannino, A., Mathis, J.T., Reul, N., Signorini, S., Wanninkhof, R., and Yates, K.K., 2016, How can present and future satellite missions support scientific studies that address ocean acidification?: Oceanography, v. 2, no. 28, p. 108-121, https://doi.org/10.5670/oceanog.2015.35.","productDescription":"14 p.","startPage":"108","endPage":"121","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-062415","costCenters":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":470883,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.5670/oceanog.2015.35","text":"Publisher Index Page"},{"id":323664,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":323631,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.5670/oceanog.2015.35"}],"volume":"2","issue":"28","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1fe4b07657d199cd80","contributors":{"authors":[{"text":"Salisbury, Joseph","contributorId":171870,"corporation":false,"usgs":false,"family":"Salisbury","given":"Joseph","email":"","affiliations":[{"id":12667,"text":"University of New 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kyates@usgs.gov","orcid":"https://orcid.org/0000-0001-8764-0358","contributorId":420,"corporation":false,"usgs":true,"family":"Yates","given":"Kimberly","email":"kyates@usgs.gov","middleInitial":"K.","affiliations":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":638921,"contributorType":{"id":1,"text":"Authors"},"rank":14}]}}
,{"id":70173810,"text":"70173810 - 2016 - Demonstration of the Cascadia G‐FAST geodetic earthquake early warning system for the Nisqually, Washington, earthquake","interactions":[],"lastModifiedDate":"2016-07-01T12:52:03","indexId":"70173810","displayToPublicDate":"2016-06-15T06:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3372,"text":"Seismological Research Letters","onlineIssn":"1938-2057","printIssn":"0895-0695","active":true,"publicationSubtype":{"id":10}},"title":"Demonstration of the Cascadia G‐FAST geodetic earthquake early warning system for the Nisqually, Washington, earthquake","docAbstract":"<p><span>A prototype earthquake early warning (EEW) system is currently in development in the Pacific Northwest. We have taken a two‐stage approach to EEW: (1)&nbsp;detection and initial characterization using strong‐motion data with the Earthquake Alarm Systems (ElarmS) seismic early warning package and (2)&nbsp;the triggering of geodetic modeling modules using Global Navigation Satellite Systems data that help provide robust estimates of large‐magnitude earthquakes. In this article we demonstrate the performance of the latter, the Geodetic First Approximation of Size and Time (G‐FAST) geodetic early warning system, using simulated displacements for the 2001</span><i>M</i><sub><span>w</span></sub><span>&nbsp;6.8 Nisqually earthquake. We test the timing and performance of the two G‐FAST source characterization modules, peak ground displacement scaling, and Centroid Moment Tensor‐driven finite‐fault‐slip modeling under ideal, latent, noisy, and incomplete data conditions. We show good agreement between source parameters computed by G‐FAST with previously published and postprocessed seismic and geodetic results for all test cases and modeling modules, and we discuss the challenges with integration into the U.S. Geological Survey&rsquo;s ShakeAlert EEW system.</span></p>","language":"English","publisher":"Seismological Society of America","doi":"10.1785/0220150255","usgsCitation":"Crowell, B., Schmidt, D., Bodin, P., Vidale, J., Gomberg, J.S., Hartog, J.R., Kress, V., Melbourne, T., Santillian, M., Minson, S.E., and Jamison, D., 2016, Demonstration of the Cascadia G‐FAST geodetic earthquake early warning system for the Nisqually, Washington, earthquake: Seismological Research Letters, v. 87, no. 4, p. 930-943, https://doi.org/10.1785/0220150255.","productDescription":"14 p.","startPage":"930","endPage":"943","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-070674","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":470885,"rank":2,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://digitalcommons.cwu.edu/geological_sciences/103","text":"External Repository"},{"id":324271,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Washington","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -124.0081787109375,\n              46.822616668804926\n            ],\n            [\n              -124.0081787109375,\n              47.37603463349758\n            ],\n            [\n              -122.37670898437499,\n              47.37603463349758\n            ],\n            [\n              -122.37670898437499,\n              46.822616668804926\n            ],\n            [\n              -124.0081787109375,\n              46.822616668804926\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"87","issue":"4","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-08","publicationStatus":"PW","scienceBaseUri":"576bb6b2e4b07657d1a22891","contributors":{"authors":[{"text":"Crowell, Brendan","contributorId":171723,"corporation":false,"usgs":false,"family":"Crowell","given":"Brendan","affiliations":[{"id":6934,"text":"University of Washington","active":true,"usgs":false}],"preferred":false,"id":638423,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schmidt, David","contributorId":7596,"corporation":false,"usgs":true,"family":"Schmidt","given":"David","affiliations":[],"preferred":false,"id":638424,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bodin, Paul","contributorId":104142,"corporation":false,"usgs":true,"family":"Bodin","given":"Paul","affiliations":[],"preferred":false,"id":638425,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Vidale, John","contributorId":95804,"corporation":false,"usgs":true,"family":"Vidale","given":"John","affiliations":[],"preferred":false,"id":638426,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Gomberg, Joan S. 0000-0002-0134-2606 gomberg@usgs.gov","orcid":"https://orcid.org/0000-0002-0134-2606","contributorId":1269,"corporation":false,"usgs":true,"family":"Gomberg","given":"Joan","email":"gomberg@usgs.gov","middleInitial":"S.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":638422,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hartog, J. Renate","contributorId":171724,"corporation":false,"usgs":false,"family":"Hartog","given":"J.","email":"","middleInitial":"Renate","affiliations":[{"id":6934,"text":"University of Washington","active":true,"usgs":false}],"preferred":false,"id":638427,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Kress, Victor","contributorId":171725,"corporation":false,"usgs":false,"family":"Kress","given":"Victor","email":"","affiliations":[{"id":6934,"text":"University of Washington","active":true,"usgs":false}],"preferred":false,"id":638428,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Melbourne, Tim","contributorId":67800,"corporation":false,"usgs":true,"family":"Melbourne","given":"Tim","email":"","affiliations":[],"preferred":false,"id":638429,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Santillian, Marcelo","contributorId":171726,"corporation":false,"usgs":false,"family":"Santillian","given":"Marcelo","email":"","affiliations":[{"id":26935,"text":"Central Washington University","active":true,"usgs":false}],"preferred":false,"id":638430,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Minson, Sarah E. 0000-0001-5869-3477 sminson@usgs.gov","orcid":"https://orcid.org/0000-0001-5869-3477","contributorId":5357,"corporation":false,"usgs":true,"family":"Minson","given":"Sarah","email":"sminson@usgs.gov","middleInitial":"E.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":638431,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Jamison, Dylan","contributorId":171727,"corporation":false,"usgs":false,"family":"Jamison","given":"Dylan","email":"","affiliations":[{"id":6655,"text":"University of Waterloo","active":true,"usgs":false}],"preferred":false,"id":638432,"contributorType":{"id":1,"text":"Authors"},"rank":11}]}}
,{"id":70173860,"text":"70173860 - 2016 - Identification of landscape features influencing gene flow: How useful are habitat selection models?","interactions":[],"lastModifiedDate":"2018-08-19T10:07:20","indexId":"70173860","displayToPublicDate":"2016-06-15T05:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1601,"text":"Evolutionary Applications","active":true,"publicationSubtype":{"id":10}},"title":"Identification of landscape features influencing gene flow: How useful are habitat selection models?","docAbstract":"<p>Understanding how dispersal patterns are influenced by landscape heterogeneity is critical for modeling species connectivity. Resource selection function (RSF) models are increasingly used in landscape genetics approaches. However, because the ecological factors that drive habitat selection may be different from those influencing dispersal and gene flow, it is important to consider explicit assumptions and spatial scales of measurement. We calculated pairwise genetic distance among 301 Dall's sheep (Ovis dalli dalli) in southcentral Alaska using an intensive noninvasive sampling effort and 15 microsatellite loci. We used multiple regression of distance matrices to assess the correlation of pairwise genetic distance and landscape resistance derived from an RSF, and combinations of landscape features hypothesized to influence dispersal. Dall's sheep gene flow was positively correlated with steep slopes, moderate peak normalized difference vegetation indices (NDVI), and open land cover. Whereas RSF covariates were significant in predicting genetic distance, the RSF model itself was not significantly correlated with Dall's sheep gene flow, suggesting that certain habitat features important during summer (rugged terrain, mid-range elevation) were not influential to effective dispersal. This work underscores that consideration of both habitat selection and landscape genetics models may be useful in developing management strategies to both meet the immediate survival of a species and allow for long-term genetic connectivity.</p>","language":"English","doi":"10.1111/eva.12389","usgsCitation":"Roffler, G.H., Schwartz, M.K., Pilgrim, K.L., Talbot, S.L., Sage, G.K., Adams, L., and Luikart, G., 2016, Identification of landscape features influencing gene flow: How useful are habitat selection models?: Evolutionary Applications, v. 9, no. 6, p. 805-817, https://doi.org/10.1111/eva.12389.","productDescription":"13 p.","startPage":"805","endPage":"817","numberOfPages":"13","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-063706","costCenters":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"links":[{"id":470887,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/eva.12389","text":"Publisher Index Page"},{"id":323719,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"9","issue":"6","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-03","publicationStatus":"PW","scienceBaseUri":"57626e1fe4b07657d199cd8a","chorus":{"doi":"10.1111/eva.12389","url":"http://dx.doi.org/10.1111/eva.12389","publisher":"Wiley-Blackwell","authors":"Roffler Gretchen H., Schwartz Michael K., Pilgrim Kristy L., Talbot Sandra L., Sage George K., Adams Layne G., Luikart Gordon","journalName":"Evolutionary Applications","publicationDate":"6/3/2016"},"contributors":{"authors":[{"text":"Roffler, Gretchen H. groffler@usgs.gov","contributorId":1946,"corporation":false,"usgs":true,"family":"Roffler","given":"Gretchen","email":"groffler@usgs.gov","middleInitial":"H.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638828,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schwartz, Michael K.","contributorId":102326,"corporation":false,"usgs":true,"family":"Schwartz","given":"Michael","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":638831,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Pilgrim, Kristy L.","contributorId":45222,"corporation":false,"usgs":true,"family":"Pilgrim","given":"Kristy","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":638832,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Talbot, Sandra L. 0000-0002-3312-7214 stalbot@usgs.gov","orcid":"https://orcid.org/0000-0002-3312-7214","contributorId":140512,"corporation":false,"usgs":true,"family":"Talbot","given":"Sandra","email":"stalbot@usgs.gov","middleInitial":"L.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":638829,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Sage, George K. 0000-0003-1431-2286 ksage@usgs.gov","orcid":"https://orcid.org/0000-0003-1431-2286","contributorId":87833,"corporation":false,"usgs":true,"family":"Sage","given":"George","email":"ksage@usgs.gov","middleInitial":"K.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":false,"id":638830,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Adams, Layne G. 0000-0001-6212-2896 ladams@usgs.gov","orcid":"https://orcid.org/0000-0001-6212-2896","contributorId":2776,"corporation":false,"usgs":true,"family":"Adams","given":"Layne G.","email":"ladams@usgs.gov","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638827,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Luikart, Gordon","contributorId":97409,"corporation":false,"usgs":false,"family":"Luikart","given":"Gordon","affiliations":[{"id":6580,"text":"University of Montana, Flathead Lake Biological Station, Polson, Montana 59860, USA","active":true,"usgs":false}],"preferred":false,"id":638833,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70173821,"text":"70173821 - 2016 - And the first one now will later be last: Time-reversal in cormack-jolly-seber models","interactions":[],"lastModifiedDate":"2016-06-15T16:33:05","indexId":"70173821","displayToPublicDate":"2016-06-15T00:25:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5001,"text":"Statistical Science","active":true,"publicationSubtype":{"id":10}},"title":"And the first one now will later be last: Time-reversal in cormack-jolly-seber models","docAbstract":"The models of Cormack, Jolly and Seber (CJS) are remarkable in providing a rich set of inferences about population survival, recruitment, abundance and even sampling probabilities from a seemingly limited data source: a matrix of 1's and 0's reflecting animal captures and recaptures at multiple sampling occasions. Survival and sampling probabilities are estimated directly in CJS models, whereas estimators for recruitment and abundance were initially obtained as derived quantities. Various investigators have noted that just as standard modeling provides direct inferences about survival, reversing the time order of capture history data permits direct modeling and inference about recruitment. Here we review the development of reverse-time modeling efforts, emphasizing the kinds of inferences and questions to which they seem well suited.","language":"English","publisher":"Project Euclid","doi":"10.1214/16-STS546","usgsCitation":"Nichols, J.D., 2016, And the first one now will later be last: Time-reversal in cormack-jolly-seber models: Statistical Science, v. 31, no. 2, p. 175-190, https://doi.org/10.1214/16-STS546.","productDescription":"16 p.","startPage":"175","endPage":"190","ipdsId":"IP-071767","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":470888,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1214/16-sts546","text":"Publisher Index Page"},{"id":323723,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"31","issue":"2","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57626e1ce4b07657d199cd60","contributors":{"authors":[{"text":"Nichols, James D. 0000-0002-7631-2890 jnichols@usgs.gov","orcid":"https://orcid.org/0000-0002-7631-2890","contributorId":140652,"corporation":false,"usgs":true,"family":"Nichols","given":"James","email":"jnichols@usgs.gov","middleInitial":"D.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":638544,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70188882,"text":"70188882 - 2016 - Surface slip during large Owens Valley earthquakes","interactions":[],"lastModifiedDate":"2017-06-27T09:52:37","indexId":"70188882","displayToPublicDate":"2016-06-15T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1757,"text":"Geochemistry, Geophysics, Geosystems","active":true,"publicationSubtype":{"id":10}},"title":"Surface slip during large Owens Valley earthquakes","docAbstract":"<p><span>The 1872 Owens Valley earthquake is the third largest known historical earthquake in California. Relatively sparse field data and a complex rupture trace, however, inhibited attempts to fully resolve the slip distribution and reconcile the total moment release. We present a new, comprehensive record of surface slip based on lidar and field investigation, documenting 162 new measurements of laterally and vertically displaced landforms for 1872 and prehistoric Owens Valley earthquakes. Our lidar analysis uses a newly developed analytical tool to measure fault slip based on cross-correlation of sublinear topographic features and to produce a uniquely shaped probability density function (PDF) for each measurement. Stacking PDFs along strike to form cumulative offset probability distribution plots (COPDs) highlights common values corresponding to single and multiple-event displacements. Lateral offsets for 1872 vary systematically from ∼1.0 to 6.0 m and average 3.3 ± 1.1 m (2σ). Vertical offsets are predominantly east-down between ∼0.1 and 2.4 m, with a mean of 0.8 ± 0.5 m. The average lateral-to-vertical ratio compiled at specific sites is ∼6:1. Summing displacements across subparallel, overlapping rupture traces implies a maximum of 7–11 m and net average of 4.4 ± 1.5 m, corresponding to a geologic M</span><sub><i>w</i></sub><span> ∼7.5 for the 1872 event. We attribute progressively higher-offset lateral COPD peaks at 7.1 ± 2.0 m, 12.8 ± 1.5 m, and 16.6 ± 1.4 m to three earlier large surface ruptures. Evaluating cumulative displacements in context with previously dated landforms in Owens Valley suggests relatively modest rates of fault slip, averaging between ∼0.6 and 1.6 mm/yr (1σ) over the late Quaternary.</span></p>","language":"English","publisher":"Geological Society of America","doi":"10.1002/2015GC006033","usgsCitation":"Haddon, E., Amos, C., Zielke, O., Jayko, A.S., and Burgmann, R., 2016, Surface slip during large Owens Valley earthquakes: Geochemistry, Geophysics, Geosystems, v. 17, no. 6, p. 2239-2269, https://doi.org/10.1002/2015GC006033.","productDescription":"31 p.","startPage":"2239","endPage":"2269","ipdsId":"IP-069700","costCenters":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"links":[{"id":470889,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/2015gc006033","text":"Publisher Index Page"},{"id":342937,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","otherGeospatial":"Owens Valley","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -118.8,\n              35.7\n            ],\n            [\n              -117.4,\n              35.7\n            ],\n            [\n              -117.4,\n              37.7\n            ],\n            [\n              -118.8,\n              37.7\n            ],\n            [\n              -118.8,\n              35.7\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"17","issue":"6","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2016-06-22","publicationStatus":"PW","scienceBaseUri":"59536ea9e4b062508e3c7a81","contributors":{"authors":[{"text":"Haddon, E.K.","contributorId":193553,"corporation":false,"usgs":false,"family":"Haddon","given":"E.K.","email":"","affiliations":[],"preferred":false,"id":700808,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Amos, C.B.","contributorId":193554,"corporation":false,"usgs":false,"family":"Amos","given":"C.B.","email":"","affiliations":[],"preferred":false,"id":700809,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Zielke, O.","contributorId":166853,"corporation":false,"usgs":false,"family":"Zielke","given":"O.","affiliations":[{"id":24561,"text":"KAUST","active":true,"usgs":false}],"preferred":false,"id":700810,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Jayko, Angela S. 0000-0002-7378-0330 ajayko@usgs.gov","orcid":"https://orcid.org/0000-0002-7378-0330","contributorId":2531,"corporation":false,"usgs":true,"family":"Jayko","given":"Angela","email":"ajayko@usgs.gov","middleInitial":"S.","affiliations":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":700807,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Burgmann, R.","contributorId":193555,"corporation":false,"usgs":false,"family":"Burgmann","given":"R.","affiliations":[],"preferred":false,"id":700811,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70186615,"text":"70186615 - 2016 - Pockmarks in Passamaquoddy Bay, New Brunswick, Canada","interactions":[],"lastModifiedDate":"2017-04-10T09:48:42","indexId":"70186615","displayToPublicDate":"2016-06-15T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1790,"text":"Geological Society, London, Memoirs","active":true,"publicationSubtype":{"id":10}},"title":"Pockmarks in Passamaquoddy Bay, New Brunswick, Canada","docAbstract":"<p><span>Pockmarks are seafloor depressions associated with fluid escape (</span><span class=\"xref-bibr\">Judd &amp; Hovland 2007</span><span>). They proliferate in the muddy seafloors of coastal Gulf of Maine and Bay of Fundy, where they are associated with shallow natural gas likely of biogenic origin (</span><span class=\"xref-bibr\">Ussler <i>et al.</i> 2003</span><span>; </span><span class=\"xref-bibr\">Rogers <i>et al.</i> 2006</span><span>; </span><span class=\"xref-bibr\">Wildish <i>et al.</i> 2008</span><span>). In North America, shallow-water pockmark fields are not reported south of Long Island Sound, despite the abundance of gassy, muddy estuaries. The absence of pockmarks south of the limit of North American glaciation suggests that local and regional heterogeneities, possibly related to glacial or sea-level history or bedrock geology, influence pockmark field distribution. In shallow-water embayments, such as Passamaquoddy Bay, New Brunswick, pockmarks can be large (&gt;200 m diameter) and number in the thousands.</span></p>","language":"English","publisher":"The Geological Society","publisherLocation":"London","doi":"10.1144/M46.60","usgsCitation":"Brothers, L.L., Legere, C., Hughes Clark, J., Kelley, J., Barnhardt, W., Andrews, B., and Belknap, D., 2016, Pockmarks in Passamaquoddy Bay, New Brunswick, Canada: Geological Society, London, Memoirs, v. 46, p. 111-112, https://doi.org/10.1144/M46.60.","productDescription":"2 p.","startPage":"111","endPage":"112","ipdsId":"IP-061303","costCenters":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":339495,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada","state":"New Brunswick","otherGeospatial":"Passamaquoddy Bay","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -67.181396484375,\n              44.91668060637917\n            ],\n            [\n              -66.86141967773438,\n              44.91668060637917\n            ],\n            [\n              -66.86141967773438,\n              45.188812246819055\n            ],\n            [\n              -67.181396484375,\n              45.188812246819055\n            ],\n            [\n              -67.181396484375,\n              44.91668060637917\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"46","publishingServiceCenter":{"id":11,"text":"Pembroke PSC"},"noUsgsAuthors":false,"publicationDate":"2016-11-30","publicationStatus":"PW","scienceBaseUri":"58ebadade4b0b4d95d32009b","contributors":{"authors":[{"text":"Brothers, Laura L. 0000-0003-2986-5166 lbrothers@usgs.gov","orcid":"https://orcid.org/0000-0003-2986-5166","contributorId":176698,"corporation":false,"usgs":true,"family":"Brothers","given":"Laura","email":"lbrothers@usgs.gov","middleInitial":"L.","affiliations":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":689966,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Legere, Christine","contributorId":89781,"corporation":false,"usgs":true,"family":"Legere","given":"Christine","email":"","affiliations":[],"preferred":false,"id":689967,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hughes Clark, J.E.","contributorId":190618,"corporation":false,"usgs":false,"family":"Hughes Clark","given":"J.E.","email":"","affiliations":[],"preferred":false,"id":689968,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kelley, J.T.","contributorId":190620,"corporation":false,"usgs":false,"family":"Kelley","given":"J.T.","email":"","affiliations":[],"preferred":false,"id":689969,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Barnhardt, Walter wbarnhardt@usgs.gov","contributorId":190621,"corporation":false,"usgs":true,"family":"Barnhardt","given":"Walter","email":"wbarnhardt@usgs.gov","affiliations":[],"preferred":true,"id":689970,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Andrews, Brian bandrews@usgs.gov","contributorId":190622,"corporation":false,"usgs":true,"family":"Andrews","given":"Brian","email":"bandrews@usgs.gov","affiliations":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":689971,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Belknap, D.F.","contributorId":190623,"corporation":false,"usgs":false,"family":"Belknap","given":"D.F.","email":"","affiliations":[],"preferred":false,"id":689972,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70173545,"text":"70173545 - 2016 - Influences of summer water temperatures on the movement, distribution, and resources use of fluvial Westslope Cutthroat Trout in the South Fork Clearwater River basin","interactions":[],"lastModifiedDate":"2016-06-14T15:02:00","indexId":"70173545","displayToPublicDate":"2016-06-14T16:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"Influences of summer water temperatures on the movement, distribution, and resources use of fluvial Westslope Cutthroat Trout in the South Fork Clearwater River basin","docAbstract":"<p><span>Although many Westslope Cutthroat Trout&nbsp;</span><i>Oncorhynchus clarkii lewisi</i><span>&nbsp;populations in Idaho are robust and stable, population densities in some systems remain below management objectives. In many of those systems, such as in the South Fork Clearwater River (SFCR) system, environmental conditions (e.g., summer temperatures) are hypothesized to limit populations of Westslope Cutthroat Trout. Radiotelemetry and snorkeling methods were used to describe seasonal movement patterns, distribution, and habitat use of Westslope Cutthroat Trout in the SFCR during the summers of 2013 and 2014. Sixty-six radio transmitters were surgically implanted into Westslope Cutthroat Trout (170&ndash;405 mm TL) from May 30&ndash;June 25, 2013, and June 20&ndash;July 6, 2014. Sedentary and mobile summer movement patterns by Westslope Cutthroat Trout were observed in the SFCR. Westslope Cutthroat Trout were generally absent from the lower SFCR. In the upper region of the SFCR, fish generally moved from the main-stem SFCR into tributaries as water temperatures increased during the summer. Fish remained in the middle region of the SFCR where water temperatures were cooler than in the upper or lower regions of the SFCR. A spatially explicit water temperature model indicated that the upper and lower regions of the SFCR exceeded thermal tolerance levels of Westslope Cutthroat Trout throughout the summer. During snorkeling, 23 Westslope Cutthroat Trout were observed in 13 sites along the SFCR and at low density (mean &plusmn; SD, 0.0003 &plusmn; 0.0001 fish/m</span><sup>2</sup><span>). The distribution of fish observed during snorkeling was consistent with the distribution of radio-tagged fish in the SFCR during the summer. Anthropogenic activities (i.e., grazing, mining, road construction, and timber harvest) in the SFCR basin likely altered the natural flow dynamics and temperature regime and thereby limited stream habitat in the SFCR system for Westslope Cutthroat Trout.</span></p>","language":"English","publisher":"American Fisheries Society","doi":"10.1080/02755947.2016.1141124","usgsCitation":"Dobos, M.E., Corsi, M., Schill, D.J., DuPont, J.M., and Quist, M.C., 2016, Influences of summer water temperatures on the movement, distribution, and resources use of fluvial Westslope Cutthroat Trout in the South Fork Clearwater River basin: North American Journal of Fisheries Management, v. 36, no. 3, p. 549-567, https://doi.org/10.1080/02755947.2016.1141124.","productDescription":"19 p.","startPage":"549","endPage":"567","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-065451","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":323599,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Idaho","otherGeospatial":"South Fork Clearwater River,","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -116.3067626953125,\n              45.794339630460705\n            ],\n            [\n              -116.3067626953125,\n              46.524855311033434\n            ],\n            [\n              -114.356689453125,\n              46.524855311033434\n            ],\n            [\n              -114.356689453125,\n              45.794339630460705\n            ],\n            [\n              -116.3067626953125,\n              45.794339630460705\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"36","issue":"3","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-16","publicationStatus":"PW","scienceBaseUri":"57611c9ee4b04f417c2c32ff","contributors":{"authors":[{"text":"Dobos, Marika E.","contributorId":171810,"corporation":false,"usgs":false,"family":"Dobos","given":"Marika","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":638759,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Corsi, Matthew P.","contributorId":171811,"corporation":false,"usgs":false,"family":"Corsi","given":"Matthew P.","affiliations":[],"preferred":false,"id":638760,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Schill, Daniel J.","contributorId":66562,"corporation":false,"usgs":true,"family":"Schill","given":"Daniel","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":638761,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"DuPont, Joseph M.","contributorId":171812,"corporation":false,"usgs":false,"family":"DuPont","given":"Joseph","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":638762,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Quist, Michael C. 0000-0001-8268-1839 mquist@usgs.gov","orcid":"https://orcid.org/0000-0001-8268-1839","contributorId":171392,"corporation":false,"usgs":true,"family":"Quist","given":"Michael","email":"mquist@usgs.gov","middleInitial":"C.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":false,"id":637284,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70173848,"text":"70173848 - 2016 - Biological low pH Mn(II) oxidation in a manganese deposit influenced by metal-rich groundwater","interactions":[],"lastModifiedDate":"2016-06-14T12:44:01","indexId":"70173848","displayToPublicDate":"2016-06-14T13:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":850,"text":"Applied and Environmental Microbiology","active":true,"publicationSubtype":{"id":10}},"title":"Biological low pH Mn(II) oxidation in a manganese deposit influenced by metal-rich groundwater","docAbstract":"<p><span>The mechanisms, key organisms, and geochemical significance of biological low-pH Mn(II) oxidation are largely unexplored. Here, we investigated the structure of indigenous Mn(II)-oxidizing microbial communities in a secondary subsurface Mn oxide deposit influenced by acidic (pH 4.8) metal-rich groundwater in a former uranium mining area. Microbial diversity was highest in the Mn deposit compared to the adjacent soil layers and included the majority of known Mn(II)-oxidizing bacteria (MOB) and two genera of known Mn(II)-oxidizing fungi (MOF). Electron X-ray microanalysis showed that romanechite [(Ba,H</span><sub>2</sub><span>O)</span><sub>2</sub><span>(Mn</span><sup>4+</sup><span>,Mn</span><sup>3+</sup><span>)</span><sub>5</sub><span>O</span><sub>10</sub><span>] was conspicuously enriched in the deposit. Canonical correspondence analysis revealed that certain fungal, bacterial, and archaeal groups were firmly associated with the autochthonous Mn oxides. Eight MOB within the&nbsp;</span><span id=\"named-content-1\" class=\"named-content genus-species\">Proteobacteria</span><span>,&nbsp;</span><span id=\"named-content-2\" class=\"named-content genus-species\">Actinobacteria</span><span>, and&nbsp;</span><span id=\"named-content-3\" class=\"named-content genus-species\">Bacteroidetes</span><span>&nbsp;and one MOF strain belonging to&nbsp;</span><span id=\"named-content-4\" class=\"named-content genus-species\">Ascomycota</span><span>&nbsp;were isolated at pH 5.5 or 7.2 from the acidic Mn deposit. Soil-groundwater microcosms demonstrated 2.5-fold-faster Mn(II) depletion in the Mn deposit than adjacent soil layers. No depletion was observed in the abiotic controls, suggesting that biological contribution is the main driver for Mn(II) oxidation at low pH. The composition and species specificity of the native low-pH Mn(II) oxidizers were highly adapted to&nbsp;</span><i>in situ</i><span>&nbsp;conditions, and these organisms may play a central role in the fundamental biogeochemical processes (e.g., metal natural attenuation) occurring in the acidic, oligotrophic, and metalliferous subsoil ecosystems.</span></p>","language":"English","publisher":"American Society for Microbiology","doi":"10.1128/AEM.03844-15","usgsCitation":"Bohu, T., Akob, D.M., Abratis, M., Lazar, C., and Küsel, K., 2016, Biological low pH Mn(II) oxidation in a manganese deposit influenced by metal-rich groundwater: Applied and Environmental Microbiology, v. 82, no. 10, p. 3009-3021, https://doi.org/10.1128/AEM.03844-15.","productDescription":"13 p.","startPage":"3009","endPage":"3021","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-073478","costCenters":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"links":[{"id":470891,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1128/aem.03844-15","text":"Publisher Index Page"},{"id":323588,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"82","issue":"10","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57611c9ce4b04f417c2c32eb","contributors":{"authors":[{"text":"Bohu, Tsing","contributorId":37657,"corporation":false,"usgs":false,"family":"Bohu","given":"Tsing","email":"","affiliations":[{"id":13425,"text":"Aquatic Geomicrobiology, Institute of Ecology, Friedrich Schiller University Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638718,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Akob, Denise M. 0000-0003-1534-3025 dakob@usgs.gov","orcid":"https://orcid.org/0000-0003-1534-3025","contributorId":4980,"corporation":false,"usgs":true,"family":"Akob","given":"Denise","email":"dakob@usgs.gov","middleInitial":"M.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":5058,"text":"Office of the Chief Scientist for Water","active":true,"usgs":true}],"preferred":true,"id":638719,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Abratis, Michael","contributorId":171795,"corporation":false,"usgs":false,"family":"Abratis","given":"Michael","email":"","affiliations":[{"id":26945,"text":"Institute of Geosciences, Friedrich Schiller University Jena, Burgweg 11, 07743 Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638720,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lazar, Cassandre S.","contributorId":171796,"corporation":false,"usgs":false,"family":"Lazar","given":"Cassandre S.","affiliations":[{"id":26946,"text":"Aquatic Geomicrobiology, Institute of Ecology, Friedrich Schiller University Jena, Dornburger-Str. 159, 07743 Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638721,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Küsel, Kirsten","contributorId":96191,"corporation":false,"usgs":false,"family":"Küsel","given":"Kirsten","affiliations":[{"id":13425,"text":"Aquatic Geomicrobiology, Institute of Ecology, Friedrich Schiller University Jena, Germany","active":true,"usgs":false}],"preferred":false,"id":638722,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70173850,"text":"70173850 - 2016 - Evidence for common ancestry among viruses isolated from wild birds in Beringia and highly pathogenic intercontinental reassortant H5N1 and H5N2 influenza A viruses","interactions":[],"lastModifiedDate":"2017-02-22T09:43:42","indexId":"70173850","displayToPublicDate":"2016-06-14T12:45:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1988,"text":"Infection, Genetics and Evolution","active":true,"publicationSubtype":{"id":10}},"title":"Evidence for common ancestry among viruses isolated from wild birds in Beringia and highly pathogenic intercontinental reassortant H5N1 and H5N2 influenza A viruses","docAbstract":"<p><span>Highly pathogenic clade 2.3.4.4 H5N8, H5N2, and H5N1 influenza A viruses were first detected in wild, captive, and domestic birds in North America in November&ndash;December 2014. In this study, we used wild waterbird samples collected in Alaska prior to the initial detection of clade 2.3.4.4 H5 influenza A viruses in North America to assess the evidence for: (1) dispersal of highly pathogenic influenza A viruses from East Asia to North America by migratory birds via Alaska and (2) ancestral origins of clade 2.3.4.4 H5 reassortant viruses in Beringia. Although we did not detect highly pathogenic influenza A viruses in our sample collection from western Alaska, we did identify viruses that contained gene segments sharing recent common ancestry with intercontinental reassortant H5N2 and H5N1 viruses. Results of phylogenetic analyses and estimates for times of most recent common ancestry support migratory birds sampled in Beringia as maintaining viral diversity closely related to novel highly pathogenic influenza A virus genotypes detected in North America. Although our results do not elucidate the route by which highly pathogenic influenza A viruses were introduced into North America, genetic evidence is consistent with the hypothesized trans-Beringian route of introduction via migratory birds.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.meegid.2016.02.035","usgsCitation":"Ramey, A.M., Reeves, A.B., Teslaa, J.L., Nashold, S.W., Donnelly, T.F., Bahl, J., and Hall, J.S., 2016, Evidence for common ancestry among viruses isolated from wild birds in Beringia and highly pathogenic intercontinental reassortant H5N1 and H5N2 influenza A viruses: Infection, Genetics and Evolution, v. 40, p. 176-185, https://doi.org/10.1016/j.meegid.2016.02.035.","productDescription":"10 p.","startPage":"176","endPage":"185","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-068837","costCenters":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":470892,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.meegid.2016.02.035","text":"Publisher Index Page"},{"id":323581,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"40","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57611c9de4b04f417c2c32f5","chorus":{"doi":"10.1016/j.meegid.2016.02.035","url":"http://dx.doi.org/10.1016/j.meegid.2016.02.035","publisher":"Elsevier BV","authors":"Ramey Andrew M., Reeves Andrew B., TeSlaa Joshua L., Nashold Sean, Donnelly Tyrone, Bahl Justin, Hall Jeffrey S.","journalName":"Infection, Genetics and Evolution","publicationDate":"6/2016"},"contributors":{"authors":[{"text":"Ramey, Andrew M. 0000-0002-3601-8400 aramey@usgs.gov","orcid":"https://orcid.org/0000-0002-3601-8400","contributorId":1872,"corporation":false,"usgs":true,"family":"Ramey","given":"Andrew","email":"aramey@usgs.gov","middleInitial":"M.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":638696,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Reeves, Andrew B. 0000-0002-7526-0726 areeves@usgs.gov","orcid":"https://orcid.org/0000-0002-7526-0726","contributorId":167362,"corporation":false,"usgs":true,"family":"Reeves","given":"Andrew","email":"areeves@usgs.gov","middleInitial":"B.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638697,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Teslaa, Joshua L. 0000-0001-7802-3454 jteslaa@usgs.gov","orcid":"https://orcid.org/0000-0001-7802-3454","contributorId":5794,"corporation":false,"usgs":true,"family":"Teslaa","given":"Joshua","email":"jteslaa@usgs.gov","middleInitial":"L.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":false,"id":638699,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Nashold, Sean W. 0000-0002-8869-6633 snashold@usgs.gov","orcid":"https://orcid.org/0000-0002-8869-6633","contributorId":3611,"corporation":false,"usgs":true,"family":"Nashold","given":"Sean","email":"snashold@usgs.gov","middleInitial":"W.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":false,"id":638700,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Donnelly, Tyrone F. tfdonnelly@usgs.gov","contributorId":4369,"corporation":false,"usgs":true,"family":"Donnelly","given":"Tyrone","email":"tfdonnelly@usgs.gov","middleInitial":"F.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":638698,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Bahl, Justin","contributorId":171803,"corporation":false,"usgs":false,"family":"Bahl","given":"Justin","affiliations":[{"id":26950,"text":"University of Texas School of Public Health, 1200 Pressler Street, Houston, TX 77030, USA","active":true,"usgs":false}],"preferred":false,"id":638701,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hall, Jeffrey S. 0000-0001-5599-2826 jshall@usgs.gov","orcid":"https://orcid.org/0000-0001-5599-2826","contributorId":2254,"corporation":false,"usgs":true,"family":"Hall","given":"Jeffrey","email":"jshall@usgs.gov","middleInitial":"S.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":638702,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70173840,"text":"70173840 - 2016 - Disease prevalence and snail predation associated with swell-generated damage on the threatened coral, <i>Acropora palmata</i> (Lamarck)","interactions":[],"lastModifiedDate":"2016-06-14T11:39:52","indexId":"70173840","displayToPublicDate":"2016-06-14T12:30:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3912,"text":"Frontiers in Marine Science","onlineIssn":"2296-7745","active":true,"publicationSubtype":{"id":10}},"title":"Disease prevalence and snail predation associated with swell-generated damage on the threatened coral, <i>Acropora palmata</i> (Lamarck)","docAbstract":"<p>Disturbances such as tropical storms cause coral mortality and reduce coral cover as a direct result of physical damage. Storms can be one of the most important disturbances in coral reef ecosystems, and it is crucial to understand their long-term impacts on coral populations. The primary objective of this study was to determine trends in disease prevalence and snail predation on damaged and undamaged colonies of the threatened coral species, Acropora palmata, following an episode of heavy ocean swells in the US Virgin Islands (USVI). At three sites on St. Thomas and St. John, colonies of A. palmata were surveyed monthly over 1 year following a series of large swells in March 2008 that fragmented 30&ndash;93% of colonies on monitored reefs. Post-disturbance surveys conducted from April 2008 through March 2009 showed that swell-generated damage to A. palmata caused negative indirect effects that compounded the initial direct effects of physical disturbance. During the 12 months after the swell event, white pox disease prevalence was 41% higher for colonies that sustained damage from the swells than for undamaged colonies (df = 207, p = 0.01) with greatest differences in disease prevalence occurring during warm water months. In addition, the corallivorous snail, Coralliophila abbreviata, was 46% more abundant on damaged corals than undamaged corals during the 12 months after the swell event (df = 207, p = 0.006).</p>","language":"English","publisher":"Frontiers","doi":"10.3389/fmars.2016.00077","usgsCitation":"Bright, A.J., Rogers, C.S., Brandt, M.E., Muller, E., and Smith, T.B., 2016, Disease prevalence and snail predation associated with swell-generated damage on the threatened coral, <i>Acropora palmata</i> (Lamarck): Frontiers in Marine Science, v. 3, Article 77, https://doi.org/10.3389/fmars.2016.00077.","productDescription":"Article 77","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-053130","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":470893,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3389/fmars.2016.00077","text":"Publisher Index Page"},{"id":323577,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"3","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-24","publicationStatus":"PW","scienceBaseUri":"57611c9ce4b04f417c2c32ef","contributors":{"authors":[{"text":"Bright, Allan J.","contributorId":171793,"corporation":false,"usgs":false,"family":"Bright","given":"Allan","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":638634,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rogers, Caroline S. 0000-0001-9056-6961 caroline_rogers@usgs.gov","orcid":"https://orcid.org/0000-0001-9056-6961","contributorId":3126,"corporation":false,"usgs":true,"family":"Rogers","given":"Caroline","email":"caroline_rogers@usgs.gov","middleInitial":"S.","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":638633,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Brandt, Marilyn E.","contributorId":171794,"corporation":false,"usgs":false,"family":"Brandt","given":"Marilyn","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":638679,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Muller, Erinn","contributorId":149012,"corporation":false,"usgs":false,"family":"Muller","given":"Erinn","affiliations":[],"preferred":false,"id":638680,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Smith, Tyler B.","contributorId":150546,"corporation":false,"usgs":false,"family":"Smith","given":"Tyler","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":638635,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70173847,"text":"70173847 - 2016 - Endocrine disrupting activities of surface water associated with a West Virginia oil and gas industry wastewater disposal site","interactions":[],"lastModifiedDate":"2018-08-07T11:56:27","indexId":"70173847","displayToPublicDate":"2016-06-14T12:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Endocrine disrupting activities of surface water associated with a West Virginia oil and gas industry wastewater disposal site","docAbstract":"<p>Currently, &gt;95% of end disposal of hydraulic fracturing wastewater from unconventional oil and gas operations in the US occurs via injection wells. Key data gaps exist in understanding the potential impact of underground injection on surface water quality and environmental health. The goal of this study was to assess endocrine disrupting activity in surface water at a West Virginia injection well disposal site. Water samples were collected from a background site in the area and upstream, on, and downstream of the disposal facility. Samples were solid-phase extracted, and extracts assessed for agonist and antagonist hormonal activities for five hormone receptors in mammalian and yeast reporter gene assays. Compared to reference water extracts upstream and distal to the disposal well, samples collected adjacent and downstream exhibited considerably higher antagonist activity for the estrogen, androgen, progesterone, glucocorticoid and thyroid hormone receptors. In contrast, low levels of agonist activity were measured in upstream/distal sites, and were inhibited or absent at downstream sites with significant antagonism. Concurrent analyses by partner laboratories (published separately) describe the analytical and geochemical profiling of the water; elevated conductivity as well as high sodium, chloride, strontium, and barium concentrations indicate impacts due to handling of unconventional oil and gas wastewater. Notably, antagonist activities in downstream samples were at equivalent authentic standard concentrations known to disrupt reproduction and/or development in aquatic animals. Given the widespread use of injection wells for end-disposal of hydraulic fracturing wastewater, these data raise concerns for human and animal health nearby.</p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2016.03.113","usgsCitation":"Kassotis, C., Iwanowicz, L., Akob, D.M., Cozzarelli, I.M., Mumford, A.C., Orem, W.H., and Nagel, S., 2016, Endocrine disrupting activities of surface water associated with a West Virginia oil and gas industry wastewater disposal site: Science of the Total Environment, v. 557-558, p. 901-910, https://doi.org/10.1016/j.scitotenv.2016.03.113.","productDescription":"10 p.","startPage":"901","endPage":"910","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-074246","costCenters":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":589,"text":"Toxic Substances Hydrology Program","active":true,"usgs":true}],"links":[{"id":323575,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"557-558","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57611c9ce4b04f417c2c32f2","contributors":{"authors":[{"text":"Kassotis, Christopher D.","contributorId":26967,"corporation":false,"usgs":true,"family":"Kassotis","given":"Christopher D.","affiliations":[],"preferred":false,"id":638665,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Iwanowicz, Luke R.  0000-0002-1197-6178 liwanowicz@usgs.gov","orcid":"https://orcid.org/0000-0002-1197-6178","contributorId":150383,"corporation":false,"usgs":true,"family":"Iwanowicz","given":"Luke R. ","email":"liwanowicz@usgs.gov","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":638666,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Akob, Denise M. 0000-0003-1534-3025 dakob@usgs.gov","orcid":"https://orcid.org/0000-0003-1534-3025","contributorId":4980,"corporation":false,"usgs":true,"family":"Akob","given":"Denise","email":"dakob@usgs.gov","middleInitial":"M.","affiliations":[{"id":5058,"text":"Office of the Chief Scientist for Water","active":true,"usgs":true},{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638664,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Cozzarelli, Isabelle M. 0000-0002-5123-1007 icozzare@usgs.gov","orcid":"https://orcid.org/0000-0002-5123-1007","contributorId":1693,"corporation":false,"usgs":true,"family":"Cozzarelli","given":"Isabelle","email":"icozzare@usgs.gov","middleInitial":"M.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":49175,"text":"Geology, Energy & Minerals Science Center","active":true,"usgs":true}],"preferred":true,"id":638667,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Mumford, Adam C. 0000-0002-8082-8910 amumford@usgs.gov","orcid":"https://orcid.org/0000-0002-8082-8910","contributorId":171791,"corporation":false,"usgs":true,"family":"Mumford","given":"Adam","email":"amumford@usgs.gov","middleInitial":"C.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638668,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Orem, William H. 0000-0003-4990-0539 borem@usgs.gov","orcid":"https://orcid.org/0000-0003-4990-0539","contributorId":577,"corporation":false,"usgs":true,"family":"Orem","given":"William","email":"borem@usgs.gov","middleInitial":"H.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":638669,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Nagel, Susan C.","contributorId":56147,"corporation":false,"usgs":true,"family":"Nagel","given":"Susan C.","affiliations":[],"preferred":false,"id":638670,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70173846,"text":"70173846 - 2016 - Wastewater disposal from unconventional oil and gas development degrades stream quality at a West Virginia injection facility","interactions":[],"lastModifiedDate":"2018-08-07T12:10:53","indexId":"70173846","displayToPublicDate":"2016-06-14T12:15:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1565,"text":"Environmental Science & Technology","onlineIssn":"1520-5851","printIssn":"0013-936X","active":true,"publicationSubtype":{"id":10}},"title":"Wastewater disposal from unconventional oil and gas development degrades stream quality at a West Virginia injection facility","docAbstract":"<p>The development of unconventional oil and gas (UOG) resources has rapidly increased in recent years; however, the environmental impacts and risks are poorly understood. A single well can generate millions of liters of wastewater, representing a mixture of formation brine and injected hydraulic fracturing fluids. One of the most common methods for wastewater disposal is underground injection; we are assessing potential risks of this method through an intensive, interdisciplinary study at an injection disposal facility in West Virginia. In June 2014, waters collected downstream from the site had elevated specific conductance (416 &mu;S/cm) and Na, Cl, Ba, Br, Sr, and Li concentrations, compared to upstream, background waters (conductivity, 74 &mu;S/cm). Elevated TDS, a marker of UOG wastewater, provided an early indication of impacts in the stream. Wastewater inputs are also evident by changes in 87Sr/86Sr in streamwater adjacent to the disposal facility. Sediments downstream from the facility were enriched in Ra and had high bioavailable Fe(III) concentrations relative to upstream sediments. Microbial communities in downstream sediments had lower diversity and shifts in composition. Although the hydrologic pathways were not able to be assessed, these data provide evidence demonstrating that activities at the disposal facility are impacting a nearby stream and altering the biogeochemistry of nearby ecosystems.</p>","language":"English","publisher":"American Chemical Society","doi":"10.1021/acs.est.6b00428","usgsCitation":"Akob, D.M., Mumford, A.C., Orem, W.H., Engle, M.A., Klinges, J., Kent, D.B., and Cozzarelli, I.M., 2016, Wastewater disposal from unconventional oil and gas development degrades stream quality at a West Virginia injection facility: Environmental Science & Technology, v. 50, no. 11, p. 5517-5525, https://doi.org/10.1021/acs.est.6b00428.","productDescription":"9 p.","startPage":"5517","endPage":"5525","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-075053","costCenters":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":589,"text":"Toxic Substances Hydrology Program","active":true,"usgs":true}],"links":[{"id":470895,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1021/acs.est.6b00428","text":"Publisher Index Page"},{"id":323576,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"50","issue":"11","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2016-05-18","publicationStatus":"PW","scienceBaseUri":"57611c9fe4b04f417c2c330c","chorus":{"doi":"10.1021/acs.est.6b00428","url":"http://dx.doi.org/10.1021/acs.est.6b00428","publisher":"American Chemical Society (ACS)","authors":"Akob Denise M., Mumford Adam C., Orem William, Engle Mark A., Klinges J. Grace, Kent Douglas B., Cozzarelli Isabelle M.","journalName":"Environmental Science & Technology","publicationDate":"6/7/2016","auditedOn":"5/20/2016","publiclyAccessibleDate":"5/18/2016"},"contributors":{"authors":[{"text":"Akob, Denise M. 0000-0003-1534-3025 dakob@usgs.gov","orcid":"https://orcid.org/0000-0003-1534-3025","contributorId":4980,"corporation":false,"usgs":true,"family":"Akob","given":"Denise","email":"dakob@usgs.gov","middleInitial":"M.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":5058,"text":"Office of the Chief Scientist for Water","active":true,"usgs":true}],"preferred":true,"id":638657,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mumford, Adam C. 0000-0002-8082-8910 amumford@usgs.gov","orcid":"https://orcid.org/0000-0002-8082-8910","contributorId":171791,"corporation":false,"usgs":true,"family":"Mumford","given":"Adam","email":"amumford@usgs.gov","middleInitial":"C.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638658,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Orem, William H. 0000-0003-4990-0539 borem@usgs.gov","orcid":"https://orcid.org/0000-0003-4990-0539","contributorId":577,"corporation":false,"usgs":true,"family":"Orem","given":"William","email":"borem@usgs.gov","middleInitial":"H.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":638659,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Engle, Mark A. 0000-0001-5258-7374 engle@usgs.gov","orcid":"https://orcid.org/0000-0001-5258-7374","contributorId":584,"corporation":false,"usgs":true,"family":"Engle","given":"Mark","email":"engle@usgs.gov","middleInitial":"A.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":638660,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Klinges, Julia jklinges@usgs.gov","contributorId":171792,"corporation":false,"usgs":true,"family":"Klinges","given":"Julia","email":"jklinges@usgs.gov","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":638661,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Kent, Douglas B. 0000-0003-3758-8322 dbkent@usgs.gov","orcid":"https://orcid.org/0000-0003-3758-8322","contributorId":1871,"corporation":false,"usgs":true,"family":"Kent","given":"Douglas","email":"dbkent@usgs.gov","middleInitial":"B.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":638662,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Cozzarelli, Isabelle M. 0000-0002-5123-1007 icozzare@usgs.gov","orcid":"https://orcid.org/0000-0002-5123-1007","contributorId":1693,"corporation":false,"usgs":true,"family":"Cozzarelli","given":"Isabelle","email":"icozzare@usgs.gov","middleInitial":"M.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":49175,"text":"Geology, Energy & Minerals Science Center","active":true,"usgs":true}],"preferred":true,"id":638663,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70171091,"text":"tm15C3 - 2016 - Recording and submitting specimen history data","interactions":[{"subject":{"id":70171091,"text":"tm15C3 - 2016 - Recording and submitting specimen history data","indexId":"tm15C3","publicationYear":"2016","noYear":false,"title":"Recording and submitting specimen history data"},"predicate":"IS_PART_OF","object":{"id":70118922,"text":"tm15 - 2015 - Field Manual of Wildlife Diseases","indexId":"tm15","publicationYear":"2015","noYear":false,"title":"Field Manual of Wildlife Diseases"},"id":1}],"isPartOf":{"id":70118922,"text":"tm15 - 2015 - Field Manual of Wildlife Diseases","indexId":"tm15","publicationYear":"2015","noYear":false,"title":"Field Manual of Wildlife Diseases"},"lastModifiedDate":"2018-07-05T11:02:44","indexId":"tm15C3","displayToPublicDate":"2016-06-14T12:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":335,"text":"Techniques and Methods","code":"TM","onlineIssn":"2328-7055","printIssn":"2328-7047","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"15-C3","title":"Recording and submitting specimen history data","docAbstract":"<h1>Summary</h1><p>In wildlife disease investigations, determining the history or background of a problem is the first significant step toward establishing a diagnosis and aiding agencies with management considerations. The diagnostic process and overall investigation is often greatly expedited by a chronological record accompanying specimens submitted for laboratory evaluation. Knowing where and when the outbreak is taking place, what the environmental conditions and species involved are, and clinical signs in sick animals, along with necropsy findings and diagnostic test results are important for understanding the natural history or epizootiology of disease outbreaks. It becomes increasingly difficult to retrospectively obtain all of the pertinent history as time passes. The most helpful information is that which is obtained at the time of the die-off event by perceptive field biologists and other observers. Significant events preceding morbidity and/or mortality also provide valuable information on which to base corrective actions. In this chapter, readers will find information regarding what type of information should be recorded, how it should be recorded and why it is relevant to a disease investigation. A thoughtful approach in providing as much information as possible surrounding the situation including about host species and the biotic and abiotic environment, greatly aids in determining the most likely causative agent(s).</p>","largerWorkType":{"id":18,"text":"Report"},"largerWorkTitle":"Section C: Techniques in disease surveillance and investigation in Book 15: <i>Field Manual of Wildlife Diseases</i>","largerWorkSubtype":{"id":5,"text":"USGS Numbered Series"},"language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/tm15C3","usgsCitation":"Bodenstein, B.L., 2016, Recording and submitting specimen history data, <i>in</i> Franson, J.C., Friend, M., Gibbs, S.E.J., and Wild, M.A., eds., Field manual of wildlife diseases: U.S. Geological Survey Techniques and Methods, book 15, chap. C3, 7 p., https://dx.doi.org/10.3133/tm15c3.","productDescription":"iii, 7 p.","numberOfPages":"16","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-074475","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":323305,"rank":3,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/publication/tm15","text":"Techniques and Methods 15 - Field Manual of Wildlife Diseases","description":"TM 15-C3"},{"id":323302,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/tm/15/c03/coverthb.jpg"},{"id":323303,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/tm/15/c03/tm15c3.pdf","text":"Report","size":"533 KB","linkFileType":{"id":1,"text":"pdf"},"description":"TM 15-C3"}],"publicComments":"This report in Chapter 3 of Section C: Techniques in disease surveillance and investigation in Book 15: <i>Field Manual of Wildlife Diseases</i>","contact":"<p>Director, National Wildlife Health Center<br /> U.S. Geological Survey<br /> 6006 Schroeder Rd.<br /> Madison, WI 53711&ndash;6223<br /> <a href=\"http://www.nwhc.usgs.gov/\">http://www.nwhc.usgs.gov/ </a></p>","tableOfContents":"<ul>\n<li>Introduction</li>\n<li>What Information Should Be Collected</li>\n<li>Mortality Event Location Information&nbsp;</li>\n<li>Environmental Factors</li>\n<li>Date Specimens Collected</li>\n<li>Submitter</li>\n<li>Collector</li>\n<li>Method of Collection</li>\n<li>Specimen Preservation</li>\n<li>Estimating Disease Onset&nbsp;</li>\n<li>Species Affected</li>\n<li>Age</li>\n<li>Sex</li>\n<li>Number Sick/Number Dead</li>\n<li>Clinical Signs</li>\n<li>Population at Risk&nbsp;</li>\n<li>Population Movement &nbsp;</li>\n<li>Specific Features of Problem Areas</li>\n<li>Photographs, Videos, and Maps</li>\n<li>Followup to Initial Investigation</li>\n<li>Acknowledgments</li>\n<li>References Cited</li>\n<li>Supplementary Reading</li>\n</ul>","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"publishedDate":"2016-06-14","noUsgsAuthors":false,"publicationDate":"2016-06-14","publicationStatus":"PW","scienceBaseUri":"575fcb1fe4b04f417c2b267b","contributors":{"editors":[{"text":"Franson, J. Christian 0000-0002-0251-4238","orcid":"https://orcid.org/0000-0002-0251-4238","contributorId":107882,"corporation":false,"usgs":true,"family":"Franson","given":"J. Christian","affiliations":[],"preferred":false,"id":638107,"contributorType":{"id":2,"text":"Editors"},"rank":1},{"text":"Friend, Milton 0000-0002-2882-3629","orcid":"https://orcid.org/0000-0002-2882-3629","contributorId":31332,"corporation":false,"usgs":true,"family":"Friend","given":"Milton","email":"","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":638108,"contributorType":{"id":2,"text":"Editors"},"rank":2},{"text":"Gibbs, Samantha E.J.","contributorId":127739,"corporation":false,"usgs":false,"family":"Gibbs","given":"Samantha E.J.","affiliations":[{"id":7128,"text":"Department of Infectious Disease and Global Health, Cummings School of Veterinary Medicine, Tufts University, North Grafton, MA 01536, USA.","active":true,"usgs":false}],"preferred":false,"id":638109,"contributorType":{"id":2,"text":"Editors"},"rank":3},{"text":"Wild, Margaret A.","contributorId":26976,"corporation":false,"usgs":true,"family":"Wild","given":"Margaret A.","affiliations":[],"preferred":false,"id":638110,"contributorType":{"id":2,"text":"Editors"},"rank":4}],"authors":[{"text":"Bodenstein, Barbara L. 0000-0001-7946-0103 bbodenstein@usgs.gov","orcid":"https://orcid.org/0000-0001-7946-0103","contributorId":139354,"corporation":false,"usgs":true,"family":"Bodenstein","given":"Barbara L.","email":"bbodenstein@usgs.gov","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":false,"id":629826,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70157465,"text":"70157465 - 2016 - Fecal indicator organism modeling and microbial source tracking in environmental waters: Chapter 3.4.6","interactions":[],"lastModifiedDate":"2020-08-25T18:48:31.707401","indexId":"70157465","displayToPublicDate":"2016-06-14T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"chapter":"3.4.6","title":"Fecal indicator organism modeling and microbial source tracking in environmental waters: Chapter 3.4.6","docAbstract":"<p><span>Mathematical models have been widely applied to surface waters to estimate rates of settling, resuspension, flow, dispersion, and advection in order to calculate movement of particles that influence water quality. Of particular interest are the movement, survival, and persistence of microbial pathogens or their surrogates, which may contaminate recreational water, drinking water, or shellfish. Most models devoted to microbial water quality have been focused on fecal indicator organisms (FIO), which act as a surrogate for pathogens and viruses. Process-based modeling and statistical modeling have been used to track contamination events to source and to predict future events. The use of these two types of models require different levels of expertise and input; process-based models rely on theoretical physical constructs to explain present conditions and biological distribution while data-based, statistical models use extant paired data to do the same. The selection of the appropriate model and interpretation of results is critical to proper use of these tools in microbial source tracking. Integration of the modeling approaches could provide insight for tracking and predicting contamination events in real time. A review of modeling efforts reveals that process-based modeling has great promise for microbial source tracking efforts; further, combining the understanding of physical processes influencing FIO contamination developed with process-based models and molecular characterization of the population by gene-based (i.e., biological) or chemical markers may be an effective approach for locating sources and remediating contamination in order to protect human health better.</span></p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Manual of Environmental Microbiology","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"ASM Press","publisherLocation":"Washington, D.C.","doi":"10.1128/9781555818821.ch3.4.6","usgsCitation":"Nevers, M., Byappanahalli, M., Phanikumar, M.S., and Whitman, R.L., 2016, Fecal indicator organism modeling and microbial source tracking in environmental waters: Chapter 3.4.6, chap. 3.4.6 <i>of</i> Manual of Environmental Microbiology, p. 3.4.6-1-3.4.6-16, https://doi.org/10.1128/9781555818821.ch3.4.6.","productDescription":"16 p.","startPage":"3.4.6-1","endPage":"3.4.6-16","ipdsId":"IP-049156","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":340175,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"edition":"4","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationDate":"2015-09-01","publicationStatus":"PW","scienceBaseUri":"58ff0e9de4b006455f2d61bc","contributors":{"authors":[{"text":"Nevers, Meredith 0000-0001-6963-6734 mnevers@usgs.gov","orcid":"https://orcid.org/0000-0001-6963-6734","contributorId":2013,"corporation":false,"usgs":true,"family":"Nevers","given":"Meredith","email":"mnevers@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":573242,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Byappanahalli, Muruleedhara 0000-0001-5376-597X byappan@usgs.gov","orcid":"https://orcid.org/0000-0001-5376-597X","contributorId":147923,"corporation":false,"usgs":true,"family":"Byappanahalli","given":"Muruleedhara","email":"byappan@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":573243,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Phanikumar, Mantha S.","contributorId":147924,"corporation":false,"usgs":false,"family":"Phanikumar","given":"Mantha","email":"","middleInitial":"S.","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":692598,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Whitman, Richard L. rwhitman@usgs.gov","contributorId":542,"corporation":false,"usgs":true,"family":"Whitman","given":"Richard","email":"rwhitman@usgs.gov","middleInitial":"L.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":573245,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70189712,"text":"70189712 - 2016 - Money matters: Rapid post-earthquake financial decision-making","interactions":[],"lastModifiedDate":"2017-07-21T09:41:27","indexId":"70189712","displayToPublicDate":"2016-06-14T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5467,"text":"Natural Hazards Observer","active":true,"publicationSubtype":{"id":10}},"title":"Money matters: Rapid post-earthquake financial decision-making","docAbstract":"<p>Post-earthquake financial decision-making is a realm beyond that of many people. In the immediate aftermath of a damaging earthquake, billions of dollars of relief, recovery, and insurance funds are in the balance through new financial instruments that allow those with resources to hedge against disasters and those at risk to limit their earthquake losses and receive funds for response and recovery.</p>","language":"English","publisher":"Natural Hazards Center: University of Colorado","usgsCitation":"Wald, D.J., and Franco, G., 2016, Money matters: Rapid post-earthquake financial decision-making: Natural Hazards Observer, v. XL, no. 7, p. 24-27.","productDescription":"4 p.","startPage":"24","endPage":"27","ipdsId":"IP-080663","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":344159,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"XL","issue":"7","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"597312ade4b0ec1a488718f0","contributors":{"authors":[{"text":"Wald, David J. 0000-0002-1454-4514 wald@usgs.gov","orcid":"https://orcid.org/0000-0002-1454-4514","contributorId":795,"corporation":false,"usgs":true,"family":"Wald","given":"David","email":"wald@usgs.gov","middleInitial":"J.","affiliations":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":true,"id":705896,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Franco, Guillermo","contributorId":194951,"corporation":false,"usgs":false,"family":"Franco","given":"Guillermo","email":"","affiliations":[],"preferred":false,"id":705897,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70170263,"text":"70170263 - 2016 - Recreation, values and stewardship: Rethinking why people engage in environmental behaviors in parks and protected areas","interactions":[],"lastModifiedDate":"2020-08-25T18:41:38.093294","indexId":"70170263","displayToPublicDate":"2016-06-14T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"chapter":"19","title":"Recreation, values and stewardship: Rethinking why people engage in environmental behaviors in parks and protected areas","docAbstract":"<p>Successfully promoting and encouraging the adoption of environmental stewardship behavior is an important responsibility for public land management agencies. Although people increasingly report high levels of concern about environmental issues, widespread patterns of stewardship behavior have not followed suit (Moore 2002). One concept that can be applied in social science research to explain behavior change is that of values. More specifically, <i>held</i> and <i>assigned</i> values lie at the heart of understanding why people around the world continue to live in unsustainable ways that impact parks and protected areas. A <i>held</i> value is an individual psychological orientation defined by Rokeach as “an enduring belief that a specific mode of conduct or endstate of existence is personally and socially preferable” (1973, 550). Held values are at the core of human cognition, and as such, influence attitudes and behavior. <i>Assigned</i> values on the other hand, according to Brown (1984), are the perceived qualities of an environment that are based on&nbsp;and deduced from held values. In other words, assigned values are considered the material and nonmaterial benefits that people believe they obtain from ecosystems. Held and assigned values predict stewardship behaviors (Figure 1). </p><p>During the 2013 George Wright Society Conference on Parks, Protected Areas, and Cultural Sites, we organized a session to improve our understanding of why individuals and groups choose to engage in stewardship behaviors that benefit the environment. We used held and assigned values as vehicles to explore what people cared about in diverse landscapes, review select case studies from across the globe, and question how best to incorporate visitor perspectives into protected area management decisions and policymaking. In addition to sharing project results, we also discussed the importance of accounting for multiple and often competing value perspectives, potential ways to integrate disciplinary perspectives on valuing nature, and future directions for social science research and practice. </p><p>In this paper, we present the results from our session to provide fodder for further contemplation about the timely question of how park and protected area managers can foster values that lead to environmental protection.</p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Engagement, education, and expectations—The future of parks and protected areas: Proceedings of the 2015 George Wright Society Conference on parks, protected areas, and cultural sites","largerWorkSubtype":{"id":12,"text":"Conference publication"},"conferenceTitle":"George Wright Society Conference on Parks, Protected Areas, and Cultural Sites","conferenceDate":"March 19- April 3, 2015","conferenceLocation":"Oakland, CA","language":"English","publisher":"George Wright Society","publisherLocation":"Hancock, MI","usgsCitation":"van Riper, C.J., Sharp, R., Bagstad, K.J., Vagias, W.M., Kwenye, J., Depper, G., and Freimund, W., 2016, Recreation, values and stewardship: Rethinking why people engage in environmental behaviors in parks and protected areas, chap. 19 <i>of</i> Engagement, education, and expectations—The future of parks and protected areas: Proceedings of the 2015 George Wright Society Conference on parks, protected areas, and cultural sites, p. 117-122.","productDescription":"6 p.","startPage":"117","endPage":"122","ipdsId":"IP-065984","costCenters":[{"id":318,"text":"Geosciences and Environmental Change Science Center","active":true,"usgs":true}],"links":[{"id":340079,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.georgewright.org/proceedings2015"},{"id":340080,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58fb1a4de4b0c3010a8087c1","contributors":{"authors":[{"text":"van Riper, Carena J.","contributorId":42827,"corporation":false,"usgs":false,"family":"van Riper","given":"Carena","email":"","middleInitial":"J.","affiliations":[{"id":6747,"text":"Texas A&M University","active":true,"usgs":false}],"preferred":false,"id":626685,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sharp, Ryan","contributorId":168598,"corporation":false,"usgs":false,"family":"Sharp","given":"Ryan","email":"","affiliations":[{"id":12661,"text":"Kansas State University","active":true,"usgs":false}],"preferred":false,"id":626686,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bagstad, Kenneth J. 0000-0001-8857-5615 kjbagstad@usgs.gov","orcid":"https://orcid.org/0000-0001-8857-5615","contributorId":3680,"corporation":false,"usgs":true,"family":"Bagstad","given":"Kenneth","email":"kjbagstad@usgs.gov","middleInitial":"J.","affiliations":[{"id":318,"text":"Geosciences and Environmental Change Science Center","active":true,"usgs":true}],"preferred":true,"id":626684,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Vagias, Wade M.","contributorId":98033,"corporation":false,"usgs":true,"family":"Vagias","given":"Wade","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":626687,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kwenye, Jane","contributorId":168599,"corporation":false,"usgs":false,"family":"Kwenye","given":"Jane","email":"","affiliations":[{"id":5097,"text":"University of Montana, Division of Biological Sciences","active":true,"usgs":false}],"preferred":false,"id":626688,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Depper, Gina","contributorId":168600,"corporation":false,"usgs":false,"family":"Depper","given":"Gina","email":"","affiliations":[{"id":7084,"text":"Clemson University","active":true,"usgs":false}],"preferred":false,"id":626689,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Freimund, Wayne","contributorId":168601,"corporation":false,"usgs":false,"family":"Freimund","given":"Wayne","email":"","affiliations":[{"id":5097,"text":"University of Montana, Division of Biological Sciences","active":true,"usgs":false}],"preferred":false,"id":626690,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70190232,"text":"70190232 - 2016 - Release of suppressed red spruce using canopy gap creation—Ecological restoration in the Central Appalachians","interactions":[],"lastModifiedDate":"2017-08-18T17:18:21","indexId":"70190232","displayToPublicDate":"2016-06-14T00:00:00","publicationYear":"2016","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2821,"text":"Natural Areas Journal","active":true,"publicationSubtype":{"id":10}},"title":"Release of suppressed red spruce using canopy gap creation—Ecological restoration in the Central Appalachians","docAbstract":"<p><span>Red spruce (</span><i>Picea rubens</i><span>) and red spruce-northern hardwood mixed stands once covered as much as 300,000 ha in the Central Appalachians, but now comprise no more than 21,000 ha. Recently, interest in restoration of this forest type has increased because red spruce forests provide habitat for a number of rare animal species. Our study reports the results of an understory red spruce release experiment in hardwood-dominated stands that have a small component of understory red spruce. In 2005, 188 target spruce were identified in sample plots at six locations in central West Virginia. We projected a vertical cylinder above the crown of all target spruces, and in 2007, we performed a release treatment whereby overtopping hardwoods were treated with herbicide using a stem injection technique. Release treatments removed 0–10% (Control), 11–50% (Low), 51–89% (Medium), and ≤90% (High) of the basal area of overtopping trees. We also took canopy photographs at the time of each remeasurement in 2007, 2010, and 2013, and compared basal removal treatments and resulting 2010 canopy openness and understory light values. The high treatment level provided significantly greater six-year dbh and height growth than the other treatment levels. Based on these results, we propose that a tree-centered release approach utilizing small canopy gaps that emulate the historical, gap-phase disturbance regime provides a good strategy for red spruce restoration in hardwood forests where overstory spruce are virtually absent, and where red spruce is largely relegated to the understory.</span></p>","language":"English","publisher":"Natural Areas Association","doi":"10.3375/043.036.0108","usgsCitation":"Rentch, J., Ford, W., Schuler, T., Palmer, J., and Diggins, C.A., 2016, Release of suppressed red spruce using canopy gap creation—Ecological restoration in the Central Appalachians: Natural Areas Journal, v. 36, no. 1, p. 29-37, https://doi.org/10.3375/043.036.0108.","productDescription":"9 p.","startPage":"29","endPage":"37","ipdsId":"IP-057768","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":470896,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"http://hdl.handle.net/10919/97922","text":"External Repository"},{"id":344967,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"36","issue":"1","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5997fc9de4b0b589267cd214","contributors":{"authors":[{"text":"Rentch, J.S.","contributorId":20587,"corporation":false,"usgs":true,"family":"Rentch","given":"J.S.","email":"","affiliations":[],"preferred":false,"id":708066,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ford, W. Mark 0000-0002-9611-594X wford@usgs.gov","orcid":"https://orcid.org/0000-0002-9611-594X","contributorId":172499,"corporation":false,"usgs":true,"family":"Ford","given":"W. Mark","email":"wford@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":false,"id":708039,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Schuler, T.S.","contributorId":195758,"corporation":false,"usgs":false,"family":"Schuler","given":"T.S.","email":"","affiliations":[],"preferred":false,"id":708067,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Palmer, J.","contributorId":25040,"corporation":false,"usgs":true,"family":"Palmer","given":"J.","affiliations":[],"preferred":false,"id":708068,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Diggins, Corinne A.","contributorId":171667,"corporation":false,"usgs":false,"family":"Diggins","given":"Corinne","email":"","middleInitial":"A.","affiliations":[{"id":33131,"text":"Dept of Fish and Wildlife Conservation, Virginia Tech","active":true,"usgs":false}],"preferred":false,"id":708069,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
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