{"pageNumber":"1177","pageRowStart":"29400","pageSize":"25","recordCount":46734,"records":[{"id":23160,"text":"ofr97470D - 1999 - Maps showing geology, oil and gas fields and geologic provinces of the South America region","interactions":[],"lastModifiedDate":"2024-01-25T16:35:44.413548","indexId":"ofr97470D","displayToPublicDate":"2019-10-11T10:15:00","publicationYear":"1999","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"97-470","chapter":"D","displayTitle":"Maps Showing Geology, Oil and Gas Fields and Geologic Provinces of the South America Region","title":"Maps showing geology, oil and gas fields and geologic provinces of the South America region","docAbstract":"<p>This digitally compiled map includes geology, geologic provinces, and oil and gas fields of South America. The map is part of a worldwide series on CD-ROM by World Energy Project released of the U.S. Geological Survey . The goal of the project is to assess the undiscovered, technically recoverable oil and gas resources of the world and report these results by the year 2000. For data management purposes the world is divided into eight energy regions corresponding approximately to the economic regions of the world as defined by the U.S. Department of State. South America (Region 6) includes Argentina, Bolivia, Brazil, Chile, Columbia, Ecuador, Falkland Islands, French Guiana, Guyuna, Netherlands, Netherlands Antilles, Paraguay, Peru, Suriname, Trinidad and Tobago, Uruguay, and Venezuela.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr97470D","usgsCitation":"Schenk, C.J, Viger, R.J., and Anderson, C.P., 1999, Maps showing geology, oil and gas fields and geologic provinces of the South America region: U.S. Geological Survey Open-File Report 97-470-D, 12 p., https://doi.org/10.3133/ofr97470D.","productDescription":"Report: 12 p.; 2 Data Releases","onlineOnly":"N","additionalOnlineFiles":"Y","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":424678,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9A3OJ9B","text":"South America Geologic Map","linkFileType":{"id":5,"text":"html"}},{"id":155761,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/1997/ofr-97-470/OF97-470D/coverthb.jpg"},{"id":424679,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P92H86MZ","text":"South America Province Boundaries","linkFileType":{"id":5,"text":"html"}},{"id":368256,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/1997/ofr-97-470/OF97-470D/ofr97470D.pdf","text":"Report","size":"4.06 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 97-470-D"}],"geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -88.41796875,\n              -58.07787626787517\n            ],\n            [\n              -30.761718749999996,\n              -58.07787626787517\n            ],\n            [\n              -30.761718749999996,\n              12.211180191503997\n            ],\n            [\n              -88.41796875,\n              12.211180191503997\n            ],\n            [\n              -88.41796875,\n              -58.07787626787517\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"../contact\" data-mce-href=\"../contact\">Contact Pubs Warehouse</a></p>","tableOfContents":"<ul><li>Preface</li><li>Introduction</li><li>Geologic Provinces of South America Region</li><li>Map Showing Geology, Oil and Gas Fields, Geologic Provinces of South America</li><li>Map Showing Oil and Gas Fields and Geologic Provinces of South America</li></ul>","publishedDate":"2000-03-01","noUsgsAuthors":false,"publicationDate":"2000-03-01","publicationStatus":"PW","scienceBaseUri":"4f4e4a19e4b07f02db605937","contributors":{"authors":[{"text":"Schenk, Christopher J. 0000-0002-0248-7305","orcid":"https://orcid.org/0000-0002-0248-7305","contributorId":72344,"corporation":false,"usgs":true,"family":"Schenk","given":"Christopher","email":"","middleInitial":"J.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":189548,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Viger, Roland J. 0000-0003-2520-714X","orcid":"https://orcid.org/0000-0003-2520-714X","contributorId":80711,"corporation":false,"usgs":true,"family":"Viger","given":"Roland J.","affiliations":[],"preferred":false,"id":189549,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Anderson, Christopher P.","contributorId":37367,"corporation":false,"usgs":true,"family":"Anderson","given":"Christopher P.","affiliations":[],"preferred":false,"id":189547,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70188272,"text":"70188272 - 1999 - Microsatellite analyses of Alameda Creek Rainbow/Steelhead trout","interactions":[],"lastModifiedDate":"2017-06-05T10:14:12","indexId":"70188272","displayToPublicDate":"2017-06-05T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":9,"text":"Other Report"},"title":"Microsatellite analyses of Alameda Creek Rainbow/Steelhead trout","docAbstract":"<p><span>Microsatellite genetic diversity found in Alameda Creek rainbow trout support a close genetic relationship with coastal trout found in Lagunitas Creek, Marin County, California. No significant genotypic or allelic frequencies associations could be drawn among Alameda Creek trout and fish collected from the four primary rainbow trout hatchery strains in use in California, Whitney, Mount Shasta, Coleman, and Hot Creek strains, indeed, genetic distance analyses (δμ<sup>2</sup>) supported genetic separation among Alameda Creek trout and hatchery trout with greater than 50% bootstrap values in 1000 replicate neighbor-joining trees. Fish collected for this study from Palo Seco and Sheppard Creeks shared allelic frequencies with both the fish in Alameda Creek and those found in Scott Creek in Santa Cruz County. Fish collected in Horseshoe Creek or San Lorenzo Creek (Alameda County) did not share this unique genetic relationship between Alameda Creek fish and putative wild coastal trout. These two streams had allelic frequencies similar to some hatchery trout strains and to wild trout captured in the Central Valley. These data suggest that there are two possible steelhead ESUs using the tributaries of San Francisco Bay (one coastal and one Central Valley) or that hatchery trout supplementation has impacted some, but not all streams with a subsequent loss of locally adapted genetic characteristics. These data support the implementation of conservation management of rainbow trout in the Alameda Creek drainage as part of the&nbsp;</span><span>central California coastal steelhead ESU.</span></p>","language":"English","publisher":"Applied Marine Sciences","usgsCitation":"Nielsen, J.L., and Fountain, M.C., 1999, Microsatellite analyses of Alameda Creek Rainbow/Steelhead trout, 17 p.","productDescription":"17 p.","costCenters":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"links":[{"id":342074,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59366dafe4b0f6c2d0d7d658","contributors":{"authors":[{"text":"Nielsen, Jennifer L.","contributorId":43722,"corporation":false,"usgs":true,"family":"Nielsen","given":"Jennifer","email":"","middleInitial":"L.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":697034,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fountain, Monique C.","contributorId":18528,"corporation":false,"usgs":true,"family":"Fountain","given":"Monique","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":697035,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70179677,"text":"70179677 - 1999 - Hydrology and geochemistry of carbonate springs in Mantua Valley, northern Utah","interactions":[],"lastModifiedDate":"2017-01-19T14:42:31","indexId":"70179677","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5260,"text":"Utah Geological Association Publications","active":true,"publicationSubtype":{"id":10}},"title":"Hydrology and geochemistry of carbonate springs in Mantua Valley, northern Utah","docAbstract":"<p>Water chemistry, tritium data, precipitation-discharge relations, geology, topography, and dye tracing were used to determine recharge areas, ground-water residence times, factors influencing ground-water flow, and aquifer characteristic for five springs that discharge from Paleozoic limestones and dolostones along the margin of Manuta Valley, northern Utah.</p><p>Temperature of Mantua Valley spring water ranged between 6.0 and 15.0 degrees Celsius. Spring-water temperature indicates that depth of circulation of ground water could be as shallow as 80 feet (25 meters) to as much as 1,150 feet (350 meters). Dissolved-solids concentration in the water from springs ranged from 176 to 268 milligrams per liter. Average total hardness of spring water ranged from 157 to 211 milligrams per liter. Water from all of the springs is a calcium-magnesium-bicarbonate type that generally is undersaturated with respect to calcite and dolomite. The molar calcium/magnesium ratio in spring water ranged from 1.21 to 1.88, and indicates that ground water flows through impure dolostone or a mixed limestone and dolostone terrace.</p><p>Discharge from carbonate springs in Mantua Valley ranges from about to 10 to 4,300 gallons per minute (0.6 to 271 liters per second). Seasonal variations in chemical parameters and discharge indicate that the aquifers supplying water to most of these springs are predominantly diffuse-flow systems that have been locally enhanced by bedrock dissolution. Estimated recharge area for th springs ranges from 2.7 to 7 square miles (7 to 18 square kilometers).</p><p>On the basis of tritium age dating, the mean residence time of ground water discharges from Olsens-West Hallins and Maple Springs was determined to be from 3 to 9, and from 4 to 15 years, respectively. Dye tracing from point sources 2.65 miles (4.26 kilometers) southeast of Maple Spring, however, indicates a substantially faster component of flow during snowmelt runoff, with a travel time of about 5 days, or an average ground-water velocity of about 2,700 feet per day (823 meters per day).</p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Geology of northern Utah and vicinity (Utah Geological Association Publication 27)","largerWorkSubtype":{"id":12,"text":"Conference publication"},"conferenceTitle":"Utah Geological Association Publication 1999 field Symposium","conferenceDate":"September 11, 1999","language":"English","publisher":"Utah Geological Association","publisherLocation":"Salt Lake City, UT","usgsCitation":"Rice, K.C., and Spangler, L.E., 1999, Hydrology and geochemistry of carbonate springs in Mantua Valley, northern Utah: Utah Geological Association Publications, p. 337-352.","productDescription":"16 p.","startPage":"337","endPage":"352","costCenters":[{"id":614,"text":"Virginia Water Science Center","active":true,"usgs":true}],"links":[{"id":333035,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":333037,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://www.utahgeology.org/wp/publications"}],"country":"United States","state":"Utah","otherGeospatial":"Mantua Valley","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -112.00149536132812,\n              41.32010701725659\n            ],\n            [\n              -112.00149536132812,\n              41.56562822121977\n            ],\n            [\n              -111.78520202636719,\n              41.56562822121977\n            ],\n            [\n              -111.78520202636719,\n              41.32010701725659\n            ],\n            [\n              -112.00149536132812,\n              41.32010701725659\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58774c9de4b0315b4c11ff2c","contributors":{"editors":[{"text":"Spangler, Lawrence E. 0000-0003-3928-8809 spangler@usgs.gov","orcid":"https://orcid.org/0000-0003-3928-8809","contributorId":973,"corporation":false,"usgs":true,"family":"Spangler","given":"Lawrence","email":"spangler@usgs.gov","middleInitial":"E.","affiliations":[{"id":610,"text":"Utah Water Science Center","active":true,"usgs":true}],"preferred":true,"id":658197,"contributorType":{"id":2,"text":"Editors"},"rank":1},{"text":"Allen, Constance J.","contributorId":178204,"corporation":false,"usgs":false,"family":"Allen","given":"Constance","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":658198,"contributorType":{"id":2,"text":"Editors"},"rank":2}],"authors":[{"text":"Rice, Karen C. 0000-0002-9356-5443 kcrice@usgs.gov","orcid":"https://orcid.org/0000-0002-9356-5443","contributorId":1998,"corporation":false,"usgs":true,"family":"Rice","given":"Karen","email":"kcrice@usgs.gov","middleInitial":"C.","affiliations":[{"id":614,"text":"Virginia Water Science Center","active":true,"usgs":true}],"preferred":false,"id":658195,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Spangler, Lawrence E. 0000-0003-3928-8809 spangler@usgs.gov","orcid":"https://orcid.org/0000-0003-3928-8809","contributorId":973,"corporation":false,"usgs":true,"family":"Spangler","given":"Lawrence","email":"spangler@usgs.gov","middleInitial":"E.","affiliations":[{"id":610,"text":"Utah Water Science Center","active":true,"usgs":true}],"preferred":true,"id":658196,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70179699,"text":"ofr95713_1999 - 1999 - Measuring streamflow in Virginia (1999 revision)","interactions":[{"subject":{"id":70179699,"text":"ofr95713_1999 - 1999 - Measuring streamflow in Virginia (1999 revision)","indexId":"ofr95713_1999","publicationYear":"1999","noYear":false,"title":"Measuring streamflow in Virginia (1999 revision)"},"predicate":"SUPERSEDED_BY","object":{"id":23946,"text":"ofr95713 - 2002 - Measuring streamflow in Virginia (2002 revision)","indexId":"ofr95713","publicationYear":"2002","noYear":false,"title":"Measuring streamflow in Virginia (2002 revision)"},"id":1}],"supersededBy":{"id":23946,"text":"ofr95713 - 2002 - Measuring streamflow in Virginia (2002 revision)","indexId":"ofr95713","publicationYear":"2002","noYear":false,"title":"Measuring streamflow in Virginia (2002 revision)"},"lastModifiedDate":"2017-01-19T14:42:12","indexId":"ofr95713_1999","displayToPublicDate":"2016-12-01T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"95-713","title":"Measuring streamflow in Virginia (1999 revision)","docAbstract":"<p>The U.S. Geological Survey (USGS), U.S. Department of the Interior, is the Nation's largest Earth-science information agency. Among its many responsibilities, such as map making and providing information on earthquakes and other natural hazards, the USGS provides information on the Nation's water resources. The USGS has collected and analyzed hydrologic (water-related) information for more than 100 years. In 1889, the first streamflow-gaging station (a site where regular observations of streamflow data are collected) operated in the United States by the USGS was established on the Rio Grande near Embudo, New Mexico. As the&nbsp;need for streamflow data increased, the USGS's streamflow-gaging program has grown to include more than 7,000 continuous-record streamflow-gaging stations. More than 90 percent of these stations are operated with at least partial support from State, local, and other Federal agencies.</p><p>In Virginia, the Department of Environmental Quality (DEQ) is a major cooperator in the streamflow-gaging program, which consists of 152 continuous-record streamflow-gaging stations located throughout the State (fig. 1). The USGS and DEQ cooperate to publish the annual USGS State data report, \"Water Resources Data-Virginia;\" this two-volume publication includes streamflow data collected at the 152 streamflow-gaging stations, chemical data collected at more than 24 streamflow-gaging stations, and ground-water data collected from more than 338 wells.</p>","language":"English","publisher":"U.S. Geological Survey","doi":"10.3133/ofr95713_1999","collaboration":"Prepared in cooperation with the Virginia Department of Environmental Quality - Water Division","usgsCitation":"Moberg, R.M., Rice, K.C., and Powell, E.D., 1999, Measuring streamflow in Virginia (1999 revision) (Revised in 1999): U.S. Geological Survey Open-File Report 95-713, HTML Document, https://doi.org/10.3133/ofr95713_1999.","productDescription":"HTML Document","costCenters":[{"id":614,"text":"Virginia Water Science 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 \"}}]}","edition":"Revised in 1999","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5878a4b6e4b04df303d95867","contributors":{"authors":[{"text":"Moberg, Roger M. rmmoberg@usgs.gov","contributorId":3655,"corporation":false,"usgs":true,"family":"Moberg","given":"Roger","email":"rmmoberg@usgs.gov","middleInitial":"M.","affiliations":[],"preferred":true,"id":658329,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rice, Karen C. 0000-0002-9356-5443 kcrice@usgs.gov","orcid":"https://orcid.org/0000-0002-9356-5443","contributorId":1998,"corporation":false,"usgs":true,"family":"Rice","given":"Karen","email":"kcrice@usgs.gov","middleInitial":"C.","affiliations":[{"id":614,"text":"Virginia Water Science Center","active":true,"usgs":true}],"preferred":false,"id":658330,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Powell, Eugene D.","contributorId":80309,"corporation":false,"usgs":true,"family":"Powell","given":"Eugene","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":658331,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70179263,"text":"70179263 - 1999 - Use of power analysis to develop detectable significance criteria for sea urchin toxicity tests","interactions":[],"lastModifiedDate":"2017-05-04T13:25:19","indexId":"70179263","displayToPublicDate":"2016-11-01T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":865,"text":"Aquatic Ecosystem Health & Management","active":true,"publicationSubtype":{"id":10}},"title":"Use of power analysis to develop detectable significance criteria for sea urchin toxicity tests","docAbstract":"<p><span>When sufficient data are available, the statistical power of a test can be determined using power analysis procedures. The term “detectable significance” has been coined to refer to this criterion based on power analysis and past performance of a test. This power analysis procedure has been performed with sea urchin (</span><i>Arbacia punctulata</i><span>) fertilization and embryological development data from sediment porewater toxicity tests. Data from 3100 and 2295 tests for the fertilization and embryological development tests, respectively, were used to calculate the criteria and regression equations describing the power curves. Using Dunnett's test, a minimum significant difference (MSD) (</span><i>β</i><span> = 0.05) of 15.5% and 19% for the fertilization test, and 16.4% and 20.6% for the embryological development test, for </span><i>α</i><span> ≤ 0.05 and </span><i>α</i><span> ≤ 0.01, respectively, were determined. The use of this second criterion reduces type I (false positive) errors and helps to establish a critical level of difference based on the past performance of the test.</span></p>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/14634989908656979","usgsCitation":"Carr, R., and Biedenbach, J., 1999, Use of power analysis to develop detectable significance criteria for sea urchin toxicity tests: Aquatic Ecosystem Health & Management, v. 2, no. 4, p. 413-418, https://doi.org/10.1080/14634989908656979.","productDescription":"6 p.","startPage":"413","endPage":"418","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":332529,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"2","issue":"4","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"585e45dee4b01224f329bf13","contributors":{"authors":[{"text":"Carr, R.S.","contributorId":31353,"corporation":false,"usgs":true,"family":"Carr","given":"R.S.","affiliations":[],"preferred":false,"id":656585,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Biedenbach, J.M.","contributorId":108262,"corporation":false,"usgs":true,"family":"Biedenbach","given":"J.M.","affiliations":[],"preferred":false,"id":656586,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70162436,"text":"70162436 - 1999 - Cloning, in Vitro expression, and novel phylogenetic classification of a channel catfish estrogen receptor","interactions":[],"lastModifiedDate":"2016-01-25T11:03:28","indexId":"70162436","displayToPublicDate":"2015-10-12T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1738,"text":"General and Comparative Endocrinology","active":true,"publicationSubtype":{"id":10}},"title":"Cloning, in Vitro expression, and novel phylogenetic classification of a channel catfish estrogen receptor","docAbstract":"<p><span>We obtained two channel catfish estrogen receptor (ccER) cDNA from liver of female fish using RT–PCR. The two fragments were identical in sequence except that the smaller one had an out-of-frame deletion in the E domain, suggesting the existence of ccER splice variants. The larger fragment was used to screen a cDNA library from liver of a prepubescent female. A cDNA was obtained that encoded a 581-amino-acid ER with a deduced molecular weight of 63.8 kDa. Extracts of COS-7 cells transfected with ccER cDNA bound estrogen with high affinity (</span><i>K</i><sub><i>d</i></sub><span>&nbsp;=&nbsp;4.7 nM) and specificity. Maximum parsimony and Neighbor Joining analyses were used to generate a phylogenetic classification of ccER on the basis of 18 full-length ER sequences. The tree suggested the existence of two major ER branches. One branch contained two clearly divergent clades which included all piscine ER (except Japanese eel ER) and all tetrapod ERα, respectively. The second major branch contained the eel ER and the mammalian ERβ. The high degree of divergence between the eel ER and mammalian ERβ suggested that they also represent distinct piscine and tetrapod ER. These data suggest that ERα and ERβ are present throughout vertebrates and that these two major ER types evolved by duplication of an ancestral ER gene. Sequence alignments with other members of the nuclear hormone receptor superfamily indicated the presence of 8 amino acids in the E domain that align exclusively among ER. Four of these amino acids have not received prior research attention and their function is unknown. The novel finding of putative ER splice variants in a nonmammalian vertebrate and the novel phylogenetic classification of ER offer new perspectives in understanding the diversification and function of ER.</span></p>","language":"English","publisher":"Elselvier","doi":"10.1006/gcen.1999.7196","usgsCitation":"Xia, Z., Patino, R., Gale, W., Maule, A., and Densmore, L., 1999, Cloning, in Vitro expression, and novel phylogenetic classification of a channel catfish estrogen receptor: General and Comparative Endocrinology, v. 113, no. 3, p. 360-368, https://doi.org/10.1006/gcen.1999.7196.","productDescription":"9 p.","startPage":"360","endPage":"368","numberOfPages":"9","onlineOnly":"Y","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":314747,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"113","issue":"3","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"56a75546e4b0b28f1184d7dc","contributors":{"authors":[{"text":"Xia, Z.","contributorId":152501,"corporation":false,"usgs":false,"family":"Xia","given":"Z.","email":"","affiliations":[],"preferred":false,"id":589556,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Patino, R.","contributorId":39915,"corporation":false,"usgs":true,"family":"Patino","given":"R.","email":"","affiliations":[],"preferred":false,"id":589557,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Gale, W.L.","contributorId":152438,"corporation":false,"usgs":false,"family":"Gale","given":"W.L.","email":"","affiliations":[],"preferred":false,"id":589558,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Maule, A.G.","contributorId":45067,"corporation":false,"usgs":true,"family":"Maule","given":"A.G.","email":"","affiliations":[],"preferred":false,"id":589559,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Densmore, L.D.","contributorId":152503,"corporation":false,"usgs":false,"family":"Densmore","given":"L.D.","email":"","affiliations":[],"preferred":false,"id":589560,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70162433,"text":"70162433 - 1999 - Antigenic and functional characterization of p57 produced by Renibacterium salmoninarum","interactions":[],"lastModifiedDate":"2023-12-06T23:12:20.761604","indexId":"70162433","displayToPublicDate":"2015-09-07T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1396,"text":"Diseases of Aquatic Organisms","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Antigenic and functional characterization of p57 produced by <i>Renibacterium salmoninarum</i>","title":"Antigenic and functional characterization of p57 produced by Renibacterium salmoninarum","docAbstract":"<p><i>Renibacterium salmoninarum</i>, the causative agent of bacterial kidney disease, produces large quantities of a 57-58 kDa protein (p57) during growth in broth culture and during infection of salmonid fish. Biological activities of secreted p57 include agglutination of salrnonid leucocytes and rabbit erythrocytes. We define the location of epitopes on p57 recognized by agglutination-blocking monoclonal antibodies (MAbs) 4Cl1, 4H8 and 4D3, and demonstrate that the majority of secreted p57 is a nlonomer that retains salrnonid leucocyte agglutinat~ng activity. The 3 MAbs bound a recombinant, amino-terminal fragment of p57 (211 aa) but not a carboxy-terminal fragment (315 aa) demonstrating that the neutralizing epitopes are located within the amino-terminal portion of p57. When combinations of the MAbs were used in an antigen capture ELISA. the epitopes recognized by the 3 MAbs were shown to be sterically separate. However, when the same MAb was used as both the coating and detection MAb, binding of the biotinylated detection MAb was not observed. These data indicate that the epitopes recognized by the 3 agglutination-blocking antibodies are functionally available only once per molecule and that native p57 exists as a monomer Similar ELISA results were obtained when kidney tissues from 3 naturally infected chinook salmon were assayed. Finally, a p57 monomer was purified using anion exchange and size exclusion chromatography that retained in vitro agglutinating activity. A model in which p57 is released from R. salmoninarum as a biologically active monomer during infection of salmonid fish is proposed. </p>","language":"English","publisher":"Inter-Research","doi":"10.3354/dao037043","usgsCitation":"Weins, G., Chien, M., Winton, J., and Kaatari, S., 1999, Antigenic and functional characterization of p57 produced by Renibacterium salmoninarum: Diseases of Aquatic Organisms, v. 37, no. 1, p. 43-52, https://doi.org/10.3354/dao037043.","productDescription":"10 p.","startPage":"43","endPage":"52","numberOfPages":"10","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":479381,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3354/dao037043","text":"Publisher Index Page"},{"id":314745,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"37","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"56a75542e4b0b28f1184d7c9","contributors":{"authors":[{"text":"Weins, G.","contributorId":152498,"corporation":false,"usgs":false,"family":"Weins","given":"G.","affiliations":[],"preferred":false,"id":589549,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Chien, M.S.","contributorId":152499,"corporation":false,"usgs":false,"family":"Chien","given":"M.S.","email":"","affiliations":[],"preferred":false,"id":589550,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Winton, J. R. 0000-0002-3505-5509","orcid":"https://orcid.org/0000-0002-3505-5509","contributorId":82441,"corporation":false,"usgs":true,"family":"Winton","given":"J. R.","affiliations":[],"preferred":false,"id":589551,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kaatari, S.L.","contributorId":152500,"corporation":false,"usgs":false,"family":"Kaatari","given":"S.L.","email":"","affiliations":[],"preferred":false,"id":589552,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70159824,"text":"70159824 - 1999 - Health evaluation of Columbian white-tailed deer on Julia Butler Hansen Refuge for the Columbian white-tailed deer","interactions":[],"lastModifiedDate":"2016-01-04T13:45:21","indexId":"70159824","displayToPublicDate":"2015-07-06T08:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":6,"text":"USGS Unnumbered Series"},"seriesTitle":{"id":383,"text":"Technical Report","active":false,"publicationSubtype":{"id":6}},"seriesNumber":"99-001","subseriesTitle":"NWHC Technical Report","title":"Health evaluation of Columbian white-tailed deer on Julia Butler Hansen Refuge for the Columbian white-tailed deer","docAbstract":"<p>The Columbian white-tailed deer ( Odocoileus virginianus leucurus) was designated an endangered species in 1968. At that time the estimated population along the lower Columbia River of Washington and Oregon was 300 to 400 deer (Gavin, 1984). The Julia Butler Hansen Refuge for the Columbian White-tailed Deer was established in 1972 to protect Columbian white-tailed deer and associated habitat Currently, an estimated 600 deer are present in several separate populations. The total refuge population is estimated at 200 animals. Of those, the mainland population consists of approximately 60 animals while the largest refuge island (Tenasillahe.Island) supports about 120 animals. The remaining 420 deer are present on private lands near the refuge (AI Clark, pers. com.).</p>\n<p>Higher than expected deer mortality on Tenasillahe Island in the spring of 1996 prompted refuge personnel to request assistance from the National Wildlife Health Center (NWHC) for diagnostic evaluation to determine the cause of the mortalities. The mortality event occurred in the wake of extraordinary .flooding that reduced the availability and quality of forage on the island. It is estimated that 50% of the deer population on the refuge died during this time period. The basic finding of emaciation attributable to probable starvation raised concerns regarding the health status of the deer herd, available food resources, and current population levels.</p>\n<p>A health evaluation was conducted on free-ranging deer from the refuge in February, 1998. This evaluation was an analysis of physiologic parameters obtained from live deer in an attempt to determine the health of individual animals and, with adequate sampling, the health of the population. This study was conducted during February to examine individual animal health during the seasonal period when the deer are in their poorest physical condition. The late winter period prior to spring green-up is a time when the effects ofbreeding and winter stress are most evident (Venne and Ozoga, 1971).</p>\n<p>The objectives of this study were to: (1) gather baseline physiologic data on a subset of the population, (2) evaluate the data to determine the health of the animals sampled, (3) if possible, identify causes of poor health and, ( 4) provide refuge personnel with information that will aid them in managing the population.</p>","language":"English","publisher":"U.S. Geological Survey","doi":"10.3133/70159824","usgsCitation":"Creekmore, T.E., and Glaser, L.C., 1999, Health evaluation of Columbian white-tailed deer on Julia Butler Hansen Refuge for the Columbian white-tailed deer: Technical Report 99-001, 34 p., https://doi.org/10.3133/70159824.","productDescription":"34 p.","numberOfPages":"36","onlineOnly":"N","additionalOnlineFiles":"N","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":311735,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/70159824.jpg"},{"id":313228,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/unnumbered/70159824/report.pdf","text":"Report","linkFileType":{"id":1,"text":"pdf"},"description":"Report"}],"country":"United States","state":"Oregon, Washington","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -123.53919982910156,\n              46.151297121751725\n            ],\n            [\n              -123.53919982910156,\n              46.295001661700226\n            ],\n            [\n              -123.2662582397461,\n              46.295001661700226\n            ],\n            [\n              -123.2662582397461,\n              46.151297121751725\n            ],\n            [\n              -123.53919982910156,\n              46.151297121751725\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"565d813fe4b071e7ea54347a","contributors":{"authors":[{"text":"Creekmore, Terry E.","contributorId":42179,"corporation":false,"usgs":true,"family":"Creekmore","given":"Terry","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":580600,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Glaser, Linda C.","contributorId":14703,"corporation":false,"usgs":true,"family":"Glaser","given":"Linda","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":580601,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70158921,"text":"fs12399 - 1999 - A global digital elevation model - GTOP030","interactions":[],"lastModifiedDate":"2015-10-22T09:35:18","indexId":"fs12399","displayToPublicDate":"2015-05-04T08:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"123-99","title":"A global digital elevation model - GTOP030","docAbstract":"<p>GTOP030, the U.S. Geological Survey's (USGS) digital elevation model (DEM) of the Earth, provides the flrst global coverage of moderate resolution elevation data. &nbsp;The original GTOP30 data set, which was developed over a 3-year period through a collaborative effort led by the USGS, was completed in 1996 at the USGS EROS Data Center in Sioux Falls, South Dakota. &nbsp;The collaboration involved contributions of staffing, funding, or source data from cooperators including the National Aeronautics and Space Administration (NASA), the United Nations Environment Programme Global Resource Information Database (UNEP/GRID), the U.S. Agency for International Development (USAID), the Instituto Nacional de Estadistica Geografia e Informatica (INEGI) of Mexico, the Geographical Survey Institute (GSI) of Japan, Manaaki Whenua&nbsp;Landcare Research of New Zealand, and the Scientific Committee on Antarctic Research (SCAR). In 1999, work was begun on an update to the GTOP030 data set. Additional data sources are being incorporated into GTOP030 with an enhanced and improved data set planned for release in 2000.</p>","language":"English","publisher":"U.S. Geological Survey","doi":"10.3133/fs12399","usgsCitation":"U.S. Geological Survey, 1999, A global digital elevation model - GTOP030: U.S. Geological Survey Fact Sheet 123-99, 2 p., https://doi.org/10.3133/fs12399.","productDescription":"2 p.","numberOfPages":"2","onlineOnly":"N","additionalOnlineFiles":"N","costCenters":[],"links":[{"id":309716,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/fs12399.jpg"},{"id":310339,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/1999/0123/report.pdf","text":"Report","linkFileType":{"id":1,"text":"pdf"}}],"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5616422fe4b0ba4884c61472"}
,{"id":70073909,"text":"70073909 - 1999 - Coal-fired power generaion, new air quality regulations, and future U.S. coal production","interactions":[],"lastModifiedDate":"2014-01-23T14:30:05","indexId":"70073909","displayToPublicDate":"2014-01-01T14:24:11","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1541,"text":"Environmental Geosciences","active":true,"publicationSubtype":{"id":10}},"title":"Coal-fired power generaion, new air quality regulations, and future U.S. coal production","docAbstract":"Tighter new regulation of stack gas emissions and competition in power generation are driving electrical utilities to demand cleaner, lower sulfur coal. Historical data on sulfur content of produced coals shows little variability in coal quality for individual mines and individual coal-producing counties over relatively long periods of time. If coal-using power generators follow the compliance patterns established in Phase I of the 1990 Clean Air Act Amendments, then the industry's response to the tighter Phase II emissions standards will result in large amounts of coal production shifting from higher sulfur areas to areas with lower cost low sulfur coal. One reason this shift will likely occur is that currently only 30% of U.S. coal-fired electrical generating capacity is equipped with flue-gas scrubbers. In 1995, coal mines in the higher sulfur areas of the Illinois Basin and Northern and Central Appalachia employed 78% of all coal miners (>70,000 miners). A substantial geographical redistribution of the nation's coal supplies will likely lead to economic dislocations that will reach beyond local coal-producing areas.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Environmental Geosciences","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Wiley","usgsCitation":"Attanasi, E.D., and Root, D.H., 1999, Coal-fired power generaion, new air quality regulations, and future U.S. coal production: Environmental Geosciences, v. 6, no. 3, p. 139-145.","productDescription":"7 p.","startPage":"139","endPage":"145","costCenters":[],"links":[{"id":281426,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"6","issue":"3","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"53cd51b0e4b0b290850f40d6","contributors":{"authors":[{"text":"Attanasi, E. D. 0000-0001-6845-7160","orcid":"https://orcid.org/0000-0001-6845-7160","contributorId":107672,"corporation":false,"usgs":true,"family":"Attanasi","given":"E.","middleInitial":"D.","affiliations":[],"preferred":false,"id":489188,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Root, D. H.","contributorId":74019,"corporation":false,"usgs":true,"family":"Root","given":"D.","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":489187,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70045671,"text":"70045671 - 1999 - Exploration","interactions":[],"lastModifiedDate":"2013-04-29T09:22:45","indexId":"70045671","displayToPublicDate":"2013-01-01T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2755,"text":"Mining Engineering","active":true,"publicationSubtype":{"id":10}},"title":"Exploration","docAbstract":"This summary of international nonfuel mineral exploration activities for 1998 draws on available data from literature, industry and US Geological Survey (USGS) specialists. Data on exploration budgets by region and commodity are reported, significant mineral discoveries and exploration target areas are identified and government programs affecting the mineral exploration industry are discussed. Inferences and observations on mineral industry direction are drawn from these data and discussions.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Mining Engineering","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"SME","usgsCitation":"Wilburn, D., and Porter, K., 1999, Exploration: Mining Engineering, v. 51, no. 5, p. 39-49.","productDescription":"11 p.","startPage":"39","endPage":"49","costCenters":[{"id":432,"text":"National Minerals Information Center","active":true,"usgs":true}],"links":[{"id":271600,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"51","issue":"5","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"517f9666e4b0e41721f7a345","contributors":{"authors":[{"text":"Wilburn, D.R.","contributorId":98911,"corporation":false,"usgs":true,"family":"Wilburn","given":"D.R.","email":"","affiliations":[],"preferred":false,"id":478019,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Porter, K.E.","contributorId":84242,"corporation":false,"usgs":true,"family":"Porter","given":"K.E.","email":"","affiliations":[],"preferred":false,"id":478018,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70006459,"text":"70006459 - 1999 - Hazard evaluation of ten organophosphorous insecticides against the midge, <i>Chironomus riparius via</i> QSAR","interactions":[],"lastModifiedDate":"2012-12-06T23:02:17","indexId":"70006459","displayToPublicDate":"2012-01-01T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3316,"text":"SAR and QSAR in Environmental Research","active":true,"publicationSubtype":{"id":10}},"title":"Hazard evaluation of ten organophosphorous insecticides against the midge, <i>Chironomus riparius via</i> QSAR","docAbstract":"Toxicities of ten organophosphorus (OP) insecticides were measured against midge larvae (Chironomus riparius) under varying temperature (11, 18, and 25°C) and pH (6, 7, and 8) conditions and with and without sediment. Toxicity usually increased with increasing temperature and was greater in the absence of sediment. No trend was found with varying pH. A series of unidimensional parameters and multidimensional models were used to describe the changes in toxicity. Log <i>K</i><sub>ow</sub> was able to explain about 40–60% of the variability in response data for aqueous exposures while molecular volume and aqueous solubility were less predictive. Likewise, the linear solvation energy relationship (LSER) model only explained 40–70% of the response variability, suggesting that factors other than solubility were most important for producing the observed response. Molecular connectivity was the most useful for describing the variability in the response. In the absence of sediment, <sup>1</sup>χ<sup><i>v</i></sup> and <sup>3</sup>κ were best able to describe the variation in response among all compounds at each pH (70–90%). In the presence of sediment, even molecular connectivity could not describe the variability until the partitioning potential to sediment was accounted for by assuming equilibrium partitioning. After correcting for partitioning, the same molecular connectivity terms as in the aqueous exposures described most of the variability, 61–87%, except for the 11°C data where correlations were not significant. Molecular connectivity was a better tool than LSER or the unidimensional variables to explain the steric fitness of OP insecticides which was crucial to the toxicity.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"SAR and QSAR in Environmental Research","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Wiley","publisherLocation":"Hoboken, NJ","doi":"10.1080/10629369908039110","usgsCitation":"Landrum, P.F., Fisher, S.W., Hwang, H., and Hickey, J.P., 1999, Hazard evaluation of ten organophosphorous insecticides against the midge, <i>Chironomus riparius via</i> QSAR: SAR and QSAR in Environmental Research, v. 10, no. 5, p. 423-450, https://doi.org/10.1080/10629369908039110.","productDescription":"28 p.","startPage":"423","endPage":"450","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":263572,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":263571,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1080/10629369908039110"}],"volume":"10","issue":"5","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"50bd1380e4b069d93eefc4dc","contributors":{"authors":[{"text":"Landrum, Peter F.","contributorId":20688,"corporation":false,"usgs":true,"family":"Landrum","given":"Peter","email":"","middleInitial":"F.","affiliations":[],"preferred":false,"id":354553,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fisher, Susan W.","contributorId":76201,"corporation":false,"usgs":true,"family":"Fisher","given":"Susan","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":354554,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hwang, Haejo","contributorId":13116,"corporation":false,"usgs":true,"family":"Hwang","given":"Haejo","email":"","affiliations":[],"preferred":false,"id":354552,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hickey, James P.","contributorId":83460,"corporation":false,"usgs":true,"family":"Hickey","given":"James","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":354555,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70005353,"text":"70005353 - 1999 - Primary Aluminum Plants Worldwide - 1998","interactions":[],"lastModifiedDate":"2012-02-02T00:15:56","indexId":"70005353","displayToPublicDate":"2011-09-08T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":6,"text":"USGS Unnumbered Series"},"title":"Primary Aluminum Plants Worldwide - 1998","docAbstract":"The 1990 U.S. Bureau of Mines publication, Primary Aluminum Plants Worldwide, has been updated and is now available. The 1998 USGS edition of Primary Aluminum Plants Worldwide is published in two parts. Part I&mdash;Detail contains information on individual primary smelter capacity, location, ownership, sources of energy, and other miscellaneous information. Part II&mdash;Summary summarizes the capacity data by country","language":"English","publisher":"U.S. Geological Survey","doi":"10.3133/70005353","usgsCitation":"U.S. Geological Survey, 1999, Primary Aluminum Plants Worldwide - 1998, https://doi.org/10.3133/70005353.","costCenters":[],"links":[{"id":203889,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/usgs_thumb.jpg"},{"id":92191,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://minerals.usgs.gov/minerals/pubs/commodity/aluminum/alplants.html","linkFileType":{"id":5,"text":"html"}}],"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a91e4b07f02db65655c"}
,{"id":70005239,"text":"wdrNJ981 - 1999 - Water Resources Data: New Jersey, Water Year 1998, Volume 1, Surface-Water Data","interactions":[],"lastModifiedDate":"2014-07-17T09:39:52","indexId":"wdrNJ981","displayToPublicDate":"2011-08-22T00:00:00","publicationYear":"1999","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":340,"text":"Water Data Report","code":"WDR","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"NJ-98-1","title":"Water Resources Data: New Jersey, Water Year 1998, Volume 1, Surface-Water Data","docAbstract":"This volume of the annual hydrologic data report of New Jersey is one of a series of annual reports that document hydrologic data gathered from the U.S. Geological Survey's surface- and ground-water data-collection networks in each State, Puerto Rico, and the Trust Territories. These records of streamflow, ground-water levels, and water quality provide the hydrologic information needed by state, local and federal agencies, and the private sector for developing and managing our Nation's land and water resources.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/wdrNJ981","collaboration":"Prepared in coooperation with the New Jersey Department of Environmental Protection and with other agencies","usgsCitation":"Reed, T., Centinaro, G., Dudek, J., Corcino, V., Stekroadt, G., and McTigure, R., 1999, Water Resources Data: New Jersey, Water Year 1998, Volume 1, Surface-Water Data: U.S. Geological Survey Water Data Report NJ-98-1, xx, 281 p., https://doi.org/10.3133/wdrNJ981.","productDescription":"xx, 281 p.","costCenters":[{"id":470,"text":"New Jersey Water Science Center","active":true,"usgs":true}],"links":[{"id":121120,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/wdr_nj_98_1.gif"},{"id":91777,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/wdr/1998/nj-98-1/","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"New Jersey","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -75.58333333333333,38.916666666666664 ], [ -75.58333333333333,41.35055555555556 ], [ -73.88416666666667,41.35055555555556 ], [ -73.88416666666667,38.916666666666664 ], [ -75.58333333333333,38.916666666666664 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a0de4b07f02db5fd32b","contributors":{"authors":[{"text":"Reed, T.J. 0000-0002-9943-4081","orcid":"https://orcid.org/0000-0002-9943-4081","contributorId":15224,"corporation":false,"usgs":true,"family":"Reed","given":"T.J.","email":"","affiliations":[],"preferred":false,"id":352121,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Centinaro, G.L.","contributorId":61892,"corporation":false,"usgs":true,"family":"Centinaro","given":"G.L.","email":"","affiliations":[],"preferred":false,"id":352124,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Dudek, J.F.","contributorId":31818,"corporation":false,"usgs":true,"family":"Dudek","given":"J.F.","email":"","affiliations":[],"preferred":false,"id":352123,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Corcino, V.","contributorId":28653,"corporation":false,"usgs":true,"family":"Corcino","given":"V.","email":"","affiliations":[],"preferred":false,"id":352122,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Stekroadt, G.C.","contributorId":106249,"corporation":false,"usgs":true,"family":"Stekroadt","given":"G.C.","email":"","affiliations":[],"preferred":false,"id":352126,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"McTigure, R.C.","contributorId":104203,"corporation":false,"usgs":true,"family":"McTigure","given":"R.C.","email":"","affiliations":[],"preferred":false,"id":352125,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":5223973,"text":"5223973 - 1999 - The effectiveness of tape playbacks in estimating Black Rail densities","interactions":[],"lastModifiedDate":"2024-07-25T00:29:13.565032","indexId":"5223973","displayToPublicDate":"2010-06-16T12:18:55","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2508,"text":"Journal of Wildlife Management","active":true,"publicationSubtype":{"id":10}},"title":"The effectiveness of tape playbacks in estimating Black Rail densities","docAbstract":"Tape playback is often the only efficient technique to survey for secretive birds.  We measured the vocal responses and movements of radio-tagged black rails (Laterallus jamaicensis; 26 M, 17 F) to playback of vocalizations at 2 sites in Florida during the breeding seasons of 1992-95.  We used coefficients from logistic regression equations to model probability of a response conditional to the birds' sex. nesting status, distance to playback source, and time of survey.  With a probability of 0.811, nonnesting male black rails were ))lost likely to respond to playback, while nesting females were the least likely to respond (probability = 0.189).  We used linear regression to determine daily, monthly and annual variation in response from weekly playback surveys along a fixed route during the breeding seasons of 1993-95.  Significant sources of variation in the regression model were month (F3.48 = 3.89, P = 0.014), year (F2.48 = 9.37, P < 0.001), temperature (F1.48 = 5.44, P = 0.024), and month X year (F5.48 = 2.69, P = 0.031).  The model was highly significant (P < 0.001) and explained 54% of the variation of mean response per survey period (r2 = 0.54).  We combined response probability data from radiotagged black rails with playback survey route data to provide a density estimate of 0.25 birds/ha for the St. Johns National Wildlife Refuge.  The relation between the number of black rails heard during playback surveys to the actual number present was influenced by a number of variables.  We recommend caution when making density estimates from tape playback surveys","language":"English","publisher":"Wildlife Society","doi":"10.2307/3802492","usgsCitation":"Legare, M., Eddleman, W., Buckley, P.A., and Kelly, C., 1999, The effectiveness of tape playbacks in estimating Black Rail densities: Journal of Wildlife Management, v. 63, no. 1, p. 116-125, https://doi.org/10.2307/3802492.","productDescription":"10 p.","startPage":"116","endPage":"125","numberOfPages":"10","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":200200,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"63","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a0ae4b07f02db5fb7b1","contributors":{"authors":[{"text":"Legare, M.","contributorId":44640,"corporation":false,"usgs":true,"family":"Legare","given":"M.","email":"","affiliations":[],"preferred":false,"id":340102,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Eddleman, W.R.","contributorId":49487,"corporation":false,"usgs":true,"family":"Eddleman","given":"W.R.","email":"","affiliations":[],"preferred":false,"id":340103,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Buckley, P. A.","contributorId":69264,"corporation":false,"usgs":true,"family":"Buckley","given":"P.","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":340104,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kelly, C.","contributorId":34625,"corporation":false,"usgs":true,"family":"Kelly","given":"C.","email":"","affiliations":[],"preferred":false,"id":340101,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":5223876,"text":"5223876 - 1999 - Estimating transition probabilities in unmarked populations: Entropy revisited","interactions":[],"lastModifiedDate":"2023-09-20T00:42:46.384221","indexId":"5223876","displayToPublicDate":"2010-06-16T12:18:55","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1052,"text":"Bird Study","active":true,"publicationSubtype":{"id":10}},"title":"Estimating transition probabilities in unmarked populations: Entropy revisited","docAbstract":"The probability of surviving and moving between 'states' is of great interest to biologists.  Robust estimation of these transitions using multiple observations of individually identifiable marked individuals has received considerable attention in recent years.  However, in some situations, individuals are not identifiable (or have a very low recapture rate), although all individuals in a sample can be assigned to a particular state (e.g. breeding or non-breeding) without error.  In such cases, only aggregate data (number of individuals in a given state at each occasion) are available.  If the underlying matrix of transition probabilities does not vary through time and aggregate data are available for several time periods, then it is possible to estimate these parameters using least-squares methods.  Even when such data are available, this assumption of stationarity will usually be deemed overly restrictive and, frequently, data will only be available for two time periods.  In these cases, the problem reduces to estimating the most likely matrix (or matrices) leading to the observed frequency distribution of individuals in each state.  An entropy maximization approach has been previously suggested.  In this paper, we show that the entropy approach rests on a particular limiting assumption, and does not provide estimates of latent population parameters (the transition probabilities), but rather predictions of realized rates.","language":"English","publisher":"Taylor & Francis","doi":"10.1080/00063659909477232","usgsCitation":"Cooch, E., and Link, W., 1999, Estimating transition probabilities in unmarked populations: Entropy revisited: Bird Study, v. 46, no. S, p. S55-S61, https://doi.org/10.1080/00063659909477232.","productDescription":"7 p.","startPage":"S55","endPage":"S61","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":479382,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/00063659909477232","text":"Publisher Index Page"},{"id":201586,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"46","issue":"S","noUsgsAuthors":false,"publicationDate":"2009-06-25","publicationStatus":"PW","scienceBaseUri":"4f4e4a0be4b07f02db5fbff0","contributors":{"authors":[{"text":"Cooch, E.G.","contributorId":40932,"corporation":false,"usgs":true,"family":"Cooch","given":"E.G.","email":"","affiliations":[],"preferred":false,"id":339796,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Link, W.A. 0000-0002-9913-0256","orcid":"https://orcid.org/0000-0002-9913-0256","contributorId":8815,"corporation":false,"usgs":true,"family":"Link","given":"W.A.","affiliations":[],"preferred":false,"id":339795,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":5223864,"text":"5223864 - 1999 - Does nonrandom nest placement imply nonrandom nest predation?: A reply","interactions":[],"lastModifiedDate":"2023-11-20T13:17:15.793875","indexId":"5223864","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1318,"text":"Condor","active":true,"publicationSubtype":{"id":10}},"title":"Does nonrandom nest placement imply nonrandom nest predation?: A reply","docAbstract":"In response to the critique by Schmidt and Whelan (Condor 101(4):916-920, 1999), we find that the relationship between nest success and tree selectivity is dependent upon inclusion or exclusion of particular tree species, whether or not years are pooled, and the selectivity index used.  We question their use of point estimates of nest success with extremely high variances, defend our index, question the application of the Chesson (1983) index to our data, and explain the need to analyze years separately.  Bottomland hardwood forest systems are extremely variable; hydroperiods alter the suitability of nesting substrates, availability of alternative food, and behavior of predators and their prey.  Given these features, actively searching for Acadian Flycatcher (Empidonax virescens) nests is seldom an efficient predator foraging strategy.  Therefore, these predation events are best described as random; nests are principally encountered opportunistically by generalist predators while searching for other prey.","language":"English","publisher":"Oxford Academic","doi":"10.2307/1370090","usgsCitation":"Cooper, R., Wilson, R., Zenitsky, G., Mullin, S., Dececco, J., Marshall, M., Wolf, D., and Pomara, L.Y., 1999, Does nonrandom nest placement imply nonrandom nest predation?: A reply: Condor, v. 101, no. 4, p. 920-923, https://doi.org/10.2307/1370090.","productDescription":"4 p.","startPage":"920","endPage":"923","numberOfPages":"4","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":479385,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.2307/1370090","text":"Publisher Index Page"},{"id":202009,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.er.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"101","issue":"4","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a61e4b07f02db635efa","contributors":{"authors":[{"text":"Cooper, R.J.","contributorId":89077,"corporation":false,"usgs":true,"family":"Cooper","given":"R.J.","email":"","affiliations":[],"preferred":false,"id":339752,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wilson, R.R.","contributorId":12138,"corporation":false,"usgs":true,"family":"Wilson","given":"R.R.","email":"","affiliations":[],"preferred":false,"id":339746,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Zenitsky, G.D.","contributorId":12599,"corporation":false,"usgs":true,"family":"Zenitsky","given":"G.D.","email":"","affiliations":[],"preferred":false,"id":339747,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mullin, S.J.","contributorId":100506,"corporation":false,"usgs":true,"family":"Mullin","given":"S.J.","email":"","affiliations":[],"preferred":false,"id":339753,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dececco, J.D.","contributorId":43892,"corporation":false,"usgs":true,"family":"Dececco","given":"J.D.","email":"","affiliations":[],"preferred":false,"id":339750,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Marshall, M.R.","contributorId":82427,"corporation":false,"usgs":true,"family":"Marshall","given":"M.R.","email":"","affiliations":[],"preferred":false,"id":339751,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Wolf, D.J.","contributorId":25271,"corporation":false,"usgs":true,"family":"Wolf","given":"D.J.","email":"","affiliations":[],"preferred":false,"id":339749,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Pomara, Lars Y.","contributorId":22072,"corporation":false,"usgs":true,"family":"Pomara","given":"Lars","email":"","middleInitial":"Y.","affiliations":[],"preferred":false,"id":339748,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":5223851,"text":"5223851 - 1999 - Contribution of research to management and recovery of the roseate tern: review of a twelve-year project","interactions":[],"lastModifiedDate":"2012-02-02T00:15:41","indexId":"5223851","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3731,"text":"Waterbirds","onlineIssn":"19385390","printIssn":"15244695","active":true,"publicationSubtype":{"id":10}},"title":"Contribution of research to management and recovery of the roseate tern: review of a twelve-year project","docAbstract":"The Northwest Atlantic population of the Roseate Tern (Sterna dougallii) is largely confined to a small breeding area along the northeast coast of the USA between 40? and 42?N.  This population was listed as endangered in the USA in 1987 because it was dangerously concentrated into a few breeding sites (85% on two islands in the 1980s).  The nesting population in the area from Long Island, New York to Cape Cod, Massachusetts has been studied intensively since 1987, in conjunction with a program of management of the breeding colonies.  This paper summarizes the results of the research program and discusses the extent to which it has contributed to effective management. The regional population now numbers about 4,000 breeding pairs and has been increasing slowly since 1987, except between 1991 and 1992 when it declined by about 17%.  This decline was probably caused by Hurricane `Bob' in August 1991.  Roseate Terns have specialized foraging habits and are concentrated into a small number of foraging areas near the nesting colonies.  The historically important breeding sites were taken over by large gulls between 1930 and 1972.  Many of the terns moved to less suitable sites near the mainland, where they are subject to predation by mainland-based predators.  Despite this, Roseate Terns breed with high success at many sites.  The sex-ratio is skewed towards females; about 12% of nests are attended by female-female pairs.  The annual adult survival rate (0.83) is unusually low for a seabird.  Most mortality occurs away from the breeding grounds, but the winter quarters remained unknown until one roost site was found in Brazil in 1995-1997.  A major management goal has been to restore former colony-sites by eliminating nesting gulls, but the success of some of these projects has been questionable because they may have attracted birds to sites with higher levels of predation.  Although the research has yielded important information about the biology and demography of the species, it has taken longer than expected to obtain and analyze data from multiple sites on this long-lived species.  Most work has been carried out at breeding sites: critical studies on feeding ecology and winter ecology have been hampered by insufficient funding and the paucity of self-motivated biologists.  Hence, the program has not yet provided all the keys to restoring the population.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Waterbirds","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","collaboration":"5355_Nisbet.pdf","usgsCitation":"Nisbet, I., and Spendelow, J., 1999, Contribution of research to management and recovery of the roseate tern: review of a twelve-year project: Waterbirds, v. 22, no. 2, p. 239-252.","productDescription":"239-252","startPage":"239","endPage":"252","numberOfPages":"14","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":17497,"rank":200,"type":{"id":11,"text":"Document"},"url":"https://www.jstor.org/stable/1522212","linkFileType":{"id":5,"text":"html"}},{"id":200355,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"22","issue":"2","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4af3e4b07f02db691991","contributors":{"authors":[{"text":"Nisbet, I.C.T.","contributorId":54942,"corporation":false,"usgs":true,"family":"Nisbet","given":"I.C.T.","email":"","affiliations":[],"preferred":false,"id":339705,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Spendelow, J. A. 0000-0001-8167-0898","orcid":"https://orcid.org/0000-0001-8167-0898","contributorId":72478,"corporation":false,"usgs":true,"family":"Spendelow","given":"J. A.","affiliations":[],"preferred":false,"id":339706,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":5223855,"text":"5223855 - 1999 - Quantitative studies of bird movement: A methodological review","interactions":[],"lastModifiedDate":"2023-09-20T02:32:27.801269","indexId":"5223855","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1052,"text":"Bird Study","active":true,"publicationSubtype":{"id":10}},"title":"Quantitative studies of bird movement: A methodological review","docAbstract":"The past several years have seen development of a number of statistical models and methods for drawing inferences about bird movement using data from marked individuals.  It can be difficult to keep up with this rapid development of new methods, so our purpose here is to categorize and review methods for drawing inferences about avian movement.  We also outline recommendations about future work dealing both with methods development and actual studies directed at hypotheses about bird movement of interest from conservation, management, or ecological perspectives.","language":"English","publisher":"Taylor & Francis","doi":"10.1080/00063659909477256","usgsCitation":"Nichols, J., and Kaiser, A., 1999, Quantitative studies of bird movement: A methodological review: Bird Study, v. 46, no. S, p. S289-S298, https://doi.org/10.1080/00063659909477256.","productDescription":"10 p.","startPage":"S289","endPage":"S298","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":199468,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"46","issue":"S","noUsgsAuthors":false,"publicationDate":"2009-06-25","publicationStatus":"PW","scienceBaseUri":"4f4e4a82e4b07f02db64ae09","contributors":{"authors":[{"text":"Nichols, J.D. 0000-0002-7631-2890","orcid":"https://orcid.org/0000-0002-7631-2890","contributorId":14332,"corporation":false,"usgs":true,"family":"Nichols","given":"J.D.","affiliations":[],"preferred":false,"id":339723,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kaiser, A.","contributorId":90424,"corporation":false,"usgs":true,"family":"Kaiser","given":"A.","email":"","affiliations":[],"preferred":false,"id":339724,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":5223856,"text":"5223856 - 1999 - COMDYN: Software to study the dynamics of animal communities using a capture-recapture approach","interactions":[],"lastModifiedDate":"2023-09-20T02:21:28.769637","indexId":"5223856","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1052,"text":"Bird Study","active":true,"publicationSubtype":{"id":10}},"title":"COMDYN: Software to study the dynamics of animal communities using a capture-recapture approach","docAbstract":"COMDYN is a set of programs developed for estimation of parameters associated with community dynamics using count data from two locations or time periods.  It is Internet-based, allowing remote users either to input their own data, or to use data from the North American Breeding Bird Survey for analysis.  COMDYN allows probability of detection to vary among species and among locations and time periods.  The basic estimator for species richness underlying all estimators is the jackknife estimator proposed by Burnham and Overton.  Estimators are presented for quantities associated with temporal change in species richness, including rate of change in species richness over time, local extinction probability, local species turnover and number of local colonizing species.  Estimators are also presented for quantities associated with spatial variation in species richness, including relative richness at two locations and proportion of species present in one location that are also present at a second location.  Application of the estimators to species richness estimation has been previously described and justified.  The potential applications of these programs are discussed.","language":"English","publisher":"Taylor & Francis","doi":"10.1080/00063659909477247","usgsCitation":"Hines, J., Boulinier, T., Nichols, J., Sauer, J., and Pollock, K.H., 1999, COMDYN: Software to study the dynamics of animal communities using a capture-recapture approach: Bird Study, v. 46, no. S, p. S209-S217, https://doi.org/10.1080/00063659909477247.","productDescription":"19 p.","startPage":"S209","endPage":"S217","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":479395,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/00063659909477247","text":"Publisher Index Page"},{"id":199469,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"46","issue":"S","noUsgsAuthors":false,"publicationDate":"2009-06-25","publicationStatus":"PW","scienceBaseUri":"4f4e4a07e4b07f02db5f9830","contributors":{"authors":[{"text":"Hines, J.E. 0000-0001-5478-7230","orcid":"https://orcid.org/0000-0001-5478-7230","contributorId":36885,"corporation":false,"usgs":true,"family":"Hines","given":"J.E.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":339726,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Boulinier, T.","contributorId":37845,"corporation":false,"usgs":true,"family":"Boulinier","given":"T.","email":"","affiliations":[],"preferred":false,"id":339727,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Nichols, J.D. 0000-0002-7631-2890","orcid":"https://orcid.org/0000-0002-7631-2890","contributorId":14332,"corporation":false,"usgs":true,"family":"Nichols","given":"J.D.","affiliations":[],"preferred":false,"id":339725,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sauer, J.R. 0000-0002-4557-3019","orcid":"https://orcid.org/0000-0002-4557-3019","contributorId":66197,"corporation":false,"usgs":true,"family":"Sauer","given":"J.R.","affiliations":[],"preferred":false,"id":339729,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Pollock, K. H.","contributorId":65184,"corporation":false,"usgs":false,"family":"Pollock","given":"K.","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":339728,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":5223859,"text":"5223859 - 1999 - Program RDSURVIV: An estimation tool for capture-recapture data collected under Pollock's robust design","interactions":[],"lastModifiedDate":"2023-09-20T01:02:47.527685","indexId":"5223859","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1052,"text":"Bird Study","active":true,"publicationSubtype":{"id":10}},"title":"Program RDSURVIV: An estimation tool for capture-recapture data collected under Pollock's robust design","docAbstract":"<p><span>Several papers have demonstrated the advantages of collecting capture- recapture data using subsamples (i.e. Pollock's robust design). Compared with a standard design (i.e. one sample per period), this approach (1) permits the estimation of more demographic parameters and (2) in many cases produces more efficient estimators. Program SURVIV is a powerful tool for computing parameter estimates under the robust design. However, multinomial models developed for the robust design require cells for each possible capture history that occurs across the subsamples within a period. This makes the process of entering cell probabilities in SURVIV¸ very tedious and subject to errors. Program RDSURvIv combines SURVIV with a front end that converts capture histories taken under the robust design to the proper input format for estimating parameters under a general model, and builds that model. This model permits Markovian temporary emigration, trap response in capture probabilities and time variation in all parameters. Program RDSURVIV also automatically computes estimates under a series of submodels, but also permits the user to specify other submodels.</span></p>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/00063659909477229","usgsCitation":"Kendall, W., and Hines, J., 1999, Program RDSURVIV: An estimation tool for capture-recapture data collected under Pollock's robust design: Bird Study, v. 46, no. S, p. S32-S38, https://doi.org/10.1080/00063659909477229.","productDescription":"7 p.","startPage":"S32","endPage":"S38","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":479387,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/00063659909477229","text":"Publisher Index Page"},{"id":202275,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"46","issue":"S","noUsgsAuthors":false,"publicationDate":"2009-06-25","publicationStatus":"PW","scienceBaseUri":"4f4e4a8be4b07f02db6517cc","contributors":{"authors":[{"text":"Kendall, W. L. 0000-0003-0084-9891","orcid":"https://orcid.org/0000-0003-0084-9891","contributorId":32880,"corporation":false,"usgs":true,"family":"Kendall","given":"W. L.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":339738,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hines, J.E. 0000-0001-5478-7230","orcid":"https://orcid.org/0000-0001-5478-7230","contributorId":36885,"corporation":false,"usgs":true,"family":"Hines","given":"J.E.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":339739,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":5224554,"text":"5224554 - 1999 - Large-scale studies of marked birds in North America","interactions":[],"lastModifiedDate":"2023-09-20T00:56:12.231534","indexId":"5224554","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1052,"text":"Bird Study","active":true,"publicationSubtype":{"id":10}},"title":"Large-scale studies of marked birds in North America","docAbstract":"The first large-scale, co-operative, studies of marked birds in North America were attempted in the 1950s.  Operation Recovery, which linked numerous ringing stations along the east coast in a study of autumn migration of passerines, and the Preseason Duck Ringing Programme in prairie states and provinces, conclusively demonstrated the feasibility of large-scale projects.  The subsequent development of powerful analytical models and computing capabilities expanded the quantitative potential for further large-scale projects.  Monitoring Avian Productivity and Survivorship, and Adaptive Harvest Management are current examples of truly large-scale programmes.  Their exemplary success and the availability of versatile analytical tools are driving changes in the North American bird ringing programme.  Both the US and Canadian ringing offices are modifying operations to collect more and better data to facilitate large-scale studies and promote a more project-oriented ringing programme.  New large-scale programmes such as the Cornell Nest Box Network are on the horizon.","language":"English","publisher":"Taylor & Francis","doi":"10.1080/00063659909477254","usgsCitation":"Tautin, J., Metras, L., and Smith, G.W., 1999, Large-scale studies of marked birds in North America: Bird Study, v. 46, no. S, p. S271-S278, https://doi.org/10.1080/00063659909477254.","productDescription":"8 p.","startPage":"S271","endPage":"S278","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":479390,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/00063659909477254","text":"Publisher Index Page"},{"id":196056,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"otherGeospatial":"North 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America\"}}]}","volume":"46","issue":"S","noUsgsAuthors":false,"publicationDate":"2009-06-25","publicationStatus":"PW","scienceBaseUri":"4f4e49fbe4b07f02db5f49d3","contributors":{"authors":[{"text":"Tautin, John","contributorId":113586,"corporation":false,"usgs":true,"family":"Tautin","given":"John","email":"","affiliations":[],"preferred":false,"id":341960,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Metras, L.","contributorId":59915,"corporation":false,"usgs":true,"family":"Metras","given":"L.","email":"","affiliations":[],"preferred":false,"id":883440,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Smith, Graham W.","contributorId":63088,"corporation":false,"usgs":true,"family":"Smith","given":"Graham","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":883441,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":5223874,"text":"5223874 - 1999 - Effects of landscape composition and wetland fragmentation on frog and toad abundance and species richness in Iowa and Wisconsin, USA","interactions":[],"lastModifiedDate":"2023-11-13T11:56:31.382607","indexId":"5223874","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1321,"text":"Conservation Biology","active":true,"publicationSubtype":{"id":10}},"title":"Effects of landscape composition and wetland fragmentation on frog and toad abundance and species richness in Iowa and Wisconsin, USA","docAbstract":"<p><span>Management of amphibian populations to reverse recent declines will require defining high-quality habitat for individual species or groups of species, followed by efforts to retain or restore these habitats on the landscape. We examined landscape-level habitat relationships for frogs and toads by measuring associations between relative abundance and species richness based on survey data derived from anuran calls and features of land-cover maps for Iowa and Wisconsin. The most consistent result across all anuran guilds was a negative association with the presence of urban land. Upland and wetland forests and emergent wetlands tended to be positively associated with anurans. Landscape metrics that represent edges and patch diversity also had generally positive associations, indicating that anurans benefit from a complex of habitats that include wetlands. In Iowa the most significant associations with relative abundance were the length of the edge between wetland and forest ( positive) and the presence of urban land (negative). In Wisconsin the two most significant associations with relative abundance were forest area and agricultural area ( both positive). Anurans had positive associations with agriculture in Wisconsin but not in Iowa. Remnant forest patches in agricultural landscapes may be providing refuges for some anuran species. Differences in anuran associations with deep water and permanent wetlands between the two states suggest opportunities for management action. Large-scale maps can contribute to predictive models of amphibian habitat use, but water quality and vegetation information collected from individual wetlands will likely be needed to strengthen those predictions. Landscape habitat analyses provide a framework for future experimental and intensive research on specific factors affecting the health of anurans.</span></p>","language":"English","publisher":"Wiley","doi":"10.1046/j.1523-1739.1999.98445.x","usgsCitation":"Knutson, M.G., Sauer, J., Olsen, D., Mossman, M., Hemesath, L., and Lannoo, M., 1999, Effects of landscape composition and wetland fragmentation on frog and toad abundance and species richness in Iowa and Wisconsin, USA: Conservation Biology, v. 13, no. 6, p. 1437-1446, https://doi.org/10.1046/j.1523-1739.1999.98445.x.","productDescription":"10 p.","startPage":"1437","endPage":"1446","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":200271,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Iowa, 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G.","contributorId":55375,"corporation":false,"usgs":false,"family":"Knutson","given":"M.","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":339789,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sauer, J.R. 0000-0002-4557-3019","orcid":"https://orcid.org/0000-0002-4557-3019","contributorId":66197,"corporation":false,"usgs":true,"family":"Sauer","given":"J.R.","affiliations":[],"preferred":false,"id":339790,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Olsen, D.A.","contributorId":10377,"corporation":false,"usgs":true,"family":"Olsen","given":"D.A.","email":"","affiliations":[],"preferred":false,"id":339785,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mossman, M.J.","contributorId":54946,"corporation":false,"usgs":true,"family":"Mossman","given":"M.J.","email":"","affiliations":[],"preferred":false,"id":339788,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hemesath, L.M.","contributorId":44502,"corporation":false,"usgs":true,"family":"Hemesath","given":"L.M.","email":"","affiliations":[],"preferred":false,"id":339787,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Lannoo, M.J.","contributorId":17937,"corporation":false,"usgs":true,"family":"Lannoo","given":"M.J.","email":"","affiliations":[],"preferred":false,"id":339786,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":5223858,"text":"5223858 - 1999 - Development and application of a mark-recapture model incorporating predicted sex and transitory behaviour","interactions":[],"lastModifiedDate":"2023-09-20T01:08:54.070153","indexId":"5223858","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1052,"text":"Bird Study","active":true,"publicationSubtype":{"id":10}},"title":"Development and application of a mark-recapture model incorporating predicted sex and transitory behaviour","docAbstract":"We developed an extension of Cormack-Jolly-Seber models to handle a complex mark-recapture problem in which (a) the sex of birds cannot be determined prior to first moult, but can be predicted on the basis of body measurements, and (b) a significant portion of captured birds appear to be transients (i.e. are captured once but leave the area or otherwise become ' untrappable').  We applied this methodology to a data set of 4184 serins (Serinus serinus) trapped in northeastern Spain during 1985-96, in order to investigate age-, sex-, and time-specific variation in survival rates.  Using this approach, we were able to successfully incorporate the majority of ringings of serins.  Had we eliminated birds not previously captured (as has been advocated to avoid the problem of transience) we would have reduced our sample sizes by >2000 releases.  In addition, we were able to include 1610 releases of birds of unknown (but predicted) sex; these data contributed to the precision of our estimates and the power of statistical tests.  We discuss problems with data structure, encoding of the algorithms to compute parameter estimates, model selection, identifiability of parameters, and goodness-of-fit, and make recommendations for the design and analysis of future studies facing similar problems.","language":"English","publisher":"Taylor & Francis","doi":"10.1080/00063659909477233","usgsCitation":"Conroy, M., Senar, J., Hines, J., and Domenech, J., 1999, Development and application of a mark-recapture model incorporating predicted sex and transitory behaviour: Bird Study, v. 46, no. S, p. S62-S73, https://doi.org/10.1080/00063659909477233.","productDescription":"12 p.","startPage":"S62","endPage":"S73","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":479392,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/00063659909477233","text":"Publisher Index Page"},{"id":202004,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"46","issue":"S","noUsgsAuthors":false,"publicationDate":"2009-06-25","publicationStatus":"PW","scienceBaseUri":"4f4e4aa7e4b07f02db6672a9","contributors":{"authors":[{"text":"Conroy, M.J.","contributorId":84690,"corporation":false,"usgs":true,"family":"Conroy","given":"M.J.","email":"","affiliations":[],"preferred":false,"id":339736,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Senar, J.C.","contributorId":73317,"corporation":false,"usgs":true,"family":"Senar","given":"J.C.","email":"","affiliations":[],"preferred":false,"id":339735,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hines, J.E. 0000-0001-5478-7230","orcid":"https://orcid.org/0000-0001-5478-7230","contributorId":36885,"corporation":false,"usgs":true,"family":"Hines","given":"J.E.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":339734,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Domenech, J.","contributorId":101364,"corporation":false,"usgs":true,"family":"Domenech","given":"J.","email":"","affiliations":[],"preferred":false,"id":339737,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":5223873,"text":"5223873 - 1999 - Identification and distribution of cotton rats, genus Sigmodon (Muridae: Sigmodontinae), of Nayarit, M?xico","interactions":[],"lastModifiedDate":"2012-02-02T00:15:43","indexId":"5223873","displayToPublicDate":"2010-06-16T12:18:53","publicationYear":"1999","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3147,"text":"Proceedings of the Biological Society of Washington","active":true,"publicationSubtype":{"id":10}},"title":"Identification and distribution of cotton rats, genus Sigmodon (Muridae: Sigmodontinae), of Nayarit, M?xico","docAbstract":"Morphological, chromosomal, distributional, and ecological data are presented for three species of Sigmodon (S. alleni, S. arizonae, and S. mascotensis) from the state of Nayarit, Mexico.  The species were collected in all possible pairwise combinations of sympatry, including the first record of such documented for S. arizonae and S. mascotensis.  Emphasis is devoted to the discrimination of S. arizonae and S. mascotensis, from each other and from typical S. hispidus, using qualitative features of the skin and skull and morphometric analyses of craniodental measurements.  Based on these results and examination of type specimens, additional synonyms of S. mascotensis are identified, with reassignment of two forms, tonalensis Bailey (1902) and obvelatus Russell (1952), currently mistaken as subspecies of S. hispidus.  Sigmodon mascotensis emerges as a species distributed from southern Nayarit and Zacatecas to extreme western Chiapas, where it inhabits deciduous or semi-deciduous tropical vegetation having a pronounced dry season.  These reallocations and other reidentifications remove any documentation for S. hispidus along the entire Pacific versant of Mexico.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Proceedings of the Biological Society of Washington","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","usgsCitation":"Carleton, M., Fisher, R., and Gardner, A.L., 1999, Identification and distribution of cotton rats, genus Sigmodon (Muridae: Sigmodontinae), of Nayarit, M?xico: Proceedings of the Biological Society of Washington, v. 112, no. 4, p. 813-856.","productDescription":"813-856","startPage":"813","endPage":"856","numberOfPages":"44","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":199523,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"112","issue":"4","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a09e4b07f02db5faaf1","contributors":{"authors":[{"text":"Carleton, M.D.","contributorId":106597,"corporation":false,"usgs":true,"family":"Carleton","given":"M.D.","email":"","affiliations":[],"preferred":false,"id":339784,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fisher, R.D.","contributorId":62967,"corporation":false,"usgs":true,"family":"Fisher","given":"R.D.","email":"","affiliations":[],"preferred":false,"id":339782,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Gardner, A. L.","contributorId":97213,"corporation":false,"usgs":true,"family":"Gardner","given":"A.","middleInitial":"L.","affiliations":[],"preferred":false,"id":339783,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
]}