{"pageNumber":"131","pageRowStart":"3250","pageSize":"25","recordCount":165309,"records":[{"id":70258713,"text":"sir20245042 - 2024 - Groundwater quality near the Placerita Oil Field, California, 2018","interactions":[],"lastModifiedDate":"2025-12-23T22:04:59.870246","indexId":"sir20245042","displayToPublicDate":"2024-09-26T08:40:00","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-5042","displayTitle":"Groundwater Quality Near the Placerita Oil Field, California, 2018","title":"Groundwater quality near the Placerita Oil Field, California, 2018","docAbstract":"<p>Groundwater-quality data and potential fluid-migration pathways near the Placerita Oil Field in Los Angeles County, California, were examined by the U.S. Geological Survey to determine if oil-field fluids (water and gas from oil-producing and non-producing zones) have mixed with groundwater resources. Six of the 13 new groundwater samples collected for this study contained petroleum hydrocarbons, thermogenic gas, inorganic chemical signatures, and (or) isotopic values consistent with potential mixing with fluids from hydrocarbon-bearing formations.</p><p>For historical groundwater samples, benzene was the most detected petroleum hydrocarbon. The historical groundwater samples with a benzene concentration greater than 0.5 micrograms per liter were from environmental monitoring wells at industrial or commercial facilities unrelated to oil and gas development that, in many cases, have identified soil or groundwater contamination and were not typically analyzed for other constituents that could provide additional lines of evidence for potential mixing with oil-field fluids. Methane was not detected in any of the 12 historical samples with a reported measurement.</p><p>Reviewing historical data revealed factors that could potentially adversely affect groundwater quality in the study area. These factors include modified hydraulic gradients caused by large volumes of water extracted from the main production area and reinjected downgradient into nonproducing zones, well-barrier failures in wells constructed in the northern part of the oil field before the 1970s, well-barrier failures in produced-water disposal wells downgradient from the main production area, and naturally occurring hydrocarbons at shallow intervals. The groundwater samples most geochemically similar to samples from hydrocarbon-bearing formations were in areas where hydrocarbons are naturally occurring at shallow intervals and where oil development is at shallow depths. Additional data for hydraulic heads, water quality, and formation temperatures at multiple depths in areas with large injection volumes and well-integrity issues are needed to evaluate whether those factors have contributed to mixing between fluids from oil-producing or injection formations and groundwater resources.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20245042","collaboration":"Prepared in cooperation with the California State Water Resources Control Board","usgsCitation":"Stanton, J.S., Landon, M.K., Shimabukuro, D.H., Kulongoski, J.T., Hunt, A.G., McMahon, P.B., Cozzarelli, I.M., Anders, R., and Sowers, T.A., 2024, Groundwater quality near the Placerita Oil Field, California, 2018: U.S. Geological Survey Scientific Investigations Report 2024–5042, 65 p., https://doi.org/10.3133/sir20245042.","productDescription":"Report: ix, 65 p.; 2 Data Releases; 7 Tables","numberOfPages":"65","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-152098","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":462192,"rank":9,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2024/5042/sir20245042_app2_csv.zip","text":"Appendix 2, Tables 2.1–2.7","size":"10.4 KB","linkFileType":{"id":6,"text":"zip"},"linkHelpText":"- CSV files"},{"id":462187,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2024/5042/images/"},{"id":462188,"rank":5,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2024/5042/sir20245042.XML","linkFileType":{"id":8,"text":"xml"},"description":"SIR 2024-5042 XML"},{"id":462186,"rank":3,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/sir20245042/full","text":"Report","linkFileType":{"id":5,"text":"html"},"description":"SIR 2024-5042 HTML"},{"id":462191,"rank":8,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2024/5042/sir20245042_app2.xlsx","text":"Appendix 2, Tables 2.1–2.7","size":"56.3 KB","linkFileType":{"id":3,"text":"xlsx"},"linkHelpText":"- Supplemental Tables for the Placerita Oil Field Study Area, California, 2018"},{"id":462190,"rank":7,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9G5UD7J","text":"USGS data release","linkHelpText":"Water chemistry data for samples collected at groundwater sites in the Placerita Oil Field study area, June 2018—November 2018, Los Angeles County, California"},{"id":462189,"rank":6,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P93KFFR8","text":"USGS data release","linkHelpText":"Produced water chemistry data collected from the Oxnard Oil Field, Ventura County, and the Placerita Oil Field, Los Angeles County, 2018, California"},{"id":462185,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2024/5042/sir20245042.pdf","text":"Report","size":"7.93 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2024-5042 PDF"},{"id":462184,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2024/5042/coverthb.jpg"},{"id":497953,"rank":10,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_117501.htm","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"California","otherGeospatial":"Placerita Oil Field","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -118.5667,\n              34.4333\n            ],\n            [\n              -118.5667,\n              34.3333\n            ],\n            [\n              -118.4,\n              34.3333\n            ],\n            [\n              -118.4,\n              34.4333\n            ],\n            [\n              -118.5667,\n              34.4333\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/california-water-science-center\" data-mce-href=\"https://www.usgs.gov/centers/california-water-science-center\">California Water Science Center</a><br>U.S. Geological Survey<br>6000 J Street, Placer Hall<br>Sacramento, California 95819</p><p><a href=\"https://pubs.usgs.gov/contact\" data-mce-href=\"../contact\">Contact Pubs Warehouse</a></p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Groundwater Quality</li><li>Potential Fluid-Migration Pathways</li><li>Relation of Groundwater Quality to Pathways</li><li>Study Limitations</li><li>Summary</li><li>References Cited</li><li>Appendix 1. Glossary</li><li>Appendix 2. Supplemental Tables for the Placerita Oil Field Study Area, California, 2018</li><li>Appendix 3. Quality of Groundwater Samples Collected for the Placerita Oil Field Study Area, California, 2018</li><li>Appendix 4. Noble Gas Compositions of Groundwater and Produced Water in the Placerita Oil Field Study Area, California, 2018</li></ul>","publishingServiceCenter":{"id":11,"text":"Pembroke PSC"},"publishedDate":"2024-09-26","noUsgsAuthors":false,"plainLanguageSummary":"<p>The U.S. Geological Survey studied groundwater near the Placerita Oil Field in Los Angeles County to see if oil-field fluids have mixed with groundwater. Six out of 13 new samples showed signs of mixing with fluids from hydrocarbon-bearing formations. Historical data revealed factors that could affect groundwater quality, including modified hydraulic gradients, well-barrier failures, and naturally occurring hydrocarbons. More data are needed to evaluate the effects of these factors.</p>","publicationDate":"2024-09-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Stanton, Jennifer S. 0000-0002-2520-753X jstanton@usgs.gov","orcid":"https://orcid.org/0000-0002-2520-753X","contributorId":830,"corporation":false,"usgs":true,"family":"Stanton","given":"Jennifer","email":"jstanton@usgs.gov","middleInitial":"S.","affiliations":[{"id":376,"text":"Massachusetts Water Science Center","active":true,"usgs":true},{"id":466,"text":"New England Water Science Center","active":true,"usgs":true},{"id":464,"text":"Nebraska Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913787,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Landon, Matthew K. 0000-0002-5766-0494 landon@usgs.gov","orcid":"https://orcid.org/0000-0002-5766-0494","contributorId":392,"corporation":false,"usgs":true,"family":"Landon","given":"Matthew","email":"landon@usgs.gov","middleInitial":"K.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913788,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Shimabukuro, David H. 0000-0002-6106-5284","orcid":"https://orcid.org/0000-0002-6106-5284","contributorId":208209,"corporation":false,"usgs":false,"family":"Shimabukuro","given":"David","email":"","middleInitial":"H.","affiliations":[{"id":37762,"text":"California State University, Sacramento","active":true,"usgs":false}],"preferred":false,"id":913789,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kulongoski, Justin T. 0000-0002-3498-4154 kulongos@usgs.gov","orcid":"https://orcid.org/0000-0002-3498-4154","contributorId":173457,"corporation":false,"usgs":true,"family":"Kulongoski","given":"Justin","email":"kulongos@usgs.gov","middleInitial":"T.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913790,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hunt, Andrew G. 0000-0002-3810-8610","orcid":"https://orcid.org/0000-0002-3810-8610","contributorId":206197,"corporation":false,"usgs":true,"family":"Hunt","given":"Andrew G.","affiliations":[{"id":309,"text":"Geology and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":913791,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"McMahon, Peter B. 0000-0001-7452-2379 pmcmahon@usgs.gov","orcid":"https://orcid.org/0000-0001-7452-2379","contributorId":724,"corporation":false,"usgs":true,"family":"McMahon","given":"Peter","email":"pmcmahon@usgs.gov","middleInitial":"B.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913792,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Cozzarelli, Isabelle M. 0000-0002-5123-1007 icozzare@usgs.gov","orcid":"https://orcid.org/0000-0002-5123-1007","contributorId":1693,"corporation":false,"usgs":true,"family":"Cozzarelli","given":"Isabelle","email":"icozzare@usgs.gov","middleInitial":"M.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true},{"id":49175,"text":"Geology, Energy & Minerals Science Center","active":true,"usgs":true}],"preferred":true,"id":913793,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Anders, Robert 0000-0002-2363-9072 randers@usgs.gov","orcid":"https://orcid.org/0000-0002-2363-9072","contributorId":1210,"corporation":false,"usgs":true,"family":"Anders","given":"Robert","email":"randers@usgs.gov","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913794,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Sowers, Theron A. 0000-0002-3208-5411","orcid":"https://orcid.org/0000-0002-3208-5411","contributorId":211482,"corporation":false,"usgs":false,"family":"Sowers","given":"Theron","email":"","middleInitial":"A.","affiliations":[{"id":37762,"text":"California State University, Sacramento","active":true,"usgs":false}],"preferred":false,"id":913795,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70259106,"text":"70259106 - 2024 - A framework for estimating economic impacts of ecological restoration","interactions":[],"lastModifiedDate":"2024-11-22T16:07:40.961159","indexId":"70259106","displayToPublicDate":"2024-09-26T07:10:39","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1547,"text":"Environmental Management","active":true,"publicationSubtype":{"id":10}},"title":"A framework for estimating economic impacts of ecological restoration","docAbstract":"<div id=\"Abs1-section\" class=\"c-article-section\"><div id=\"Abs1-content\" class=\"c-article-section__content\"><p>Ecological restoration projects are designed to improve natural and cultural resources. Spending on restoration also stimulates economic impacts to the restoration economy through the creation or support of jobs and business activity. This paper presents accessible methods for quantifying the economic impacts supported by restoration spending and is written to be a guide and toolbox for an interdisciplinary audience of restoration practitioners and economists. Measuring the economic impacts of restoration can be challenging due to lacking or limited data. The complex, collaborative, and heterogeneous nature of restoration projects can make it difficult to clearly track costs, contributing to limited availability and inconsistency in restoration cost data. And business classification systems, such as the North American Industrial Classification System (NAICS), do not include restoration-sectors that consistently describe the patterns of restoration spending. The aims of this paper are to (1) provide restoration practitioners and program managers with a clear understanding of the application of economic impact analyses to restoration, (2) provide a framework for collecting project cost data for economic impact analyses, and (3) provide modeling best practices and an example application of the framework.</p></div></div>","language":"English","publisher":"Springer Nature","doi":"10.1007/s00267-024-02040-x","usgsCitation":"Cullinane Thomas, C., Huber, C., Skrabis, K.E., and Hoelzle, T.B., 2024, A framework for estimating economic impacts of ecological restoration: Environmental Management, v. 74, p. 1239-1259, https://doi.org/10.1007/s00267-024-02040-x.","productDescription":"21 p.","startPage":"1239","endPage":"1259","ipdsId":"IP-148143","costCenters":[{"id":554,"text":"Science and Decisions Center","active":true,"usgs":true}],"links":[{"id":466899,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s00267-024-02040-x","text":"Publisher Index Page"},{"id":462327,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"74","noUsgsAuthors":false,"publicationDate":"2024-09-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Cullinane Thomas, Catherine 0000-0001-8168-1271","orcid":"https://orcid.org/0000-0001-8168-1271","contributorId":344568,"corporation":false,"usgs":false,"family":"Cullinane Thomas","given":"Catherine","affiliations":[{"id":41697,"text":"USDA Economic Research Service","active":true,"usgs":false}],"preferred":false,"id":914162,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Huber, Christopher 0000-0001-8446-8134 chuber@usgs.gov","orcid":"https://orcid.org/0000-0001-8446-8134","contributorId":127600,"corporation":false,"usgs":true,"family":"Huber","given":"Christopher","email":"chuber@usgs.gov","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":914163,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Skrabis, Kristin E.","contributorId":344569,"corporation":false,"usgs":false,"family":"Skrabis","given":"Kristin","email":"","middleInitial":"E.","affiliations":[{"id":82391,"text":"DOI Office of Policy Analysis","active":true,"usgs":false}],"preferred":false,"id":914164,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hoelzle, Timothy B.","contributorId":169849,"corporation":false,"usgs":false,"family":"Hoelzle","given":"Timothy","email":"","middleInitial":"B.","affiliations":[{"id":25607,"text":"Great Ecology, 3459 Ringsby Court, Suite 421, Denver, CO","active":true,"usgs":false}],"preferred":false,"id":914165,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70259191,"text":"70259191 - 2024 - Factors contributing to pesticide contamination in riverine systems: The role of wastewater and landscape sources","interactions":[],"lastModifiedDate":"2024-10-01T11:49:20.686522","indexId":"70259191","displayToPublicDate":"2024-09-26T06:44:51","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Factors contributing to pesticide contamination in riverine systems: The role of wastewater and landscape sources","docAbstract":"<div id=\"ab0005\" class=\"abstract author\" lang=\"en\"><div id=\"as0005\"><div id=\"sp0045\" class=\"u-margin-s-bottom\">Wastewater treatment plant (WWTP) discharges can be a source of organic contaminants, including pesticides, to rivers. An integrated model was developed for the Potomac River watershed (PRW) to determine the amount of accumulated wastewater percentage of streamflow (ACCWW) and calculate predicted environmental concentrations (PECs) for 14 pesticides in non-tidal National Hydrography Dataset Plus Version 2.1 stream segments. Predicted environmental concentrations were compared to measured environmental concentrations (MECs) from 32 stream sites that represented a range of ACCWW and land use to evaluate model performance and to assess possible non-WWTP loading sources. Statistical agreement between PECs and MECs was strongest for insecticides, followed by fungicides and herbicides. Principal component analysis utilizing optical fluorescence and ancillary water quality data identified wastewater and urban runoff sources. Pesticides that indicated relatively larger sources from WWTPs included dinotefuran, fipronil, carbendazim, thiabendazole, and prometon whereas imidacloprid, azoxystrobin, propiconazole, tebuconazole, and diuron were more related to urban runoff. In addition, PECs generally comprised a low proportion of MECs, which indicates possible dominant loading sources beyond WWTP discharges. Cumulative potential toxicity was higher for sites with greater ACCWW and/or located in developed areas. Imidacloprid, fipronil, and carbendazim accounted for the largest portion of predicted potential toxicity across sites. The chronic aquatic life toxicity benchmarks for freshwater invertebrates were exceeded for 82&nbsp;% of the imidacloprid detections (<i>n</i>&nbsp;=&nbsp;28) and 47&nbsp;% of the fipronil detections (<i>n</i>&nbsp;=&nbsp;19). These results highlight the ecological implications of pesticide contamination from WWTP discharges and also the potential legacy effects from accumulated soil and groundwater sources. Pesticide management strategies that mitigate both current and historical impacts may improve the health of aquatic ecosystems.</div></div></div>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2024.174939","usgsCitation":"Miller, S.A., Faunce, K.E., Barber, L., Fleck, J., Burns, D.W., Jasmann, J.R., and Hladik, M.L., 2024, Factors contributing to pesticide contamination in riverine systems: The role of wastewater and landscape sources: Science of the Total Environment, v. 954, 174939, 20 p., https://doi.org/10.1016/j.scitotenv.2024.174939.","productDescription":"174939, 20 p.","ipdsId":"IP-163718","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":37759,"text":"VA/WV Water Science Center","active":true,"usgs":true}],"links":[{"id":466900,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.scitotenv.2024.174939","text":"Publisher Index Page"},{"id":490408,"rank":2,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P134KYMX","text":"USGS data release","linkHelpText":"Data for the Potomac River Watershed Accumulated Wastewater Viewer"},{"id":490407,"rank":1,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9DUC4L1","text":"USGS data release","linkHelpText":"Environmental Sampling and Modeling Results to Characterize Surface-Water Quality at 32 Sites Across the Potomac River Watershed, 2022 (ver. 3.0, April 2025)"},{"id":462432,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":"Potomac River watershed","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -76.00158016691461,\n              37.7988952018341\n            ],\n            [\n              -76.30315760557744,\n              39.41263041610057\n            ],\n            [\n              -76.67191432446523,\n              40.08428166281456\n            ],\n            [\n              -78.02170860891448,\n              40.115475475687674\n            ],\n            [\n              -79.51949995994003,\n              39.934136133761626\n            ],\n            [\n              -80.11964444845647,\n              39.194067143596186\n            ],\n            [\n              -79.98352863659944,\n              37.91127030328214\n            ],\n            [\n              -79.8471944255433,\n              37.08531532441057\n            ],\n            [\n              -77.98677780480173,\n              38.1705801476881\n            ],\n            [\n              -76.00158016691461,\n              37.7988952018341\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"954","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Miller, Samuel Adam 0000-0003-4225-1601","orcid":"https://orcid.org/0000-0003-4225-1601","contributorId":333495,"corporation":false,"usgs":true,"family":"Miller","given":"Samuel","email":"","middleInitial":"Adam","affiliations":[{"id":37759,"text":"VA/WV Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914437,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Faunce, Kaycee E. 0000-0002-9178-0692","orcid":"https://orcid.org/0000-0002-9178-0692","contributorId":224488,"corporation":false,"usgs":true,"family":"Faunce","given":"Kaycee","email":"","middleInitial":"E.","affiliations":[{"id":37759,"text":"VA/WV Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914438,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Barber, Larry B. 0000-0002-0561-0831","orcid":"https://orcid.org/0000-0002-0561-0831","contributorId":218953,"corporation":false,"usgs":true,"family":"Barber","given":"Larry B.","affiliations":[{"id":38175,"text":"Toxics Substances Hydrology Program","active":true,"usgs":true},{"id":37277,"text":"WMA - 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Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":914442,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hladik, Michelle L. 0000-0002-0891-2712","orcid":"https://orcid.org/0000-0002-0891-2712","contributorId":221229,"corporation":false,"usgs":true,"family":"Hladik","given":"Michelle","middleInitial":"L.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914443,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70260209,"text":"70260209 - 2024 - Cross-fade sampling: Extremely efficient Bayesian inversion for a variety of geophysical problems","interactions":[],"lastModifiedDate":"2024-10-30T11:42:28.476034","indexId":"70260209","displayToPublicDate":"2024-09-26T06:41:07","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1803,"text":"Geophysical Journal International","active":true,"publicationSubtype":{"id":10}},"title":"Cross-fade sampling: Extremely efficient Bayesian inversion for a variety of geophysical problems","docAbstract":"<p class=\"chapter-para\">This paper introduces cross-fade sampling, a computationally efficient Markov Chain Monte Carlo simulation method that uses a semi-analytical approach to quickly solve Bayesian inverse problems that do not themselves have an analytical solution. Cross-fading is efficient in two ways. First, it requires fewer samples to obtain the same quality simulation of the target probability density function (PDF). Secondly, it is much faster to evaluate the posterior probability of each sample than conventional sampling methods for simulating Bayesian posterior PDFs. Conventional methods require evaluating the prior probability (which describes your<span>&nbsp;</span><i>a priori</i><span>&nbsp;</span>constraints) and data likelihood (which describes the fit between the observations and the predictions of the model) for each sample model. However, cross-fading does not require evaluating the data likelihood, meaning that ‘big data’ can be fit with zero additional computational cost. Further, the cross-fading approach can be used to calculate the marginal likelihood associated with a model design, facilitating model comparison and Bayesian model averaging. Topics covered in this paper include derivation of the cross-fade approach and how it can be used to simulate Bayesian posterior PDFs and compute the marginal likelihood, discussion of the class of problems to which cross-fading can be applied (with examples from earthquake statistics, earthquake ground motion modelling, volcanic eruption forecasting, and finite fault slip modelling), demonstration of efficiency relative to existing sampling methods and discussion of how cross-fading can be used to account for prediction errors (i.e. epistemic errors) as part of the geophysical inverse problem.</p>","language":"English","publisher":"Oxford Academic","doi":"10.1093/gji/ggae353","usgsCitation":"Minson, S.E., 2024, Cross-fade sampling: Extremely efficient Bayesian inversion for a variety of geophysical problems: Geophysical Journal International, v. 239, no. 3, p. 1629-1649, https://doi.org/10.1093/gji/ggae353.","productDescription":"21 p.","startPage":"1629","endPage":"1649","ipdsId":"IP-158117","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":466901,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/gji/ggae353","text":"Publisher Index Page"},{"id":463412,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"239","issue":"3","noUsgsAuthors":false,"publicationDate":"2024-09-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Minson, Sarah E. 0000-0001-5869-3477 sminson@usgs.gov","orcid":"https://orcid.org/0000-0001-5869-3477","contributorId":5357,"corporation":false,"usgs":true,"family":"Minson","given":"Sarah","email":"sminson@usgs.gov","middleInitial":"E.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":917419,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70258746,"text":"sir20245071 - 2024 - Pesticides in surface water downstream of and near agricultural and developed land in Hawai‘i, 2015–19","interactions":[],"lastModifiedDate":"2025-12-29T14:29:03.412249","indexId":"sir20245071","displayToPublicDate":"2024-09-25T13:15:46","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-5071","displayTitle":"Pesticides in Surface Water Downstream of and Near Agricultural and Developed Land in Hawai‘i, 2015–19","title":"Pesticides in surface water downstream of and near agricultural and developed land in Hawai‘i, 2015–19","docAbstract":"<p>Pesticides and pesticide degradates (herein referred to as pesticides) in surface water were assessed at 78 sites on 4 Hawaiian Islands (Kauaʻi, Oʻahu, Maui, and Island of Hawaiʻi) during 2015–19. Each site was downstream of or near agricultural land, developed land, or both. Most (58) sites were streams; the remaining sites were canals, ditches, anchialine pools, coastal ponds, and the nearshore ocean. Pesticides in water at each site were assessed by collection of one to four water samples, by a weeks-long deployment of a passive sampler, or both. Passive-sampler extracts and water samples, which consisted of fair-weather samples and storm samples, were analyzed for as many as 253 pesticides that consisted of 129 herbicides, 101 insecticides, and 23 fungicides.</p><p>A total of 117 pesticides were detected in water. Of these, 30 pesticides were detected at more than 20 percent of their assessment sites and thus were considered “common” pesticides. The common pesticides included 17 herbicides (ametryn, atrazine, bentazon, bromacil, diuron, hexazinone, metolachlor, propazine, simazine, triclopyr, prometryn, and degradates of atrazine [4], diuron, hexazinone, and prometryn); 8 insecticides (carbaryl, dinotefuran, fipronil, flubendiamide, imidacloprid, methoxyfenozide and 2 degradates of fipronil); and 5 fungicides (azoxystrobin, metalaxyl, propiconazole, a degradate of chlorothalonil, and a degradate of thiophanate-methyl and benomyl). Common pesticides typically were present more frequently in storm samples than in fair-weather samples. A mixture of two or more pesticides was detected in 86 percent of the water samples and in water during every passive-sampler deployment.</p><p>About 92 percent of all pesticide detections had concentrations less than 100 nanograms per liter. Pesticide concentrations were less than Federal aquatic-life benchmarks (ALBs) for vertebrates and typically were less than ALBs for invertebrates, nonvascular plants, and vascular plants. Acute ALBs were exceeded by acetochlor, atrazine, carbaryl, chlorpyrifos, cis-permethrin, diazinon, diuron, halosulfuron methyl, and imidacloprid in storm samples at one to four sites. ALBs for invertebrates were exceeded by clothianidin, diazinon, fipronil, and imidacloprid in fair-weather samples, during passive-sampler deployments, or both at 1 to 17 sites. Federal drinking water standards were available for only five pesticides detected in water, and the standard for atrazine was exceeded in one storm sample. Pesticide concentrations did not exceed any Federal human-health benchmarks, but many of the detected pesticides did not have a benchmark.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20245071","collaboration":"Prepared in cooperation with the State of Hawai‘i Department of Agriculture","usgsCitation":"Johnson, A.G., Kennedy, J.J., and Alvarez, D.A., 2024, Pesticides in surface water downstream of and near agricultural and developed land in Hawai‘i, 2015–19: U.S. Geological Survey Scientific Investigations Report 2024–5071, 94 p., https://doi.org/10.3133/sir20245071.","productDescription":"Report: ix, 94 p.; 3 Data Releases","numberOfPages":"94","onlineOnly":"Y","ipdsId":"IP-154311","costCenters":[{"id":525,"text":"Pacific Islands Water Science Center","active":true,"usgs":true}],"links":[{"id":462624,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9K782ZO","text":"USGS Data Release","description":"Johnson, A.G., and Alvarez, D.A., 2024, Pesticide, organic-contaminant, and wastewater-indicator results for passive samplers deployed in surface water and groundwater in Hawai‘i, 2015–19: U.S. Geological Survey data release, https://doi.org/10.5066/P9K782ZO.","linkHelpText":"Pesticide, organic-contaminant, and wastewater-indicator results for passive samplers deployed in surface water and groundwater in Hawai‘i, 2015–19"},{"id":462625,"rank":5,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P95XY6ZY","text":"USGS Data Release","description":"Johnson, A.G., and Kennedy, J.J., 2024, Surface-water sites in Hawai‘i where pesticides were assessed, 2015–19: U.S. Geological Survey data release, https://doi.org/10.5066/P95XY6ZY.","linkHelpText":"Surface-water sites in Hawai‘i where pesticides were assessed, 2015–19"},{"id":462623,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9WX2RGU","text":"USGS Data 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 \"}}]}","contact":"<p><a href=\"mailto:dc_hi@usgs.gov\" data-mce-href=\"mailto:dc_hi@usgs.gov\">Director</a>,<br><a href=\"https://www.usgs.gov/piwsc\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/piwsc\">Pacific Islands Water Science Center</a><br><a href=\"https://www.usgs.gov/\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov\">U.S. Geological Survey</a><br>Inouye Regional Center<br>1845 Wasp Blvd., B176<br>Honolulu, HI 96818</p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Methods—Assessment of Pesticides in Surface Water in Hawai‘i, 2015–19</li><li>Methods—Management and Analysis of Pesticide Results</li><li>Results—Pesticide Occurrence in Surface Water</li><li>Limitations of Pesticide Assessment</li><li>Suggestions for Future Pesticide Monitoring</li><li>Summary</li><li>References Cited</li><li>Appendix 1. Amounts of restricted-use pesticides sold in Hawai‘i, 2014–19</li><li>Appendix 2. Methods Used to Collect Water Samples, Deploy Passive Samplers, and Prepare Passive-Sampler Extracts</li><li>Appendix 3. Quality-Control Samples Associated with Water Samples and Passive Samplers</li><li>Appendix 4. Pesticides Analyzed in Water Samples and Passive Samplers Collected and Deployed in Hawai‘i During 2015–19</li></ul>","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"publishedDate":"2024-10-04","noUsgsAuthors":false,"publicationDate":"2024-10-04","publicationStatus":"PW","contributors":{"authors":[{"text":"Johnson, Adam G. 0000-0003-2448-5746 ajohnson@usgs.gov","orcid":"https://orcid.org/0000-0003-2448-5746","contributorId":4752,"corporation":false,"usgs":true,"family":"Johnson","given":"Adam","email":"ajohnson@usgs.gov","middleInitial":"G.","affiliations":[{"id":525,"text":"Pacific Islands Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913934,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kennedy, Joseph J. 0000-0002-6608-2366","orcid":"https://orcid.org/0000-0002-6608-2366","contributorId":333051,"corporation":false,"usgs":false,"family":"Kennedy","given":"Joseph J.","affiliations":[{"id":518,"text":"Oregon Water Science Center","active":true,"usgs":true}],"preferred":false,"id":913935,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Alvarez, David A. 0000-0002-6918-2709 dalvarez@usgs.gov","orcid":"https://orcid.org/0000-0002-6918-2709","contributorId":1369,"corporation":false,"usgs":true,"family":"Alvarez","given":"David","email":"dalvarez@usgs.gov","middleInitial":"A.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":913936,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70258673,"text":"fs20243021 - 2024 - Projected sea-level rise and high tide flooding at San Juan National Historic Site, Puerto Rico","interactions":[],"lastModifiedDate":"2025-12-23T22:10:19.596139","indexId":"fs20243021","displayToPublicDate":"2024-09-25T10:33:00","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-3021","displayTitle":"Projected Sea-Level Rise and High Tide Flooding at San Juan National Historic Site, Puerto Rico","title":"Projected sea-level rise and high tide flooding at San Juan National Historic Site, Puerto Rico","docAbstract":"<h1>Introduction</h1><p><span>National parks and preserves in the South Atlantic-Gulf Region contain valuable coastal habitats such as tidal wetlands and mangrove forests, as well as irreplaceable historic buildings and archeological sites located in low-lying areas. These natural and cultural resources are vulnerable to accelerated sea-level rise and escalating high tide flooding events. Through a Natural Resources Preservation Program-funded project during 2021–23, the U.S. Geological Survey, in collaboration with the National Park Service, estimated the probability of inundation at San Juan National Historic Site, Puerto Rico, and several other parks under various sea-level rise scenarios and contemporary high tide flooding thresholds. The maps produced for this effort can be used to assess potential habitat change and explore how infrastructure and cultural resources within the park may be exposed to future flooding-related hazards.</span></p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20243021","issn":"2327-6932","collaboration":"Prepared in collaboration with the National Park Service","usgsCitation":"Thurman, H.R., Enwright, N.M., Osland, M.J., Passeri, D.L., Day, R.H., and Simons, B.M., 2024, Projected sea-level rise and high tide flooding at San Juan National Historic Site, Puerto Rico: U.S. Geological Survey Fact Sheet 2024–3021, 6 p., https://doi.org/10.3133/fs20243021.","productDescription":"Report: 6 p.; Data Release","numberOfPages":"6","onlineOnly":"Y","ipdsId":"IP-156844","costCenters":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":497956,"rank":9,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_117503.htm","linkFileType":{"id":5,"text":"html"}},{"id":462351,"rank":4,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/publication/fs20243008","text":"USGS Fact Sheet 2024-3008","description":"FS 2024-3008","linkHelpText":"- Projected Sea-Level Rise and High Tide Flooding at Timucuan Ecological and Historic Preserve, Florida"},{"id":462349,"rank":7,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/publication/fs20243023","text":"USGS Fact Sheet 2024-3023","description":"FS 2024-3023","linkHelpText":"- Projected Sea-Level Rise and High Tide Flooding at Dry Tortugas National Park, Florida"},{"id":462141,"rank":3,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2024/3021/fs20243021.pdf","size":"3.76 MB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2024-3021"},{"id":462142,"rank":2,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9GKQT13","text":"USGS Data Release","linkHelpText":"Sea-level rise and high tide flooding inundation probability and depth statistics at San Juan National Historic Site, Puerto Rico"},{"id":462140,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2024/3021/coverthb.jpg"},{"id":462350,"rank":8,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/publication/fs20243024","text":"USGS Fact Sheet 2024-3024","description":"FS2024-3024","linkHelpText":"- Projected Sea-Level Rise and High Tide Flooding at Biscayne National Park, Florida"},{"id":462352,"rank":6,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/publication/fs20243022","text":"USGS Fact Sheet 2024-3022","description":"FS 2024-3022","linkHelpText":"- Projected Sea-Level Rise and High Tide Flooding at Big Cypress National Preserve, Florida"},{"id":462353,"rank":5,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/publication/fs20243016","text":"USGS Fact Sheet 2024-3016","description":"FS 2024-3016","linkHelpText":"- Projected Sea-Level Rise and High Tide Flooding at De Soto National Memorial, Florida"}],"country":"United States","otherGeospatial":"San Juan National Historic Site","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -66.14822077462958,\n              18.477902946276473\n            ],\n            [\n              -66.14822077462958,\n              18.454711725978513\n            ],\n            [\n              -66.10248459843638,\n              18.454711725978513\n            ],\n            [\n              -66.10248459843638,\n              18.477902946276473\n            ],\n            [\n              -66.14822077462958,\n              18.477902946276473\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a data-mce-href=\"https://www.usgs.gov/centers/wetland-and-aquatic-research-center-warc\" href=\"https://www.usgs.gov/centers/wetland-and-aquatic-research-center-warc\">Wetland and Aquatic Research Center</a><br>U.S. Geological Survey<br>700 Cajundome Blvd.<br>Lafayette, LA 70506–3152<br></p><p><a id=\"LPlnk\" class=\"OWAAutoLink\" title=\"https://pubs.usgs.gov/contact\" href=\"../contact\" data-auth=\"NotApplicable\" data-mce-href=\"../contact\">Contact Us- USGS Publications Warehouse</a></p>","tableOfContents":"<ul><li>Overview</li><li>Key Findings</li><li>Methods</li><li>Acknowledgments</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"publishedDate":"2024-09-25","noUsgsAuthors":false,"publicationDate":"2024-09-25","publicationStatus":"PW","contributors":{"authors":[{"text":"Thurman, Hana R. 0000-0001-7097-5362","orcid":"https://orcid.org/0000-0001-7097-5362","contributorId":337105,"corporation":false,"usgs":false,"family":"Thurman","given":"Hana","email":"","middleInitial":"R.","affiliations":[{"id":63558,"text":"Cherokee Nation System Solutions, contracted to the U.S. Geological Survey, Wetland and Aquatic Research Center","active":true,"usgs":false}],"preferred":true,"id":913624,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Enwright, Nicholas  M. 0000-0002-7887-3261","orcid":"https://orcid.org/0000-0002-7887-3261","contributorId":202150,"corporation":false,"usgs":true,"family":"Enwright","given":"Nicholas  M.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":913625,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Osland, Michael J. 0000-0001-9902-8692 mosland@usgs.gov","orcid":"https://orcid.org/0000-0001-9902-8692","contributorId":3080,"corporation":false,"usgs":true,"family":"Osland","given":"Michael","email":"mosland@usgs.gov","middleInitial":"J.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true}],"preferred":true,"id":913626,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Passeri, Davina L. 0000-0002-9760-3195","orcid":"https://orcid.org/0000-0002-9760-3195","contributorId":337108,"corporation":false,"usgs":true,"family":"Passeri","given":"Davina","email":"","middleInitial":"L.","affiliations":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":913627,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Day, Richard H. 0000-0002-5959-7054 dayr@usgs.gov","orcid":"https://orcid.org/0000-0002-5959-7054","contributorId":2427,"corporation":false,"usgs":true,"family":"Day","given":"Richard","email":"dayr@usgs.gov","middleInitial":"H.","affiliations":[{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":913628,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Simons, Bethanie M. 0009-0002-1214-3239","orcid":"https://orcid.org/0009-0002-1214-3239","contributorId":337106,"corporation":false,"usgs":false,"family":"Simons","given":"Bethanie","email":"","middleInitial":"M.","affiliations":[],"preferred":true,"id":913629,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70259465,"text":"70259465 - 2024 - Spatial variation of eDNA detection across an invasion gradient for invasive species monitoring programs","interactions":[],"lastModifiedDate":"2025-03-25T15:45:28.873478","indexId":"70259465","displayToPublicDate":"2024-09-25T09:40:32","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2287,"text":"Journal of Fish and Wildlife Management","active":true,"publicationSubtype":{"id":10}},"title":"Spatial variation of eDNA detection across an invasion gradient for invasive species monitoring programs","docAbstract":"<p><span>Spatial and temporal distribution data provide critical information for invasive species management. For example, distribution data can help managers with early detections and guiding other response actions. Environmental DNA (eDNA)-based sampling exists as one tool for monitoring invasive species. As part of bigheaded carp&nbsp;</span><i>Hypophthalmichthys</i><span>&nbsp;spp. monitoring efforts in the Illinois River, USA, we compared eDNA-based sampling results at multiple habitats across an invasion gradient in 2015. Greater densities of carp occurred downriver in the Illinois River and lower densities occurred upriver. We sampled from five locations along this gradient and from three habitat types (backwater, main channel, and shoreline) within each location. We sampled each location in April and June.&nbsp;</span><i>A priori</i><span>, we hypothesized that more eDNA detections would occur downriver, where higher densities of carp occur; that more eDNA detections would occur in backwater habitats compared to areas of the river with more fish movement; and that more eDNA detections would occur in April, because bigheaded carps are thought to use our sampling areas more during the spring. We compared the proportion of samples positive across this gradient, the habitat type, and the two sampling time periods. The most downriver location had the highest proportion of samples with eDNA detections, the backwater habitats had the highest proportion of samples with eDNA detections, and April had more positive detections than June. Our results highlight the importance of sampling across multiple habitat types and across time to gain a clear understanding of distribution when using eDNA-based sampling. Thus, being cognizant of the interactions between seasonal habitat use and eDNA-based detections is important for managers who rely upon eDNA-based monitoring.</span></p>","language":"English","publisher":"U.S. Fish and Wildlife Service","doi":"10.3996/JFWM-23-038","usgsCitation":"Peterman, L.L., Tuttle-Lau, M.T., DeHaan, P.W., Coulter, D.P., Spear, S.F., and Erickson, R.A., 2024, Spatial variation of eDNA detection across an invasion gradient for invasive species monitoring programs: Journal of Fish and Wildlife Management, v. 15, no. 2, p. 350-360, https://doi.org/10.3996/JFWM-23-038.","productDescription":"11 p.","startPage":"350","endPage":"360","ipdsId":"IP-138781","costCenters":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"links":[{"id":466902,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3996/jfwm-23-038","text":"Publisher Index Page"},{"id":462743,"rank":2,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Illinois","otherGeospatial":"Illinois River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -87.97996788684303,\n              41.96009875147479\n            ],\n            [\n              -89.36825568969475,\n              41.96009875147479\n            ],\n            [\n              -89.36825568969475,\n              40.943421835218516\n            ],\n            [\n              -87.97996788684303,\n              40.943421835218516\n            ],\n            [\n              -87.97996788684303,\n              41.96009875147479\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"15","issue":"2","noUsgsAuthors":false,"publicationDate":"2025-03-13","publicationStatus":"PW","contributors":{"authors":[{"text":"Peterman, Laura Lynne 0000-0001-6976-4138","orcid":"https://orcid.org/0000-0001-6976-4138","contributorId":328472,"corporation":false,"usgs":true,"family":"Peterman","given":"Laura","email":"","middleInitial":"Lynne","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":915401,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Tuttle-Lau, Maren T.","contributorId":146196,"corporation":false,"usgs":false,"family":"Tuttle-Lau","given":"Maren","email":"","middleInitial":"T.","affiliations":[{"id":6661,"text":"US Fish and Wildlife Service","active":true,"usgs":false}],"preferred":false,"id":915402,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"DeHaan, Patrick W.","contributorId":145918,"corporation":false,"usgs":false,"family":"DeHaan","given":"Patrick","email":"","middleInitial":"W.","affiliations":[{"id":16297,"text":"USFWS Abernathy Fish Technology Center, Longview, WA 98632","active":true,"usgs":false}],"preferred":false,"id":915403,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Coulter, David P.","contributorId":205629,"corporation":false,"usgs":false,"family":"Coulter","given":"David","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":915404,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Spear, Stephen Frank 0000-0001-8351-9382","orcid":"https://orcid.org/0000-0001-8351-9382","contributorId":293162,"corporation":false,"usgs":true,"family":"Spear","given":"Stephen","email":"","middleInitial":"Frank","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":915405,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Erickson, Richard A. 0000-0003-4649-482X rerickson@usgs.gov","orcid":"https://orcid.org/0000-0003-4649-482X","contributorId":5455,"corporation":false,"usgs":true,"family":"Erickson","given":"Richard","email":"rerickson@usgs.gov","middleInitial":"A.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":915406,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70259609,"text":"70259609 - 2024 - Groundwater-Surface water interactions research: Past trends and future directions","interactions":[],"lastModifiedDate":"2024-10-17T11:58:22.178363","indexId":"70259609","displayToPublicDate":"2024-09-25T06:55:28","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2342,"text":"Journal of Hydrology","active":true,"publicationSubtype":{"id":10}},"title":"Groundwater-Surface water interactions research: Past trends and future directions","docAbstract":"<div id=\"abstracts\" class=\"Abstracts u-font-serif\"><div id=\"ab010\" class=\"abstract author\"><div id=\"as010\"><div id=\"sp0010\" class=\"u-margin-s-bottom\">Interactions between groundwater and surface water sustain groundwater-dependent ecosystems and regulate river temperature and biogeochemical cycles, amongst many other processes. These interactions occur in freshwater environments including rivers, springs, lakes, and wetlands, and in coastal environments via tidal pumping, submarine groundwater discharge, and seawater intrusion. Here, we explore groundwater-surface water interactions research using bibliometric analyses of titles, abstracts, and keywords from 20,275 journal papers published between 1970 and 2023 extracted from Scopus. Analyses show that research into groundwater-surface water interactions is highly multi-disciplinary, with growing contributions from the social and biological sciences. The number of groundwater-surface water interactions papers is rapidly increasing with over 1200 papers published per year since 2020. Drawing on our data-driven approach and expert knowledge, we synthesise current research trends and identify critical future research directions. Despite the thousands of papers on groundwater-surface water interactions, important processes are still difficult to quantify or predict at meaningful spatial scales to inform water-resources management. We see benefits in future groundwater-surface water interactions research focusing on: (1) using new technologies including internet-of-things-based sensors, uncrewed vehicles, and remote-sensing approaches for data collection to inform groundwater-surface water interactions at large scales, (2) seeking approaches to upscale site-specific findings to better inform management, and (3) continuing the movement towards multi-disciplinary investigations to better inform the understanding of groundwater-surface water interactions and processes that will enable better management outcomes.</div></div></div></div><div id=\"reading-assistant-main-body-section\"><br></div><ul id=\"issue-navigation\" class=\"issue-navigation u-margin-s-bottom u-bg-grey1\"></ul>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jhydrol.2024.132061","usgsCitation":"Irvine, D.J., Singha, K., Kurylyk, B.L., Briggs, M., Sebastian, Y., Tait, D., and Helton, A., 2024, Groundwater-Surface water interactions research: Past trends and future directions: Journal of Hydrology, v. 644, 132061, 23 p., https://doi.org/10.1016/j.jhydrol.2024.132061.","productDescription":"132061, 23 p.","ipdsId":"IP-168109","costCenters":[{"id":37786,"text":"WMA - Observing Systems Division","active":true,"usgs":true}],"links":[{"id":466903,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.jhydrol.2024.132061","text":"Publisher Index Page"},{"id":462934,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"644","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Irvine, Dylan J.","contributorId":190404,"corporation":false,"usgs":false,"family":"Irvine","given":"Dylan","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":915937,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Singha, Kamini","contributorId":331170,"corporation":false,"usgs":false,"family":"Singha","given":"Kamini","affiliations":[{"id":6606,"text":"Colorado School of Mines","active":true,"usgs":false}],"preferred":false,"id":915938,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kurylyk, Barret L.","contributorId":176296,"corporation":false,"usgs":false,"family":"Kurylyk","given":"Barret","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":915939,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Briggs, Martin A. 0000-0003-3206-4132","orcid":"https://orcid.org/0000-0003-3206-4132","contributorId":222759,"corporation":false,"usgs":true,"family":"Briggs","given":"Martin A.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":915940,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Sebastian, Yakub","contributorId":345187,"corporation":false,"usgs":false,"family":"Sebastian","given":"Yakub","email":"","affiliations":[{"id":12877,"text":"Charles Darwin University","active":true,"usgs":false}],"preferred":false,"id":915941,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Tait, Douglas","contributorId":345188,"corporation":false,"usgs":false,"family":"Tait","given":"Douglas","email":"","affiliations":[{"id":40535,"text":"Southern Cross University","active":true,"usgs":false}],"preferred":false,"id":915942,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Helton, Ashley","contributorId":219741,"corporation":false,"usgs":false,"family":"Helton","given":"Ashley","affiliations":[{"id":36710,"text":"University of Connecticut","active":true,"usgs":false}],"preferred":false,"id":915943,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70258712,"text":"ofr20241043 - 2024 - Dissolved oxygen monitoring on the Souris River, 2019–23","interactions":[],"lastModifiedDate":"2025-12-23T22:08:50.448299","indexId":"ofr20241043","displayToPublicDate":"2024-09-25T06:54:02","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-1043","displayTitle":"Dissolved Oxygen Monitoring on the Souris River, 2019–23","title":"Dissolved oxygen monitoring on the Souris River, 2019–23","docAbstract":"<p>The U.S. Geological Survey (USGS) in partnership with the International Joint Commission installed and operated continuous water-quality monitors at three sites on the Souris River from May 2019 to October 2023. Continuously recorded data included dissolved oxygen (DO), water temperature, and specific conductance at the Souris River near Sherwood, North Dakota (USGS station 05114000), Souris River above Minot, N. Dak. (USGS station 05117500), and Souris River near Westhope, N. Dak (USGS station 05124000). The three sites on the Souris River were chosen for additional DO monitoring because they provided the best opportunity to capture potential effects on DO in areas downstream from major flow control structures and because identifying the connection of streamflow to DO at the international border is a focus of the International Souris River Board (ISRB).</p><p>The continuous water-quality monitoring at three sites on the Souris River from May 16, 2019, to October 1, 2023, indicated different patterns in DO among the three sites, and the different patterns indicate different factors affect DO concentrations among the sites. DO concentrations near Sherwood indicated the strong effect of algal dynamics at lower streamflow conditions with large diurnal fluctuations in DO concentration and indicated that streamflow does seem to affect DO concentrations when the streamflow is greater than about 100 cubic feet per second. DO concentrations were also frequently less than the water-quality objective (WQO) of 5 milligrams per liter in the summer and winter months, particularly during relatively low streamflow conditions in 2020 and 2021. DO concentrations above Minot had a different pattern with considerably fewer diurnal fluctuations than near Sherwood, high DO concentrations most winters except for the winter of 2021–22, and fewer instances when the DO was less than the WQO compared to Sherwood. The pattern of DO concentrations near Westhope seemed to be mainly influenced by the water chemistry coming out of J. Clark Salyer Pool 357 rather than streamflow and channel conditions at the site. The Westhope site also had the most days with daily minimum DO concentrations less than the WQO among the three sites, mainly in the winter when concentrations were consistently at or near 0 milligrams per liter for most of the winter months.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20241043","collaboration":"Prepared in cooperation with the International Joint Commission","usgsCitation":"Galloway, J.M., 2024, Dissolved oxygen monitoring on the Souris River, 2019–23: U.S. Geological Survey Open-File Report 2024–1043, 13 p., https://doi.org/10.3133/ofr20241043.","productDescription":"Report: iv, 13 p.; Dataset","numberOfPages":"20","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-167787","costCenters":[{"id":34685,"text":"Dakota Water Science Center","active":true,"usgs":true}],"links":[{"id":497955,"rank":7,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_117500.htm","linkFileType":{"id":5,"text":"html"}},{"id":462183,"rank":6,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/ofr20241043/full"},{"id":462182,"rank":5,"type":{"id":28,"text":"Dataset"},"url":"https://doi.org/10.5066/F7P55KJN","text":"USGS National Water Information System database","linkHelpText":"- USGS water data for the Nation"},{"id":462181,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/of/2024/1043/images/"},{"id":462180,"rank":3,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/of/2024/1043/ofr20241043.XML"},{"id":462179,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2024/1043/ofr20241043.pdf","text":"Report","size":"3.5 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2024–1043"},{"id":462178,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2024/1043/coverthb.jpg"}],"country":"Canada, United States","state":"North Dakota","otherGeospatial":"Souris River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -105.03302625208204,\n              50.79350866915286\n            ],\n            [\n              -105.03302625208204,\n              47.533599370512235\n            ],\n            [\n              -98.11163953333218,\n              47.533599370512235\n            ],\n            [\n              -98.11163953333218,\n              50.79350866915286\n            ],\n            [\n              -105.03302625208204,\n              50.79350866915286\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/dakota-water\" data-mce-href=\"https://www.usgs.gov/centers/dakota-water\">Dakota Water Science Center</a><br>U.S. Geological Survey<br>821 East Interstate Avenue<br>Bismarck, ND 58503<br>1608 Mountain View Road<br>Rapid City, SD 57702</p><p><a href=\"https://pubs.usgs.gov/contact\" data-mce-href=\"../contact\">Contact Pubs Warehouse</a></p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Purpose and Scope</li><li>Methods</li><li>Continuous Water Quality in the Souris River 2019–23</li><li>Implications</li><li>Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"publishedDate":"2024-09-25","noUsgsAuthors":false,"publicationDate":"2024-09-25","publicationStatus":"PW","contributors":{"authors":[{"text":"Galloway, Joel M. 0000-0002-9836-9724 jgallowa@usgs.gov","orcid":"https://orcid.org/0000-0002-9836-9724","contributorId":1562,"corporation":false,"usgs":true,"family":"Galloway","given":"Joel","email":"jgallowa@usgs.gov","middleInitial":"M.","affiliations":[{"id":34685,"text":"Dakota Water Science Center","active":true,"usgs":true},{"id":478,"text":"North Dakota Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913786,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70259152,"text":"70259152 - 2024 - Lead exposure of a fossorial rodent varies with the use of ammunition across the landscape","interactions":[],"lastModifiedDate":"2024-10-03T15:50:03.842048","indexId":"70259152","displayToPublicDate":"2024-09-25T06:36:50","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":18720,"text":"Science ot the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Lead exposure of a fossorial rodent varies with the use of ammunition across the landscape","docAbstract":"<div id=\"ab0005\" class=\"abstract author\" lang=\"en\"><div id=\"as0005\"><div id=\"sp0025\" class=\"u-margin-s-bottom\">Exposure to heavy metals has been documented in a wide range of wildlife species, but infrequently in ground squirrels. This is despite their tendency to be targets of recreational shooters and the accumulation of lead ammunition in the soil environments they inhabit. We analyzed lead and copper concentrations in liver (n<sub>Pb</sub>&nbsp;=&nbsp;116, n<sub>Cu</sub>&nbsp;=&nbsp;101) and femur (n<sub>Pb</sub>&nbsp;=&nbsp;116, n<sub>Cu</sub>&nbsp;=&nbsp;116) of Piute ground squirrels (<i>Urocitellus mollis</i>) and in soil (<i>n</i> = 75) on public lands in southwestern Idaho to understand how lead exposure may vary across a gradient of intensities and histories of shooting activity. The liver and femur of squirrels from areas used for recreational shooting for greater than 30 years had elevated lead concentrations relative to areas where shooting was rare or did not occur (our negative control), but as expected, lower than areas used for military target training for greater than 70 years (our positive control). Lead concentration in soils were higher in areas used for military target training than in those used for recreational shooting. There were no differences in copper concentrations in biological or soil samples among sites. These data suggest that ground squirrels can be influenced by the history of lead use in their local environment, and they illustrate another pathway by which human activity can influence toxicant exposure to wildlife.</div></div></div><div id=\"ab0010\" class=\"abstract graphical\" lang=\"en\"><br></div>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2024.176406","usgsCitation":"Slabe, V., Warner, K., Duran, Z.K., Pilliod, D., Ortiz, P., Schmidt, D., Szabo, S., and Katzner, T., 2024, Lead exposure of a fossorial rodent varies with the use of ammunition across the landscape: Science ot the Total Environment, v. 954, 176406, https://doi.org/10.1016/j.scitotenv.2024.176406.","productDescription":"176406","ipdsId":"IP-159656","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":462405,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"954","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Slabe, Vincent","contributorId":205309,"corporation":false,"usgs":false,"family":"Slabe","given":"Vincent","affiliations":[{"id":37080,"text":"West Virginia University, Division of Forestry and Natural Resources","active":true,"usgs":false}],"preferred":false,"id":914331,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Warner, Kevin","contributorId":245118,"corporation":false,"usgs":false,"family":"Warner","given":"Kevin","affiliations":[],"preferred":false,"id":914332,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Duran, Zoe K. T.","contributorId":245283,"corporation":false,"usgs":false,"family":"Duran","given":"Zoe","email":"","middleInitial":"K. T.","affiliations":[{"id":49127,"text":"Idaho Army National Guard","active":true,"usgs":false}],"preferred":false,"id":914333,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Pilliod, David S. 0000-0003-4207-3518","orcid":"https://orcid.org/0000-0003-4207-3518","contributorId":229349,"corporation":false,"usgs":true,"family":"Pilliod","given":"David S.","affiliations":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":914334,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Ortiz, Patricia","contributorId":333805,"corporation":false,"usgs":false,"family":"Ortiz","given":"Patricia","affiliations":[{"id":79978,"text":"USFWS (former USGS)","active":true,"usgs":false}],"preferred":false,"id":914335,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Schmidt, Diane","contributorId":344609,"corporation":false,"usgs":false,"family":"Schmidt","given":"Diane","email":"","affiliations":[{"id":12504,"text":"FRESC","active":true,"usgs":false}],"preferred":false,"id":914336,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Szabo, Shawn","contributorId":343441,"corporation":false,"usgs":false,"family":"Szabo","given":"Shawn","email":"","affiliations":[],"preferred":false,"id":914337,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Katzner, Todd E. 0000-0003-4503-8435 tkatzner@usgs.gov","orcid":"https://orcid.org/0000-0003-4503-8435","contributorId":191353,"corporation":false,"usgs":true,"family":"Katzner","given":"Todd E.","email":"tkatzner@usgs.gov","affiliations":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":914338,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70258656,"text":"sir20245074 - 2024 - Evaluation and review of ecology-focused stream studies to support cooperative monitoring, Fountain Creek Basin, Colorado","interactions":[],"lastModifiedDate":"2025-12-23T22:12:00.330021","indexId":"sir20245074","displayToPublicDate":"2024-09-24T13:10:00","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-5074","displayTitle":"Evaluation and Review of Ecology-Focused Stream Studies to Support Cooperative Monitoring, Fountain Creek Basin, Colorado","title":"Evaluation and review of ecology-focused stream studies to support cooperative monitoring, Fountain Creek Basin, Colorado","docAbstract":"<p>The U.S. Geological Survey, in cooperation with Colorado Springs Utilities and Colorado Springs Stormwater Enterprise, synthesized previous studies and evaluated recent monitoring data to understand the distribution of fish and invertebrates in the Fountain Creek Basin and documented response to streamflow, water temperature, and water quality. The goal was to identify opportunities for aligning data collection to help maximize information gained from additional monitoring. Fifty-two publications were compiled from the literature that were completed within the study area between 1964 and 2022. Of these publications, 19 were fish and invertebrate focused. Overall, the distribution of fish and invertebrates in the Fountain Creek Basin has changed since the early 1900s. The occurrence of several fish species has increased or decreased since 2003, and a few species have not been collected in more than 100 years. Several mayfly, stonefly, and caddisfly taxa once common at several locations before 2000 are now rarely encountered, and those that now occur more frequently are associated with warmer-water streams. Decreasing invertebrate multimetric index values were noted at six locations, and the invasive <i>Potamopyrgus antipodarum</i> (New Zealand mud snail) is now established at two locations and occurs at several others, but in low numbers. Various streamflow characteristics were frequently noted to affect spatial and temporal patterns in fish and invertebrate communities, including early development and recruitment of <i>Platygobio gracilis</i> (flathead chub). Water quality and temperature contributed to patterns in aquatic communities, but less is known about the direct effects as these data were inconsistently available. Reach-scale habitat also contributed to patterns in aquatic communities, especially measures associated with the streambank, stream channel, and composition of streambed substrate. Moving forward, aligning consistent streamflow, water temperature, water quality, and geomorphic data collection at fish-, invertebrate-, and habitat-monitoring locations could maximize information gained from monitoring efforts and potentially inform evolving management activities and interests within the basin.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20245074","collaboration":"Prepared in cooperation with Colorado Springs Utilities and Colorado Springs Stormwater Enterprise","usgsCitation":"Zuellig, R.E., Wahl, C.F., Hennessy, E.K., Jouney, A., and Foutz, P., 2024, Evaluation and review of ecology-focused stream studies to support cooperative monitoring, Fountain Creek Basin, Colorado: U.S. Geological Survey Scientific Investigations Report 2024–5074, 30 p., https://doi.org/10.3133/sir20245074.","productDescription":"Report: vii, 30 p.; Data Release","onlineOnly":"Y","ipdsId":"IP-158983","costCenters":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"links":[{"id":497958,"rank":7,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_117504.htm","linkFileType":{"id":5,"text":"html"}},{"id":462209,"rank":6,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/sir20245074/full","text":"Report","linkFileType":{"id":5,"text":"html"},"description":"SIR 2024-5074"},{"id":462156,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2024/5074/images"},{"id":462112,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P91QQ6GT","text":"USGS data release","linkHelpText":"Datasets for Evaluation and Review of Ecology-Focused Stream Studies, Fountain Creek Basin, Colorado"},{"id":462111,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2024/5074/sir20245074.pdf","text":"Report","size":"2.22 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2024-5074"},{"id":462110,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2024/5074/coverthb.jpg"},{"id":462157,"rank":5,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2024/5074/sir20245074.xml"}],"country":"United States","state":"Colorado","otherGeospatial":"Fountain Creek Basin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -105.45322123672925,\n              39.26331261795599\n            ],\n            [\n              -105.45322123672925,\n              38.0924698636114\n            ],\n            [\n              -104.3145085834951,\n              38.0924698636114\n            ],\n            [\n              -104.3145085834951,\n              39.26331261795599\n            ],\n            [\n              -105.45322123672925,\n              39.26331261795599\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/co-water/\" data-mce-href=\"https://www.usgs.gov/centers/co-water/\">Colorado Water Science Center</a><br>U.S. Geological Survey<br>Box 25046, Mail Stop 415<br>Denver, CO 80225</p>","tableOfContents":"<ul><li>Acknowledgments </li><li>Abstract</li><li>Introduction</li><li>Methods</li><li>Supplemental Evaluation and Review of Ecology-Focused Stream Studies</li><li>Major Results</li><li>Summary</li><li>References Cited</li><li>Appendix 1. References from Literature Review</li></ul>","publishedDate":"2024-09-24","noUsgsAuthors":false,"publicationDate":"2024-09-24","publicationStatus":"PW","contributors":{"authors":[{"text":"Zuellig, Robert E. 0000-0002-4784-2905 rzuellig@usgs.gov","orcid":"https://orcid.org/0000-0002-4784-2905","contributorId":1620,"corporation":false,"usgs":true,"family":"Zuellig","given":"Robert","email":"rzuellig@usgs.gov","middleInitial":"E.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913575,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wahl, Charles F. 0000-0003-3411-851X","orcid":"https://orcid.org/0000-0003-3411-851X","contributorId":335253,"corporation":false,"usgs":true,"family":"Wahl","given":"Charles","email":"","middleInitial":"F.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913576,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hennessy, Erin K. 0000-0003-3436-0699","orcid":"https://orcid.org/0000-0003-3436-0699","contributorId":300634,"corporation":false,"usgs":true,"family":"Hennessy","given":"Erin","email":"","middleInitial":"K.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913577,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Jouney, Alex","contributorId":344346,"corporation":false,"usgs":false,"family":"Jouney","given":"Alex","email":"","affiliations":[{"id":39887,"text":"Colorado Parks and Wildlife","active":true,"usgs":false}],"preferred":false,"id":913578,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Foutz, Paul","contributorId":344347,"corporation":false,"usgs":false,"family":"Foutz","given":"Paul","email":"","affiliations":[{"id":39887,"text":"Colorado Parks and Wildlife","active":true,"usgs":false}],"preferred":false,"id":913579,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70263170,"text":"70263170 - 2024 - Historical and morphological evidence for a remnant population of Lake Erie cisco Coregonus artedi (albus) in Crystal Lake, Pennsylvania","interactions":[],"lastModifiedDate":"2025-01-30T16:22:17.166315","indexId":"70263170","displayToPublicDate":"2024-09-24T10:15:30","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2330,"text":"Journal of Great Lakes Research","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Historical and morphological evidence for a remnant population of Lake Erie cisco <i>Coregonus artedi (albus)</i> in Crystal Lake, Pennsylvania","title":"Historical and morphological evidence for a remnant population of Lake Erie cisco Coregonus artedi (albus) in Crystal Lake, Pennsylvania","docAbstract":"<p><span>The cisco (</span><i>Coregonus artedi</i><span>) population in Crystal Lake, Pennsylvania, is of great scientific interest as it either originated from Lake Erie or Lake Ontario. Cisco in Lake Erie once supported the largest freshwater fishery in the world, but populations were extirpated by 1960. We conducted a morphological analysis of Crystal Lake cisco to determine whether it was consistent with a distinctive Lake Erie form (</span><i>albus</i><span>), which was also historically documented, albeit rarely, in western Lake Ontario. Using principal component analysis, we compared eight morphometric ratios and one meristic from our Crystal Lake cisco collection with historical and contemporary collections of cisco from Lakes Erie and Ontario. Maximum likelihood ellipse overlaps between Crystal Lake cisco and presumed&nbsp;</span><i>albus</i><span>&nbsp;(the dominant Lake Erie form prior to extirpation) collections averaged 54%. For all groups, the greatest morphological overlap (73.9%) occurred between Crystal Lake and 1957 Lake Erie cisco, which only differed from Crystal Lake cisco in dorsal fin length. Alternatively, overlap between Crystal Lake cisco and all other Lake Ontario collections averaged 3.2%. Our results demonstrate that Crystal Lake cisco are likely an&nbsp;</span><i>albus</i><span>&nbsp;form; furthermore, historical documentation and our morphological results suggest a Lake Erie origin. Substantial overlap between Crystal Lake cisco and Lake Ontario&nbsp;</span><i>albus</i><span>&nbsp;collected in 1917 is likely explained by continuous entrainment of Lake Erie larvae into Lake Ontario. We suspect this created an&nbsp;</span><i>albus</i><span>&nbsp;metapopulation spanning Lakes Erie and Ontario, yet&nbsp;</span><i>albus</i><span>&nbsp;are no longer observed in either lake today.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jglr.2024.102407","usgsCitation":"Schmitt, J., Fischer, D., Kao, Y., Frey, A., Chalupnicki, M., McKenna, J.E., Phillips, K., Dufour, M.R., Kraus, R., and Eshenroder, R.L., 2024, Historical and morphological evidence for a remnant population of Lake Erie cisco Coregonus artedi (albus) in Crystal Lake, Pennsylvania: Journal of Great Lakes Research, v. 50, no. 5, 102407, 10 p., https://doi.org/10.1016/j.jglr.2024.102407.","productDescription":"102407, 10 p.","ipdsId":"IP-157966","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":489856,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"http://dx.doi.org/10.1016/j.jglr.2024.102407","text":"Publisher Index Page"},{"id":481509,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Pennsylvania","otherGeospatial":"Crystal Lake","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -75.5439783458529,\n              41.64664146749939\n            ],\n            [\n              -75.5439783458529,\n              41.632376138207945\n            ],\n            [\n              -75.52974900812394,\n              41.632376138207945\n            ],\n            [\n              -75.52974900812394,\n              41.64664146749939\n            ],\n            [\n              -75.5439783458529,\n              41.64664146749939\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"50","issue":"5","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Schmitt, Joseph 0000-0002-8354-4067","orcid":"https://orcid.org/0000-0002-8354-4067","contributorId":221020,"corporation":false,"usgs":true,"family":"Schmitt","given":"Joseph","email":"","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":925745,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fischer, Douglas P.","contributorId":342445,"corporation":false,"usgs":false,"family":"Fischer","given":"Douglas P.","affiliations":[{"id":36966,"text":"Pennsylvania Fish and Boat Commission","active":true,"usgs":false}],"preferred":false,"id":925746,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kao, Yu-Chun","contributorId":35626,"corporation":false,"usgs":false,"family":"Kao","given":"Yu-Chun","affiliations":[{"id":6649,"text":"University of Michigan, School of Natural Resources and Environment","active":true,"usgs":false}],"preferred":false,"id":925747,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Frey, Aaron","contributorId":350337,"corporation":false,"usgs":false,"family":"Frey","given":"Aaron","affiliations":[{"id":36966,"text":"Pennsylvania Fish and Boat Commission","active":true,"usgs":false}],"preferred":false,"id":925748,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Chalupnicki, Marc 0000-0002-3792-9345","orcid":"https://orcid.org/0000-0002-3792-9345","contributorId":242991,"corporation":false,"usgs":true,"family":"Chalupnicki","given":"Marc","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":925749,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"McKenna, James E. Jr. 0000-0002-1428-7597 jemckenna@usgs.gov","orcid":"https://orcid.org/0000-0002-1428-7597","contributorId":195894,"corporation":false,"usgs":true,"family":"McKenna","given":"James","suffix":"Jr.","email":"jemckenna@usgs.gov","middleInitial":"E.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":925750,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Phillips, Kristy 0000-0001-8378-0660","orcid":"https://orcid.org/0000-0001-8378-0660","contributorId":204292,"corporation":false,"usgs":true,"family":"Phillips","given":"Kristy","email":"","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":925751,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Dufour, Mark Richard 0000-0001-6930-7666","orcid":"https://orcid.org/0000-0001-6930-7666","contributorId":291450,"corporation":false,"usgs":true,"family":"Dufour","given":"Mark","email":"","middleInitial":"Richard","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":925754,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Kraus, Richard 0000-0003-4494-1841","orcid":"https://orcid.org/0000-0003-4494-1841","contributorId":216548,"corporation":false,"usgs":true,"family":"Kraus","given":"Richard","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":925752,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Eshenroder, Randy L.","contributorId":177867,"corporation":false,"usgs":false,"family":"Eshenroder","given":"Randy","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":925753,"contributorType":{"id":1,"text":"Authors"},"rank":10}]}}
,{"id":70258644,"text":"ofr20241058 - 2024 - ECCOE Landsat quarterly Calibration and Validation report—Quarter 1, 2024","interactions":[],"lastModifiedDate":"2024-12-11T16:14:18.560022","indexId":"ofr20241058","displayToPublicDate":"2024-09-24T09:48:42","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-1058","displayTitle":"ECCOE Landsat Quarterly Calibration and Validation Report—Quarter 1, 2024","title":"ECCOE Landsat quarterly Calibration and Validation report—Quarter 1, 2024","docAbstract":"<h1>Executive Summary&nbsp;</h1><p>The U.S. Geological Survey Earth Resources Observation and Science Calibration and Validation (Cal/Val) Center of Excellence (ECCOE) focuses on improving the accuracy, precision, calibration, and product quality of remote-sensing data, leveraging years of multiscale optical system geometric and radiometric calibration and characterization experience. The ECCOE Landsat Cal/Val Team continually monitors the geometric and radiometric performance of active Landsat missions and makes calibration adjustments, as needed, to maintain data quality at the highest level.</p><p>This report provides observed geometric and radiometric analysis results for Landsats 8 and 9 for quarter 1 (January–March), 2024. All data used to compile the Cal/Val analysis results presented in this report are freely available from the U.S. Geological Survey EarthExplorer website:<br><a data-mce-href=\"https://earthexplorer.usgs.gov\" href=\"https://earthexplorer.usgs.gov\">https://earthexplorer.usgs.gov</a>.</p><p>This quarterly report is the third to include analysis results for Landsat 9, which was launched in September 2021. The inclusion of Landsat 9 analysis results was dependent on two factors: a complete reprocessing of the Landsat 9 data archive and enough time elapsing to begin formulating lifetime trends. In April 2023, all Landsat 9 image data acquired since the satellite’s launch were reprocessed to take advantage of calibration updates identified by the ECCOE Landsat Cal/Val Team. Additional information about the Landsat 9 reprocessing effort is available at <a data-mce-href=\"https://www.usgs.gov/landsat-missions/news/upcoming-reprocessing-all-landsat-9-data\" href=\"https://www.usgs.gov/landsat-missions/news/upcoming-reprocessing-all-landsat-9-data\">https://www.usgs.gov/landsat-missions/news/upcoming-reprocessing-all-landsat-9-data</a>. Additional information about Landsat 9 prelaunch, commissioning, and early on-orbit imaging performance is available at <a data-mce-href=\"https://www.mdpi.com/journal/remotesensing/special_issues/15B4V2K92K\" href=\"https://www.mdpi.com/journal/remotesensing/special_issues/15B4V2K92K\">https://www.mdpi.com/journal/remotesensing/special_issues/15B4V2K92K</a>.</p><p>This quarterly report is the first to not include analysis results for Landsat 7 because Enhanced Thematic Mapper Plus imaging was suspended on January 19, 2024, after the satellite transitioned into full sunlight. The satellite has been drifting since early 2022 after being lowered from the nominal orbit altitude, and the transition into full sunlight is a result of the satellite operating in its extended science mission. Additional information about the imaging suspension is available at <a data-mce-href=\"https://www.usgs.gov/landsat-missions/news/landsat-7-imaging-suspended\" href=\"https://www.usgs.gov/landsat-missions/news/landsat-7-imaging-suspended\">https://www.usgs.gov/landsat-missions/news/landsat-7-imaging-suspended</a>. Additional information about the Landsat 7 extended science mission is available at <a data-mce-href=\"https://www.usgs.gov/landsat-missions/landsat-7-extended-science-mission\" href=\"https://www.usgs.gov/landsat-missions/landsat-7-extended-science-mission\">https://www.usgs.gov/landsat-missions/landsat-7-extended-science-mission</a>.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20241058","usgsCitation":"Haque, M.O., Hasan, M.N., Shrestha, A., Rengarajan, R., Lubke, M., Shaw, J.L., Ruslander, K., Micijevic, E., Choate, M.J., Anderson, C., Clauson, J., Thome, K., Barsi, J., Kaita, E., Levy, R., Miller, J., and Ding, L., 2024, ECCOE Landsat quarterly Calibration and Validation report—Quarter 1, 2024 (ver. 1.1, December 2024): U.S. Geological Survey Open-File Report 2024–1058, 57 p., https://doi.org/10.3133/ofr20241058.","productDescription":"Report: viii, 57 p.; Dataset","numberOfPages":"70","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-165326","costCenters":[{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true}],"links":[{"id":439140,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/of/2024/1058/images/"},{"id":439137,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2024/1058/coverthb2.jpg"},{"id":439138,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2024/1058/ofr20241058.pdf","text":"Report","size":"5 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2024–1058"},{"id":439139,"rank":3,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/of/2024/1058/ofr20241058.XML"},{"id":439141,"rank":5,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/ofr20241058/full"},{"id":439142,"rank":6,"type":{"id":28,"text":"Dataset"},"url":"https://earthexplorer.usgs.gov/","text":"USGS database","linkHelpText":"- EarthExplorer"},{"id":464902,"rank":7,"type":{"id":25,"text":"Version History"},"url":"https://pubs.usgs.gov/of/2024/1058/versionHist.txt","size":"1 KB","linkFileType":{"id":2,"text":"txt"}}],"edition":"Version 1.0: September 24, 2024; Version 1.1: December 11, 2024","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/eros\" data-mce-href=\"https://www.usgs.gov/centers/eros\">Earth Resources Observation and Science Center</a><br>U.S. Geological Survey<br>47914 252nd Street<br>Sioux Falls, SD 57198</p><p><a href=\"https://pubs.usgs.gov/contact\" data-mce-href=\"../contact\">Contact Pubs Warehouse</a></p>","tableOfContents":"<ul><li>Executive Summary</li><li>Introduction</li><li>Landsat 9 Radiometric Performance Summary</li><li>Landsat 9 Geometric Performance Summary</li><li>Landsat 8 Radiometric Performance Summary</li><li>Landsat 8 Geometric Performance Summary</li><li>Quarterly Level 2 Validation Results</li><li>Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"publishedDate":"2024-09-24","revisedDate":"2024-12-11","noUsgsAuthors":false,"publicationDate":"2024-09-24","publicationStatus":"PW","contributors":{"authors":[{"text":"Haque, Md Obaidul 0000-0002-0914-1446","orcid":"https://orcid.org/0000-0002-0914-1446","contributorId":290335,"corporation":false,"usgs":false,"family":"Haque","given":"Md Obaidul","affiliations":[{"id":54490,"text":"KBR, Inc., under contract to USGS","active":true,"usgs":false}],"preferred":false,"id":913507,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hasan, Nahid 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0000-0003-1860-7110","orcid":"https://orcid.org/0000-0003-1860-7110","contributorId":242014,"corporation":false,"usgs":false,"family":"Rengarajan","given":"Rajagopalan","affiliations":[{"id":48475,"text":"KBR, Contractor to USGS EROS","active":true,"usgs":false}],"preferred":false,"id":913510,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Lubke, Mark 0000-0002-7257-2337","orcid":"https://orcid.org/0000-0002-7257-2337","contributorId":261911,"corporation":false,"usgs":false,"family":"Lubke","given":"Mark","email":"","affiliations":[{"id":53079,"text":"KBR, contractor to U.S. Geological Survey","active":true,"usgs":false}],"preferred":false,"id":913511,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Shaw, Jerad L. 0000-0002-8319-2778","orcid":"https://orcid.org/0000-0002-8319-2778","contributorId":270396,"corporation":false,"usgs":false,"family":"Shaw","given":"Jerad L.","affiliations":[{"id":40546,"text":"KBR, Contractor to the USGS Earth Resources Observation and Science (EROS) Center","active":true,"usgs":false}],"preferred":false,"id":913512,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Ruslander, Kathryn 0000-0003-3036-1731","orcid":"https://orcid.org/0000-0003-3036-1731","contributorId":330181,"corporation":false,"usgs":false,"family":"Ruslander","given":"Kathryn","affiliations":[{"id":54490,"text":"KBR, Inc., under contract to USGS","active":true,"usgs":false}],"preferred":false,"id":913513,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Micijevic, Esad 0000-0002-3828-9239 emicijevic@usgs.gov","orcid":"https://orcid.org/0000-0002-3828-9239","contributorId":3075,"corporation":false,"usgs":true,"family":"Micijevic","given":"Esad","email":"emicijevic@usgs.gov","affiliations":[{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true}],"preferred":true,"id":913514,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Choate, Michael J. 0000-0002-8101-4994","orcid":"https://orcid.org/0000-0002-8101-4994","contributorId":251780,"corporation":false,"usgs":true,"family":"Choate","given":"Michael J.","affiliations":[{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true}],"preferred":true,"id":913515,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Anderson, Cody 0000-0001-5612-1889 chanderson@usgs.gov","orcid":"https://orcid.org/0000-0001-5612-1889","contributorId":195521,"corporation":false,"usgs":true,"family":"Anderson","given":"Cody","email":"chanderson@usgs.gov","affiliations":[{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true}],"preferred":true,"id":913516,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Clauson, Jeff 0000-0003-3406-4988 jclauson@usgs.gov","orcid":"https://orcid.org/0000-0003-3406-4988","contributorId":5230,"corporation":false,"usgs":true,"family":"Clauson","given":"Jeff","email":"jclauson@usgs.gov","affiliations":[{"id":54490,"text":"KBR, Inc., under contract to USGS","active":true,"usgs":false}],"preferred":true,"id":913517,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Thome, Kurt","contributorId":140792,"corporation":false,"usgs":false,"family":"Thome","given":"Kurt","email":"","affiliations":[{"id":7049,"text":"NASA Goddard Space Flight Center","active":true,"usgs":false}],"preferred":false,"id":913518,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Barsi, Julia","contributorId":251781,"corporation":false,"usgs":false,"family":"Barsi","given":"Julia","email":"","affiliations":[{"id":50397,"text":"SSAI","active":true,"usgs":false}],"preferred":false,"id":913519,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Kaita, Ed","contributorId":251782,"corporation":false,"usgs":false,"family":"Kaita","given":"Ed","email":"","affiliations":[{"id":50397,"text":"SSAI","active":true,"usgs":false}],"preferred":false,"id":913520,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Levy, Raviv","contributorId":131008,"corporation":false,"usgs":false,"family":"Levy","given":"Raviv","email":"","affiliations":[{"id":7209,"text":"SSAI / NASA / GSFC","active":true,"usgs":false}],"preferred":false,"id":913521,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Miller, Jeff","contributorId":204570,"corporation":false,"usgs":false,"family":"Miller","given":"Jeff","email":"","affiliations":[{"id":36245,"text":"NPS","active":true,"usgs":false}],"preferred":false,"id":913522,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Ding, Leibo","contributorId":330182,"corporation":false,"usgs":false,"family":"Ding","given":"Leibo","email":"","affiliations":[{"id":78842,"text":"SSAI, under contract to NASA","active":true,"usgs":false}],"preferred":false,"id":913523,"contributorType":{"id":1,"text":"Authors"},"rank":17}]}}
,{"id":70259221,"text":"70259221 - 2024 - Influences of meteorological conditions, runoff, and bathymetry on summer thermal regime of a Great Lakes estuary","interactions":[],"lastModifiedDate":"2024-10-02T14:34:21.031908","indexId":"70259221","displayToPublicDate":"2024-09-24T09:28:03","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2330,"text":"Journal of Great Lakes Research","active":true,"publicationSubtype":{"id":10}},"title":"Influences of meteorological conditions, runoff, and bathymetry on summer thermal regime of a Great Lakes estuary","docAbstract":"<p><span>To better understand the primary drivers of the thermal regime in a Great Lakes estuary, and their implications for local biota, water temperature variations in the Milwaukee Estuary of Lake Michigan were studied between July and October of 2019 using a network of 25 sensors at 18 locations. Like Lake Michigan, the estuary was thermally stratified July to October, and historically dredged channels with water depths greater than 6&nbsp;m allowed for the free movement of cold lake water into the estuary. However, temperatures in the estuary fluctuated rapidly both spatially and temporally, reflecting lake temperature fluctuations driven by changing meteorological conditions. Lake-driven upwelling and downwelling events influenced water temperature more than tributary contributions. Periodic upwelling and downwelling events caused temperature changes by up to 15&nbsp;°C in less than 24&nbsp;h. Nearshore upwelling events occasionally allowed cold, hypolimnetic lake water to reach tributary portions of the estuary beyond dredged areas, while downwelling events disrupted thermal stratification and caused the deep, dredged portions of the estuary to exceed 20&nbsp;°C. Thermal impacts from these events were especially noticeable in transition zones between dredged and not dredged channels less than 2&nbsp;m deep. The warming effects from downwelling persisted longer inside the estuary – up to two weeks – than cooling effects from upwelling, which typically lasted a few days. The predominantly lake-driven, rapid summer water temperature fluctuations observed in the Milwaukee Estuary serve as an important consideration in habitat restoration activities happening in Great Lakes estuaries.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jglr.2024.102416","usgsCitation":"Stefaniak, O.M., Fitzpatrick, F., Dow, B.A., Blount, J.D., Sullivan, D.J., and Reneau, P., 2024, Influences of meteorological conditions, runoff, and bathymetry on summer thermal regime of a Great Lakes estuary: Journal of Great Lakes Research, v. 50, no. 5, 102416, 14 p., https://doi.org/10.1016/j.jglr.2024.102416.","productDescription":"102416, 14 p.","ipdsId":"IP-141345","costCenters":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"links":[{"id":466904,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.jglr.2024.102416","text":"Publisher Index Page"},{"id":462484,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Wisconsin","otherGeospatial":"Milwaukee Estuary","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -87.9583,\n              43.0667\n            ],\n            [\n              -87.9583,\n              43\n            ],\n            [\n              -87.89167,\n              43\n            ],\n            [\n              -87.89167,\n              43.0667\n            ],\n            [\n              -87.9583,\n              43.0667\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"50","issue":"5","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Stefaniak, Owen M. 0000-0001-5394-8338 ostefaniak@usgs.gov","orcid":"https://orcid.org/0000-0001-5394-8338","contributorId":271143,"corporation":false,"usgs":true,"family":"Stefaniak","given":"Owen","email":"ostefaniak@usgs.gov","middleInitial":"M.","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914519,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fitzpatrick, Faith 0000-0002-9748-7075","orcid":"https://orcid.org/0000-0002-9748-7075","contributorId":209540,"corporation":false,"usgs":true,"family":"Fitzpatrick","given":"Faith","email":"","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914520,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Dow, Brennan A.","contributorId":344687,"corporation":false,"usgs":false,"family":"Dow","given":"Brennan","email":"","middleInitial":"A.","affiliations":[{"id":6913,"text":"Wisconsin Department of Natural Resources","active":true,"usgs":false}],"preferred":false,"id":914521,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Blount, James D. 0000-0002-0006-3947 jblount@usgs.gov","orcid":"https://orcid.org/0000-0002-0006-3947","contributorId":200231,"corporation":false,"usgs":true,"family":"Blount","given":"James","email":"jblount@usgs.gov","middleInitial":"D.","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914522,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Sullivan, Daniel J. 0000-0003-2705-3738","orcid":"https://orcid.org/0000-0003-2705-3738","contributorId":204322,"corporation":false,"usgs":true,"family":"Sullivan","given":"Daniel","email":"","middleInitial":"J.","affiliations":[{"id":677,"text":"Wisconsin Water Science Center","active":true,"usgs":true},{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914523,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Reneau, Paul 0000-0002-1335-7573","orcid":"https://orcid.org/0000-0002-1335-7573","contributorId":217293,"corporation":false,"usgs":true,"family":"Reneau","given":"Paul","affiliations":[{"id":677,"text":"Wisconsin Water Science Center","active":true,"usgs":true}],"preferred":true,"id":914524,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70259283,"text":"70259283 - 2024 - Long-term distributed temperature sensing monitoring for near-wellbore gas migration and gas hydrate formation","interactions":[],"lastModifiedDate":"2024-11-25T14:17:16.586869","indexId":"70259283","displayToPublicDate":"2024-09-24T09:27:46","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3325,"text":"SPE Journal","active":true,"publicationSubtype":{"id":10}},"title":"Long-term distributed temperature sensing monitoring for near-wellbore gas migration and gas hydrate formation","docAbstract":"<p><span>Well integrity monitoring has always been a critical component of subsurface oil and gas operations. Distributed fiber-optic sensing is an emerging technology that shows great promise for monitoring processes, both in boreholes and in other settings. In this study, we present a case study of using distributed temperature sensing (DTS) technology to monitor a cemented and plugged well in the Alaska North Slope (ANS). The well was drilled as part of a long-term gas hydrate study, and the downhole DTS data were recorded over a period of approximately 2 years. By applying a temporal gradient and removing instrument instability noise, we reveal subtle (&lt;0.001°C/h) thermal anomalies, which are characterized by brief warming periods followed by longer cooling periods at discrete depths along the borehole. The observed coherent events show an upward trajectory from deeper formations into the overlying permafrost interval, with the thermal anomalies concentrated in relatively coarse-grained sandstone layers. We also observe that the upward migration rate of the DTS anomalies varies with formation lithology and that there is a spatial and temporal correlation between the subsurface events and measured wellhead annular pressures. We interpret that the observed warming events represent the exothermic process of gas hydrate formation that is occurring in association with the upward migration of gas outside the well casing, and this interpretation is confirmed by numerical simulations. These observations demonstrate the ability of suitably processed DTS data to detect subtle processes and highlight the value of DTS technologies for wellbore integrity monitoring.</span></p>","language":"English","publisher":"Society of Petroleum Engineers","doi":"10.2118/223111-PA","usgsCitation":"Garcia-Ceballos, A., Jin, G., Collett, T., Merey, S., and Haines, S.S., 2024, Long-term distributed temperature sensing monitoring for near-wellbore gas migration and gas hydrate formation: SPE Journal, v. 29, no. 11, p. 5804-5819, https://doi.org/10.2118/223111-PA.","productDescription":"16 p.","startPage":"5804","endPage":"5819","ipdsId":"IP-162957","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":498024,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.2118/223111-pa","text":"Publisher Index Page"},{"id":464441,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","otherGeospatial":"North Slope","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -151,\n              71\n            ],\n            [\n              -151,\n              70\n            ],\n            [\n              -148,\n              70\n            ],\n            [\n              -148,\n              71\n            ],\n            [\n              -151,\n              71\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"29","issue":"11","noUsgsAuthors":false,"publicationDate":"2024-09-24","publicationStatus":"PW","contributors":{"authors":[{"text":"Garcia-Ceballos, Ana","contributorId":333715,"corporation":false,"usgs":false,"family":"Garcia-Ceballos","given":"Ana","email":"","affiliations":[],"preferred":false,"id":914769,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jin, Ge","contributorId":333716,"corporation":false,"usgs":false,"family":"Jin","given":"Ge","email":"","affiliations":[],"preferred":false,"id":914770,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Collett, Timothy 0000-0002-7598-4708","orcid":"https://orcid.org/0000-0002-7598-4708","contributorId":220812,"corporation":false,"usgs":true,"family":"Collett","given":"Timothy","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":914771,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Merey, Sukru","contributorId":344807,"corporation":false,"usgs":false,"family":"Merey","given":"Sukru","email":"","affiliations":[{"id":82412,"text":"Batman University","active":true,"usgs":false}],"preferred":false,"id":914772,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Haines, Seth S. 0000-0003-2611-8165 shaines@usgs.gov","orcid":"https://orcid.org/0000-0003-2611-8165","contributorId":1344,"corporation":false,"usgs":true,"family":"Haines","given":"Seth","email":"shaines@usgs.gov","middleInitial":"S.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true},{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true},{"id":255,"text":"Energy Resources Program","active":true,"usgs":true}],"preferred":true,"id":914773,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70258727,"text":"70258727 - 2024 - Parasite abundance-occupancy relationships across biogeographic regions: Joint effects of niche breadth, host availability and climate","interactions":[],"lastModifiedDate":"2024-12-26T16:46:26.036627","indexId":"70258727","displayToPublicDate":"2024-09-24T06:55:52","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2193,"text":"Journal of Biogeography","active":true,"publicationSubtype":{"id":10}},"title":"Parasite abundance-occupancy relationships across biogeographic regions: Joint effects of niche breadth, host availability and climate","docAbstract":"<p>Changing biodiversity and environmental conditions may allow multi-host pathogens to spread among host species and affect prevalence. There are several widely acknowledged theories about mechanisms that may influence variation in pathogen prevalence, including the controversially debated dilution effect and abundance-occupancy relationship hypotheses. Here, we explore such abundance-occupancy relationships for unique lineages of three vector-borne avian blood parasite genera (the avian malaria parasite<span>&nbsp;</span><i>Plasmodium</i><span>&nbsp;</span>and the related haemosporidian parasites<span>&nbsp;</span><i>Parahaemoproteus</i><span>&nbsp;</span>and<span>&nbsp;</span><i>Leucocytozoon</i>) across biogeographical regions.</p>","language":"English","publisher":"Wiley","doi":"10.1111/jbi.15015","usgsCitation":"Wells, K., Bell, J.A., Fecchio, A., Drovetski, S.V., Galen, S.C., Hackett, S., Lutz, H.L., Skeen, H., Voelker, G., Wamiti, W., Weckstein, J.D., and Clark, N.J., 2024, Parasite abundance-occupancy relationships across biogeographic regions: Joint effects of niche breadth, host availability and climate: Journal of Biogeography, v. 52, no. 1, p. 55-65, https://doi.org/10.1111/jbi.15015.","productDescription":"11 p.","startPage":"55","endPage":"65","ipdsId":"IP-167631","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true},{"id":50464,"text":"Eastern Ecological Science Center","active":true,"usgs":true}],"links":[{"id":466905,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/jbi.15015","text":"Publisher Index Page"},{"id":462239,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"52","issue":"1","noUsgsAuthors":false,"publicationDate":"2024-09-24","publicationStatus":"PW","contributors":{"authors":[{"text":"Wells, Konstans","contributorId":265392,"corporation":false,"usgs":false,"family":"Wells","given":"Konstans","email":"","affiliations":[{"id":54671,"text":"Department of Biosciences, Swansea University, Swansea, SA2 8PP UK","active":true,"usgs":false}],"preferred":false,"id":913896,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bell, Jeffrey A","contributorId":265373,"corporation":false,"usgs":false,"family":"Bell","given":"Jeffrey","email":"","middleInitial":"A","affiliations":[{"id":52695,"text":"Department of Biology, University of North Dakota, Grand Forks, ND 58201, USA","active":true,"usgs":false}],"preferred":false,"id":913897,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Fecchio, Alan 0000-0002-7319-0234","orcid":"https://orcid.org/0000-0002-7319-0234","contributorId":265372,"corporation":false,"usgs":false,"family":"Fecchio","given":"Alan","email":"","affiliations":[{"id":54651,"text":"Programa de Pós-Graduação em Ecologia e Conservação da Biodiversidade, Universidade Federal de Mato Grosso,  Avenida Fernando Corrêa da Costa 2367, Cuiabá, MT, 78060900, Brazil","active":true,"usgs":false}],"preferred":false,"id":913898,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Drovetski, Sergei V. 0000-0002-1832-5597","orcid":"https://orcid.org/0000-0002-1832-5597","contributorId":229520,"corporation":false,"usgs":true,"family":"Drovetski","given":"Sergei","middleInitial":"V.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":913899,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Galen, Spencer C","contributorId":229671,"corporation":false,"usgs":false,"family":"Galen","given":"Spencer","email":"","middleInitial":"C","affiliations":[],"preferred":false,"id":913900,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hackett, Shannon","contributorId":265389,"corporation":false,"usgs":false,"family":"Hackett","given":"Shannon","email":"","affiliations":[{"id":54668,"text":"The Richard and Jill Chaifetz Associate Curator of Birds, Life Sciences and Pritzker Lab Field Museum of Natural History, 1400 South Lake Shore Drive, Chicago, IL  60605, USA","active":true,"usgs":false}],"preferred":false,"id":913901,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Lutz, Holly L","contributorId":265375,"corporation":false,"usgs":false,"family":"Lutz","given":"Holly","email":"","middleInitial":"L","affiliations":[{"id":54653,"text":"Department of Surgery, University of Chicago, 5812 S. Ellis Ave., Chicago, IL 60637 and Integrative Research Center, Field Museum of Natural History, 1400 South Lake Shore Drive, Chicago, IL 60605 USA","active":true,"usgs":false}],"preferred":false,"id":913902,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Skeen, Heather","contributorId":265374,"corporation":false,"usgs":false,"family":"Skeen","given":"Heather","email":"","affiliations":[{"id":54652,"text":"Committee on Evolutionary Biology, University of Chicago, Chicago, IL, 6063 and Negaunee Integrative Research Center, The Field Museum, Chicago, IL, 60605 USA","active":true,"usgs":false}],"preferred":false,"id":913903,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Voelker, Gary","contributorId":229521,"corporation":false,"usgs":false,"family":"Voelker","given":"Gary","email":"","affiliations":[{"id":6747,"text":"Texas A&M University","active":true,"usgs":false}],"preferred":false,"id":913904,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Wamiti, Wanyoike","contributorId":265381,"corporation":false,"usgs":false,"family":"Wamiti","given":"Wanyoike","email":"","affiliations":[{"id":54660,"text":"Zoology Department, National Museums of Kenya, P.O. Box 40658-00100, Nairobi, Kenya","active":true,"usgs":false}],"preferred":false,"id":913905,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Weckstein, Jason D","contributorId":265391,"corporation":false,"usgs":false,"family":"Weckstein","given":"Jason","email":"","middleInitial":"D","affiliations":[{"id":54670,"text":"Department of Ornithology, Academy of Natural Sciences of Drexel University, Philadelphia, PA 19103, USA and Department of Biodiversity, Earth, and Environmental Sciences, Drexel University, Philadelphia, PA 19103, USA","active":true,"usgs":false}],"preferred":false,"id":913906,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Clark, Nicholas J.","contributorId":204867,"corporation":false,"usgs":false,"family":"Clark","given":"Nicholas","email":"","middleInitial":"J.","affiliations":[{"id":16755,"text":"University of Queensland, Australia","active":true,"usgs":false}],"preferred":false,"id":913907,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70258081,"text":"70258081 - 2024 - The feasibility of using national-scale datasets for classifying wetlands in Arizona with machine learning","interactions":[],"lastModifiedDate":"2024-11-22T16:08:59.048285","indexId":"70258081","displayToPublicDate":"2024-09-23T17:17:05","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1425,"text":"Earth Surface Processes and Landforms","active":true,"publicationSubtype":{"id":10}},"title":"The feasibility of using national-scale datasets for classifying wetlands in Arizona with machine learning","docAbstract":"<p><span>The advent of machine learning techniques has led to a proliferation of landscape classification products. These approaches can fill gaps in wetland inventories across the United States (U.S.) provided that large reference datasets are available to develop accurate models. In this study, we tested the feasibility of expediting the classification process by sourcing requisite training and testing data from existing national-scale land cover maps instead of customized sample sets. We created a single map of water and wetland presence by intersecting water and wetland classes from available land cover products (National Wetland Inventory, Gap Analysis Project, National Land Cover Database and Dynamic Surface Water Extent) across the U.S. state of Arizona, which has fewer wetland-specific mapping products than other parts of the U.S. We derived classified samples for four wetland classes from the combined map: open water, herbaceous wetlands, wooded wetlands and non-wetland cover. In Google Earth Engine, we developed a random forest model that combined the training data with spatial predictor variables, including vegetation greenness indices, wetness indices, seasonal index variation, topographic parameters and vegetation height metrics. Results show that the final model separates the four classes with an overall accuracy of 86.2%. The accuracy suggests that existing datasets can be effectively used to compile machine learning training samples to map wetlands in arid landscapes in the U.S. These methods hold promise for the generation of wetland inventories at more frequent intervals, which could allow more nuanced investigations of wetland change over time in response to anthropogenic and climatic drivers.</span></p>","language":"English","publisher":"Wiley","doi":"10.1002/esp.5985","usgsCitation":"Soulard, C.E., Walker, J., Smith, B.W., and Kreitler, J.R., 2024, The feasibility of using national-scale datasets for classifying wetlands in Arizona with machine learning: Earth Surface Processes and Landforms, v. 49, no. 14, p. 4632-4649, https://doi.org/10.1002/esp.5985.","productDescription":"18 p.","startPage":"4632","endPage":"4649","ipdsId":"IP-158309","costCenters":[{"id":657,"text":"Western Geographic Science 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,{"id":70258672,"text":"gip242 - 2024 - The U.S. Geological Survey National Streamgage Network—2023","interactions":[],"lastModifiedDate":"2025-12-23T22:13:42.116878","indexId":"gip242","displayToPublicDate":"2024-09-23T11:33:40","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":315,"text":"General Information Product","code":"GIP","onlineIssn":"2332-354X","printIssn":"2332-3531","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"242","displayTitle":"The U.S. Geological Survey National Streamgage Network—2023","title":"The U.S. Geological Survey National Streamgage Network—2023","docAbstract":"<p>The U.S. Geological Survey (USGS) operated 11,850 continuous surface-water monitoring locations (streamgages) across the United States in 2023. The streamgages provide information on river height and streamflow, typically at 15-minute intervals. This information is then made available to everyone, most of it delivered nearly in realtime on the USGS National Water Dashboard.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/gip242","usgsCitation":"McCallum, B.E., 2024, The U.S. Geological Survey National Streamgage Network—2023: U.S. Geological Survey General Information Product 242, https://doi.org/10.3133/gip242.","productDescription":"1 p.","onlineOnly":"N","ipdsId":"IP-163973","costCenters":[{"id":37786,"text":"WMA - Observing Systems Division","active":true,"usgs":true}],"links":[{"id":481890,"rank":3,"type":{"id":22,"text":"Related Work"},"url":"https://doi.org/10.3133/gip243","text":"GIP 243","description":"GIP 243","linkHelpText":"— U.S. Geological Survey Groundwater Climate Response Network—2023"},{"id":462132,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/gip/0242/gip242.pdf","text":"Report","size":"1.1 MB","linkFileType":{"id":1,"text":"pdf"},"description":"GIP 242"},{"id":462131,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/gip/0242/gip242.jpg"},{"id":481891,"rank":4,"type":{"id":22,"text":"Related Work"},"url":"https://doi.org/10.3133/gip244","text":"GIP 244","description":"GIP 244","linkHelpText":"— The U.S. Geological Survey National Atmospheric Deposition Program, National Trends Network—2022 (ver. 1.1)"},{"id":481892,"rank":5,"type":{"id":22,"text":"Related Work"},"url":"https://doi.org/10.3133/gip245","text":"GIP 245","description":"GIP 245","linkHelpText":"— The U.S. Geological Survey National Water Quality Network—Surface Water—2023"},{"id":497959,"rank":7,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_117498.htm","linkFileType":{"id":5,"text":"html"}},{"id":481893,"rank":6,"type":{"id":22,"text":"Related Work"},"url":"https://doi.org/10.3133/gip247","text":"GIP 247","description":"GIP 247","linkHelpText":"— The U.S. Geological Survey National Water Quality Network—Groundwater—2023"}],"contact":"<p><a href=\"mailto:bemccall@usgs.gov\" data-mce-href=\"mailto:bemccall@usgs.gov\">National Streamgage Networks Coordinator</a><br><a href=\"https://www.usgs.gov/mission-areas/water-resources/observing-systems-division\" data-mce-href=\"https://www.usgs.gov/mission-areas/water-resources/observing-systems-division\">Observing Systems Division</a><br>Water Mission Area<br>U.S. Geological Survey<br>1770 Corporate Drive, Suite 500<br>Norcross, Georgia 30093</p>","publishedDate":"2024-09-23","noUsgsAuthors":false,"publicationDate":"2024-09-23","publicationStatus":"PW","contributors":{"authors":[{"text":"McCallum, Brian E. 0000-0002-8935-0343 bemccall@usgs.gov","orcid":"https://orcid.org/0000-0002-8935-0343","contributorId":1591,"corporation":false,"usgs":true,"family":"McCallum","given":"Brian","email":"bemccall@usgs.gov","middleInitial":"E.","affiliations":[{"id":13634,"text":"South Atlantic Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913623,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
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One priority established by the program is the need to address degraded ecosystems associated with mine lands, including active, inactive, and abandoned mines. Mine lands occur in every State of the United States and present a range of environmental hazards and safety risks to human communities and wildlife habitats. However, limited information compiled across the United States exists on the whereabouts of mining activities and their potential environmental effects on landscapes. Remote sensing is the process of acquiring information about the landscape from ground platforms, aircraft, or satellites to assess surface characteristics such as topography, vegetation, and soil properties and can therefore provide important cost-effective methods for identifying mining sites and assessing their environmental effects. Based on a literature review of remote sensing applications that assessed land health conditions and monitoring of mine lands, this report highlights important approaches, capabilities, considerations, and case studies using a breadth of techniques. The report identifies considerations for setting appropriate vegetation recovery targets and demonstrates how remote sensing can inform the prioritization, recovery design, and long-term assessments of recovery to help support decision makers and land managers. Applications of remote sensing to mine recovery will be most effective when recovery targets are clearly defined and quantifiable from data collected before mining activity, per the Surface Mining Control and Reclamation Act of 1977 and similar laws. 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         [\n                -95.15609,\n                49.38425\n              ],\n              [\n                -94.81758,\n                49.38905\n              ]\n            ]\n          ]\n        ]\n      },\n      \"properties\": {\n        \"name\": \"United States\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/fort-collins-science-center/\" data-mce-href=\"https://www.usgs.gov/centers/fort-collins-science-center/\"> Fort Collins Science Center</a><br>U.S. Geological Survey<br>2150 Centre Ave., Bldg. C<br>Fort Collins, CO 80526-8118</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Mining Background</li><li>Remote Sensing Supporting Mine Land Recovery</li><li>Recovery Targets and Performance Indicators</li><li>Methods for Literature Review and Examples of Studies Using Remote Sensing for Monitoring Mine Land Recovery</li><li>Summary</li><li>References Cited</li><li>Glossary</li><li>Appendix 1. Eight Example Studies and Literature Review References</li><li>Appendix 2. Selected References and Remote Sensing Tools and Data for Monitoring Mine Lands</li></ul>","publishedDate":"2024-09-23","noUsgsAuthors":false,"publicationDate":"2024-09-23","publicationStatus":"PW","contributors":{"authors":[{"text":"O’Donnell, Michael S. 0000-0002-3488-003X odonnellm@usgs.gov","orcid":"https://orcid.org/0000-0002-3488-003X","contributorId":140876,"corporation":false,"usgs":true,"family":"O’Donnell","given":"Michael","email":"odonnellm@usgs.gov","middleInitial":"S.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":912410,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Whipple, Ashley L. 0000-0002-0304-7643","orcid":"https://orcid.org/0000-0002-0304-7643","contributorId":300552,"corporation":false,"usgs":true,"family":"Whipple","given":"Ashley","email":"","middleInitial":"L.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":912411,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Inman, Richard D. 0000-0002-1982-7791 rdinman@usgs.gov","orcid":"https://orcid.org/0000-0002-1982-7791","contributorId":187754,"corporation":false,"usgs":true,"family":"Inman","given":"Richard","email":"rdinman@usgs.gov","middleInitial":"D.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":912412,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Tarbox, Bryan C. 0000-0001-5040-3949","orcid":"https://orcid.org/0000-0001-5040-3949","contributorId":288930,"corporation":false,"usgs":true,"family":"Tarbox","given":"Bryan","email":"","middleInitial":"C.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":912413,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Monroe, Adrian P. 0000-0003-0934-8225 amonroe@usgs.gov","orcid":"https://orcid.org/0000-0003-0934-8225","contributorId":152209,"corporation":false,"usgs":true,"family":"Monroe","given":"Adrian P.","email":"amonroe@usgs.gov","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":912414,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Robb, Benjamin S. 0000-0003-1419-3918","orcid":"https://orcid.org/0000-0003-1419-3918","contributorId":343926,"corporation":false,"usgs":false,"family":"Robb","given":"Benjamin","email":"","middleInitial":"S.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":912415,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Aldridge, Cameron L. 0000-0003-3926-6941 aldridgec@usgs.gov","orcid":"https://orcid.org/0000-0003-3926-6941","contributorId":191773,"corporation":false,"usgs":true,"family":"Aldridge","given":"Cameron","email":"aldridgec@usgs.gov","middleInitial":"L.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":false,"id":912416,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70258516,"text":"sir20245046 - 2024 - Groundwater and surface-water interactions in the Lower Duwamish Waterway, Seattle, Washington","interactions":[],"lastModifiedDate":"2025-12-23T22:15:55.273826","indexId":"sir20245046","displayToPublicDate":"2024-09-23T08:38:10","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-5046","displayTitle":"Groundwater and Surface-Water Interactions in the Lower Duwamish Waterway, Seattle, Washington","title":"Groundwater and surface-water interactions in the Lower Duwamish Waterway, Seattle, Washington","docAbstract":"<p>The U.S. Geological Survey (USGS), in cooperation with the Washington State Department of Ecology (Ecology), conducted a study to describe the current understanding of the regional groundwater system of the lower Duwamish River valley and groundwater and surface-water interactions in the lower Duwamish Waterway. The lower Duwamish Waterway is the final 5-mile (mi) reach of the Duwamish River before it empties into Elliott Bay in Puget Sound near Seattle, Washington. A nearshore site (hereinafter referred to as “Nearshore Site” to distinguish the particular site from general discussions of nearshore areas) along the western shoreline of the Duwamish River, about 1.5 mi upstream from the river mouth, was selected for focused groundwater data collection by USGS. Data loggers were deployed in seven groundwater wells and one stilling well in the Duwamish River to measure specific conductance, temperature, and depth at 15-minute intervals for a period of about 2 years.</p><p>At the Nearshore Site during 2020–22, water levels in the shallow wells were 3–8 feet (ft) higher than water levels in the deep wells, providing evidence for a low-permeability layer between the shallow and deep aquifers in this area. The shallow wells had a pronounced seasonal variability, with high water levels in winter and low water levels in summer. Data from the deep wells showed far less seasonal variability, with slight increases in winter and a near-constant water level from spring to autumn. The deep wells had a strong hydraulic connection to the Duwamish River, as evidenced by the synchronous water-level variability during the tidal cycle, whereas the shallow wells had minimal to no tidal response. The potentiometric maps developed for the Nearshore Site and surrounding areas indicate large differences in groundwater-flow directions for the shallow and deep aquifers at low and high tides. For the shallow aquifer, flow is toward the lower Duwamish Waterway near the Nearshore Site, regardless of the tidal condition. For the deep aquifer, a potentiometric trough forms parallel to the shoreline during high tide, indicating that groundwater flow converges from the uplands to the west and the Duwamish River to the east. The geometry of the potentiometric surfaces between the nearshore-most well and the shoreline is complex and is further confounded by intermittent shoreline armoring and other buried infrastructure, which could serve as either a barrier or a conduit to flow.</p><p>Groundwater and surface-water interactions in the lower Duwamish Waterway are inherently complex as a result of three overarching factors. First, water levels in the lower reaches of the Duwamish River vary daily by 11–16 ft because of tides from Puget Sound, which create large swings in the hydraulic gradient in the nearshore groundwater system. Second, the density and chemical composition of water in the Duwamish River change daily with the tides and seasonally, which constrains how river water entering the nearshore sediments interacts with discharging groundwater. Third, the nearshore subsurface and shoreline conditions are heterogenous because of extensive shoreline armoring over the past century, which governs the flow of groundwater and infiltrating river water. These unique features of groundwater and surface-water interactions in the lower Duwamish Waterway thus govern the transport of terrestrial contaminants to the lower Duwamish Waterway. Furthermore, the heterogenous aquifer properties in the lower Duwamish Waterway contribute to spatially and temporally dynamic contaminant-transport processes.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20245046","collaboration":"Prepared in cooperation with the Washington State Department of Ecology","usgsCitation":"Mitchell, J.N., and Conn, K.E., 2024, Groundwater and surface-water interactions in the Lower Duwamish Waterway, Seattle, Washington: U.S. Geological Survey Scientific Investigations Report 2024–5046, 43 p., https://doi.org/10.3133/sir20245046.","productDescription":"Report: vi, 43 p.; Data Release","onlineOnly":"Y","ipdsId":"IP-158073","costCenters":[{"id":622,"text":"Washington Water Science Center","active":true,"usgs":true}],"links":[{"id":497961,"rank":7,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_117497.htm","linkFileType":{"id":5,"text":"html"}},{"id":434877,"rank":6,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2024/5046/sir20245046.XML"},{"id":434876,"rank":5,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2024/5046/images"},{"id":434875,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P1F7QX42","text":"USGS data release","description":"USGS data release","linkHelpText":"Data in support of groundwater- and surface-water-interactions report— Groundwater and surface-water interactions in the Lower Duwamish Waterway, Seattle, Washington"},{"id":434874,"rank":3,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/sir20245046/full","linkFileType":{"id":5,"text":"html"},"description":"SIR 2024-5046"},{"id":434873,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2024/5046/sir20245046.pdf","size":"9.6 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2024-5046"},{"id":434872,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2024/5046/sir20245046.jpg"}],"country":"United States","state":"Washington","city":"Seattle","otherGeospatial":"Lower Duwamish Waterway","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -122.45687695827122,\n              47.691936104689205\n            ],\n            [\n              -122.45687695827122,\n              47.28\n            ],\n            [\n              -122,\n              47.28\n            ],\n            [\n              -122,\n              47.691936104689205\n            ],\n            [\n              -122.45687695827122,\n              47.691936104689205\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p><a href=\"mailto:dc_wa@usgs.gov\" data-mce-href=\"mailto:dc_wa@usgs.gov\">Director</a>, <a href=\"https://www.usgs.gov/centers/washington-water-science-center\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/centers/washington-water-science-center\">Washington Water Science Center</a><br>U.S. Geological Survey<br>934 Broadway, Suite 300<br>Tacoma, Washington 98402</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Description of the Study Area</li><li>Data and Methods</li><li>Evaluation of Site-Specific Characteristics in a Nearshore Site</li><li>Regional Conceptual Groundwater Model</li><li>Groundwater and Surface-Water Interactions</li><li>Data Gaps and Uncertainties</li><li>Summary</li><li>References Cited</li></ul>","publishedDate":"2024-09-23","noUsgsAuthors":false,"publicationDate":"2024-09-23","publicationStatus":"PW","contributors":{"authors":[{"text":"Mitchell, Jackson N. 0000-0002-9289-6240 jnmitchell@usgs.gov","orcid":"https://orcid.org/0000-0002-9289-6240","contributorId":207734,"corporation":false,"usgs":true,"family":"Mitchell","given":"Jackson","email":"jnmitchell@usgs.gov","middleInitial":"N.","affiliations":[{"id":622,"text":"Washington Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913329,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Conn, Kathleen E. 0000-0002-2334-6536 kconn@usgs.gov","orcid":"https://orcid.org/0000-0002-2334-6536","contributorId":3923,"corporation":false,"usgs":true,"family":"Conn","given":"Kathleen E.","email":"kconn@usgs.gov","affiliations":[{"id":622,"text":"Washington Water Science Center","active":true,"usgs":true}],"preferred":true,"id":913330,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70265640,"text":"70265640 - 2024 - Hormetic and transcriptomic responses of the toxic alga Prymnesium parvum to glyphosate","interactions":[],"lastModifiedDate":"2025-04-14T15:46:38.153538","indexId":"70265640","displayToPublicDate":"2024-09-22T10:43:49","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Hormetic and transcriptomic responses of the toxic alga <i>Prymnesium parvum</i> to glyphosate","title":"Hormetic and transcriptomic responses of the toxic alga Prymnesium parvum to glyphosate","docAbstract":"<p><span>Growth of the toxic alga&nbsp;</span><i>Prymnesium parvum</i><span>&nbsp;is hormetically stimulated with environmentally relevant concentrations of glyphosate. The mechanisms of glyphosate hormesis in this species, however, are unknown. We evaluated the transcriptomic response of&nbsp;</span><i>P. parvum</i><span>&nbsp;to glyphosate at concentrations that stimulate maximum growth and where growth is not different from control values, the zero-equivalent point (ZEP). Maximum growth occurred at 0.1&nbsp;mg&nbsp;l</span><sup>−1</sup><span>&nbsp;and the ZEP was 2&nbsp;mg&nbsp;l</span><sup>−1</sup><span>. At 0.1&nbsp;mg&nbsp;l</span><sup>−1</sup><span>, upregulated transcripts outnumbered downregulated transcripts by one order of magnitude. Gene Ontology enrichment and Kyoto Encyclopedia of Genes and Genomes pathway analyses indicated that the upregulated transcriptome is primarily associated with metabolism and biosynthesis. Transcripts encoding heat shock proteins and co-chaperones were among the most strongly upregulated, and several others were associated with translation, Redox homeostasis, cell replication, and photosynthesis. Although most of the same transcripts were also upregulated at concentrations ≥ZEP, the proportion of downregulated transcripts greatly increased as glyphosate concentrations increased. At the ZEP, downregulated transcripts were associated with photosynthesis, cell replication, and anion transport, indicating that specific interference with these processes is responsible for the nullification of hormetic growth. Transcripts encoding the herbicidal target of glyphosate, 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS), were upregulated at concentrations ≥ZEP but not at 0.1&nbsp;mg&nbsp;l</span><sup>−1</sup><span>, indicating that disruption of EPSPS activity occurred at high concentrations and that nullification of hormetic growth involves the direct interaction of glyphosate with this enzyme. Results of this study may contribute to a better understanding of glyphosate hormesis and of anthropogenic factors that influence&nbsp;</span><i>P. parvum</i><span>&nbsp;biogeography and bloom formation.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2024.176451","usgsCitation":"Chávez Montesa, R., Mary, M.A., Rashel, R.H., Fokar, M., Herrera-Estrella, L., Lopez-Arredondo, D., and Patino, R., 2024, Hormetic and transcriptomic responses of the toxic alga Prymnesium parvum to glyphosate: Science of the Total Environment, v. 954, 176451, 12 p., https://doi.org/10.1016/j.scitotenv.2024.176451.","productDescription":"176451, 12 p.","ipdsId":"IP-167518","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":484505,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"954","noUsgsAuthors":false,"publicationDate":"2024-09-22","publicationStatus":"PW","contributors":{"authors":[{"text":"Chávez Montesa, Ricardo A.","contributorId":353196,"corporation":false,"usgs":false,"family":"Chávez Montesa","given":"Ricardo A.","affiliations":[{"id":36331,"text":"Texas Tech University","active":true,"usgs":false}],"preferred":false,"id":933155,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mary, Mousumi A.","contributorId":341256,"corporation":false,"usgs":false,"family":"Mary","given":"Mousumi","email":"","middleInitial":"A.","affiliations":[{"id":36331,"text":"Texas Tech University","active":true,"usgs":false}],"preferred":false,"id":933156,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rashel, Rakib H.","contributorId":200015,"corporation":false,"usgs":false,"family":"Rashel","given":"Rakib","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":933157,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Fokar, Mohamed","contributorId":353199,"corporation":false,"usgs":false,"family":"Fokar","given":"Mohamed","affiliations":[{"id":36331,"text":"Texas Tech University","active":true,"usgs":false}],"preferred":false,"id":933158,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Herrera-Estrella, Luis","contributorId":353202,"corporation":false,"usgs":false,"family":"Herrera-Estrella","given":"Luis","affiliations":[{"id":36331,"text":"Texas Tech University","active":true,"usgs":false}],"preferred":false,"id":933159,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Lopez-Arredondo, Damar","contributorId":353205,"corporation":false,"usgs":false,"family":"Lopez-Arredondo","given":"Damar","affiliations":[{"id":36331,"text":"Texas Tech University","active":true,"usgs":false}],"preferred":false,"id":933160,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Patino, Reynaldo 0000-0002-4831-8400 r.patino@usgs.gov","orcid":"https://orcid.org/0000-0002-4831-8400","contributorId":2311,"corporation":false,"usgs":true,"family":"Patino","given":"Reynaldo","email":"r.patino@usgs.gov","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":933161,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70259520,"text":"70259520 - 2024 - Using environmental DNA to assess the response of steelhead/Rainbow Trout and Coastrange Sculpin populations to postfire debris flows in coastal streams of Big Sur, California","interactions":[],"lastModifiedDate":"2025-01-13T16:14:12.955347","indexId":"70259520","displayToPublicDate":"2024-09-22T07:07:22","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"Using environmental DNA to assess the response of steelhead/Rainbow Trout and Coastrange Sculpin populations to postfire debris flows in coastal streams of Big Sur, California","docAbstract":"<div class=\"article-section__content en main\"><h3 id=\"nafm11032-sec-0001-title\" class=\"article-section__sub-title section1\">Objective</h3><p>Debris flows are among the most extreme disturbances to streams and are predicted to become more frequent under climate change. We assessed the response of steelhead<span>&nbsp;</span><i>Oncorhynchus mykiss</i><span>&nbsp;</span>(anadromous Rainbow Trout)/Rainbow Trout (hereafter, collectively referred to as<span>&nbsp;</span><i>O. mykiss</i>) and Coastrange Sculpin<span>&nbsp;</span><i>Cottus aleuticus</i><span>&nbsp;</span>populations to major postfire debris flows in two small coastal basins of California using noninvasive environmental DNA (eDNA) sampling.</p><h3 id=\"nafm11032-sec-0002-title\" class=\"article-section__sub-title section1\">Methods</h3><p>We analyzed water samples from disturbed reaches for eDNA in the first two summers after debris flows. In Big Creek, all Coastrange Sculpin habitat was disturbed by debris flows, but a major tributary occupied by<span>&nbsp;</span><i>O. mykiss</i><span>&nbsp;</span>was not affected. In Mill Creek, all available habitat for both species was disturbed. We also sampled two unburned basins as undisturbed reference streams.</p><h3 id=\"nafm11032-sec-0003-title\" class=\"article-section__sub-title section1\">Result</h3><p>In Big Creek,<span>&nbsp;</span><i>O. mykiss</i><span>&nbsp;</span>eDNA was detected in all water samples during both years, and concentrations in some samples approached the lowest concentrations in the reference streams. Coastrange Sculpin eDNA was detected only in a single water sample in the first year and was not detected in the second year. In Mill Creek, neither species was detected in the first year, but during the second year,<span>&nbsp;</span><i>O. mykiss</i><span>&nbsp;</span>eDNA was detected at very low concentrations in 40% of samples and Coastrange Sculpin eDNA was detected in a single sample.</p><h3 id=\"nafm11032-sec-0004-title\" class=\"article-section__sub-title section1\">Conclusion</h3><p>Our results indicate that<span>&nbsp;</span><i>O. mykiss</i><span>&nbsp;</span>and Coastrange Sculpins either survived in or quickly reoccupied the disturbed reaches from within the basins. However, the detection rates for cases in which all habitat for a species in a basin was affected by debris flows indicate that abundances were very low, suggesting that persistence may be uncertain unless there is successful reproduction or immigration. Finally, eDNA appears to be effective for monitoring sensitive fish populations after a major disturbance; however, detection rates in individual samples may be low and require appropriate sampling designs to achieve the desired detection probability.</p></div>","language":"English","publisher":"American Fisheries Society","doi":"10.1002/nafm.11032","usgsCitation":"Rundio, D.E., Spence, B.C., Chase, D.M., and Ostberg, C.O., 2024, Using environmental DNA to assess the response of steelhead/Rainbow Trout and Coastrange Sculpin populations to postfire debris flows in coastal streams of Big Sur, California: North American Journal of Fisheries Management, v. 44, no. 6, p. 1167-1182, https://doi.org/10.1002/nafm.11032.","productDescription":"16 p.","startPage":"1167","endPage":"1182","ipdsId":"IP-164131","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":486316,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P14QTBGH","text":"USGS data release","linkHelpText":"Environmental DNA survey results for Oncorhynchus mykiss and Cottus aleuticus in coastal streams of Big Sur, California, 2021-2022"},{"id":466907,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/nafm.11032","text":"Publisher Index Page"},{"id":462783,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","otherGeospatial":"Big Sur","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -121.9432437440901,\n              36.41227440287848\n            ],\n            [\n              -121.9432437440901,\n              35.99450828633897\n            ],\n            [\n              -121.2493968215615,\n              35.99450828633897\n            ],\n            [\n              -121.2493968215615,\n              36.41227440287848\n            ],\n            [\n              -121.9432437440901,\n              36.41227440287848\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"44","issue":"6","noUsgsAuthors":false,"publicationDate":"2024-09-22","publicationStatus":"PW","contributors":{"authors":[{"text":"Rundio, David E. 0000-0002-9881-2626","orcid":"https://orcid.org/0000-0002-9881-2626","contributorId":340083,"corporation":false,"usgs":false,"family":"Rundio","given":"David","email":"","middleInitial":"E.","affiliations":[{"id":81449,"text":"Fisheries Ecology Division, Southwest Fisheries Science Center National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, CA","active":true,"usgs":false}],"preferred":false,"id":915578,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Spence, Brian C. 0000-0002-9613-0795","orcid":"https://orcid.org/0000-0002-9613-0795","contributorId":340082,"corporation":false,"usgs":false,"family":"Spence","given":"Brian","email":"","middleInitial":"C.","affiliations":[{"id":81449,"text":"Fisheries Ecology Division, Southwest Fisheries Science Center National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, CA","active":true,"usgs":false}],"preferred":false,"id":915579,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Chase, Dorothy M. 0000-0002-7759-2687","orcid":"https://orcid.org/0000-0002-7759-2687","contributorId":203926,"corporation":false,"usgs":true,"family":"Chase","given":"Dorothy","email":"","middleInitial":"M.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":915580,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Ostberg, Carl O. 0000-0003-1479-8458","orcid":"https://orcid.org/0000-0003-1479-8458","contributorId":220731,"corporation":false,"usgs":true,"family":"Ostberg","given":"Carl","middleInitial":"O.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":915581,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70258711,"text":"70258711 - 2024 - Likely ferromagnetic minerals identified by the Perseverance rover and implications for future paleomagnetic analyses of returned Martian samples","interactions":[],"lastModifiedDate":"2024-09-24T11:54:08.307401","indexId":"70258711","displayToPublicDate":"2024-09-22T06:52:51","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5718,"text":"Journal of Geophysical Research: Planets","onlineIssn":"2169-9100","active":true,"publicationSubtype":{"id":10}},"title":"Likely ferromagnetic minerals identified by the Perseverance rover and implications for future paleomagnetic analyses of returned Martian samples","docAbstract":"<div class=\"article-section__content en main\"><p>Although Mars today does not have a core dynamo, magnetizations in the Martian crust and in meteorites suggest a magnetic field was present prior to 3.7 billion years (Ga) ago. However, the lack of ancient, oriented Martian bedrock samples available on Earth has prevented accurate estimates of the dynamo's intensity, lifetime, and direction. Constraining the nature and lifetime of the dynamo are vital to understanding the evolution of the Martian interior and the potential habitability of the planet. The Perseverance rover, which is exploring Jezero crater, is providing an unprecedented opportunity to address this gap by acquiring absolutely oriented bedrock samples with estimated ages from ∼2.3 to &gt;4.1&nbsp;Ga. As a first step in establishing whether these samples could contain records of Martian paleomagnetism, it is important to determine their ferromagnetic mineralogy, the grain sizes of the phases, and the forms of any natural remanent magnetization. Here, we synthesize data from various Perseverance instruments to achieve those goals and discuss the implications for future laboratory paleomagnetic analyses. Using the rover's instrument payload, we find that cored samples likely contain iron oxides enriched in Cr and Ti. The relative proportions of Fe, Ti, and Cr indicate that the phases may be titanomagnetite or Fe-Ti-Cr spinels that are ferromagnetic at room temperature, but we cannot rule out the presence of non-ferromagnetic ulvöspinel, ilmenite, and chromite due to signal mixing. Importantly, the inferred abundance of iron oxides in the samples suggests that even &lt;1&nbsp;mm-sized samples will be easily measurable by present-day magnetometers.</p></div>","language":"English","publisher":"Wiley","doi":"10.1029/2024JE008505","usgsCitation":"Mansbach, M., Kizovski, T., Scheller, E.L., Bosak, T., Mandon, L., Horgan, B., Wiens, R., Herd, C., Sharma, S., Johnson, J., Gabriel, T.S., Forni, O., and Weiss, B., 2024, Likely ferromagnetic minerals identified by the Perseverance rover and implications for future paleomagnetic analyses of returned Martian samples: Journal of Geophysical Research: Planets, v. 129, no. 9, e2024JE008505, 29 p., https://doi.org/10.1029/2024JE008505.","productDescription":"e2024JE008505, 29 p.","ipdsId":"IP-159030","costCenters":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"links":[{"id":466908,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2024je008505","text":"Publisher Index Page"},{"id":462174,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"129","issue":"9","noUsgsAuthors":false,"publicationDate":"2024-09-22","publicationStatus":"PW","contributors":{"authors":[{"text":"Mansbach, M.N.","contributorId":344461,"corporation":false,"usgs":false,"family":"Mansbach","given":"M.N.","email":"","affiliations":[{"id":82347,"text":"Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA","active":true,"usgs":false}],"preferred":false,"id":913773,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kizovski, T.V.","contributorId":296810,"corporation":false,"usgs":false,"family":"Kizovski","given":"T.V.","email":"","affiliations":[{"id":64190,"text":"Department of Earth Sciences, Brock University, St Catherines","active":true,"usgs":false}],"preferred":false,"id":913774,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Scheller, E. L.","contributorId":344462,"corporation":false,"usgs":false,"family":"Scheller","given":"E.","email":"","middleInitial":"L.","affiliations":[{"id":82347,"text":"Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA","active":true,"usgs":false}],"preferred":false,"id":913775,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Bosak, T.","contributorId":290063,"corporation":false,"usgs":false,"family":"Bosak","given":"T.","email":"","affiliations":[{"id":62325,"text":"MIT, Department of Earth, Atmospheric, and Planetary Sciences","active":true,"usgs":false}],"preferred":false,"id":913776,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Mandon, L.","contributorId":290096,"corporation":false,"usgs":false,"family":"Mandon","given":"L.","affiliations":[{"id":62337,"text":"LESIA, Observatoire de Paris, Université PSL, Sorbonne Université, Université de Paris","active":true,"usgs":false}],"preferred":false,"id":913777,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Horgan, B.","contributorId":241733,"corporation":false,"usgs":false,"family":"Horgan","given":"B.","email":"","affiliations":[{"id":13186,"text":"Purdue University","active":true,"usgs":false}],"preferred":false,"id":913778,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Wiens, R.C.","contributorId":344463,"corporation":false,"usgs":false,"family":"Wiens","given":"R.C.","email":"","affiliations":[{"id":82350,"text":"Department of Earth, Atmospheric, and Planetary Sciences, Purdue University, West Lafayette, IN, USA","active":true,"usgs":false}],"preferred":false,"id":913779,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Herd, C.D.K.","contributorId":296824,"corporation":false,"usgs":false,"family":"Herd","given":"C.D.K.","affiliations":[{"id":64199,"text":"Department of Earth and Atmospheric Sciences, University of Alberta","active":true,"usgs":false}],"preferred":false,"id":913780,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Sharma, S.","contributorId":290122,"corporation":false,"usgs":false,"family":"Sharma","given":"S.","email":"","affiliations":[],"preferred":false,"id":913781,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Johnson, J.R.","contributorId":296826,"corporation":false,"usgs":false,"family":"Johnson","given":"J.R.","email":"","affiliations":[{"id":7166,"text":"Johns Hopkins University Applied Physics Laboratory","active":true,"usgs":false}],"preferred":false,"id":913782,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Gabriel, Travis S.J. 0000-0002-9767-4153","orcid":"https://orcid.org/0000-0002-9767-4153","contributorId":267903,"corporation":false,"usgs":true,"family":"Gabriel","given":"Travis","middleInitial":"S.J.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":913783,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Forni, O.","contributorId":290037,"corporation":false,"usgs":false,"family":"Forni","given":"O.","affiliations":[{"id":62314,"text":"Institut de Recherche en Astrophysique et Planétologie, Université de Toulouse","active":true,"usgs":false}],"preferred":false,"id":913784,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Weiss, B.P.","contributorId":344464,"corporation":false,"usgs":false,"family":"Weiss","given":"B.P.","email":"","affiliations":[{"id":82347,"text":"Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA, USA","active":true,"usgs":false}],"preferred":false,"id":913785,"contributorType":{"id":1,"text":"Authors"},"rank":13}]}}
,{"id":70258685,"text":"70258685 - 2024 - Physics-based forecasts of eruptive vent locations at calderas","interactions":[],"lastModifiedDate":"2024-09-24T11:56:35.158687","indexId":"70258685","displayToPublicDate":"2024-09-21T06:55:48","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":7167,"text":"Journal of Geophysical Research: Solid Earth","active":true,"publicationSubtype":{"id":10}},"title":"Physics-based forecasts of eruptive vent locations at calderas","docAbstract":"<div class=\"article-section__content en main\"><p>Constraining stresses in the Earth's crust in volcanic regions is critical for understanding many mechanical processes related to eruptive activity. Dike pathways, in particular, are shaped by the orientation of principal stress axes. Therefore, accurate models of dike trajectories and future vent locations rely on accurate estimates of stresses in the subsurface. This work presents a framework for probabilistic constraint of the stress state of calderas by combining three-dimensional physics-based dike pathway models with observed past vent locations using a Monte Carlo approach. The retrieved stress state is then used to produce probability maps of future vent opening across a caldera. We test our stress inversion and vent forecast approach on synthetic scenarios, and find it successful depending on the distribution of the available vents and the complexity of the volcano's structural history. We explore the potential and limitations of the approach, show how its performance is sensitive to the assumptions in the models and available prior information, and discuss how it may be applied to real calderas.</p></div>","language":"English","publisher":"Wiley","doi":"10.1029/2023JB028409","usgsCitation":"Mantiloni, L., Rivalta, E., Anderson, K.R., Davis, T.W., and Passarelli, L., 2024, Physics-based forecasts of eruptive vent locations at calderas: Journal of Geophysical Research: Solid Earth, v. 129, no. 9, e2023JB028409, 20 p., https://doi.org/10.1029/2023JB028409.","productDescription":"e2023JB028409, 20 p.","ipdsId":"IP-159349","costCenters":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":466909,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2023jb028409","text":"Publisher Index Page"},{"id":462175,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"129","issue":"9","noUsgsAuthors":false,"publicationDate":"2024-09-21","publicationStatus":"PW","contributors":{"authors":[{"text":"Mantiloni, Lorenzo","contributorId":344370,"corporation":false,"usgs":false,"family":"Mantiloni","given":"Lorenzo","email":"","affiliations":[{"id":82335,"text":"GFZ German Research Centre for Geosciences / University of Potsdam","active":true,"usgs":false}],"preferred":false,"id":913671,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rivalta, Eleanora","contributorId":344371,"corporation":false,"usgs":false,"family":"Rivalta","given":"Eleanora","email":"","affiliations":[{"id":82337,"text":"GFZ German Research Centre for Geosciences / University of Bologna","active":true,"usgs":false}],"preferred":false,"id":913672,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Anderson, Kyle R. 0000-0001-8041-3996 kranderson@usgs.gov","orcid":"https://orcid.org/0000-0001-8041-3996","contributorId":3522,"corporation":false,"usgs":true,"family":"Anderson","given":"Kyle","email":"kranderson@usgs.gov","middleInitial":"R.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":913673,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Davis, Timothy W.","contributorId":169289,"corporation":false,"usgs":false,"family":"Davis","given":"Timothy","email":"","middleInitial":"W.","affiliations":[{"id":6637,"text":"National Oceanic and Atmospheric Administration, Northwest Fisheries Science Center, 2725 Montlake Blvd E, Seattle, WA 98112","active":true,"usgs":false}],"preferred":false,"id":913674,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Passarelli, Luigi","contributorId":344372,"corporation":false,"usgs":false,"family":"Passarelli","given":"Luigi","email":"","affiliations":[{"id":39118,"text":"Istituto Nazionale di Geofisica e Vulcanologia","active":true,"usgs":false}],"preferred":false,"id":913675,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70259290,"text":"70259290 - 2024 - A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists","interactions":[],"lastModifiedDate":"2024-10-03T11:55:23.119534","indexId":"70259290","displayToPublicDate":"2024-09-21T06:49:36","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5840,"text":"Environmental DNA","active":true,"publicationSubtype":{"id":10}},"title":"A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists","docAbstract":"<div class=\"abstract-group  metis-abstract\"><div class=\"article-section__content en main\"><p>Ecologists, biologists, and conservation scientists are increasingly interested in the use of environmental DNA (eDNA) data for research and potentially decision-making. While commercial DNA extraction kits are typically user-friendly and accessible, they may fail to deliver the desired results with inherently complex eDNA samples, necessitating protocol optimization or educated selection of alternative approaches. To this end, knowledge of the basic steps and principles of DNA extractions is essential, but traditional education tracks in ecology, conservation, and environmental management typically do not include in-depth training in molecular methods. The primary objective of this paper is to enable scientists with an ecological background and limited molecular training to understand the four key steps of eDNA isolations, and to use this expertise to their advantage. We describe the purpose of commonly used reagents and chemicals, point out alternatives for each key step, explain the impact of certain choices regarding isolation approaches on DNA integrity and purity, and highlight the possibility of a tailor-made “mix and match” approach. We anticipate that this paper will enable field ecologists to develop a deeper understanding of the mechanisms and chemistry underlying eDNA extractions, thus allowing them to make informed decisions regarding the best eDNA extraction method for their research goals. Our intention is not to provide comprehensive, step-by-step protocols, but to offer guiding principles while highlighting alternative solutions. Finally, we hope that this paper will act as a useful resource to support knowledge transfer and teaching.</p></div></div>","language":"English","publisher":"Wiley","doi":"10.1002/edn3.70002","usgsCitation":"Rieder, J.M., Jemmi, E., Hunter, M., and Adrian-Kalchhauser, I., 2024, A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists: Environmental DNA, v. 6, no. 5, e70002, 16 p., https://doi.org/10.1002/edn3.70002.","productDescription":"e70002, 16 p.","ipdsId":"IP-164094","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":466910,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/edn3.70002","text":"Publisher Index Page"},{"id":462524,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"6","issue":"5","noUsgsAuthors":false,"publicationDate":"2024-09-21","publicationStatus":"PW","contributors":{"authors":[{"text":"Rieder, Jessica Marie 0000-0001-8922-9925","orcid":"https://orcid.org/0000-0001-8922-9925","contributorId":344819,"corporation":false,"usgs":true,"family":"Rieder","given":"Jessica","email":"","middleInitial":"Marie","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":914799,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jemmi, Eliane","contributorId":344821,"corporation":false,"usgs":false,"family":"Jemmi","given":"Eliane","email":"","affiliations":[{"id":82416,"text":"Institute for Fish and Wildlife Health, Department of Infectious Diseases and Pathobiology, Vetsuisse Faculty, University of Bern, Switzerland","active":true,"usgs":false}],"preferred":false,"id":914800,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hunter, Margaret 0000-0002-4760-9302","orcid":"https://orcid.org/0000-0002-4760-9302","contributorId":207584,"corporation":false,"usgs":true,"family":"Hunter","given":"Margaret","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":914801,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Adrian-Kalchhauser, Irene","contributorId":344822,"corporation":false,"usgs":false,"family":"Adrian-Kalchhauser","given":"Irene","email":"","affiliations":[{"id":82416,"text":"Institute for Fish and Wildlife Health, Department of Infectious Diseases and Pathobiology, Vetsuisse Faculty, University of Bern, Switzerland","active":true,"usgs":false}],"preferred":false,"id":914802,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
]}