{"pageNumber":"1856","pageRowStart":"46375","pageSize":"25","recordCount":184606,"records":[{"id":70007374,"text":"sim3109 - 2010 - Surficial geologic map of the Amboy 30' x 60' quadrangle, San Bernardino County, California","interactions":[],"lastModifiedDate":"2022-04-15T19:28:26.983869","indexId":"sim3109","displayToPublicDate":"2012-02-23T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":333,"text":"Scientific Investigations Map","code":"SIM","onlineIssn":"2329-132X","printIssn":"2329-1311","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"3109","title":"Surficial geologic map of the Amboy 30' x 60' quadrangle, San Bernardino County, California","docAbstract":"The surficial geologic map of the Amboy 30' x 60' quadrangle presents characteristics of surficial materials for an area of approximately 5,000 km<sup>2</sup> in the eastern Mojave Desert of southern California. This map consists of new surficial mapping conducted between 2000 and 2007, as well as compilations from previous surficial mapping. Surficial geologic units are mapped and described based on depositional process and age categories that reflect the mode of deposition, pedogenic effects following deposition, and, where appropriate, the lithologic nature of the material. Many physical properties were noted and measured during the geologic mapping. This information was used to classify surficial deposits and to understand their ecological importance. We focus on physical properties that drive hydrologic, biologic, and physical processes such as particle-size distribution (PSD) and bulk density. The database contains point data representing locations of samples for both laboratory determined physical properties and semiquantitative field-based information in the database. We include the locations of all field observations and note the type of information collected in the field to help assist in assessing the quality of the mapping. The publication is separated into three parts: documentation, spatial data, and printable map graphics of the database. Documentation includes this pamphlet, which provides a discussion of the surficial geology and units and the map. Spatial data are distributed as ArcGIS Geodatabase in Microsoft Access format and are accompanied by a readme file, which describes the database contents, and FGDC metadata for the spatial map information. Map graphics files are distributed as Postscript and Adobe Portable Document Format (PDF) files that provide a view of the spatial database at the mapped scale.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sim3109","usgsCitation":"Bedford, D., Miller, D., and Phelps, G., 2010, Surficial geologic map of the Amboy 30' x 60' quadrangle, San Bernardino County, California: U.S. Geological Survey Scientific Investigations Map 3109, Pamphlet: iv, 20 p.; 1 Plate: 56.00 x 30.00 inches; Readme; Metadata; Data Download, https://doi.org/10.3133/sim3109.","productDescription":"Pamphlet: iv, 20 p.; 1 Plate: 56.00 x 30.00 inches; Readme; Metadata; Data Download","onlineOnly":"Y","additionalOnlineFiles":"Y","costCenters":[{"id":309,"text":"Geology and Geophysics Science Center","active":true,"usgs":true}],"links":[{"id":116397,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sim_3109.png"},{"id":398861,"rank":3,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_93795.htm"},{"id":115885,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sim/3109/","linkFileType":{"id":5,"text":"html"}}],"scale":"100000","projection":"Universal Transverse Mercator projection","datum":"NAD27","country":"United States","state":"California","county":"San Bernadino County","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -116,34.5 ], [ -116,35 ], [ -115,35 ], [ -115,34.5 ], [ -116,34.5 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505ba1dce4b08c986b31f362","contributors":{"authors":[{"text":"Bedford, David R.","contributorId":26352,"corporation":false,"usgs":true,"family":"Bedford","given":"David R.","affiliations":[],"preferred":false,"id":356339,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Miller, David M. 0000-0003-3711-0441 dmiller@usgs.gov","orcid":"https://orcid.org/0000-0003-3711-0441","contributorId":1707,"corporation":false,"usgs":true,"family":"Miller","given":"David M.","email":"dmiller@usgs.gov","affiliations":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":false,"id":356337,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Phelps, Geoffrey A.","contributorId":17262,"corporation":false,"usgs":true,"family":"Phelps","given":"Geoffrey A.","affiliations":[],"preferred":false,"id":356338,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70007515,"text":"70007515 - 2010 - An approach for modeling sediment budgets in supply-limited rivers","interactions":[],"lastModifiedDate":"2018-03-21T15:46:48","indexId":"70007515","displayToPublicDate":"2012-02-19T18:54:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3722,"text":"Water Resources Research","onlineIssn":"1944-7973","printIssn":"0043-1397","active":true,"publicationSubtype":{"id":10}},"title":"An approach for modeling sediment budgets in supply-limited rivers","docAbstract":"Reliable predictions of sediment transport and river morphology in response to variations in natural and human-induced drivers are necessary for river engineering and management. Because engineering and management applications may span a wide range of space and time scales, a broad spectrum of modeling approaches has been developed, ranging from suspended-sediment \"rating curves\" to complex three-dimensional morphodynamic models. Suspended sediment rating curves are an attractive approach for evaluating changes in multi-year sediment budgets resulting from changes in flow regimes because they are simple to implement, computationally efficient, and the empirical parameters can be estimated from quantities that are commonly measured in the field (i.e., suspended sediment concentration and water discharge). However, the standard rating curve approach assumes a unique suspended sediment concentration for a given water discharge. This assumption is not valid in rivers where sediment supply varies enough to cause changes in particle size or changes in areal coverage of sediment on the bed; both of these changes cause variations in suspended sediment concentration for a given water discharge. More complex numerical models of hydraulics and morphodynamics have been developed to address such physical changes of the bed. This additional complexity comes at a cost in terms of computations as well as the type and amount of data required for model setup, calibration, and testing. Moreover, application of the resulting sediment-transport models may require observations of bed-sediment boundary conditions that require extensive (and expensive) observations or, alternatively, require the use of an additional model (subject to its own errors) merely to predict the bed-sediment boundary conditions for use by the transport model. In this paper we present a hybrid approach that combines aspects of the rating curve method and the more complex morphodynamic models. Our primary objective was to develop an approach complex enough to capture the processes related to sediment supply limitation but simple enough to allow for rapid calculations of multi-year sediment budgets. The approach relies on empirical relations between suspended sediment concentration and discharge but on a particle size specific basis and also tracks and incorporates the particle size distribution of the bed sediment. We have applied this approach to the Colorado River below Glen Canyon Dam (GCD), a reach that is particularly suited to such an approach because it is substantially sediment supply limited such that transport rates are strongly dependent on both water discharge and sediment supply. The results confirm the ability of the approach to simulate the effects of supply limitation, including periods of accumulation and bed fining as well as erosion and bed coarsening, using a very simple formulation. Although more empirical in nature than standard one-dimensional morphodynamic models, this alternative approach is attractive because its simplicity allows for rapid evaluation of multi-year sediment budgets under a range of flow regimes and sediment supply conditions, and also because it requires substantially less data for model setup and use.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Water Resources Research","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"American Geophysical Union","publisherLocation":"Washington, D.C.","doi":"10.1029/2009WR008600","usgsCitation":"Wright, S., Topping, D.J., Rubin, D.M., and Melis, T., 2010, An approach for modeling sediment budgets in supply-limited rivers: Water Resources Research, v. 46, no. W10538, 18 p., https://doi.org/10.1029/2009WR008600.","productDescription":"18 p.","numberOfPages":"18","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true},{"id":322,"text":"Grand Canyon Monitoring and Research Center","active":false,"usgs":true},{"id":528,"text":"Pacific Science Center","active":false,"usgs":true}],"links":[{"id":475496,"rank":101,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2009wr008600","text":"Publisher Index Page"},{"id":204732,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":204718,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1029/2009WR008600","linkFileType":{"id":5,"text":"html"}}],"volume":"46","issue":"W10538","noUsgsAuthors":false,"publicationDate":"2010-10-28","publicationStatus":"PW","scienceBaseUri":"5059ea0be4b0c8380cd485cc","contributors":{"authors":[{"text":"Wright, Scott 0000-0002-0387-5713 sawright@usgs.gov","orcid":"https://orcid.org/0000-0002-0387-5713","contributorId":1536,"corporation":false,"usgs":true,"family":"Wright","given":"Scott","email":"sawright@usgs.gov","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":356568,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Topping, David J. 0000-0002-2104-4577 dtopping@usgs.gov","orcid":"https://orcid.org/0000-0002-2104-4577","contributorId":715,"corporation":false,"usgs":true,"family":"Topping","given":"David","email":"dtopping@usgs.gov","middleInitial":"J.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":false,"id":356571,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rubin, David M. 0000-0003-1169-1452 drubin@usgs.gov","orcid":"https://orcid.org/0000-0003-1169-1452","contributorId":3159,"corporation":false,"usgs":true,"family":"Rubin","given":"David","email":"drubin@usgs.gov","middleInitial":"M.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":356570,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Melis, Theodore S. 0000-0003-0473-3968 tmelis@usgs.gov","orcid":"https://orcid.org/0000-0003-0473-3968","contributorId":1829,"corporation":false,"usgs":true,"family":"Melis","given":"Theodore S.","email":"tmelis@usgs.gov","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":356569,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70007513,"text":"70007513 - 2010 - Nitrate in groundwater of the United States, 1991-2003","interactions":[],"lastModifiedDate":"2015-04-06T08:37:08","indexId":"70007513","displayToPublicDate":"2012-02-19T17:50:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1565,"text":"Environmental Science & Technology","onlineIssn":"1520-5851","printIssn":"0013-936X","active":true,"publicationSubtype":{"id":10}},"title":"Nitrate in groundwater of the United States, 1991-2003","docAbstract":"<p>An assessment of nitrate concentrations in groundwater in the United States indicates that concentrations are highest in shallow, oxic groundwater beneath areas with high N inputs. During 1991-2003, 5101 wells were sampled in 51 study areas throughout the U.S. as part of the U.S. Geological Survey National Water-Quality Assessment (NAWQA) program. The well networks reflect the existing used resource represented by domestic wells in major aquifers (major aquifer studies), and recently recharged groundwater beneath dominant land-surface activities (land-use studies). Nitrate concentrations were highest in shallow groundwater beneath agricultural land use in areas with well-drained soils and oxic geochemical conditions. Nitrate concentrations were lowest in deep groundwater where groundwater is reduced, or where groundwater is older and hence concentrations reflect historically low N application rates. Classification and regression tree analysis was used to identify the relative importance of N inputs, biogeochemical processes, and physical aquifer properties in explaining nitrate concentrations in groundwater. Factors ranked by reduction in sum of squares indicate that dissolved iron concentrations explained most of the variation in groundwater nitrate concentration, followed by manganese, calcium, farm N fertilizer inputs, percent well-drained soils, and dissolved oxygen. Overall, nitrate concentrations in groundwater are most significantly affected by redox conditions, followed by nonpoint-source N inputs. Other water-quality indicators and physical variables had a secondary influence on nitrate concentrations.</p>","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Environmental Science and Technology","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"ACS Publications","publisherLocation":"Washington, D.C.","doi":"10.1021/es100546y","usgsCitation":"Burow, K.R., Nolan, B.T., Rupert, M.G., and Dubrovsky, N.M., 2010, Nitrate in groundwater of the United States, 1991-2003: Environmental Science & Technology, v. 44, no. 13, p. 4988-4997, https://doi.org/10.1021/es100546y.","productDescription":"10 p.","startPage":"4988","endPage":"4997","numberOfPages":"10","onlineOnly":"N","additionalOnlineFiles":"N","temporalStart":"1991-01-01","temporalEnd":"2003-12-31","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":204734,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","volume":"44","issue":"13","noUsgsAuthors":false,"publicationDate":"2010-06-11","publicationStatus":"PW","scienceBaseUri":"505a66a9e4b0c8380cd72ee3","contributors":{"authors":[{"text":"Burow, Karen R. 0000-0001-6006-6667 krburow@usgs.gov","orcid":"https://orcid.org/0000-0001-6006-6667","contributorId":1504,"corporation":false,"usgs":true,"family":"Burow","given":"Karen","email":"krburow@usgs.gov","middleInitial":"R.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":356555,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Nolan, Bernard T. 0000-0002-6945-9659 btnolan@usgs.gov","orcid":"https://orcid.org/0000-0002-6945-9659","contributorId":2190,"corporation":false,"usgs":true,"family":"Nolan","given":"Bernard","email":"btnolan@usgs.gov","middleInitial":"T.","affiliations":[{"id":451,"text":"National Water Quality Assessment Program","active":true,"usgs":true},{"id":27111,"text":"National Water Quality Program","active":true,"usgs":true}],"preferred":true,"id":356557,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rupert, Michael G. mgrupert@usgs.gov","contributorId":1194,"corporation":false,"usgs":true,"family":"Rupert","given":"Michael","email":"mgrupert@usgs.gov","middleInitial":"G.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":356554,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Dubrovsky, Neil M. 0000-0001-7786-1149 nmdubrov@usgs.gov","orcid":"https://orcid.org/0000-0001-7786-1149","contributorId":1799,"corporation":false,"usgs":true,"family":"Dubrovsky","given":"Neil","email":"nmdubrov@usgs.gov","middleInitial":"M.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":356556,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70007518,"text":"70007518 - 2010 - Tapping environmental history to recreate America's colonial hydrology","interactions":[],"lastModifiedDate":"2012-03-08T17:16:42","indexId":"70007518","displayToPublicDate":"2012-02-19T15:42:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1565,"text":"Environmental Science & Technology","onlineIssn":"1520-5851","printIssn":"0013-936X","active":true,"publicationSubtype":{"id":10}},"title":"Tapping environmental history to recreate America's colonial hydrology","docAbstract":"<p>Throughout American history water resources have played integral roles in shaping patterns of human settlement and networks of biological and economic exchange. In turn, humans have altered hydrologic systems to meet their needs. A paucity of climate and water discharge data for the seventeenth and eighteenth centuries, however, has left America's preindustrial hydrology largely unstudied. As a result, there have been few detailed, quantifiable, regional assessments of hydrologic change between the time of first European settlement and the dawn of industrial expansion.</p>\n<p>As scientists labor to understand present-day hydrologic systems and make predictions about the future, the value of expanding the geographic (1, 2) and temporal scopes (3, 4) of their studies has become increasingly evident. Pollen and tree-ring analyses have helped shed light on past climate and land-use patterns. But other nonscientific sources and methods can be equally revealing and in some cases complement empirical studies (5). This paper argues that environmental science, particularly that concerned with the human dimensions of water resources, stands to profit from using historical literature and archival sources. By considering work in environmental history, forging closer working relationships between the geophysical and social sciences, and seriously entertaining narratives as a form of evidence, environmental scientists can not only look farther into the past and across broader geographic areas, but they can also more accurately describe the nuances and complexities that define the ways humans have changed the world around them. In this paper, we present the recommendations of a multidisciplinary summer institute that developed 1) a conceptual and methodological framework for conducting historical hydrology, and 2) suggestions for ways that historical information can be used to inform the hydrologic sciences. Our intent here is to encourage further work along these or similar lines. We believe that future efforts that build on our famework and draw and expand upon the sources referenced below will produce scholarship of great utility to both environmental and social sciences.</p>","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Environmental Science and Technology","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"ACS Publications","publisherLocation":"Washington, D.C.","doi":"10.1021/es102672c","usgsCitation":"Pastore, C.L., Green, M., Bain, D., Munoz-Hernandez, A., Vorosmarty, C.J., Arrigo, J., Brandt, S., Duncan, J., Greco, F., Kim, H., Kumar, S., Lally, M., Parolari, A.J., Pellerin, B.A., Salant, N., Schlosser, A., and Zalzal, K., 2010, Tapping environmental history to recreate America's colonial hydrology: Environmental Science & Technology, v. 44, no. 23, p. 8798-8803, https://doi.org/10.1021/es102672c.","productDescription":"6 p.","startPage":"8798","endPage":"8803","numberOfPages":"7","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":493327,"rank":101,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://epublications.marquette.edu/civengin_fac/180","text":"External Repository"},{"id":204730,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":204711,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1021/es102672c","linkFileType":{"id":5,"text":"html"}}],"country":"United States","volume":"44","issue":"23","noUsgsAuthors":false,"publicationDate":"2010-11-03","publicationStatus":"PW","scienceBaseUri":"505ba3e0e4b08c986b31ff4f","contributors":{"authors":[{"text":"Pastore, Christopher L.","contributorId":98182,"corporation":false,"usgs":true,"family":"Pastore","given":"Christopher","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":356592,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Green, Mark B.","contributorId":86231,"corporation":false,"usgs":true,"family":"Green","given":"Mark B.","affiliations":[],"preferred":false,"id":356590,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bain, Daniel J.","contributorId":29276,"corporation":false,"usgs":true,"family":"Bain","given":"Daniel J.","affiliations":[],"preferred":false,"id":356580,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Munoz-Hernandez, Andrea","contributorId":12332,"corporation":false,"usgs":true,"family":"Munoz-Hernandez","given":"Andrea","email":"","affiliations":[],"preferred":false,"id":356578,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Vorosmarty, Charles J.","contributorId":77004,"corporation":false,"usgs":true,"family":"Vorosmarty","given":"Charles","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":356588,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Arrigo, Jennifer","contributorId":92528,"corporation":false,"usgs":true,"family":"Arrigo","given":"Jennifer","affiliations":[],"preferred":false,"id":356591,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Brandt, Sara","contributorId":23023,"corporation":false,"usgs":true,"family":"Brandt","given":"Sara","affiliations":[],"preferred":false,"id":356579,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Duncan, Jonathan M.","contributorId":105977,"corporation":false,"usgs":true,"family":"Duncan","given":"Jonathan M.","affiliations":[],"preferred":false,"id":356593,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Greco, Francesca","contributorId":73070,"corporation":false,"usgs":true,"family":"Greco","given":"Francesca","email":"","affiliations":[],"preferred":false,"id":356587,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Kim, Hyojin","contributorId":36019,"corporation":false,"usgs":true,"family":"Kim","given":"Hyojin","email":"","affiliations":[],"preferred":false,"id":356582,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Kumar, Sanjiv","contributorId":48448,"corporation":false,"usgs":true,"family":"Kumar","given":"Sanjiv","email":"","affiliations":[],"preferred":false,"id":356584,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Lally, Michael","contributorId":50790,"corporation":false,"usgs":true,"family":"Lally","given":"Michael","email":"","affiliations":[],"preferred":false,"id":356585,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Parolari, Anthony J.","contributorId":77425,"corporation":false,"usgs":true,"family":"Parolari","given":"Anthony","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":356589,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Pellerin, Brian A. bpeller@usgs.gov","contributorId":1451,"corporation":false,"usgs":true,"family":"Pellerin","given":"Brian","email":"bpeller@usgs.gov","middleInitial":"A.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":false,"id":356577,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Salant, Nira","contributorId":35197,"corporation":false,"usgs":true,"family":"Salant","given":"Nira","email":"","affiliations":[],"preferred":false,"id":356581,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Schlosser, Adam","contributorId":36426,"corporation":false,"usgs":true,"family":"Schlosser","given":"Adam","email":"","affiliations":[],"preferred":false,"id":356583,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Zalzal, Kate","contributorId":71447,"corporation":false,"usgs":true,"family":"Zalzal","given":"Kate","email":"","affiliations":[],"preferred":false,"id":356586,"contributorType":{"id":1,"text":"Authors"},"rank":17}]}}
,{"id":70003587,"text":"70003587 - 2010 - Words matter: Recommendations for clarifying coral disease nomenclature and terminology","interactions":[],"lastModifiedDate":"2012-02-22T00:10:03","indexId":"70003587","displayToPublicDate":"2012-02-12T17:50:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1396,"text":"Diseases of Aquatic Organisms","active":true,"publicationSubtype":{"id":10}},"title":"Words matter: Recommendations for clarifying coral disease nomenclature and terminology","docAbstract":"Coral diseases have caused significant losses on Caribbean reefs and are becoming a greater concern in the Pacific. Progress in coral disease research requires collaboration and communication among experts from many different disciplines. The lack of consistency in the use of terms and names in the recent scientific literature reflects the absence of an authority for naming coral diseases, a lack of consensus on the meaning of even some of the most basic terms as they apply to corals, and imprecision in the use of descriptive words. The lack of consensus partly reflects the complexity of this newly emerging field of research. Establishment of a nomenclature committee under the Coral Disease and Health Consortium (CDHC) could lead to more standardized definitions and could promote use of appropriate medical terminology for describing and communicating disease conditions in corals. This committee could also help to define disease terminology unique to corals where existing medical terminology is not applicable. These efforts will help scientists communicate with one another and with the general public more effectively. Scientists can immediately begin to reduce some of the confusion simply by explicitly defining the words they are using. In addition, digital photographs can be posted on the CDHC website and included in publications to document the macroscopic (gross) signs of the conditions observed on coral colonies along with precisely written characterizations and descriptions.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Diseases of Aquatic Organisms","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Inter-Research Science Center","publisherLocation":"Oldendorf/Luhe, Germany","usgsCitation":"Rogers, C.S., 2010, Words matter: Recommendations for clarifying coral disease nomenclature and terminology: Diseases of Aquatic Organisms, v. 91, no. 2, p. 167-175.","productDescription":"9 p.","startPage":"167","endPage":"175","costCenters":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":115834,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://www.ncbi.nlm.nih.gov/pubmed/21387996","linkFileType":{"id":5,"text":"html"}},{"id":204563,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"91","issue":"2","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bd1b3e4b08c986b32f561","contributors":{"authors":[{"text":"Rogers, Caroline S. 0000-0001-9056-6961 caroline_rogers@usgs.gov","orcid":"https://orcid.org/0000-0001-9056-6961","contributorId":3126,"corporation":false,"usgs":true,"family":"Rogers","given":"Caroline","email":"caroline_rogers@usgs.gov","middleInitial":"S.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":347845,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70003514,"text":"70003514 - 2010 - Winter distribution, movements, and annual survival of radiomarked Vancouver Canada geese in southeast Alaska","interactions":[],"lastModifiedDate":"2018-06-20T20:26:17","indexId":"70003514","displayToPublicDate":"2012-02-12T17:15:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2508,"text":"Journal of Wildlife Management","active":true,"publicationSubtype":{"id":10}},"title":"Winter distribution, movements, and annual survival of radiomarked Vancouver Canada geese in southeast Alaska","docAbstract":"Management of Pacific Flyway Canada geese (<i>Branta canadensis</i>) requires information on winter distribution of different populations. Recoveries of tarsus bands from Vancouver Canada geese (<i>B. canadensis fulva</i>) marked in southeast Alaska, USA, &ge;4 decades ago suggested that &ge;83% of the population was non-migratory and that annual adult survival was high (&#348; = 0.836). However, recovery distribution of tarsus bands was potentially biased due to geographic differences in harvest intensity in the Pacific Flyway. Also, winter distribution of Vancouver Canada geese could have shifted since the 1960s, as has occurred for some other populations of Canada geese. Because winter distribution and annual survival of this population had not recently been evaluated, we surgically implanted very high frequency radiotransmitters in 166 adult female Canada geese in southeast Alaska. We captured Vancouver Canada geese during molt at 2 sites where adults with goslings were present (breeding areas) and 2 sites where we observed nonbreeding birds only. During winter radiotracking flights in southeast Alaska, we detected 98% of 85 females marked at breeding areas and 83% of 70 females marked at nonbreeding sites, excluding 11 females that died prior to the onset of winter radiotracking. We detected no radiomarked females in coastal British Columbia, or western Washington and Oregon, USA. Most (70%) females moved &le;30 km between November and March. Our model-averaged estimate of annual survival (&#348; = 0.844, SE = 0.050) was similar to the estimate of annual survival of geese marked from 1956 to 1960. Likely <2% of Vancouver Canada geese that nest in southeast Alaska migrate to winter areas in Oregon or Washington where they could intermix with Canada geese from other populations in the Pacific Flyway. Because annual survival of adult Vancouver Canada geese was high and showed evidence of long-term consistency, managers should examine how reproductive success and recruitment may affect the population.","language":"English","publisher":"The Wildlife Society","doi":"10.2193/2009-057","usgsCitation":"Hupp, J.W., Hodges, J.I., Conant, B.P., Meixell, B.W., and Groves, D.J., 2010, Winter distribution, movements, and annual survival of radiomarked Vancouver Canada geese in southeast Alaska: Journal of Wildlife Management, v. 74, no. 2, p. 274-284, https://doi.org/10.2193/2009-057.","productDescription":"11 p.","startPage":"274","endPage":"284","costCenters":[{"id":115,"text":"Alaska Science Center Biology","active":false,"usgs":true}],"links":[{"id":204566,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","volume":"74","issue":"2","noUsgsAuthors":false,"publicationDate":"2010-12-13","publicationStatus":"PW","scienceBaseUri":"505bd147e4b08c986b32f32c","contributors":{"authors":[{"text":"Hupp, Jerry W. 0000-0002-6439-3910 jhupp@usgs.gov","orcid":"https://orcid.org/0000-0002-6439-3910","contributorId":127803,"corporation":false,"usgs":true,"family":"Hupp","given":"Jerry","email":"jhupp@usgs.gov","middleInitial":"W.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":347596,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hodges, John I. Jr.","contributorId":69015,"corporation":false,"usgs":true,"family":"Hodges","given":"John","suffix":"Jr.","email":"","middleInitial":"I.","affiliations":[],"preferred":false,"id":347600,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Conant, Bruce P.","contributorId":20215,"corporation":false,"usgs":true,"family":"Conant","given":"Bruce","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":347598,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Meixell, Brandt W. 0000-0002-6738-0349 bmeixell@usgs.gov","orcid":"https://orcid.org/0000-0002-6738-0349","contributorId":138716,"corporation":false,"usgs":true,"family":"Meixell","given":"Brandt","email":"bmeixell@usgs.gov","middleInitial":"W.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"preferred":true,"id":347597,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Groves, Debbie J.","contributorId":53239,"corporation":false,"usgs":true,"family":"Groves","given":"Debbie","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":347599,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70003533,"text":"70003533 - 2010 - Wing pathology of white-nose syndrome in bats suggests life-threatening disruption of physiology","interactions":[],"lastModifiedDate":"2023-10-23T15:07:32.630535","indexId":"70003533","displayToPublicDate":"2012-02-12T16:18:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":953,"text":"BMC Biology","active":true,"publicationSubtype":{"id":10}},"title":"Wing pathology of white-nose syndrome in bats suggests life-threatening disruption of physiology","docAbstract":"<p>White-nose syndrome (WNS) is causing unprecedented declines in several species of North American bats. The characteristic lesions of WNS are caused by the fungus <i>Geomyces destructans</i>, which erodes and replaces the living skin of bats while they hibernate. It is unknown how this infection kills the bats. We review here the unique physiological importance of wings to hibernating bats in relation to the damage caused by <i>G. destructans</i> and propose that mortality is caused by catastrophic disruption of wing-dependent physiological functions. Mechanisms of disease associated with <i>G. destructans</i> seem specific to hibernating bats and are most analogous to disease caused by chytrid fungus in amphibians.</p>","language":"English","publisher":"BioMed Central","publisherLocation":"London, UK","doi":"10.1186/1741-7007-8-135","usgsCitation":"Cryan, P., Meteyer, C.U., Boyles, J.G., and Blehert, D., 2010, Wing pathology of white-nose syndrome in bats suggests life-threatening disruption of physiology: BMC Biology, v. 8, no. 1, https://doi.org/10.1186/1741-7007-8-135.","productDescription":"8 p.","startPage":"135","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-022072","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":475498,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1186/1741-7007-8-135","text":"Publisher Index 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0000-0002-4007-3410 cmeteyer@usgs.gov","orcid":"https://orcid.org/0000-0002-4007-3410","contributorId":111,"corporation":false,"usgs":true,"family":"Meteyer","given":"Carol","email":"cmeteyer@usgs.gov","middleInitial":"U.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":false,"id":512691,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Boyles, Justin G.","contributorId":26810,"corporation":false,"usgs":true,"family":"Boyles","given":"Justin","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":512693,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Blehert, David S. 0000-0002-1065-9760 dblehert@usgs.gov","orcid":"https://orcid.org/0000-0002-1065-9760","contributorId":1816,"corporation":false,"usgs":true,"family":"Blehert","given":"David S.","email":"dblehert@usgs.gov","affiliations":[{"id":456,"text":"National Wildlife Health 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,{"id":70005800,"text":"70005800 - 2010 - Visible and infrared remote imaging of hazardous waste: A review","interactions":[],"lastModifiedDate":"2012-02-07T00:10:04","indexId":"70005800","displayToPublicDate":"2012-01-29T14:58:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3250,"text":"Remote Sensing","active":true,"publicationSubtype":{"id":10}},"title":"Visible and infrared remote imaging of hazardous waste: A review","docAbstract":"One of the critical global environmental problems is human and ecological exposure to hazardous wastes from agricultural, industrial, military and mining activities. These wastes often include heavy metals, hydrocarbons and other organic chemicals. Traditional field and laboratory detection and monitoring of these wastes are generally expensive and time consuming. The synoptic perspective of overhead remote imaging can be very useful for the detection and remediation of hazardous wastes. Aerial photography has a long and effective record in waste site evaluations. Aerial photographic archives allow temporal evaluation and change detection by visual interpretation. Multispectral aircraft and satellite systems have been successfully employed in both spectral and morphological analysis of hazardous wastes on the landscape and emerging hyperspectral sensors have permitted determination of the specific contaminants by processing strategies using the tens or hundreds of acquired wavelengths in the solar reflected and/or thermal infrared parts of the electromagnetic spectrum. This paper reviews the literature of remote sensing and overhead imaging in the context of hazardous waste and discusses future monitoring needs and emerging scientific research areas.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Remote Sensing","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"MDPI Publishing","publisherLocation":"Basel, Switzerland","doi":"10.3390/rs2112474","usgsCitation":"Slonecker, T., Fisher, G.B., Aiello, D., and Haack, B., 2010, Visible and infrared remote imaging of hazardous waste: A review: Remote Sensing, v. 2, no. 11, p. 2474-2508, https://doi.org/10.3390/rs2112474.","productDescription":"34 p.","startPage":"2474","endPage":"2508","numberOfPages":"34","costCenters":[{"id":242,"text":"Eastern Geographic Science Center","active":true,"usgs":true}],"links":[{"id":475500,"rank":101,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3390/rs2112474","text":"Publisher Index Page"},{"id":204570,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":115778,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.3390/rs2112474","linkFileType":{"id":5,"text":"html"}}],"volume":"2","issue":"11","noUsgsAuthors":false,"publicationDate":"2010-11-05","publicationStatus":"PW","scienceBaseUri":"505bc288e4b08c986b32abce","contributors":{"authors":[{"text":"Slonecker, Terrence","contributorId":13701,"corporation":false,"usgs":true,"family":"Slonecker","given":"Terrence","email":"","affiliations":[],"preferred":false,"id":353262,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fisher, Gary B. gfisher@usgs.gov","contributorId":3034,"corporation":false,"usgs":true,"family":"Fisher","given":"Gary","email":"gfisher@usgs.gov","middleInitial":"B.","affiliations":[],"preferred":true,"id":353261,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Aiello, Danielle P.","contributorId":107243,"corporation":false,"usgs":true,"family":"Aiello","given":"Danielle P.","affiliations":[],"preferred":false,"id":353264,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Haack, Barry","contributorId":66410,"corporation":false,"usgs":true,"family":"Haack","given":"Barry","affiliations":[],"preferred":false,"id":353263,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70005927,"text":"70005927 - 2010 - Vegetation index methods for estimating evapotranspiration by remote sensing","interactions":[],"lastModifiedDate":"2025-12-10T17:08:31.176037","indexId":"70005927","displayToPublicDate":"2012-01-29T12:26:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3503,"text":"Surveys in Geophysics","active":true,"publicationSubtype":{"id":10}},"title":"Vegetation index methods for estimating evapotranspiration by remote sensing","docAbstract":"Evapotranspiration (ET) is the largest term after precipitation in terrestrial water budgets. Accurate estimates of ET are needed for numerous agricultural and natural resource management tasks and to project changes in hydrological cycles due to potential climate change. We explore recent methods that combine vegetation indices (VI) from satellites with ground measurements of actual ET (ETa) and meteorological data to project ETa over a wide range of biome types and scales of measurement, from local to global estimates. The majority of these use time-series imagery from the Moderate Resolution Imaging Spectrometer on the Terra satellite to project ET over seasons and years. The review explores the theoretical basis for the methods, the types of ancillary data needed, and their accuracy and limitations. Coefficients of determination between modeled ETa and measured ETa are in the range of 0.45&ndash;0.95, and root mean square errors are in the range of 10&ndash;30% of mean ETa values across biomes, similar to methods that use thermal infrared bands to estimate ETa and within the range of accuracy of the ground measurements by which they are calibrated or validated. The advent of frequent-return satellites such as Terra and planed replacement platforms, and the increasing number of moisture and carbon flux tower sites over the globe, have made these methods feasible. Examples of operational algorithms for ET in agricultural and natural ecosystems are presented. The goal of the review is to enable potential end-users from different disciplines to adapt these methods to new applications that require spatially-distributed ET estimates.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Surveys in Geophysics","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Springer","publisherLocation":"Amsterdam, Netherlands","doi":"10.1007/s10712-010-9102-2","usgsCitation":"Glenn, E.P., Nagler, P.L., and Huete, A.R., 2010, Vegetation index methods for estimating evapotranspiration by remote sensing: Surveys in Geophysics, v. 31, no. 6, p. 531-555, https://doi.org/10.1007/s10712-010-9102-2.","productDescription":"25 p.","startPage":"531","endPage":"555","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":204693,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"31","issue":"6","noUsgsAuthors":false,"publicationDate":"2010-10-17","publicationStatus":"PW","scienceBaseUri":"505bc1d8e4b08c986b32a7b7","contributors":{"authors":[{"text":"Glenn, Edward P.","contributorId":19289,"corporation":false,"usgs":true,"family":"Glenn","given":"Edward","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":353479,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Nagler, Pamela L. 0000-0003-0674-103X pnagler@usgs.gov","orcid":"https://orcid.org/0000-0003-0674-103X","contributorId":1398,"corporation":false,"usgs":true,"family":"Nagler","given":"Pamela","email":"pnagler@usgs.gov","middleInitial":"L.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":353478,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Huete, Alfredo R.","contributorId":87291,"corporation":false,"usgs":true,"family":"Huete","given":"Alfredo","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":353480,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70003962,"text":"70003962 - 2010 - Variation in &delta;<sup>13</sup>C and &delta;<sup>15</sup>N diet&ndash;vibrissae trophic discrimination factors in a wild population of California sea otters","interactions":[],"lastModifiedDate":"2012-02-07T00:10:04","indexId":"70003962","displayToPublicDate":"2012-01-29T11:57:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1450,"text":"Ecological Applications","active":true,"publicationSubtype":{"id":10}},"title":"Variation in &delta;<sup>13</sup>C and &delta;<sup>15</sup>N diet&ndash;vibrissae trophic discrimination factors in a wild population of California sea otters","docAbstract":"The ability to quantify dietary inputs using stable isotope data depends on accurate estimates of isotopic differences between a consumer (c) and its diet (d), commonly referred to as trophic discrimination factors (TDFs) and denoted by &Delta;<sub>c-d</sub>. At present, TDFs are available for only a few mammals and are usually derived in captive settings. The magnitude of TDFs and the degree to which they vary in wild populations is unknown. We determined &delta;<sup>13</sup>C and &delta;<sup>15</sup>N TDFs for vibrissae (i.e., whiskers), a tissue that is rapidly becoming an informative isotopic substrate for ecologists, of a wild population of sea otters for which individual diet has been quantified through extensive observational study. This is one of the very few studies that report TDFs for free-living wild animals feeding on natural diets. Trophic discrimination factors of 2.2&#137; &plusmn; 0.7&#137; for &delta;<sup>13</sup>C and 3.5&#137; &plusmn; 0.6&#137; for &delta;<sup>15</sup>N (mean &plusmn; SD) were similar to those reported for captive carnivores, and variation in individual &delta;<sup>13</sup>C TDFs was negatively but significantly related to sea urchin consumption. This pattern may relate to the lipid-rich diet consumed by most sea otters in this population and suggests that it may not be appropriate to lipid-extract prey samples when using the isotopic composition of keratinaceous tissues to examine diet in consumers that frequently consume lipid-rich foods, such as many marine mammals and seabirds. We suggest that inherent variation in TDFs should be included in isotopically based estimates of trophic level, food chain length, and mixing models used to quantify dietary inputs in wild populations; this practice will further define the capabilities and limitations of isotopic approaches in ecological studies.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Ecological Applications","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Ecological Society of America","publisherLocation":"Ithaca, NY","doi":"10.1890/09-1502.1","usgsCitation":"Newsome, S.D., Bentall, G.B., Tinker, M.T., Oftedal, O.T., Ralls, K., Estes, J.A., and Fogel, M.L., 2010, Variation in &delta;<sup>13</sup>C and &delta;<sup>15</sup>N diet&ndash;vibrissae trophic discrimination factors in a wild population of California sea otters: Ecological Applications, v. 20, no. 6, p. 1744-1752, https://doi.org/10.1890/09-1502.1.","productDescription":"9 p.","startPage":"1744","endPage":"1752","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":21755,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1890/09-1502.1","linkFileType":{"id":5,"text":"html"}},{"id":204696,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"20","issue":"6","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bc14fe4b08c986b32a507","contributors":{"authors":[{"text":"Newsome, Seth D.","contributorId":81640,"corporation":false,"usgs":false,"family":"Newsome","given":"Seth","email":"","middleInitial":"D.","affiliations":[{"id":7000,"text":"Department of Biology, University of New Mexico","active":true,"usgs":false}],"preferred":false,"id":349733,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bentall, Gena B. 0000-0001-5448-1573","orcid":"https://orcid.org/0000-0001-5448-1573","contributorId":43103,"corporation":false,"usgs":true,"family":"Bentall","given":"Gena","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":349730,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Tinker, M. Tim 0000-0002-3314-839X ttinker@usgs.gov","orcid":"https://orcid.org/0000-0002-3314-839X","contributorId":2796,"corporation":false,"usgs":true,"family":"Tinker","given":"M.","email":"ttinker@usgs.gov","middleInitial":"Tim","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":349728,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Oftedal, Olav T.","contributorId":54738,"corporation":false,"usgs":true,"family":"Oftedal","given":"Olav","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":349732,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Ralls, Katherine","contributorId":37900,"corporation":false,"usgs":false,"family":"Ralls","given":"Katherine","email":"","affiliations":[{"id":7035,"text":"Smithsonian Conservation Biology Institute, National Zoological Park","active":true,"usgs":false}],"preferred":false,"id":349729,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Estes, James A. jim_estes@usgs.gov","contributorId":53325,"corporation":false,"usgs":true,"family":"Estes","given":"James","email":"jim_estes@usgs.gov","middleInitial":"A.","affiliations":[{"id":6949,"text":"University of California, Santa Cruz","active":true,"usgs":false},{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":false,"id":349731,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Fogel, Marilyn L.","contributorId":99699,"corporation":false,"usgs":true,"family":"Fogel","given":"Marilyn","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":349734,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70189919,"text":"70189919 - 2010 - Application of the control volume mixed finite element method to a triangular discretization","interactions":[],"lastModifiedDate":"2017-08-02T11:26:59","indexId":"70189919","displayToPublicDate":"2012-01-28T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"Application of the control volume mixed finite element method to a triangular discretization","docAbstract":"<p>A control volume mixed finite element scheme for a triangular discretization of a 2-D domain is presented; several control-volume scenarios for use with the scheme are explored. </p>","largerWorkTitle":"Proceedings XVIII International Conference on Computational Methods in Water Resources","conferenceTitle":"XVIII International Conference on Computational Methods in Water Resources","conferenceDate":"June 21-24, 2010","conferenceLocation":"Barcelona, Spain","language":"English","publisher":"CIMNE","usgsCitation":"Naff, R., 2010, Application of the control volume mixed finite element method to a triangular discretization, <i>in</i> Proceedings XVIII International Conference on Computational Methods in Water Resources, no. 7, Barcelona, Spain, June 21-24, 2010, 8 p.","productDescription":"8 p.","ipdsId":"IP-019045","costCenters":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"links":[{"id":344536,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://congress.cimne.com/cmwr2010/Proceedings/Start.html"},{"id":344474,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"issue":"7","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5980419ee4b0a38ca278938a","contributors":{"authors":[{"text":"Naff, R.L.","contributorId":86349,"corporation":false,"usgs":true,"family":"Naff","given":"R.L.","affiliations":[],"preferred":false,"id":706771,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70007220,"text":"ofr20101093 - 2010 - Whole-rock analyses of core samples from the 1988 drilling of Kilauea Iki lava lake, Hawaii","interactions":[],"lastModifiedDate":"2012-02-02T00:16:01","indexId":"ofr20101093","displayToPublicDate":"2012-01-25T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2010-1093","title":"Whole-rock analyses of core samples from the 1988 drilling of Kilauea Iki lava lake, Hawaii","docAbstract":"This report presents and evaluates 64 major-element analyses of previously unanalyzed Kilauea Iki drill core, plus three samples from the 1959 and 1960 eruptions of Kilauea, obtained by X-ray fluorescence (XRF) analysis during the period 1992 to 1995. All earlier major-element analyses of Kilauea Iki core, obtained by classical (gravimetric) analysis, were reported and evaluated in Helz and others (1994). In order to assess how well the newer data compare with this earlier suite of analyses, a subset of 24 samples, which had been analyzed by classical analysis, was reanalyzed using the XRF technique; those results are presented and evaluated in this report also. The XRF analyses have not been published previously. This report also provides an overview of how the chemical variations observed in these new data fit in with the chemical zonation patterns and petrologic processes inferred in earlier studies of Kilauea Iki.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20101093","usgsCitation":"Helz, R.T., and Taggart, J.E., 2010, Whole-rock analyses of core samples from the 1988 drilling of Kilauea Iki lava lake, Hawaii: U.S. Geological Survey Open-File Report 2010-1093, iv, 29 p.; Tables, https://doi.org/10.3133/ofr20101093.","productDescription":"iv, 29 p.; Tables","temporalStart":"1988-01-01","temporalEnd":"1988-12-31","costCenters":[{"id":596,"text":"U.S. Geological Survey National Center","active":false,"usgs":true}],"links":[{"id":116378,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ofr_2010_1093.jpg"},{"id":115704,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/of/2010/1093/","linkFileType":{"id":5,"text":"html"}}],"state":"Hawai'i","otherGeospatial":"Kilauea Iki Lava Lake","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bd08de4b08c986b32ef0c","contributors":{"authors":[{"text":"Helz, Rosalind Tuthill 0000-0003-1550-0684","orcid":"https://orcid.org/0000-0003-1550-0684","contributorId":85587,"corporation":false,"usgs":true,"family":"Helz","given":"Rosalind","email":"","middleInitial":"Tuthill","affiliations":[],"preferred":false,"id":356128,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Taggart, Joseph E. Jr.","contributorId":66317,"corporation":false,"usgs":true,"family":"Taggart","given":"Joseph","suffix":"Jr.","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":356127,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70003733,"text":"70003733 - 2010 - Using a distribution and conservation status weighted hotspot approach to identify areas in need of conservation action to benefit Idaho bird species","interactions":[],"lastModifiedDate":"2012-02-02T00:16:02","indexId":"70003733","displayToPublicDate":"2012-01-24T09:57:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2900,"text":"Northwest Science","onlineIssn":"2161-9859","printIssn":"0029-344X","active":true,"publicationSubtype":{"id":10}},"title":"Using a distribution and conservation status weighted hotspot approach to identify areas in need of conservation action to benefit Idaho bird species","docAbstract":"Identification of biodiversity hotspots (hereafter, hotspots) has become a common strategy to delineate important areas for wildlife conservation. However, the use of hotspots has not often incorporated important habitat types, ecosystem services, anthropogenic activity, or consistency in identifying important conservation areas. The purpose of this study was to identify hotspots to improve avian conservation efforts for Species of Greatest Conservation Need (SGCN) in the state of Idaho, United States. We evaluated multiple approaches to define hotspots and used a unique approach based on weighting species by their distribution size and conservation status to identify hotspot areas. All hotspot approaches identified bodies of water (Bear Lake, Grays Lake, and American Falls Reservoir) as important hotspots for Idaho avian SGCN, but we found that the weighted approach produced more congruent hotspot areas when compared to other hotspot approaches. To incorporate anthropogenic activity into hotspot analysis, we grouped species based on their sensitivity to specific human threats (i.e., urban development, agriculture, fire suppression, grazing, roads, and logging) and identified ecological sections within Idaho that may require specific conservation actions to address these human threats using the weighted approach. The Snake River Basalts and Overthrust Mountains ecological sections were important areas for potential implementation of conservation actions to conserve biodiversity. Our approach to identifying hotspots may be useful as part of a larger conservation strategy to aid land managers or local governments in applying conservation actions on the ground.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Northwest Science","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Northwest Scientific Association","publisherLocation":"Seattle, WA","doi":"10.3955/046.084.0206","usgsCitation":"Haines, A.M., Leu, M., Svancara, L.K., Wilson, G., and Scott, J.M., 2010, Using a distribution and conservation status weighted hotspot approach to identify areas in need of conservation action to benefit Idaho bird species: Northwest Science, v. 84, no. 2, p. 170-182, https://doi.org/10.3955/046.084.0206.","productDescription":"13 p.","startPage":"170","endPage":"182","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true},{"id":342,"text":"Idaho Cooperative Fish and Wildlife Research Unit","active":false,"usgs":true}],"links":[{"id":115754,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.3955/046.084.0206","linkFileType":{"id":5,"text":"html"}},{"id":204615,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Idaho","volume":"84","issue":"2","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bc025e4b08c986b329f60","contributors":{"authors":[{"text":"Haines, Aaron M.","contributorId":15758,"corporation":false,"usgs":true,"family":"Haines","given":"Aaron","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":348568,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Leu, Matthias","contributorId":68393,"corporation":false,"usgs":true,"family":"Leu","given":"Matthias","affiliations":[],"preferred":false,"id":348570,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Svancara, Leona K.","contributorId":20071,"corporation":false,"usgs":true,"family":"Svancara","given":"Leona","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":348569,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Wilson, Gina","contributorId":90871,"corporation":false,"usgs":true,"family":"Wilson","given":"Gina","email":"","affiliations":[],"preferred":false,"id":348571,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Scott, J. Michael","contributorId":98877,"corporation":false,"usgs":true,"family":"Scott","given":"J.","email":"","middleInitial":"Michael","affiliations":[],"preferred":false,"id":348572,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70003525,"text":"70003525 - 2010 - Use and environmental occurrence of pharmaceuticals in freestall dairy farms with manured forage fields","interactions":[],"lastModifiedDate":"2018-10-10T12:28:52","indexId":"70003525","displayToPublicDate":"2012-01-22T15:08:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1565,"text":"Environmental Science & Technology","onlineIssn":"1520-5851","printIssn":"0013-936X","active":true,"publicationSubtype":{"id":10}},"title":"Use and environmental occurrence of pharmaceuticals in freestall dairy farms with manured forage fields","docAbstract":"<p><span>Environmental releases of antibiotics from concentrated animal feeding operations (CAFOs) are of increasing regulatory concern. This study investigates the use and occurrence of antibiotics in dairy CAFOs and their potential transport into first-encountered groundwater. On two dairies we conducted four seasonal sampling campaigns, each across 13 animal production and waste management systems and associated environmental pathways: application to animals, excretion to surfaces, manure collection systems, soils, and shallow groundwater. Concentrations of antibiotics were determined using on line solid phase extraction (OLSPE) and liquid chromatography-tandem mass spectrometry (LC/MS/MS) with electrospray ionization (ESI) for water samples, and accelerated solvent extraction (ASE) LC/MS/MS with ESI for solid samples. A variety of antibiotics were applied at both farms leading to antibiotics excretion of several hundred grams per farm per day. Sulfonamides, tetracyclines, and their epimers/isomers, and lincomycin were most frequently detected. Yet, despite decades of use, antibiotic occurrence appeared constrained to within farm boundaries. The most frequent antibiotic detections were associated with lagoons, hospital pens, and calf hutches. When detected below ground, tetracyclines were mainly found in soils, whereas sulfonamides were found in shallow groundwater reflecting key differences in their physicochemical properties. In manure lagoons, 10 compounds were detected including tetracyclines and trimethoprim. Of these 10, sulfadimethoxine, sulfamethazine, and lincomycin were found in shallow groundwater directly downgradient from the lagoons. Antibiotics were sporadically detected in field surface samples on fields with manure applications, but not in underlying sandy soils. Sulfadimethoxine and sulfamethazine were detected in shallow groundwater near field flood irrigation gates, but at highly attenuated levels.</span></p>","language":"English","publisher":"ACS Publications","publisherLocation":"Washington, D.C.","doi":"10.1021/es100834s","usgsCitation":"Watanabe, N., Bergamaschi, B., Loftin, K.A., Meyer, M.T., and Harter, T., 2010, Use and environmental occurrence of pharmaceuticals in freestall dairy farms with manured forage fields: Environmental Science & Technology, v. 44, no. 17, p. 6591-6600, https://doi.org/10.1021/es100834s.","productDescription":"10 p.","startPage":"6591","endPage":"6600","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true},{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true},{"id":589,"text":"Toxic Substances Hydrology Program","active":true,"usgs":true}],"links":[{"id":475501,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2931405","text":"Publisher Index Page"},{"id":204680,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"44","issue":"17","noUsgsAuthors":false,"publicationDate":"2010-08-10","publicationStatus":"PW","scienceBaseUri":"505bbe4de4b08c986b3294fe","contributors":{"authors":[{"text":"Watanabe, Naoko","contributorId":102629,"corporation":false,"usgs":true,"family":"Watanabe","given":"Naoko","affiliations":[],"preferred":false,"id":347633,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bergamaschi, Brian A. 0000-0002-9610-5581","orcid":"https://orcid.org/0000-0002-9610-5581","contributorId":73241,"corporation":false,"usgs":true,"family":"Bergamaschi","given":"Brian A.","affiliations":[],"preferred":false,"id":347632,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Loftin, Keith A. 0000-0001-5291-876X kloftin@usgs.gov","orcid":"https://orcid.org/0000-0001-5291-876X","contributorId":868,"corporation":false,"usgs":true,"family":"Loftin","given":"Keith","email":"kloftin@usgs.gov","middleInitial":"A.","affiliations":[{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true}],"preferred":true,"id":347630,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Meyer, Michael T. 0000-0001-6006-7985 mmeyer@usgs.gov","orcid":"https://orcid.org/0000-0001-6006-7985","contributorId":866,"corporation":false,"usgs":true,"family":"Meyer","given":"Michael","email":"mmeyer@usgs.gov","middleInitial":"T.","affiliations":[{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true}],"preferred":true,"id":347629,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Harter, Thomas","contributorId":48705,"corporation":false,"usgs":true,"family":"Harter","given":"Thomas","affiliations":[],"preferred":false,"id":347631,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70003594,"text":"70003594 - 2010 - Update on geographic spread of invasive lionfishes (<i>Pterois volitans</i> [Linnaeus, 1758] and <i>P. miles</i> [Bennett, 1828]) in the Western North Atlantic Ocean, Caribbean Sea and Gulf of Mexico","interactions":[],"lastModifiedDate":"2012-02-02T00:16:02","indexId":"70003594","displayToPublicDate":"2012-01-22T14:54:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":868,"text":"Aquatic Invasions","active":true,"publicationSubtype":{"id":10}},"title":"Update on geographic spread of invasive lionfishes (<i>Pterois volitans</i> [Linnaeus, 1758] and <i>P. miles</i> [Bennett, 1828]) in the Western North Atlantic Ocean, Caribbean Sea and Gulf of Mexico","docAbstract":"The Indo-Pacific lionfishes (<i>Pterois volitans</i> [Linnaeus, 1758] and <i>P. miles</i> [Bennett, 1828]: Family Scorpaenidae) are the first nonnative marine fishes to establish in the Western North Atlantic/Caribbean region. The chronology of the invasion was reported last year (Schofield 2009) using records from the US Geological Survey's Nonindigenous Aquatic Species database. This article provides an update of lionfish geographic spread (as of October 2010) and predictions of future range.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Aquatic Invasions","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Regional Euro-Asian Biological Invasions Centre","publisherLocation":"Helsinki, Finland","usgsCitation":"Schofield, P., 2010, Update on geographic spread of invasive lionfishes (<i>Pterois volitans</i> [Linnaeus, 1758] and <i>P. miles</i> [Bennett, 1828]) in the Western North Atlantic Ocean, Caribbean Sea and Gulf of Mexico: Aquatic Invasions, v. 5, p. S117-S122.","productDescription":"6 p.","startPage":"S117","endPage":"S122","costCenters":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"links":[{"id":204683,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":115744,"rank":300,"type":{"id":11,"text":"Document"},"url":"https://www.aquaticinvasions.net/2010/Supplement/AI_2010_5_S1_Schofield.pdf","linkFileType":{"id":1,"text":"pdf"}}],"volume":"5","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bbd10e4b08c986b328eae","contributors":{"authors":[{"text":"Schofield, Pamela J. 0000-0002-8752-2797","orcid":"https://orcid.org/0000-0002-8752-2797","contributorId":30306,"corporation":false,"usgs":true,"family":"Schofield","given":"Pamela J.","affiliations":[{"id":566,"text":"Southeast Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":347871,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70003561,"text":"70003561 - 2010 - Unmodeled observation error induces bias when inferring patterns and dynamics of species occurrence via aural detections","interactions":[],"lastModifiedDate":"2021-01-13T16:55:42.10747","indexId":"70003561","displayToPublicDate":"2012-01-22T14:42:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1465,"text":"Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Unmodeled observation error induces bias when inferring patterns and dynamics of species occurrence via aural detections","docAbstract":"<p><span>The recent surge in the development and application of species occurrence models has been associated with an acknowledgment among ecologists that species are detected imperfectly due to observation error. Standard models now allow unbiased estimation of occupancy probability when false negative detections occur, but this is conditional on no false positive detections and sufficient incorporation of explanatory variables for the false negative detection process. These assumptions are likely reasonable in many circumstances, but there is mounting evidence that false positive errors and detection probability heterogeneity may be much more prevalent in studies relying on auditory cues for species detection (e.g., songbird or calling amphibian surveys). We used field survey data from a simulated calling anuran system of known occupancy state to investigate the biases induced by these errors in dynamic models of species occurrence. Despite the participation of expert observers in simplified field conditions, both false positive errors and site detection probability heterogeneity were extensive for most species in the survey. We found that even low levels of false positive errors, constituting as little as 1% of all detections, can cause severe overestimation of site occupancy, colonization, and local extinction probabilities. Further, unmodeled detection probability heterogeneity induced substantial underestimation of occupancy and overestimation of colonization and local extinction probabilities. Completely spurious relationships between species occurrence and explanatory variables were also found. Such misleading inferences would likely have deleterious implications for conservation and management programs. We contend that all forms of observation error, including false positive errors and heterogeneous detection probabilities, must be incorporated into the estimation framework to facilitate reliable inferences about occupancy and its associated vital rate parameters.</span></p>","language":"English","publisher":"Ecological Society of America","doi":"10.1890/09-1287.1","usgsCitation":"McClintock, B.T., Bailey, L., Pollock, K.H., and Simons, T.R., 2010, Unmodeled observation error induces bias when inferring patterns and dynamics of species occurrence via aural detections: Ecology, v. 91, no. 8, p. 2446-2454, https://doi.org/10.1890/09-1287.1.","productDescription":"9 p.","startPage":"2446","endPage":"2454","numberOfPages":"9","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":475502,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1890/09-1287.1","text":"Publisher Index 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,{"id":70003377,"text":"70003377 - 2010 - USGS perspectives on an integrated approach to watershed and coastal management","interactions":[],"lastModifiedDate":"2012-02-02T00:16:02","indexId":"70003377","displayToPublicDate":"2012-01-22T14:33:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2678,"text":"Marine Technology Society Journal","active":true,"publicationSubtype":{"id":10}},"title":"USGS perspectives on an integrated approach to watershed and coastal management","docAbstract":"The writers discuss three critically important steps necessary for achieving the goal for improved integrated approaches on watershed and coastal protection and management. These steps involve modernization of monitoring networks, creation of common data and web services infrastructures, and development of modeling, assessment, and research tools. Long-term monitoring is needed for tracking the effectiveness approaches for controlling land-based sources of nutrients, contaminants, and invasive species. The integration of mapping and monitoring with conceptual and mathematical models, and multidisciplinary assessments is important in making well-informed decisions. Moreover, a better integrated data network is essential for mapping, statistical, and modeling applications, and timely dissemination of data and information products to a broad community of users.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Marine Technology Society Journal","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Marine Technology Society","publisherLocation":"Washington, D.C.","usgsCitation":"Larsen, M.C., Hamilton, P.A., Haines, J.W., and Mason, 2010, USGS perspectives on an integrated approach to watershed and coastal management: Marine Technology Society Journal, v. 44, no. 6, p. 18-21.","productDescription":"4 p.","startPage":"18","endPage":"21","costCenters":[{"id":509,"text":"Office of the Associate Director for Water","active":true,"usgs":true}],"links":[{"id":204679,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"44","issue":"6","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bbbd6e4b08c986b328870","contributors":{"authors":[{"text":"Larsen, Matthew C. mclarsen@usgs.gov","contributorId":1568,"corporation":false,"usgs":true,"family":"Larsen","given":"Matthew","email":"mclarsen@usgs.gov","middleInitial":"C.","affiliations":[],"preferred":true,"id":347059,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hamilton, Pixie A. pahamilt@usgs.gov","contributorId":1068,"corporation":false,"usgs":true,"family":"Hamilton","given":"Pixie","email":"pahamilt@usgs.gov","middleInitial":"A.","affiliations":[],"preferred":true,"id":347058,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Haines, John W. 0000-0002-6475-8924 jhaines@usgs.gov","orcid":"https://orcid.org/0000-0002-6475-8924","contributorId":509,"corporation":false,"usgs":true,"family":"Haines","given":"John","email":"jhaines@usgs.gov","middleInitial":"W.","affiliations":[{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":347057,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mason, Jr. 0000-0002-3998-3468 rrmason@usgs.gov","orcid":"https://orcid.org/0000-0002-3998-3468","contributorId":2090,"corporation":false,"usgs":true,"family":"Mason","suffix":"Jr.","email":"rrmason@usgs.gov","affiliations":[{"id":509,"text":"Office of the Associate Director for Water","active":true,"usgs":true}],"preferred":true,"id":347060,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70004024,"text":"70004024 - 2010 - Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population","interactions":[],"lastModifiedDate":"2017-08-23T09:19:05","indexId":"70004024","displayToPublicDate":"2012-01-22T14:15:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1324,"text":"Conservation Genetics","active":true,"publicationSubtype":{"id":10}},"title":"Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population","docAbstract":"The threatened California Black Rail lives under dense marsh vegetation, is rarely observed, flies weakly and has a highly disjunct distribution. The largest population of rails is found in 8&ndash;10 large wetlands in San Francisco Bay (SF Bay), but a population was recently discovered in the foothills of the Sierra Nevada Mountains (Foothills), within a wetland network comprised of over 200 small marshes. Using microsatellite and mitochondrial analyses, our objectives were to determine the origins, connectivity and demography of this recently-discovered population. Analyses of individuals from the Foothills (<i>n</i> = 31), SF Bay (<i>n</i> = 31), the Imperial Valley (<i>n</i> = 6) and the East Coast (<i>n</i> = 3), combined with rigorous power evaluations, provided valuable insights into past history and current dynamics of the species in Northern California that challenge conventional wisdom about the species. The Foothills and SF Bay populations have diverged strongly from the Imperial Valley population, even more strongly than from individuals of the East Coast subspecies. The data also suggest a historical presence of the species in the Foothills. The SF Bay and Foothills populations had similar estimated effective population size over the areas sampled and appeared linked by a strongly asymmetrical migration pattern, with a greater probability of movement from the Foothills to SF Bay than vice versa. Random mating was inferred in the Foothills, but local substructure among marshes and inbreeding were detected in SF Bay, suggesting different dispersal patterns within each location. The unexpected dimensions of Black Rail demography and population structure suggested by these analyses and their potential importance for management are discussed.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Conservation Genetics","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Springer","publisherLocation":"Amsterdam, Netherlands","doi":"10.1007/s10592-010-0126-4","usgsCitation":"Girard, P., Takekawa, J.Y., and Beissinger, S.R., 2010, Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population: Conservation Genetics, v. 11, no. 6, p. 2409-2418, https://doi.org/10.1007/s10592-010-0126-4.","productDescription":"10 p.","startPage":"2409","endPage":"2418","numberOfPages":"10","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":475504,"rank":101,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s10592-010-0126-4","text":"Publisher Index Page"},{"id":204686,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":115741,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1007/s10592-010-0126-4","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"California","otherGeospatial":"San Francisco Bay;Sierra Nevada Mountains","volume":"11","issue":"6","noUsgsAuthors":false,"publicationDate":"2010-09-07","publicationStatus":"PW","scienceBaseUri":"505bbc29e4b08c986b328a8d","contributors":{"authors":[{"text":"Girard, Philippe","contributorId":98471,"corporation":false,"usgs":true,"family":"Girard","given":"Philippe","email":"","affiliations":[],"preferred":false,"id":350190,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Takekawa, John Y. 0000-0003-0217-5907 john_takekawa@usgs.gov","orcid":"https://orcid.org/0000-0003-0217-5907","contributorId":176168,"corporation":false,"usgs":true,"family":"Takekawa","given":"John","email":"john_takekawa@usgs.gov","middleInitial":"Y.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":false,"id":350189,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Beissinger, Steven R.","contributorId":100534,"corporation":false,"usgs":true,"family":"Beissinger","given":"Steven","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":350191,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70003508,"text":"70003508 - 2010 - Two-dimensional time dependent hurricane overwash and erosion modeling at Santa Rosa Island","interactions":[],"lastModifiedDate":"2012-02-02T00:15:57","indexId":"70003508","displayToPublicDate":"2012-01-22T13:27:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1262,"text":"Coastal Engineering","active":true,"publicationSubtype":{"id":10}},"title":"Two-dimensional time dependent hurricane overwash and erosion modeling at Santa Rosa Island","docAbstract":"A 2DH numerical, model which is capable of computing nearshore circulation and morphodynamics, including dune erosion, breaching and overwash, is used to simulate overwash caused by Hurricane Ivan (2004) on a barrier island. The model is forced using parametric wave and surge time series based on field data and large-scale numerical model results. The model predicted beach face and dune erosion reasonably well as well as the development of washover fans. Furthermore, the model demonstrated considerable quantitative skill (upwards of 66% of variance explained, maximum bias - 0.21 m) in hindcasting the post-storm shape and elevation of the subaerial barrier island when a sheet flow sediment transport limiter was applied. The prediction skill ranged between 0.66 and 0.77 in a series of sensitivity tests in which several hydraulic forcing parameters were varied. The sensitivity studies showed that the variations in the incident wave height and wave period affected the entire simulated island morphology while variations in the surge level gradient between the ocean and back barrier bay affected the amount of deposition on the back barrier and in the back barrier bay. The model sensitivity to the sheet flow sediment transport limiter, which served as a proxy for unknown factors controlling the resistance to erosion, was significantly greater than the sensitivity to the hydraulic forcing parameters. If no limiter was applied the simulated morphological response of the barrier island was an order of magnitude greater than the measured morphological response.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Coastal Engineering","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Elsevier","publisherLocation":"Amsterdam, Netherlands","doi":"10.1016/j.coastaleng.2010.02.006","usgsCitation":"McCall, R., Van Theil de Vries, J.S., Plant, N., Van Dongeren, A., Roelvink, J., Thompson, D., and Reniers, A., 2010, Two-dimensional time dependent hurricane overwash and erosion modeling at Santa Rosa Island: Coastal Engineering, v. 57, no. 7, p. 668-683, https://doi.org/10.1016/j.coastaleng.2010.02.006.","productDescription":"16 p.","startPage":"668","endPage":"683","costCenters":[{"id":574,"text":"St. Petersburg Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":487158,"rank":101,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://zenodo.org/record/3416273","text":"External Repository"},{"id":115737,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1016/j.coastaleng.2010.02.006","linkFileType":{"id":5,"text":"html"}},{"id":204588,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"57","issue":"7","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bb99ce4b08c986b327cbb","contributors":{"authors":[{"text":"McCall, R.T.","contributorId":54733,"corporation":false,"usgs":true,"family":"McCall","given":"R.T.","email":"","affiliations":[],"preferred":false,"id":347572,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Van Theil de Vries, J. S. M.","contributorId":71312,"corporation":false,"usgs":true,"family":"Van Theil de Vries","given":"J.","email":"","middleInitial":"S. M.","affiliations":[],"preferred":false,"id":347574,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Plant, N.G.","contributorId":94023,"corporation":false,"usgs":true,"family":"Plant","given":"N.G.","email":"","affiliations":[],"preferred":false,"id":347576,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Van Dongeren, A. R.","contributorId":55572,"corporation":false,"usgs":true,"family":"Van Dongeren","given":"A. R.","affiliations":[],"preferred":false,"id":347573,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Roelvink, J.A.","contributorId":92421,"corporation":false,"usgs":true,"family":"Roelvink","given":"J.A.","email":"","affiliations":[],"preferred":false,"id":347575,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Thompson, D.M.","contributorId":16570,"corporation":false,"usgs":true,"family":"Thompson","given":"D.M.","email":"","affiliations":[],"preferred":false,"id":347571,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Reniers, A.J.H.M.","contributorId":95612,"corporation":false,"usgs":true,"family":"Reniers","given":"A.J.H.M.","email":"","affiliations":[],"preferred":false,"id":347577,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70003403,"text":"70003403 - 2010 - Two new species of shrews (Soricidae) from the western highlands of Guatemala","interactions":[],"lastModifiedDate":"2012-02-02T00:16:01","indexId":"70003403","displayToPublicDate":"2012-01-17T10:41:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2373,"text":"Journal of Mammalogy","onlineIssn":"1545-1542","printIssn":"0022-2372","active":true,"publicationSubtype":{"id":10}},"title":"Two new species of shrews (Soricidae) from the western highlands of Guatemala","docAbstract":"The broad-clawed shrews (Soricomorpha: Soricidae: <i>Cryptotis</i>) encompass a clade of 5 species&mdash;<i>Cryptotis alticolus</i> (Merriam), <i>C. goldmani</i> (Merriam), <i>C. goodwini</i> Jackson, <i>C. griseoventris</i> Jackson, and <i>C. peregrinus</i> (Merriam)&mdash;that is known collectively as the <i>Cryptotis goldmani</i> group and is characterized by broadened forefeet, elongated and broadened fore claws, and broadened humeri. These shrews are distributed in highland regions from central Mexico to Honduras. Two broad-clawed shrews, <i>C. goodwini</i> and <i>C. griseoventris</i>, occur in southern Mexico and Guatemala and are presumed sister species whose primary distinguishing feature is the larger size of <i>C. goodwini</i>. In an investigation of variation within and between these 2 species, I studied characteristics of the postcranial skeleton. Statistical analyses of a variety of character suites indicate that the forelimb morphology in this group exhibits less intraspecific variation and greater interspecific variation than cranio-mandibular morphology, although most skull characters support groupings based on forelimb characters. Together, these characters define 4 distinct groups among the specimens examined. <i>C. griseoventris</i> is restricted to the northern highlands of Chiapas, Mexico, and <i>C. goodwini</i> occurs in the southern highlands of Chiapas and Guatemala. Herein, I describe 2 new species of broad-clawed shrews from the Sierra de los Cuchumatanes, Guatemala.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Journal of Mammalogy","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"American Society of Mammalogists","publisherLocation":"Lawrence, KS","doi":"10.1644/09-MAMM-A-346.1","usgsCitation":"Woodman, N., 2010, Two new species of shrews (Soricidae) from the western highlands of Guatemala: Journal of Mammalogy, v. 91, no. 3, p. 566-579, https://doi.org/10.1644/09-MAMM-A-346.1.","productDescription":"14 p.","startPage":"566","endPage":"579","numberOfPages":"14","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":475505,"rank":101,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"http://www.bioone.org/doi/10.1644/09-MAMM-A-346.1","text":"External Repository"},{"id":204618,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":21678,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1644/09-MAMM-A-346.1","linkFileType":{"id":5,"text":"html"}}],"country":"Mexico","volume":"91","issue":"3","noUsgsAuthors":false,"publicationDate":"2010-06-16","publicationStatus":"PW","scienceBaseUri":"505bb965e4b08c986b327bfa","contributors":{"authors":[{"text":"Woodman, Neal 0000-0003-2689-7373 nwoodman@usgs.gov","orcid":"https://orcid.org/0000-0003-2689-7373","contributorId":3547,"corporation":false,"usgs":true,"family":"Woodman","given":"Neal","email":"nwoodman@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":347157,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70003672,"text":"70003672 - 2010 - Transcriptome analysis of rainbow trout infected with high and low virulence strains of Infectious hematopoietic necrosis virus","interactions":[],"lastModifiedDate":"2012-02-02T00:16:01","indexId":"70003672","displayToPublicDate":"2012-01-15T09:56:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1653,"text":"Fish and Shellfish Immunology","active":true,"publicationSubtype":{"id":10}},"title":"Transcriptome analysis of rainbow trout infected with high and low virulence strains of Infectious hematopoietic necrosis virus","docAbstract":"There are three main genetic lineages or genogroups of Infectious hematopoietic necrosis virus (IHNV) in N. America. Strains representing the M genogroup are more virulent in rainbow trout relative to the U genogroup. In this study, we used microarray analysis to evaluate potential mechanisms responsible for host-specific virulence in rainbow trout that were given intraperitoneal injections of buffer or a representative M or U type virus strain. Reverse transcriptase quantitative PCR (RT-qPCR) was used to assess viral load and gene expression of select immune genes. Viral load was significantly higher in trout infected with the M virus starting at 24 h post-infection (p.i.) and continuing until 72 h p.i. Microarray analysis of the 48 h time point revealed 153 up-regulated and 248 down-regulated features in response to M virus infection but only 62 up-regulated and 49 down-regulated features following U virus infection. Translation and transcription features were among the most frequent down-regulated features in response to M virus infection and may be associated with the host cell shutoff phenomenon. A greater host cell shutoff response by the M virus may facilitate subversion of the host cell transcriptional machinery and enhance viral replication, suggesting the M virus may be better optimized to manipulate the rainbow trout transcriptional and translational machinery. Anti-viral associated features were the most commonly up-regulated features. A common set of features were up-regulated in both the M and U infection groups, but were induced to a higher magnitude in the M infection group. Gene expression of the anti-viral genes Mx-1 and Vig-1 was correlated but not entirely dependent on viral load in the anterior kidney. Slower replication of the U virus may allow the host more time to induce protective anti-viral immune mechanisms.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Fish and Shellfish Immunology","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Elsevier","publisherLocation":"Amsterdam, Netherlands","doi":"10.1016/j.fsi.2010.09.007","usgsCitation":"Purcell, M., Marjara, I.S., Batts, W., Kurath, G., and Hansen, J.D., 2010, Transcriptome analysis of rainbow trout infected with high and low virulence strains of Infectious hematopoietic necrosis virus: Fish and Shellfish Immunology, v. 30, no. 1, p. 84-93, https://doi.org/10.1016/j.fsi.2010.09.007.","productDescription":"10 p.","startPage":"84","endPage":"93","numberOfPages":"10","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":204572,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":115676,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1016/j.fsi.2010.09.007","linkFileType":{"id":5,"text":"html"}}],"volume":"30","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bb6c9e4b08c986b326e8e","contributors":{"authors":[{"text":"Purcell, Maureen K.","contributorId":104214,"corporation":false,"usgs":true,"family":"Purcell","given":"Maureen K.","affiliations":[],"preferred":false,"id":348271,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Marjara, Inderjit Singh","contributorId":24490,"corporation":false,"usgs":true,"family":"Marjara","given":"Inderjit","email":"","middleInitial":"Singh","affiliations":[],"preferred":false,"id":348269,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Batts, William","contributorId":101337,"corporation":false,"usgs":true,"family":"Batts","given":"William","affiliations":[],"preferred":false,"id":348270,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kurath, Gael 0000-0003-3294-560X gkurath@usgs.gov","orcid":"https://orcid.org/0000-0003-3294-560X","contributorId":2629,"corporation":false,"usgs":true,"family":"Kurath","given":"Gael","email":"gkurath@usgs.gov","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":348267,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hansen, John D. 0000-0002-3006-2734 jhansen@usgs.gov","orcid":"https://orcid.org/0000-0002-3006-2734","contributorId":3440,"corporation":false,"usgs":true,"family":"Hansen","given":"John","email":"jhansen@usgs.gov","middleInitial":"D.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":348268,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70003456,"text":"70003456 - 2010 - Traffic effects on bird counts on North American Breeding Bird Survey routes","interactions":[],"lastModifiedDate":"2017-05-07T11:42:15","indexId":"70003456","displayToPublicDate":"2012-01-15T09:45:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3544,"text":"The Auk","onlineIssn":"1938-4254","printIssn":"0004-8038","active":true,"publicationSubtype":{"id":10}},"title":"Traffic effects on bird counts on North American Breeding Bird Survey routes","docAbstract":"The North American Breeding Bird Survey (BBS) is an annual roadside survey used to estimate population change in >420 species of birds that breed in North America. Roadside sampling has been criticized, in part because traffic noise can interfere with bird counts. Since 1997, data have been collected on the numbers of vehicles that pass during counts at each stop. We assessed the effect of traffic by modeling total vehicles as a covariate of counts in hierarchical Poisson regression models used to estimate population change. We selected species for analysis that represent birds detected at low and high abundance and birds with songs of low and high frequencies. Increases in vehicle counts were associated with decreases in bird counts in most of the species examined. The size and direction of these effects remained relatively constant between two alternative models that we analyzed. Although this analysis indicated only a small effect of incorporating traffic effects when modeling roadside counts of birds, we suggest that continued evaluation of changes in traffic at BBS stops should be a component of future BBS analyses.","language":"English","publisher":"American Ornithological Society","doi":"10.1525/auk.2009.09056","usgsCitation":"Griffith, E.H., Sauer, J., and Royle, J., 2010, Traffic effects on bird counts on North American Breeding Bird Survey routes: The Auk, v. 127, no. 2, p. 387-393, https://doi.org/10.1525/auk.2009.09056.","productDescription":"7 p.","startPage":"387","endPage":"393","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":475506,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1525/auk.2009.09056","text":"Publisher Index Page"},{"id":204571,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","volume":"127","issue":"2","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bb6b1e4b08c986b326e0a","contributors":{"authors":[{"text":"Griffith, Emily H.","contributorId":70108,"corporation":false,"usgs":true,"family":"Griffith","given":"Emily","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":347343,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sauer, John R. jrsauer@usgs.gov","contributorId":3737,"corporation":false,"usgs":true,"family":"Sauer","given":"John R.","email":"jrsauer@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":false,"id":347342,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Royle, J. Andrew 0000-0003-3135-2167","orcid":"https://orcid.org/0000-0003-3135-2167","contributorId":80808,"corporation":false,"usgs":true,"family":"Royle","given":"J. Andrew","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":347344,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70003327,"text":"70003327 - 2010 - Tidal calibration of Plate Boundary Observatory borehole strainmeters: Roles of vertical and shear coupling","interactions":[],"lastModifiedDate":"2012-02-02T00:16:01","indexId":"70003327","displayToPublicDate":"2012-01-08T16:06:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2312,"text":"Journal of Geophysical Research","active":true,"publicationSubtype":{"id":10}},"title":"Tidal calibration of Plate Boundary Observatory borehole strainmeters: Roles of vertical and shear coupling","docAbstract":"A multicomponent borehole strainmeter directly measures changes in the diameter of its cylindrical housing at several azimuths. To transform these measurements to formation strains requires a calibration matrix, which must be estimated by analyzing the installed strainmeter's response to known strains. Typically, theoretical calculations of Earth tidal strains serve as the known strains. This paper carries out such an analysis for 12 Plate Boundary Observatory (PBO) borehole strainmeters, postulating that each of the strainmeters' four gauges responds (\"couples\") to all three horizontal components of the formation strain tensor, as well as to vertical strain. Orientation corrections are also estimated. The fourth extensometer in each PBO strainmeter provides redundant information used to reduce the chance that coupling coefficients could be misleadingly fit to inappropriate theoretical tides. Satisfactory fits between observed and theoretically calculated tides were obtained for three PBO strainmeters in California, where the calculated tides are corroborated by other instrumentation, as well as for six strainmeters in Oregon and Washington, where no other instruments have ever recorded Earth tidal strain. Several strainmeters have unexpectedly large coupling coefficients for vertical strain, which increases the strainmeter's response to atmospheric pressure. Vertical coupling diminishes, or even changes the sign of, the apparent response to areal strain caused by Earth tides or deep Earth processes because near the free surface, vertical strains are opposite in sign to areal strain. Vertical coupling does not impair the shear strain response, however. PBO borehole strainmeters can provide calibrated shear strain time series of transient strain associated with tectonic or magmatic processes.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Journal of Geophysical Research","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"American Geophysical Union","publisherLocation":"Washington, D.C.","doi":"10.1029/2009JB006407","usgsCitation":"Roeloffs, E., 2010, Tidal calibration of Plate Boundary Observatory borehole strainmeters: Roles of vertical and shear coupling: Journal of Geophysical Research, v. 115, no. B06405, 25 p., https://doi.org/10.1029/2009JB006407.","productDescription":"25 p.","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":475507,"rank":101,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2009jb006407","text":"Publisher Index Page"},{"id":204170,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":112482,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1029/2009JB006407","linkFileType":{"id":5,"text":"html"}}],"volume":"115","issue":"B06405","noUsgsAuthors":false,"publicationDate":"2010-06-24","publicationStatus":"PW","scienceBaseUri":"505bb366e4b08c986b325d8c","contributors":{"authors":[{"text":"Roeloffs, Evelyn","contributorId":35417,"corporation":false,"usgs":true,"family":"Roeloffs","given":"Evelyn","affiliations":[],"preferred":false,"id":346904,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70003734,"text":"70003734 - 2010 - Thresholds in forest bird occurrence as a function of the amount of early-seral broadleaf forest at landscape scales","interactions":[],"lastModifiedDate":"2012-02-02T00:16:02","indexId":"70003734","displayToPublicDate":"2012-01-08T15:30:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1450,"text":"Ecological Applications","active":true,"publicationSubtype":{"id":10}},"title":"Thresholds in forest bird occurrence as a function of the amount of early-seral broadleaf forest at landscape scales","docAbstract":"Recent declines in broadleaf-dominated, early-seral forest globally as a function of intensive forest management and/or fire suppression have raised concern about the viability of populations dependent on such forest types. However, quantitative information about the strength and direction of species associations with broadleaf cover at landscape scales are rare. Uncovering such habitat relationships is essential for understanding the demography of species and in developing sound conservation strategies. It is particularly important to detect points in habitat reduction where rates of population decline may accelerate or the likelihood of species occurrence drops rapidly (i.e., thresholds). Here, we use a large avian point-count data set (<i>N</i> = 4375) from southwestern and northwestern Oregon along with segmented logistic regression to test for thresholds in forest bird occurrence as a function of broadleaf forest and early-seral broadleaf forest at local (150-m radius) and landscape (500&ndash;2000-m radius) scales. All 12 bird species examined showed positive responses to either broadleaf forest in general, and/or early-seral broadleaf forest. However, regional variation in species response to these conditions was high. We found considerable evidence for landscape thresholds in bird species occurrence as a function of broadleaf cover; threshold models received substantially greater support than linear models for eight of 12 species. Landscape thresholds in broadleaf forest ranged broadly from 1.35% to 24.55% mean canopy cover. Early-seral broadleaf thresholds tended to be much lower (0.22&ndash;1.87%). We found a strong negative relationship between the strength of species association with early-seral broadleaf forest and 42-year bird population trends; species most associated with this forest type have declined at the greatest rates. Taken together, these results provide the first support for the hypothesis that reductions in broadleaf-dominated early-seral forest due to succession and intensive forest management have led to population declines of constituent species in the Pacific northwestern United States. Forest management treatments that maintain or restore even small amounts of broadleaf vegetation could mitigate further declines.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Ecological Applications","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Ecological Society of America","publisherLocation":"Ithaca, NY","doi":"10.1890/09-1305.1","usgsCitation":"Betts, M., Hagar, J., Rivers, J., Alexander, J., McGarigal, K., and McComb, B., 2010, Thresholds in forest bird occurrence as a function of the amount of early-seral broadleaf forest at landscape scales: Ecological Applications, v. 20, no. 8, p. 2116-2130, https://doi.org/10.1890/09-1305.1.","productDescription":"15 p.","startPage":"2116","endPage":"2130","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":112480,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1890/09-1305.1","linkFileType":{"id":5,"text":"html"}},{"id":204275,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Oregon","volume":"20","issue":"8","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bb355e4b08c986b325d1e","contributors":{"authors":[{"text":"Betts, M.G.","contributorId":58386,"corporation":false,"usgs":true,"family":"Betts","given":"M.G.","email":"","affiliations":[],"preferred":false,"id":348576,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hagar, J.C.","contributorId":46208,"corporation":false,"usgs":true,"family":"Hagar","given":"J.C.","affiliations":[],"preferred":false,"id":348575,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rivers, J.W.","contributorId":63151,"corporation":false,"usgs":true,"family":"Rivers","given":"J.W.","email":"","affiliations":[],"preferred":false,"id":348577,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Alexander, J.D.","contributorId":16562,"corporation":false,"usgs":true,"family":"Alexander","given":"J.D.","email":"","affiliations":[],"preferred":false,"id":348574,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"McGarigal, K.","contributorId":7831,"corporation":false,"usgs":true,"family":"McGarigal","given":"K.","email":"","affiliations":[],"preferred":false,"id":348573,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"McComb, B.C.","contributorId":102196,"corporation":false,"usgs":true,"family":"McComb","given":"B.C.","email":"","affiliations":[],"preferred":false,"id":348578,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70003710,"text":"70003710 - 2010 - Thermomagmatic evolution of Mesoproterozoic crust in the Blue Ridge of SW Virginia and NW North Carolina: Evidence from U-Pb geochronology and zircon geothermometry","interactions":[],"lastModifiedDate":"2012-02-02T00:16:01","indexId":"70003710","displayToPublicDate":"2012-01-08T15:04:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1726,"text":"GSA Memoirs","active":true,"publicationSubtype":{"id":10}},"title":"Thermomagmatic evolution of Mesoproterozoic crust in the Blue Ridge of SW Virginia and NW North Carolina: Evidence from U-Pb geochronology and zircon geothermometry","docAbstract":"New geologic mapping, petrology, and U-Pb geochronology indicate that Mesoproterozoic crust near Mount Rogers consists of felsic to mafic meta-igneous rocks emplaced over 260 m.y. The oldest rocks are compositionally diverse and migmatitic, whereas younger granitoids are porphyritic to porphyroclastic. Cathodoluminescence imaging indicates that zircon from four representative units preserves textural evidence of multiple episodes of growth, including domains of igneous, metamorphic, and inherited origin. Sensitive high-resolution ion microprobe (SHRIMP) trace-element analyses indicate that metamorphic zircon is characterized by lower Th/U, higher Yb/Gd, and lower overall rare earth element (REE) concentrations than igneous zircon. SHRIMP U-Pb isotopic analyses of zircon define three episodes of magmatism: 1327 &plusmn; 7 Ma, 1180&ndash;1155 Ma, and 1061 &plusmn; 5 Ma. Crustal recycling is recorded by inherited igneous cores of 1.33&ndash;1.29 Ga age in 1161 &plusmn; 7 Ma meta-monzogranite. Overlapping ages of igneous and metamorphic crystallization indicate that plutons of ca. 1170 and 1060 Ma age were emplaced during episodes of regional heating. Local development of hornblende + plagioclase + quartz &plusmn; clinopyroxene indicates that prograde metamorphism at 1170&ndash;1145 Ma and 1060&ndash;1020 Ma reached upper-amphibolite-facies conditions, with temperatures estimated using Ti-in-zircon geothermometry at ~740 &plusmn; 40 &deg;C during both episodes. The chemical composition of 1327 &plusmn; 7 Ma orthogranofels from migmatite preserves the first evidence of arc-generated rocks in the Blue Ridge, indicating a subduction-related environment that may have been comparable to similar-age systems in inliers of the Northern Appalachians and the Composite Arc belt of Canada. Granitic magmatism at 1180&ndash;1155 Ma and ca. 1060 Ma near Mount Rogers was contemporaneous with anorthosite-mangerite-charnockite-granite (AMCG) plutonism in the Northern Appalachian inliers and Canadian Grenville Province. Metamorphism at ca. 1160 and 1060 Ma correlates temporally with the Shawinigan orogeny and Ottawan phase of the Grenvillian orogeny, respectively, suggesting that the Blue Ridge was part of Rodinia dating back to ca. 1180 Ma.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"GSA Memoirs","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Geological Society of America","publisherLocation":"Boulder, CO","usgsCitation":"Tollo, R.P., Aleinikoff, J.N., Wooden, J., Mazdab, F.K., Southworth, S., and Fanning, M.C., 2010, Thermomagmatic evolution of Mesoproterozoic crust in the Blue Ridge of SW Virginia and NW North Carolina: Evidence from U-Pb geochronology and zircon geothermometry: GSA Memoirs, v. 206, p. 589-596.","productDescription":"8 p.","startPage":"589","endPage":"596","numberOfPages":"38","costCenters":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":112479,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://memoirs.gsapubs.org/content/206/859.short","linkFileType":{"id":5,"text":"html"}},{"id":204274,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"North Carolina;Virginia","volume":"206","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bb28be4b08c986b325886","contributors":{"authors":[{"text":"Tollo, Richard P.","contributorId":6465,"corporation":false,"usgs":true,"family":"Tollo","given":"Richard","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":348426,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Aleinikoff, John N. 0000-0003-3494-6841 jaleinikoff@usgs.gov","orcid":"https://orcid.org/0000-0003-3494-6841","contributorId":1478,"corporation":false,"usgs":true,"family":"Aleinikoff","given":"John","email":"jaleinikoff@usgs.gov","middleInitial":"N.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":348425,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wooden, Joseph L.","contributorId":32209,"corporation":false,"usgs":true,"family":"Wooden","given":"Joseph L.","affiliations":[],"preferred":false,"id":348427,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mazdab, Frank K.","contributorId":37468,"corporation":false,"usgs":true,"family":"Mazdab","given":"Frank","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":348428,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Southworth, Scott","contributorId":93933,"corporation":false,"usgs":true,"family":"Southworth","given":"Scott","affiliations":[],"preferred":false,"id":348430,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Fanning, Mark C.","contributorId":53080,"corporation":false,"usgs":true,"family":"Fanning","given":"Mark","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":348429,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
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