Environmental DNA (eDNA) data make it possible to measure and monitor biodiversity at unprecedented resolution and scale. As use-cases multiply and scientific consensus grows regarding the value of eDNA analysis, public agencies have an opportunity to decide how and where eDNA data fit into their mandates. Within the United States, many federal and state agencies are individually using eDNA data in various applications and developing relevant scientific expertise. A national strategy for eDNA implementation would capitalize on recent scientific developments, providing a common set of next-generation tools for natural resource management and public health protection. Such a strategy would avoid patchwork and possibly inconsistent guidelines in different agencies, smoothing the way for efficient uptake of eDNA data in management. Because eDNA analysis is already in widespread use in both ocean and freshwater settings, we focus here on applications in these environments. However, we foresee the broad adoption of eDNA analysis to meet many resource management issues across the nation because the same tools have immediate terrestrial and aerial applications.
Effective undergraduate statistical education requires training using real-world data. Textbook datasets seldom match the complexities and messiness of real-world data and finding these datasets can be challenging for educators. Consulting and industrial datasets often have nondisclosure agreements. Academic datasets often require subject area expertise beyond those of a general education or lack connections to real-world applications. Many governments, including the United States, now require the release of data from projects they directly complete or fund though grants and contracts. We show how statistical educators may find datasets and incorporate them into courses. Specifically, we use two examples from the U.S. Geological Survey (USGS) and one example from the ecology literature. We demonstrate the use of these datasets in an upper-level analysis of variance (ANOVA) class. In addition to describing how we found the datasets, we describe how to include them into course work and the course’s student assessments. We have used these datasets over multiple semesters and included student feedback from these courses. Although our examples focus on an ANOVA class, the general methods for finding data shared here could be used for statistical classes ranging from high school to graduate education. Supplementary materials for this article are available online.
","language":"English","publisher":"Taylor and Francis","doi":"10.1080/26939169.2023.2195459","usgsCitation":"Bennie, B., and Erickson, R.A., 2024, Obtaining and applying public data for training students in technical statistical writing: Case studies with data from U.S. Geological Survey and general ecological literature: Journal of Statistics and Data Science Education, v. 32, no. 2, p. 217-226, https://doi.org/10.1080/26939169.2023.2195459.","productDescription":"10 p.","startPage":"217","endPage":"226","ipdsId":"IP-137259","costCenters":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"links":[{"id":441278,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/26939169.2023.2195459","text":"Publisher Index Page"},{"id":416986,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"32","issue":"2","noUsgsAuthors":false,"publicationDate":"2023-05-11","publicationStatus":"PW","contributors":{"authors":[{"text":"Bennie, Barb","contributorId":244792,"corporation":false,"usgs":false,"family":"Bennie","given":"Barb","email":"","affiliations":[{"id":48977,"text":"UW-La Crosse","active":true,"usgs":false}],"preferred":false,"id":872396,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Erickson, Richard A. 0000-0003-4649-482X rerickson@usgs.gov","orcid":"https://orcid.org/0000-0003-4649-482X","contributorId":5455,"corporation":false,"usgs":true,"family":"Erickson","given":"Richard","email":"rerickson@usgs.gov","middleInitial":"A.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":872397,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}} ,{"id":70254877,"text":"70254877 - 2024 - Optimal management decisions are robust to unknown dynamics in an amphibian metapopulation plagued by disease","interactions":[],"lastModifiedDate":"2024-06-11T23:58:12.591184","indexId":"70254877","displayToPublicDate":"2023-05-03T18:54:25","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":774,"text":"Animal Conservation","active":true,"publicationSubtype":{"id":10}},"title":"Optimal management decisions are robust to unknown dynamics in an amphibian metapopulation plagued by disease","docAbstract":"Identifying conservation actions to recover threatened species can be challenging due to many ecological uncertainties. For example, major threats to a species' conservation are commonly known or suspected, but the specific impacts on population or metapopulation dynamics can be uncertain. This is frequently the case with emerging infectious diseases, including chytridiomycosis, a global driver of amphibian population declines caused by the fungal pathogens Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans. While these diseases are known to cause amphibian declines and extirpations, the mechanisms of their landscape-scale spread are still largely unknown. Such uncertainty can lead to inaction which may jeopardize timely recovery of a species. Decision analysis is a pragmatic approach to making transparent and defensible decisions while dealing with uncertainties. We investigated whether optimal actions aimed at recovering boreal toad (Anaxyrus boreas boreas) metapopulations in the southern Rocky Mountains are robust to the unknown dynamics of Bd spread using value of information and regret analyses. Value of information is a decision-analytic tool for calculating the value of new information in terms of performance on management objectives, while regret measures the cost of acting under incorrect information. We further conducted a stochastic sensitivity analysis to identify the relative effects of metapopulation parameters on system dynamics. We found optimal actions were robust to the unknown dynamics of Bd spread. While boreal toad breeding occurrence is highly sensitive to Bd distribution, the optimal decision is not. Resolving the unknown dynamics of Bd spread would lead to a minimal gain of less than one breeding toad subpopulation at the end of 50 years, given the currently available management actions. Applying a decision-analytic framework coupled with value of information and regret analyses can help frame how uncertainties affect decisions in a way that empowers decision makers.
This chapter explains the rationale for considering shallowly buried (0 to >5 m depth) water ice in the mid-latitudes of Mars as a resource to support future human missions, and describes a NASA-funded effort to map that ice with existing orbital remote-sensing data. In recent decades, numerous studies have used various datasets to investigate the presence and stability of water ice in the Martian shallow subsurface, with the aim of understanding the planet’s recent climate history. As part of a renewed effort to prepare for human Mars missions, NASA has undertaken a more resource-focused approach. Here we describe the Mars Subsurface Water Ice Mapping (SWIM) team’s efforts to characterize the distribution of buried water-ice resources across all longitudes from 60°S to 60°N latitude through the integration of multiple datasets. Deriving composite measures for the presence of accessible ice from a diverse range of remote sensing techniques with unique resolutions and caveats is a challenging problem. To enable data synthesis, the team developed a methodology that assigns values of ice consistency for mapped detections of hydrogen from a neutron spectrometer, thermal behavior from various thermal spectrometers, multiscale geomorphology from imagery and elevation data, and surface and subsurface echoes from a radar sounder. Faced with diverse sensing depths and footprints for these datasets, the team has been pursuing an optimal approach to best represent multi-dataset ice consistency. The current formulation includes the use of weighting factors tuned to depth zones of interest for resource extraction. In the absence of dedicated ground-truth data, the validity of the team’s efforts is assessed by comparing the maps to the locations of fresh, ice-exposing impacts. The highest ice-consistency values occur within discrete zones poleward of ~40° latitude, where ice is relatively shallow, but positive values extend well into the ~20°–30° latitude zone, which is preferable for landing sites due to engineering considerations.
","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Handbook of Space Resources","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"Springer","doi":"10.1007/978-3-030-97913-3_16","usgsCitation":"Putzig, N.E., Morgan, G.A., Sizemore, H.G., Hollibaugh Baker, D.M., Petersen, E.I., Pathare, A.V., Dundas, C., Bramson, A.M., Courville, S.W., Perry, M.R., Nerozzi, S., Bain, Z.M., Hoover, R.H., Campbell, B.A., Mastrogiuseppe, M., Mellon, M.T., Seu, R., and Smith, I.B., 2024, Ice resource mapping on Mars, chap. of Handbook of Space Resources, p. 583-616, https://doi.org/10.1007/978-3-030-97913-3_16.","productDescription":"34 p.","startPage":"583","endPage":"616","ipdsId":"IP-127348","costCenters":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"links":[{"id":433001,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"otherGeospatial":"Mars","noUsgsAuthors":false,"publicationDate":"2023-04-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Putzig, Nathaniel E","contributorId":269987,"corporation":false,"usgs":false,"family":"Putzig","given":"Nathaniel","email":"","middleInitial":"E","affiliations":[{"id":24584,"text":"PSI","active":true,"usgs":false}],"preferred":false,"id":911307,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Morgan, Gareth A 0000-0002-9513-8736","orcid":"https://orcid.org/0000-0002-9513-8736","contributorId":229487,"corporation":false,"usgs":false,"family":"Morgan","given":"Gareth","email":"","middleInitial":"A","affiliations":[{"id":24584,"text":"PSI","active":true,"usgs":false}],"preferred":false,"id":911308,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sizemore, Hanna G 0000-0002-6641-2388","orcid":"https://orcid.org/0000-0002-6641-2388","contributorId":229472,"corporation":false,"usgs":false,"family":"Sizemore","given":"Hanna","email":"","middleInitial":"G","affiliations":[{"id":24584,"text":"PSI","active":true,"usgs":false}],"preferred":false,"id":911309,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hollibaugh Baker, David M","contributorId":293262,"corporation":false,"usgs":false,"family":"Hollibaugh Baker","given":"David","email":"","middleInitial":"M","affiliations":[{"id":40052,"text":"NASA Goddard","active":true,"usgs":false}],"preferred":false,"id":911310,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Petersen, Eric I","contributorId":229489,"corporation":false,"usgs":false,"family":"Petersen","given":"Eric","email":"","middleInitial":"I","affiliations":[{"id":41657,"text":"U. 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Studies of interior basins within the northern Tibetan Plateau provide new sediment accumulation, provenance, paleodrainage, and deformation timing data that enable a reconstruction of the far-field tectono-geomorphic evolution of the rising Tibetan Plateau. Along the northern plateau margin, topographic growth in the West Qinling Belt is inferred to have initiated in the Eocene, nearly coeval with the India-Asia collision, as well as in the late Miocene. However, geological knowledge about the intervening period remains at present enigmatic, and the kinematics and dynamics are uncertain. This study presents a multidisciplinary data set from the intermontane Anhua-Huicheng Basin (AHB; Gansu Province, China) to fill this gap. Magnetostratigraphic dating, regional mapping, and sedimentological analysis imply that contractional deformation and thrust-top basin systems formed within the West Qinling Belt in the Oligocene (not later than ca. 24 Ma). A combination of observations including paleocurrent changes, detrital zircon U-Pb age variations, and appearance of growth strata along the Anhua-Huicheng Basin reveal the rapid uplift of the West Qinling Belt at ca. 15 Ma. Sedimentation in the intermontane basins ended after the late Miocene (ca. 8 Ma), when the region experienced intrabasinal deformation, uplift, and erosion with the establishment of an external drainage system. Since the late Miocene, the growth of the West Qinling Belt reached a climax with the lack of substantial contractional deformation in Cenozoic sequences heralding the onset of the modern kinematic regime and attainment of high elevation. Observed transitions in the tectonostratigraphy and paleodrainage define different phases of deformation and plateau-wide shifts in stress reorganization, which led to the northward growth and later lateral expansion of the Tibetan Plateau.
Habitat suitability models for freshwater mussels can inform conservation of these imperiled animals. Riverscape-scale hydrogeomorphic variables were previously used to predict suitable mussel habitat in the Meramec River basin, Missouri. We evaluated transferability of the Meramec River habitat suitability model to the Gasconade and Little Black rivers, in the Ozark Highlands ecoregion, Missouri. The best-fit models relied on transferring and adapting the original modeling framework to better represent the unique habitat characteristics of each river. Mussel bed occurrence in both rivers was associated with reaches that were classified as pools. Mussel beds in the Gasconade River were also associated with laterally stable reaches adjacent to small bluffs, distant from gravel bars, and with higher stream power indices. Mussel beds in the Little Black River were associated with reaches with higher surface water availability during low-flow conditions, lower stream power indices, and bluffs located downstream. Our results show that existing habitat models can be transferred to other streams with similar environmental conditions, but differences in watershed characteristics can affect transferability.
","language":"English","publisher":"Freshwater Mollusk Conservation Society","doi":"10.31931/fmbc-d-21-00005","usgsCitation":"Hartman, J.H., Rosenberger, A.E., Key, K.N., and Lindner, G.A., 2024, Assessing potential habitat for freshwater mussels by transferring a habitat suitability model within the Ozark Ecoregion, Missouri: Freshwater Mollusk Biology and Conservation, v. 26, no. 1, p. 32-44, https://doi.org/10.31931/fmbc-d-21-00005.","productDescription":"13 p.","startPage":"32","endPage":"44","ipdsId":"IP-128365","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":441286,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.31931/fmbc-d-21-00005","text":"Publisher Index Page"},{"id":433222,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Missouri","otherGeospatial":"Ozark Highlands","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -89.48277091924116,\n 37.56996609191134\n ],\n [\n -90.43622532050725,\n 38.406472750075494\n ],\n [\n -90.85898340408788,\n 38.88418454557933\n ],\n [\n -92.88282529356854,\n 38.3923742230769\n ],\n [\n -92.75689735377867,\n 36.62295716381152\n ],\n [\n -90.08542605966407,\n 36.48567275312169\n ],\n [\n -89.48277091924116,\n 37.56996609191134\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"26","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Hartman, Jordan H.","contributorId":341437,"corporation":false,"usgs":false,"family":"Hartman","given":"Jordan","email":"","middleInitial":"H.","affiliations":[{"id":56209,"text":"Tennessee Tech University","active":true,"usgs":false}],"preferred":false,"id":908416,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rosenberger, Amanda E. 0000-0002-5520-8349 arosenberger@usgs.gov","orcid":"https://orcid.org/0000-0002-5520-8349","contributorId":5581,"corporation":false,"usgs":true,"family":"Rosenberger","given":"Amanda","email":"arosenberger@usgs.gov","middleInitial":"E.","affiliations":[{"id":396,"text":"Missouri Water Science Center","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":908417,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Key, Kayla N.","contributorId":206919,"corporation":false,"usgs":false,"family":"Key","given":"Kayla","email":"","middleInitial":"N.","affiliations":[{"id":13706,"text":"University of Missouri-Columbia","active":true,"usgs":false}],"preferred":false,"id":908418,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lindner, Garth A.","contributorId":201828,"corporation":false,"usgs":false,"family":"Lindner","given":"Garth","email":"","middleInitial":"A.","affiliations":[{"id":36266,"text":"University of Missouri Cooperative Research Unit","active":true,"usgs":false}],"preferred":false,"id":908419,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70240457,"text":"70240457 - 2024 - Wall diffuser velocity effects on American shad (Alosa sapidissima) inside a fishway entrance channel","interactions":[],"lastModifiedDate":"2024-04-10T15:39:18.590353","indexId":"70240457","displayToPublicDate":"2023-03-09T10:20:17","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5513,"text":"Journal of Ecohydraulics","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Wall diffuser velocity effects on American shad (Alosa sapidissima) inside a fishway entrance channel","title":"Wall diffuser velocity effects on American shad (Alosa sapidissima) inside a fishway entrance channel","docAbstract":"Attraction water for fishways is typically introduced through a diffuser inside the entrance channel, often through the floor or wall. In the spring of 2019, this laboratory study examined how 151 adult American Shad (Alosa sapidissima) responded to different gross velocities through a wall diffuser inside a full-scale fishway entrance channel. Two velocity conditions were studied, 0.152 m/s and 0.305 m/s, both without turning vanes inside the auxiliary water channel. The fish were tracked using the passive integrated transponder telemetry technique. The results of the experiments showed no difference in American Shad behavior when exhibited to the low and high velocity treatments. Moreover, shad passed the diffuser in roughly 3 out of every 4 attempts, regardless of the treatment. However, the similarity in shad behavior and passage performance is believed to be more of a result of the similarity in flow fields that resulted from the lack of flow guidance devices inside the auxiliary water channel. These findings therefore highlight the importance of properly maintained flow guidance devices, an often-overlooked component of an auxiliary water system.
","language":"English","publisher":"Taylor & Francis","doi":"10.1080/24705357.2023.2176376","usgsCitation":"Mulligan, K., Rojas, M., Towler, B., Lake, B., and Palmer, R., 2024, Wall diffuser velocity effects on American shad (Alosa sapidissima) inside a fishway entrance channel: Journal of Ecohydraulics, v. 9, no. 1, p. 130-143, https://doi.org/10.1080/24705357.2023.2176376.","productDescription":"14 p.","startPage":"130","endPage":"143","ipdsId":"IP-134333","costCenters":[{"id":50464,"text":"Eastern Ecological Science Center","active":true,"usgs":true}],"links":[{"id":441289,"rank":2,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://www.osti.gov/biblio/1960503","text":"External Repository"},{"id":414371,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"9","issue":"1","noUsgsAuthors":false,"publicationDate":"2023-03-09","publicationStatus":"PW","contributors":{"authors":[{"text":"Mulligan, Kevin B. 0000-0002-3534-4239 kmulligan@usgs.gov","orcid":"https://orcid.org/0000-0002-3534-4239","contributorId":177024,"corporation":false,"usgs":true,"family":"Mulligan","given":"Kevin","email":"kmulligan@usgs.gov","middleInitial":"B.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":863847,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rojas, Marcia","contributorId":300040,"corporation":false,"usgs":false,"family":"Rojas","given":"Marcia","email":"","affiliations":[{"id":37201,"text":"UMass Amherst","active":true,"usgs":false}],"preferred":false,"id":863848,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Towler, Brett","contributorId":141164,"corporation":false,"usgs":false,"family":"Towler","given":"Brett","email":"","affiliations":[{"id":6927,"text":"USFWS, National Wildlife Refuge System","active":true,"usgs":false}],"preferred":false,"id":863849,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lake, Bjorn","contributorId":300039,"corporation":false,"usgs":false,"family":"Lake","given":"Bjorn","email":"","affiliations":[{"id":36803,"text":"NOAA","active":true,"usgs":false}],"preferred":false,"id":863850,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Palmer, Richard","contributorId":202903,"corporation":false,"usgs":false,"family":"Palmer","given":"Richard","affiliations":[],"preferred":false,"id":863851,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70261032,"text":"70261032 - 2024 - Experimentally induced dieback conditions limit Phragmites australis growth","interactions":[],"lastModifiedDate":"2024-11-20T15:51:17.966952","indexId":"70261032","displayToPublicDate":"2023-03-02T00:00:00","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5020,"text":"Microorganisms","active":true,"publicationSubtype":{"id":10}},"title":"Experimentally induced dieback conditions limit Phragmites australis growth","docAbstract":"Phragmites australis is a cosmopolitan grass species common in wetland ecosystems across the world. In much of North America, the non-native subspecies of Phragmites threatens wetland biodiversity, hinders recreation, and is a persistent problem for natural resource managers. In other parts of the world, populations are in decline, as Reed Die-Back Syndrome (RDBS) plagues some Phragmites stands in its native range. RDBS is defined by a clumped growth form, stunted root and shoot growth, premature senescence, and shoot death. RDBS has been associated with a build-up of short-chain fatty acids (SCFAs) and altered bacterial and oomycete communities in soils, but the exact causes are unknown. To control invasive Phragmites populations, we sought to develop treatments that mimic the conditions of RDBS. We applied various SCFA treatments at various concentrations to mesocosm soils growing either Phragmites or native wetland plants. We found that the high-concentration SCFA treatments applied weekly induced strong significant declines in above- and belowground biomass of Phragmites. Declines were significant but slightly weaker in native species. In addition, soil bacterial abundance increased, diversity decreased, and bacterial community composition significantly differed following treatments, such that treated pots maintained a higher relative abundance of Pseudomonadaceae and fewer Acidobacteriaceae than untreated pots. Our results suggest that application of SCFAs to Phragmites can lead to stunted plants and altered soil bacterial communities similar to populations affected by RDBS. However, the lack of species-specificity and intensive application rate may not make this treatment ideal as a widespread management tool.
","language":"English","publisher":"MDPI","doi":"10.3390/microorganisms11030639","usgsCitation":"Bickford, W.A., Snow, D.S., Smith, M.K., Kingsley, K.L., White, J., and Kowalski, K., 2024, Experimentally induced dieback conditions limit Phragmites australis growth: Microorganisms, v. 11, no. 3, 639, 16 p., https://doi.org/10.3390/microorganisms11030639.","productDescription":"639, 16 p.","ipdsId":"IP-147596","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":467059,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3390/microorganisms11030639","text":"Publisher Index Page"},{"id":464344,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Michigan, 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\"}}]}","volume":"11","issue":"3","noUsgsAuthors":false,"publicationDate":"2023-03-02","publicationStatus":"PW","contributors":{"authors":[{"text":"Bickford, Wesley A. 0000-0001-7612-1325 wbickford@usgs.gov","orcid":"https://orcid.org/0000-0001-7612-1325","contributorId":5687,"corporation":false,"usgs":true,"family":"Bickford","given":"Wesley","email":"wbickford@usgs.gov","middleInitial":"A.","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":918970,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Snow, Danielle S.","contributorId":346423,"corporation":false,"usgs":false,"family":"Snow","given":"Danielle","email":"","middleInitial":"S.","affiliations":[{"id":65481,"text":"Akima Systems Engineering","active":true,"usgs":false}],"preferred":false,"id":918971,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Smith, McKenzie K.H.","contributorId":346424,"corporation":false,"usgs":false,"family":"Smith","given":"McKenzie","email":"","middleInitial":"K.H.","affiliations":[{"id":13500,"text":"Tulane University","active":true,"usgs":false}],"preferred":false,"id":918972,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kingsley, Kathryn L.","contributorId":203176,"corporation":false,"usgs":false,"family":"Kingsley","given":"Kathryn","email":"","middleInitial":"L.","affiliations":[{"id":12727,"text":"Rutgers University","active":true,"usgs":false}],"preferred":false,"id":918973,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"White, James F.","contributorId":152046,"corporation":false,"usgs":false,"family":"White","given":"James F.","affiliations":[],"preferred":false,"id":918974,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Kowalski, Kurt P. 0000-0002-8424-4701 kkowalski@usgs.gov","orcid":"https://orcid.org/0000-0002-8424-4701","contributorId":3768,"corporation":false,"usgs":true,"family":"Kowalski","given":"Kurt P.","email":"kkowalski@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":918975,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}} ,{"id":70256550,"text":"70256550 - 2024 - Diversity, distribution, and methodological considerations of haemosporidian infections among Galliformes in Alaska","interactions":[],"lastModifiedDate":"2024-08-22T15:39:21.655581","indexId":"70256550","displayToPublicDate":"2023-02-02T10:32:55","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2025,"text":"International Journal for Parasitology: Parasites and Wildlife","active":true,"publicationSubtype":{"id":10}},"title":"Diversity, distribution, and methodological considerations of haemosporidian infections among Galliformes in Alaska","docAbstract":"Using samples spanning 10-degrees of latitude in Alaska, we provide the first comparative assessment of avian haemosporidia distribution of Arctic Alaska with subarctic host populations for four species of grouse and three species of ptarmigan (Galliformes). We found a high overall prevalence for at least one haemospordian genus (88%; N = 351/400), with spruce grouse (Canachites canadensis) showing the highest prevalence (100%; N = 54/54). Haemoproteus and Plasmodium lineages were only observed within grouse, while Leucocytozoon species were found within both grouse and ptarmigan. Further, different Leucocytozoon lineages were obtained from blood and tissue samples from the same individual, potentially due to the differential timing and duration of blood and tissue stages. Using different primer sets, we were able to identify different Leucocytozoon lineages within 55% (N = 44/80) of sequenced individuals, thereby detecting coinfections that may have otherwise gone undetected. The commonly used Haemoproteus/Plasmodium primers amplified Leucocytozoon for 90% (N = 103/115) of the products sequenced, highlighting the potential value of alternate primers to identify intra-genus coinfections and the importance of obtaining sequence information rather than relying solely on PCR amplification to assess parasite diversity. Overall, this dataset provides baseline information on parasite lineage distributions to assess the range expansion associated with climate change into Arctic regions and underscores methodological considerations for future studies.
","language":"English","publisher":"Elsevier","doi":"10.1016/j.ijppaw.2023.01.008","usgsCitation":"De Amaral, F., Wilson, R., Sonsthagen, S.A., and Sehgal, R., 2024, Diversity, distribution, and methodological considerations of haemosporidian infections among Galliformes in Alaska: International Journal for Parasitology: Parasites and Wildlife, v. 20, p. 122-132, https://doi.org/10.1016/j.ijppaw.2023.01.008.","productDescription":"11 p.","startPage":"122","endPage":"132","ipdsId":"IP-145422","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":441293,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.ijppaw.2023.01.008","text":"Publisher Index Page"},{"id":433065,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United 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Amaral, Faith","contributorId":341101,"corporation":false,"usgs":false,"family":"De Amaral","given":"Faith","email":"","affiliations":[{"id":6690,"text":"San Francisco State University","active":true,"usgs":false}],"preferred":false,"id":907942,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wilson, Robert E.","contributorId":341102,"corporation":false,"usgs":false,"family":"Wilson","given":"Robert E.","affiliations":[{"id":16610,"text":"University of Nebraska-Lincoln","active":true,"usgs":false}],"preferred":false,"id":907943,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sonsthagen, Sarah A. 0000-0001-6215-5874 ssonsthagen@usgs.gov","orcid":"https://orcid.org/0000-0001-6215-5874","contributorId":3711,"corporation":false,"usgs":true,"family":"Sonsthagen","given":"Sarah","email":"ssonsthagen@usgs.gov","middleInitial":"A.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":907944,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sehgal, Ravinder","contributorId":341103,"corporation":false,"usgs":false,"family":"Sehgal","given":"Ravinder","affiliations":[{"id":6690,"text":"San Francisco State University","active":true,"usgs":false}],"preferred":false,"id":907945,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70254867,"text":"70254867 - 2024 - Diet composition and resource overlap of sympatric native and introduced salmonids across neighboring streams during a peak discharge event","interactions":[],"lastModifiedDate":"2024-06-10T16:45:07.388178","indexId":"70254867","displayToPublicDate":"2023-01-24T11:37:09","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2980,"text":"PLoS ONE","active":true,"publicationSubtype":{"id":10}},"title":"Diet composition and resource overlap of sympatric native and introduced salmonids across neighboring streams during a peak discharge event","docAbstract":"Species assemblages composed of non-native and native fishes are found in freshwater systems throughout the world, and interactions such as interspecific competition that may negatively affect native species are expected when non-native species are present. In the Smith River watershed, Montana, rainbow trout were introduced by 1930. Native mountain whitefish and non-native rainbow trout have presumably occurred in sympatry since the introduction of rainbow trout; however, knowledge about how these two species compete with one another for food resources is sparse. We quantified diet compositions of rainbow trout and mountain whitefish in the mainstem Smith River and in a tributary to the Smith River—Sheep Creek—to determine the degree of overlap in the diets of mountain whitefish and rainbow trout in the Smith River and between the mainstem Smith River and a tributary stream. Rainbow trout and mountain whitefish had generalist feeding strategies, which probably contribute to the amicable coexistence of these species. Diet overlap between rainbow trout and mountain whitefish was high (Pianka’s index value = 0.85) in the Smith River and moderate in Sheep Creek (Pianka’s index value = 0.57). Despite overlap in diets, some resource partitioning may alleviate resource competition (e.g., rainbow trout consumed far more Oligochaeta than mountain whitefish but fewer Brachycentridae and Chironomidae). Diet composition of rainbow trout and mountain whitefish did not differ greatly between the Smith River and Sheep Creek. Prey categories most commonly used by mountain whitefish at the population and individual levels (i.e., Ephemeroptera and Trichoptera) are sensitive taxa and many species within these orders have experienced extinctions and population declines. Therefore, future changes in resource availability or competition could be of concern.
","language":"English","publisher":"PLoS","doi":"10.1371/journal.pone.0280833","usgsCitation":"Cox, T.L., Lance, M., Albertson, L., Briggs, M., Dutton, A.J., and Zale, A.V., 2024, Diet composition and resource overlap of sympatric native and introduced salmonids across neighboring streams during a peak discharge event: PLoS ONE, v. 18, no. 1, e0280833, 15 p., https://doi.org/10.1371/journal.pone.0280833.","productDescription":"e0280833, 15 p.","ipdsId":"IP-140511","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":441297,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1371/journal.pone.0280833","text":"Publisher Index Page"},{"id":429778,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Montana","otherGeospatial":"Smith River watershed","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -111.6705061351432,\n 47.43858839540755\n ],\n [\n -111.6705061351432,\n 46.8636526954179\n ],\n [\n -111.00332112471752,\n 46.8636526954179\n ],\n [\n -111.00332112471752,\n 47.43858839540755\n ],\n [\n -111.6705061351432,\n 47.43858839540755\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"18","issue":"1","noUsgsAuthors":false,"publicationDate":"2023-01-24","publicationStatus":"PW","contributors":{"authors":[{"text":"Cox, Tanner L.","contributorId":337858,"corporation":false,"usgs":false,"family":"Cox","given":"Tanner","email":"","middleInitial":"L.","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":902735,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lance, Michael J.","contributorId":337859,"corporation":false,"usgs":false,"family":"Lance","given":"Michael J.","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":902736,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Albertson, Lindsey K.","contributorId":337860,"corporation":false,"usgs":false,"family":"Albertson","given":"Lindsey K.","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":902737,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Briggs, Michelle A.","contributorId":337861,"corporation":false,"usgs":false,"family":"Briggs","given":"Michelle A.","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":902738,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dutton, Adeline J.","contributorId":337862,"corporation":false,"usgs":false,"family":"Dutton","given":"Adeline","email":"","middleInitial":"J.","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":902739,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Zale, Alexander V. 0000-0003-1703-885X","orcid":"https://orcid.org/0000-0003-1703-885X","contributorId":244099,"corporation":false,"usgs":true,"family":"Zale","given":"Alexander","email":"","middleInitial":"V.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":902740,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}} ,{"id":70239326,"text":"70239326 - 2024 - Soil elevation change in mangrove forests and marshes of the greater Everglades: A regional synthesis of surface elevation table-marker horizon (SET-MH) data","interactions":[],"lastModifiedDate":"2024-08-26T13:58:39.390067","indexId":"70239326","displayToPublicDate":"2022-12-20T07:04:56","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1584,"text":"Estuaries and Coasts","active":true,"publicationSubtype":{"id":10}},"title":"Soil elevation change in mangrove forests and marshes of the greater Everglades: A regional synthesis of surface elevation table-marker horizon (SET-MH) data","docAbstract":"Coastal wetlands adapt to rising seas via feedbacks that build soil elevation, which lead to wetland stability. However, accelerated rates of sea-level rise can exceed soil elevation gain, leading to wetland instability and loss. Thus, there is a pressing need to better understand regional and landscape variability in rates of wetland soil elevation change. Here, we conducted a regional synthesis of surface elevation change data from mangrove forests and coastal marshes in the iconic Greater Everglades region of south Florida (USA). We integrated data from 51 sites in which a total of 122 surface elevation table-marker horizon (SET-MH) stations were installed. Several of these sites have been periodically monitored since the 1990s and are among the oldest SET-MH datasets in the world. Rates of surface elevation change ranged from −9.8 to 15.2 mm year−1, indicating some wetlands are keeping pace with sea-level rise while others are at risk of submergence and conversion to open water. Vertical accretion rates ranged from 0.6 to 12.9 mm year−1, and subsurface change rates ranged from −13.5 to 8.6 mm year−1. Rates of surface elevation change were positively related to subsurface change but not vertical accretion. There were no significant relationships between rates of surface elevation change and elevation (NAVD 88) or rates of sea-level rise. Site-specific examples indicate that hurricanes, plant productivity, hydrologic exchange, and proximity to sediment and nutrient inputs are critical but confounding drivers of surface elevation change dynamics in the Greater Everglades region. Collectively, our results reinforce the value of long-term SET-MH data that incorporate spatial variability for advancing understanding of surface elevation change dynamics in coastal wetlands.
Capture and handling techniques for individual-based, long-term research that tracks the life history of animals by recapturing the same individuals for several years has vastly improved study inferences and our understanding of animal ecology. Yet there are corresponding risks to study animals associated with physical trauma or capture myopathy that can occur during or following capture events. Rarely has empirical evidence existed to guide decisions associated with understanding the magnitude of capture-related risks, how to reduce these risks when possible, and implications for mortality censoring and survival estimates. We used data collected from 2,399 capture events of mule deer (Odocoileus hemionus) via helicopter net-gunning to compare daily survival probabilities within a 10-week period centered on a capture event and evaluated how animal age, nutritional condition (body fat), and various handling methods influenced survival before, during, and following a capture event. Direct mortality resulting from capture efforts was 1.59%. Mean daily survival was 0.9993 ± 0.0001 (SE) during the 5-week pre-capture window, was depressed the day of capture at 0.9841 ± 0.0004, and rebounded to 0.9990 ± 0.0008 during the 5-week post-capture window. Neither capture nor handling had a detectable effect on post-capture survival, including handling time (x̄ = 13.30 ± 1.87 min), capture time of year (i.e., Dec or Mar), tooth extraction, and the number of times an animal had been recaptured (2–17 times). Although mortality rate was slightly elevated during capture (resulting from physical trauma associated with capture), age and nutritional condition did not influence the probability of mortality during a capture event. Following a capture event, nutritional condition influenced survival; however, that relationship was consistent with expected effects of nutritional condition on winter survival and independent of capture and handling. Overall survival rates 5 weeks before capture and 5 weeks after capture were not different. A specified window of time with depressed survival following capture and handling was not evident, which contradicts the implementation of a predetermined window often used by researchers and managers for censoring mortalities that occur after capture. Previous notions that censorship of all mortality data in the 2 weeks following capture is unwarranted and risks removal of meaningful data. With previous evidence guiding our protocols for capture (e.g., reduced chase time) and handling (e.g., temperature mitigation), low direct mortality and almost undetectable indirect mortality post capture reinforces the efficacy of helicopter net-gunning for capture and recapture of mule deer in long-term, individual-based studies.
","language":"English","publisher":"The Wildlife Society","doi":"10.1002/jwmg.22333","usgsCitation":"LaSharr, T.N., Dwinnell, S., Wagler, B.L., Sawyer, H., Jakopak, R.P., Ortega, A.C., Wilde, L.R., Kauffman, M., Huggler, K.S., Burke, P.W., Valdez, M., Lionberger, P., Brimeyer, D.G., Scurlock, B., Randall, J., Kaiser, R.C., Thonhoff, M., Fralick, G., and Monteith, K., 2024, Evaluating risks associated with capture and handling of mule deer for individual-based, long-term research: Journal of Wildlife Management, v. 87, no. 1, e22333, 17 p., https://doi.org/10.1002/jwmg.22333.","productDescription":"e22333, 17 p.","ipdsId":"IP-144184","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":441298,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/jwmg.22333","text":"Publisher Index Page"},{"id":430276,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Wyoming","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -110.99857839242031,\n 43.35162132299823\n ],\n [\n -110.99857839242031,\n 41.029189561534366\n ],\n [\n -106.52720038040134,\n 41.029189561534366\n ],\n [\n -106.52720038040134,\n 43.35162132299823\n ],\n [\n -110.99857839242031,\n 43.35162132299823\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"87","issue":"1","noUsgsAuthors":false,"publicationDate":"2022-11-29","publicationStatus":"PW","contributors":{"authors":[{"text":"LaSharr, Tayler N.","contributorId":339084,"corporation":false,"usgs":false,"family":"LaSharr","given":"Tayler","email":"","middleInitial":"N.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903792,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dwinnell, Samantha P. H.","contributorId":339086,"corporation":false,"usgs":false,"family":"Dwinnell","given":"Samantha P. H.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903793,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wagler, Brittany L.","contributorId":339089,"corporation":false,"usgs":false,"family":"Wagler","given":"Brittany","email":"","middleInitial":"L.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903794,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sawyer, Hall","contributorId":339092,"corporation":false,"usgs":false,"family":"Sawyer","given":"Hall","affiliations":[{"id":38051,"text":"Western EcoSystems Technology, Inc.","active":true,"usgs":false}],"preferred":false,"id":903795,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Jakopak, Rhiannon P.","contributorId":339096,"corporation":false,"usgs":false,"family":"Jakopak","given":"Rhiannon","email":"","middleInitial":"P.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903796,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Ortega, Anna C.","contributorId":339098,"corporation":false,"usgs":false,"family":"Ortega","given":"Anna","email":"","middleInitial":"C.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903797,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Wilde, Luke R.","contributorId":339100,"corporation":false,"usgs":false,"family":"Wilde","given":"Luke","email":"","middleInitial":"R.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903798,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Kauffman, Matthew J. 0000-0003-0127-3900","orcid":"https://orcid.org/0000-0003-0127-3900","contributorId":202921,"corporation":false,"usgs":true,"family":"Kauffman","given":"Matthew","middleInitial":"J.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":903799,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Huggler, Katey S.","contributorId":339104,"corporation":false,"usgs":false,"family":"Huggler","given":"Katey","email":"","middleInitial":"S.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903800,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Burke, Patrick W.","contributorId":339107,"corporation":false,"usgs":false,"family":"Burke","given":"Patrick","email":"","middleInitial":"W.","affiliations":[{"id":7217,"text":"Bureau of Land Management","active":true,"usgs":false}],"preferred":false,"id":903801,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Valdez, Miguel","contributorId":339109,"corporation":false,"usgs":false,"family":"Valdez","given":"Miguel","email":"","affiliations":[{"id":7217,"text":"Bureau of Land Management","active":true,"usgs":false}],"preferred":false,"id":903802,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Lionberger, Patrick","contributorId":339112,"corporation":false,"usgs":false,"family":"Lionberger","given":"Patrick","email":"","affiliations":[{"id":36596,"text":"Wyoming Game and Fish Department","active":true,"usgs":false}],"preferred":false,"id":903803,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Brimeyer, Douglas G.","contributorId":20637,"corporation":false,"usgs":true,"family":"Brimeyer","given":"Douglas","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":903804,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Scurlock, Brandon","contributorId":339118,"corporation":false,"usgs":false,"family":"Scurlock","given":"Brandon","affiliations":[{"id":36596,"text":"Wyoming Game and Fish Department","active":true,"usgs":false}],"preferred":false,"id":903805,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Randall, Jill E.","contributorId":339122,"corporation":false,"usgs":false,"family":"Randall","given":"Jill","middleInitial":"E.","affiliations":[{"id":36596,"text":"Wyoming Game and Fish Department","active":true,"usgs":false}],"preferred":false,"id":903806,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Kaiser, Rusty C.","contributorId":339124,"corporation":false,"usgs":false,"family":"Kaiser","given":"Rusty","email":"","middleInitial":"C.","affiliations":[{"id":40027,"text":"United States Forest Service","active":true,"usgs":false}],"preferred":false,"id":903807,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Thonhoff, Mark","contributorId":339127,"corporation":false,"usgs":false,"family":"Thonhoff","given":"Mark","affiliations":[{"id":7217,"text":"Bureau of Land Management","active":true,"usgs":false}],"preferred":false,"id":903808,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Fralick, Gary L.","contributorId":339130,"corporation":false,"usgs":false,"family":"Fralick","given":"Gary L.","affiliations":[{"id":36596,"text":"Wyoming Game and Fish Department","active":true,"usgs":false}],"preferred":false,"id":903809,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Monteith, Kevin L.","contributorId":339133,"corporation":false,"usgs":false,"family":"Monteith","given":"Kevin L.","affiliations":[{"id":36628,"text":"University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":903810,"contributorType":{"id":1,"text":"Authors"},"rank":19}]}} ,{"id":70238469,"text":"70238469 - 2024 - Do pharmaceuticals in the environment pose a risk to wildlife?","interactions":[],"lastModifiedDate":"2024-02-26T15:23:54.846872","indexId":"70238469","displayToPublicDate":"2022-11-18T06:31:33","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1571,"text":"Environmental Toxicology and Chemistry","active":true,"publicationSubtype":{"id":10}},"title":"Do pharmaceuticals in the environment pose a risk to wildlife?","docAbstract":"The vast majority of knowledge related to the question of, “To what extent do pharmaceuticals in the environment pose a risk to wildlife?”, stems from the Asian vulture crisis (>99% decline of some species of old-world vultures on the Indian subcontinent related to the veterinary use of the non-steroidal anti-inflammatory drug (NSAID) diclofenac). The hazard of diclofenac and other NSAIDs (carprofen, flunixin, ketoprofen, nimesulide, phenylbutazone) to vultures and other avian species has since been demonstrated; indeed only meloxicam and tolfenamic acid have been found to be vulture-safe. Since diclofenac was approved for veterinary use in Spain and Italy in 2013 (home to ~95% of vultures in Europe), the risk of NSAIDs to vultures in these countries has become one of the principal concerns related to pharmaceuticals and wildlife. Many of the other bodies of work on pharmaceutical exposure, hazard and risk to wildlife also relate to adverse effects in birds, (e.g., poisoning of scavenging birds in North America and Europe from animal carcasses containing pentobarbital; secondary and even tertiary poisoning of birds exposed to pesticides used in veterinary medicine as cattle dips; migratory birds as a vector for the transfer of antimicrobial and antifungal resistance). While there is some research related to endocrine disruption in reptiles and potential exposure of aerial insectivores, there remain numerous knowledge gaps for risk posed by pharmaceuticals to amphibians, reptiles and mammals. Developing non-invasive sampling techniques and new approach methodologies (e.g., genomic, in vitro, in silico, in ovo) are important if we are to bridge the current knowledge gaps without extensive vertebrate testing.
","language":"English","publisher":"Wiley","doi":"10.1002/etc.5528","usgsCitation":"Bean, T., Chadwick, E.A., Herrero-Villar, M., Mateo, R., Naidoo, V., and Rattner, B., 2024, Do pharmaceuticals in the environment pose a risk to wildlife?: Environmental Toxicology and Chemistry, v. 43, no. 3, p. 595-610, https://doi.org/10.1002/etc.5528.","productDescription":"16 p.","startPage":"595","endPage":"610","ipdsId":"IP-143231","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true},{"id":50464,"text":"Eastern Ecological Science Center","active":true,"usgs":true}],"links":[{"id":441299,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/etc.5528","text":"Publisher Index Page"},{"id":409666,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"43","issue":"3","noUsgsAuthors":false,"publicationDate":"2022-11-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Bean, Thomas G.","contributorId":299328,"corporation":false,"usgs":false,"family":"Bean","given":"Thomas G.","affiliations":[],"preferred":false,"id":857566,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Chadwick, Elizabeth A.","contributorId":299329,"corporation":false,"usgs":false,"family":"Chadwick","given":"Elizabeth","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":857567,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Herrero-Villar, Marta","contributorId":299330,"corporation":false,"usgs":false,"family":"Herrero-Villar","given":"Marta","email":"","affiliations":[],"preferred":false,"id":857568,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mateo, Rafael","contributorId":299331,"corporation":false,"usgs":false,"family":"Mateo","given":"Rafael","affiliations":[],"preferred":false,"id":857569,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Naidoo, Vinny","contributorId":299332,"corporation":false,"usgs":false,"family":"Naidoo","given":"Vinny","affiliations":[],"preferred":false,"id":857570,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Rattner, Barnett A. 0000-0003-3676-2843","orcid":"https://orcid.org/0000-0003-3676-2843","contributorId":95843,"corporation":false,"usgs":true,"family":"Rattner","given":"Barnett A.","affiliations":[{"id":50464,"text":"Eastern Ecological Science Center","active":true,"usgs":true}],"preferred":true,"id":857571,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}} ,{"id":70238350,"text":"70238350 - 2024 - Lingering impacts of the 2014-2016 northeast Pacific marine heatwave on seabird demography in Cook Inlet, Alaska (USA)","interactions":[],"lastModifiedDate":"2024-06-18T13:49:34.94651","indexId":"70238350","displayToPublicDate":"2022-11-10T06:49:25","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2663,"text":"Marine Ecology Progress Series","active":true,"publicationSubtype":{"id":10}},"title":"Lingering impacts of the 2014-2016 northeast Pacific marine heatwave on seabird demography in Cook Inlet, Alaska (USA)","docAbstract":"A protracted period (2014-2016) of anomalously warm water in the northeast Pacific Ocean precipitated an extensive die-off of common murres Uria aalge (hereafter ‘murres’) during 2015-2016, accompanied by reduced colony attendance and reproductive success of murres and black-legged kittiwakes Rissa tridactyla (‘kittiwakes’) starting in 2015. Most murres died of starvation following a large-scale reduction in abundance and quality of forage fish. To assess murre and kittiwake recovery following the marine heatwave, we monitored their demographics at 2 colonies (Chisik and Gull Islands) in Cook Inlet, Alaska (USA), from 2016 to 2019. Compared to historic data (1995-1999), we observed declines and increased variability in colony attendance and productivity across species and colonies, and predation was widespread. At Chisik, where food limitations were common during historic studies, both species experienced substantial population declines and reproductive failures in all 4 years (2016-2019) following the heatwave. At Gull, a typically productive colony during historic studies, murres failed to fledge chicks for 3 years (2016-2018) following the heatwave. By 2019, murre productivity recovered to about half that observed during historic studies (0.28 vs. 0.54 chicks per pair), but populations had declined by half. Kittiwake population size at Gull declined a quarter from historic counts, and reproduction alternated between complete breeding failures (2016/2018) and high productivity (2017/2019). These multi-year demographic impacts indicate lingering effects of the heatwave on kittiwakes and murres through forage fish depletion and increased predator disturbance, and possibly other stressors. It remains unknown whether populations can rebound to historic levels. If so, recovery would likely take decades.
","language":"English","publisher":"Inter-Research Science Publisher","doi":"10.3354/meps14177","usgsCitation":"Schoen, S.K., Arimitsu, M.L., Marsteller, C.E., and Piatt, J., 2024, Lingering impacts of the 2014-2016 northeast Pacific marine heatwave on seabird demography in Cook Inlet, Alaska (USA): Marine Ecology Progress Series, v. 737, p. 121-136, https://doi.org/10.3354/meps14177.","productDescription":"16 p.","startPage":"121","endPage":"136","ipdsId":"IP-139150","costCenters":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"links":[{"id":441302,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3354/meps14177","text":"Publisher Index Page"},{"id":409415,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","otherGeospatial":"Cook Inlet","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -154.86692834754194,\n 58.461367338468136\n ],\n [\n -148.58541629436866,\n 58.461367338468136\n ],\n [\n -148.58541629436866,\n 61.78410578839723\n ],\n [\n -154.86692834754194,\n 61.78410578839723\n ],\n [\n -154.86692834754194,\n 58.461367338468136\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"737","noUsgsAuthors":false,"publicationDate":"2024-06-06","publicationStatus":"PW","contributors":{"authors":[{"text":"Schoen, Sarah K. 0000-0002-5685-5185 sschoen@usgs.gov","orcid":"https://orcid.org/0000-0002-5685-5185","contributorId":5136,"corporation":false,"usgs":true,"family":"Schoen","given":"Sarah","email":"sschoen@usgs.gov","middleInitial":"K.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":857228,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Arimitsu, Mayumi L. 0000-0001-6982-2238 marimitsu@usgs.gov","orcid":"https://orcid.org/0000-0001-6982-2238","contributorId":140501,"corporation":false,"usgs":true,"family":"Arimitsu","given":"Mayumi","email":"marimitsu@usgs.gov","middleInitial":"L.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":857229,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Marsteller, Caitlin Elizabeth 0000-0002-2430-0708","orcid":"https://orcid.org/0000-0002-2430-0708","contributorId":251784,"corporation":false,"usgs":true,"family":"Marsteller","given":"Caitlin","email":"","middleInitial":"Elizabeth","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":857230,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Piatt, John F. 0000-0002-4417-5748","orcid":"https://orcid.org/0000-0002-4417-5748","contributorId":244053,"corporation":false,"usgs":true,"family":"Piatt","given":"John F.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":857231,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70254860,"text":"70254860 - 2024 - Offspring sex ratios are male-biased reflecting sex-biased dispersal in Idaho, USA, wolves.","interactions":[],"lastModifiedDate":"2024-06-10T16:28:27.227161","indexId":"70254860","displayToPublicDate":"2022-09-15T11:24:17","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":982,"text":"Behavioral Ecology and Sociobiology","active":true,"publicationSubtype":{"id":10}},"title":"Offspring sex ratios are male-biased reflecting sex-biased dispersal in Idaho, USA, wolves.","docAbstract":"Offspring sex ratios can vary widely across species, and the reasons for such variation have long intrigued ecologists. For group-living animals, predicting offspring sex ratios as a function of group and environmental characteristics can be challenging. Additionally, mortality of group members can upend traditional theory used to explain offspring sex ratios observed in populations. Gray wolves (Canis lupus) in Idaho, USA, are an excellent study species for asking questions about offspring sex ratios given their group-living behavior and persistent exposure to human-caused mortality. I hypothesized that offspring sex ratios would be influenced by the characteristics of individuals, groups, and populations. I generated genotypes for 419 adult and 400 pup wolves during 2008–2018. There was a significant male-bias in litters of wolf pups with nearly 12% more male pups born than females. The individual, group, and population variables I considered did not have significant associations with offspring sex ratios. Local resource competition helped explain offspring sex ratios in wolves in my study system, but not local resource enhancement theory. Although female helpers have been shown to help slightly more than males, offspring sex ratios did not favor the helping sex suggesting that the overall benefit of female helpers may have been negligible in wolf groups during my study. Three wolf groups consistently overproduced males, the dispersing sex, suggesting that habitat quality was poor in their territories. The male-biased offspring sex ratios observed throughout this population reflect sex-biased dispersal in wolves in Idaho. Such a pattern suggests breeding females may be reducing local resource competition (e.g., mates and successful reproduction) by producing more males than females.
","language":"English","publisher":"Springer Link","doi":"10.1007/s00265-022-03243-0","collaboration":"Idaho Department of Fish and Game","usgsCitation":"Ausband, D.E., 2024, Offspring sex ratios are male-biased reflecting sex-biased dispersal in Idaho, USA, wolves.: Behavioral Ecology and Sociobiology, v. 76, 134, https://doi.org/10.1007/s00265-022-03243-0.","productDescription":"134","ipdsId":"IP-138826","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":429776,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United 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\"}}]}","volume":"76","noUsgsAuthors":false,"publicationDate":"2022-09-15","publicationStatus":"PW","contributors":{"authors":[{"text":"Ausband, David Edward 0000-0001-9204-9837","orcid":"https://orcid.org/0000-0001-9204-9837","contributorId":275329,"corporation":false,"usgs":true,"family":"Ausband","given":"David","email":"","middleInitial":"Edward","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":902724,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}} ,{"id":70234400,"text":"70234400 - 2024 - Nesting and post-fledging predation risk influence diel patterns of songbird fledging","interactions":[],"lastModifiedDate":"2024-03-26T14:22:48.180892","indexId":"70234400","displayToPublicDate":"2022-08-11T08:34:07","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1961,"text":"Ibis","active":true,"publicationSubtype":{"id":10}},"title":"Nesting and post-fledging predation risk influence diel patterns of songbird fledging","docAbstract":"Among stages of avian ontogeny, the act of nest departure or fledging is an abrupt transition into a new environment and a major leap toward independence for offspring. In altricial birds, the timing of fledging is notable in that many species tend to fledge early in the morning. Past studies have proposed nest predation as a key factor driving birds to fledge earlier in the morning (the ‘survival hypothesis’), whereby offspring avoid peak times of nest predation that may occur later in the day. A natural extension of this hypothesis is the predation of offspring post-fledging, whereby offspring are also timing their fledging with future survival prospects outside of the nest. However, few studies have investigated fledging behavior in the context of both nesting and post-fledging predation. To help fill this knowledge gap, we investigated factors driving the timing and duration of fledging across six songbird species in the context of offspring predation: daily nest mortality, post-fledging mortality, and diel patterns of nest predation risk. We found that >60% of songbirds fledged early in the morning, while the peaks in nest predation risk occurred later in the day. Furthermore, species under greater risk of nest predation fledged earlier in the day and in closer succession to their siblings. Parameters of post-fledging mortality were poor predictors of fledging timing, but broods of species under higher risk of post-fledging mortality fledged more rapidly. These results provide evidence in support of the survival hypothesis, and suggest that songbirds fledge in the morning to avoid peak times of nest predation risk that occur later in the day (~8 hours after civil dawn). Such results corroborate past research highlighting predation on dependent offspring as a key factor driving variation in life histories across animal taxa, however, estimates of post-fledging mortality suggests that nest predation alone does not fully explain variation in fledging behavior among species. Future research is therefore needed to investigate the contribution of other factors, such as energetics, parent-offspring conflict, and diel patterns of post-fledging survival, that may help to mediate diel patterns of fledging within and among songbird species.","language":"English","publisher":"Wiley","doi":"10.1111/ibi.13119","usgsCitation":"Jones, T.M., Chiavacci, S.J., Benson, T.J., and Ward, M.P., 2024, Nesting and post-fledging predation risk influence diel patterns of songbird fledging: Ibis, v. 166, no. 2, p. 411-423, https://doi.org/10.1111/ibi.13119.","productDescription":"13 p.","startPage":"411","endPage":"423","ipdsId":"IP-131806","costCenters":[{"id":554,"text":"Science and Decisions Center","active":true,"usgs":true}],"links":[{"id":405097,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.er.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Illinois","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"type\": \"Polygon\",\n \"coordinates\": [\n [\n [\n -91.14257812499999,\n 39.16414104768742\n ],\n [\n -88.72558593749999,\n 39.16414104768742\n ],\n [\n -88.72558593749999,\n 41.64007838467894\n ],\n [\n -91.14257812499999,\n 41.64007838467894\n ],\n [\n -91.14257812499999,\n 39.16414104768742\n ]\n ]\n ]\n }\n }\n ]\n}","volume":"166","issue":"2","noUsgsAuthors":false,"publicationDate":"2022-08-10","publicationStatus":"PW","contributors":{"authors":[{"text":"Jones, Todd M. 0000-0002-1658-6531","orcid":"https://orcid.org/0000-0002-1658-6531","contributorId":294742,"corporation":false,"usgs":false,"family":"Jones","given":"Todd","email":"","middleInitial":"M.","affiliations":[{"id":16984,"text":"University of Illinois at Urbana-Champaign","active":true,"usgs":false}],"preferred":false,"id":848801,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Chiavacci, Scott J. 0000-0003-3579-8377","orcid":"https://orcid.org/0000-0003-3579-8377","contributorId":206161,"corporation":false,"usgs":true,"family":"Chiavacci","given":"Scott","email":"","middleInitial":"J.","affiliations":[{"id":554,"text":"Science and Decisions Center","active":true,"usgs":true}],"preferred":true,"id":848802,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Benson, Thomas J.","contributorId":173625,"corporation":false,"usgs":false,"family":"Benson","given":"Thomas","email":"","middleInitial":"J.","affiliations":[{"id":27259,"text":"Illinois Natural History Survey, University of Illinois, Champaign, IL 61820","active":true,"usgs":false}],"preferred":false,"id":848803,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Ward, Michael P.","contributorId":173620,"corporation":false,"usgs":false,"family":"Ward","given":"Michael","email":"","middleInitial":"P.","affiliations":[{"id":27257,"text":"Dept of Nat Resources and Env Sciences, University of Illinois, Urbana, IL","active":true,"usgs":false}],"preferred":false,"id":848804,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70255216,"text":"70255216 - 2024 - A scaled Denil fishway for upstream passage of Arctic Grayling","interactions":[],"lastModifiedDate":"2024-06-17T14:23:35.438379","indexId":"70255216","displayToPublicDate":"2022-08-10T09:19:23","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5513,"text":"Journal of Ecohydraulics","active":true,"publicationSubtype":{"id":10}},"title":"A scaled Denil fishway for upstream passage of Arctic Grayling","docAbstract":"Denil fishways have been used with varying success to help fish pass impediments to upstream passage such as low head dams or irrigation diversion structures. They have been tested for hydraulic and fish passage performance in laboratory and field settings, usually with only minor modifications to the fishway geometry or dimensions. We tested a reduced (0.6) scale prototype of the standard-sized Denil fishway to determine if the smaller fishway, which requires less water flow, would successfully pass Arctic Grayling (Thymallus arcticus). The scaling factor was informed by analyzing previously published scalable Denil fishway rating equations. A prototype was tested in an open-channel flume using 8 treatments with 3 trials per treatment and 8 fish per trial. Each treatment had a prescribed combination of headwater and tailwater depths. Overall, 93% (178/191) of the fish volitionally entered the fishway and of these 91% (162/178) passed successfully. Entrance and passage were reduced only in treatments with the highest hydraulic slopes and highest water velocities at the downstream end of the fishway (i.e. with high headwater depths and low tailwater depths). The 0.6-scaled Denil fishway is likely a good alternative to standard-sized Denil fishways to enhance upstream mobility of Arctic Grayling in small, water-limited streams.
","language":"English","publisher":"Taylor & Francis","doi":"10.1080/24705357.2022.2105756","usgsCitation":"Plymesser, K., Blank, M., Conley, M., Kappenman, K., Cahoon, J., Dockery, D., and Zale, A.V., 2024, A scaled Denil fishway for upstream passage of Arctic Grayling: Journal of Ecohydraulics, v. 9, no. 1, p. 96-106, https://doi.org/10.1080/24705357.2022.2105756.","productDescription":"11 p.","startPage":"96","endPage":"106","ipdsId":"IP-137179","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"links":[{"id":430274,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"9","issue":"1","noUsgsAuthors":false,"publicationDate":"2022-08-10","publicationStatus":"PW","contributors":{"authors":[{"text":"Plymesser, Katey","contributorId":339030,"corporation":false,"usgs":false,"family":"Plymesser","given":"Katey","email":"","affiliations":[{"id":81234,"text":"Montana State University Civil Engineering Department","active":true,"usgs":false}],"preferred":false,"id":903752,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Blank, Matt","contributorId":339031,"corporation":false,"usgs":false,"family":"Blank","given":"Matt","email":"","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":903753,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Conley, Megan","contributorId":339032,"corporation":false,"usgs":false,"family":"Conley","given":"Megan","email":"","affiliations":[{"id":81234,"text":"Montana State University Civil Engineering Department","active":true,"usgs":false}],"preferred":false,"id":903754,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kappenman, Kevin","contributorId":339033,"corporation":false,"usgs":false,"family":"Kappenman","given":"Kevin","affiliations":[{"id":81237,"text":"USFWS, Bozeman Fish Technology Center","active":true,"usgs":false}],"preferred":false,"id":903755,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Cahoon, Joel","contributorId":339034,"corporation":false,"usgs":false,"family":"Cahoon","given":"Joel","email":"","affiliations":[{"id":81234,"text":"Montana State University Civil Engineering Department","active":true,"usgs":false}],"preferred":false,"id":903756,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Dockery, David","contributorId":339035,"corporation":false,"usgs":false,"family":"Dockery","given":"David","affiliations":[{"id":6654,"text":"USFWS","active":true,"usgs":false}],"preferred":false,"id":903757,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Zale, Alexander V. 0000-0003-1703-885X","orcid":"https://orcid.org/0000-0003-1703-885X","contributorId":244099,"corporation":false,"usgs":true,"family":"Zale","given":"Alexander","email":"","middleInitial":"V.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":903758,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70256717,"text":"70256717 - 2024 - Diet of Dermatemys mawii, an aquatic turtle that relies heavily on terrestrial vegetation","interactions":[],"lastModifiedDate":"2024-09-03T16:03:59.267635","indexId":"70256717","displayToPublicDate":"2022-06-21T10:57:12","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1210,"text":"Chelonian Conservation and Biology","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Diet of Dermatemys mawii, an aquatic turtle that relies heavily on terrestrial vegetation","title":"Diet of Dermatemys mawii, an aquatic turtle that relies heavily on terrestrial vegetation","docAbstract":"Dermatemys mawii is a critically endangered freshwater turtle endemic to Central America. In the wild, these turtles are thought to be wholly herbivorous as adults and feed on a variety of vegetation; however, no studies have quantitatively assessed potential dietary differences based on biotic and abiotic factors. The purpose of our study was to describe and quantify the wild diet of D. mawii and assess differences based on habitat, maturity, and sex. We evaluated the stomach contents of 66 turtles legally harvested by local hunters for personal consumption throughout the country of Belize. Percent volume (by displacement) and percent frequency of each stomach item were used to calculate an index of relative importance (IRI). One algal and 6 plant families contributed to an overall diet composition consisting of leaves, flowers, stems, seedpods, seeds, and fruit. Rocks and invertebrates were also consumed, although we believe these to be incidental consumption. The leaves of the riparian tree Inga edulis were present in 73.1% of turtle stomachs and accounted for almost half of the total volume of all stomach contents combined. We used Spearman rank correlation coefficients to test the null hypothesis that there was no correlation in the rankings of stomach items (i.e., there were differences) when comparing turtles by habitat, age, and sex. There were significant differences in the ranking of food items between river and lagoon habitats, with lagoon turtles relying heavily on the algae Nitella sp.; however, the stomach contents from both habitats were equally diverse (Hrivers = 1.68, Hlagoons = 1.64). There were no differences in IRIs between adults and juveniles or between males and females. Our results emphasize the importance of habitat in D. mawii diet selection and the importance of leaves from riparian plants species that are shed into their aquatic habitats.
","language":"English","publisher":"Chelonian Research Foundation","doi":"10.2744/CCB-1467.1","usgsCitation":"Bishop, N.D., Polisar, J., Eliazar, P.J., Carthy, R., and Bjorndal, K.A., 2024, Diet of Dermatemys mawii, an aquatic turtle that relies heavily on terrestrial vegetation: Chelonian Conservation and Biology, v. 21, no. 1, p. 37-45, https://doi.org/10.2744/CCB-1467.1.","productDescription":"9 p.","startPage":"37","endPage":"45","ipdsId":"IP-134840","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":495012,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.2744/ccb-1467.1","text":"Publisher Index Page"},{"id":433413,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Belize","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[-89.14308,17.80832],[-89.15091,17.95547],[-89.02986,18.00151],[-88.84834,17.8832],[-88.49012,18.48683],[-88.30003,18.49998],[-88.29634,18.35327],[-88.10681,18.34867],[-88.12348,18.07667],[-88.28535,17.64414],[-88.19787,17.48948],[-88.30264,17.13169],[-88.23952,17.03607],[-88.35543,16.53077],[-88.55182,16.26547],[-88.73243,16.23363],[-88.93061,15.88727],[-89.22912,15.88694],[-89.15081,17.01558],[-89.14308,17.80832]]]},\"properties\":{\"name\":\"Belize\"}}]}","volume":"21","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Bishop, Nichole D.","contributorId":273246,"corporation":false,"usgs":false,"family":"Bishop","given":"Nichole","email":"","middleInitial":"D.","affiliations":[{"id":36221,"text":"University of Florida","active":true,"usgs":false}],"preferred":false,"id":908763,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Polisar, John","contributorId":341673,"corporation":false,"usgs":false,"family":"Polisar","given":"John","email":"","affiliations":[{"id":13272,"text":"Wildlife Conservation Society","active":true,"usgs":false}],"preferred":false,"id":908764,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Eliazar, Peter J.","contributorId":341675,"corporation":false,"usgs":false,"family":"Eliazar","given":"Peter","email":"","middleInitial":"J.","affiliations":[{"id":36221,"text":"University of Florida","active":true,"usgs":false}],"preferred":false,"id":908765,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Carthy, Raymond 0000-0001-8978-5083","orcid":"https://orcid.org/0000-0001-8978-5083","contributorId":219303,"corporation":false,"usgs":true,"family":"Carthy","given":"Raymond","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":908762,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Bjorndal, Karen A.","contributorId":96997,"corporation":false,"usgs":false,"family":"Bjorndal","given":"Karen","email":"","middleInitial":"A.","affiliations":[{"id":12567,"text":"Archie Carr Center for Sea Turtle Research, Department of Biology, University of Florida","active":true,"usgs":false}],"preferred":false,"id":908766,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70254960,"text":"70254960 - 2024 - Deltamethrin reduces survival of non-target small mammals","interactions":[],"lastModifiedDate":"2024-06-11T16:52:25.773923","indexId":"70254960","displayToPublicDate":"2022-05-25T11:40:38","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3777,"text":"Wildlife Research","active":true,"publicationSubtype":{"id":10}},"title":"Deltamethrin reduces survival of non-target small mammals","docAbstract":"Context: Vector-borne diseases have caused global pandemics and were responsible for more human deaths than all other causes combined in prior centuries. In the past 60 years, prevention and control programs have helped reduce human mortality from vector-borne diseases, but impacts of those control programs on wildlife populations are not well documented. Insecticides are used to reduce vector-borne diseases in several critically endangered animal populations. Although insecticides are often effective at controlling targeted vectors, their effects on non-target species have rarely been examined.
Aims: To evaluate the impact of deltamethrin (an insecticide) on sympatric non-target species in areas affected by sylvatic plague, a lethal flea-borne zoonosis.
Methods: We compared flea control and the effect of deltamethrin application on survival of non-target small mammals (Peromyscus maniculatus, Chaetodipus hispidus, Microtus spp., and Reithrodontomys megalotis) at three study locations in South Dakota, Colorado, and Idaho, USA.
Key results: Deltamethrin treatments were more effective in reducing fleas on P. maniculatus and Microtus spp. than C. hispidus. Following burrow, nest, and bait-station applications of deltamethrin dust, apparent small mammal survival was greater for non-treatment animals than for flea-reduction animals. However, the magnitude of the difference between treated and non-treated animals differed among host species, study location, time interval, and treatment application method.
Conclusions: Our results suggest that considering the impact of deltamethrin on co-occurring non-target species before widespread application in future insecticide applications is warranted.
Implications: Insecticide application methods warrant consideration when designing plague management actions.
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\"}}]}","volume":"49","issue":"8","noUsgsAuthors":false,"publicationDate":"2022-05-25","publicationStatus":"PW","contributors":{"authors":[{"text":"Goldberg, Amanda R.","contributorId":338153,"corporation":false,"usgs":false,"family":"Goldberg","given":"Amanda R.","affiliations":[{"id":81090,"text":"Department of Biology","active":true,"usgs":false}],"preferred":false,"id":902981,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Biggins, Dean E. 0000-0003-2078-671X bigginsd@usgs.gov","orcid":"https://orcid.org/0000-0003-2078-671X","contributorId":2522,"corporation":false,"usgs":true,"family":"Biggins","given":"Dean","email":"bigginsd@usgs.gov","middleInitial":"E.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":902982,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Ramakrishnan, Shantini","contributorId":338154,"corporation":false,"usgs":false,"family":"Ramakrishnan","given":"Shantini","affiliations":[{"id":81093,"text":"Conservation and Restoration Education Program","active":true,"usgs":false}],"preferred":false,"id":902983,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Bowser, Jonathan W.","contributorId":338156,"corporation":false,"usgs":false,"family":"Bowser","given":"Jonathan","email":"","middleInitial":"W.","affiliations":[{"id":66308,"text":"Fort Collins Science Center","active":true,"usgs":false}],"preferred":false,"id":902986,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Conway, Courtney J. 0000-0003-0492-2953 cconway@usgs.gov","orcid":"https://orcid.org/0000-0003-0492-2953","contributorId":2951,"corporation":false,"usgs":true,"family":"Conway","given":"Courtney","email":"cconway@usgs.gov","middleInitial":"J.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":902980,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Eads, David A. 0000-0002-4247-017X deads@usgs.gov","orcid":"https://orcid.org/0000-0002-4247-017X","contributorId":173639,"corporation":false,"usgs":true,"family":"Eads","given":"David","email":"deads@usgs.gov","middleInitial":"A.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":false,"id":902984,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Wimsatt, Jeffrey","contributorId":338155,"corporation":false,"usgs":false,"family":"Wimsatt","given":"Jeffrey","affiliations":[{"id":81094,"text":"Department of Medicine","active":true,"usgs":false}],"preferred":false,"id":902985,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}} ,{"id":70256665,"text":"70256665 - 2024 - Recovery of working grasslands following a megafire in the southern mixed-grass prairie","interactions":[],"lastModifiedDate":"2024-08-29T16:23:29.084243","indexId":"70256665","displayToPublicDate":"2022-05-05T11:11:32","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3871,"text":"Global Ecology and Conservation","active":true,"publicationSubtype":{"id":10}},"title":"Recovery of working grasslands following a megafire in the southern mixed-grass prairie","docAbstract":"While fire is a necessary ecological driver for grassland systems, Great Plains grasslands have undergone extensive land use change following European settlement (conversion, fragmentation, fire suppression, intensive grazing, etc.). Recent studies have documented the benefits of re-introducing fire to grasslands, but work has largely focused on small-scale, low-intensity fire, often at a pasture scale (i.e., prescribed fire). Over the last 30–40 years, the size and frequency of wildfires in the Great Plains has increased due to long-term fire suppression, woody encroachment, and climate change, resulting in megafires (wildfire >40,000 ha). While there is a wealth of information regarding effects of prescribed fire on Great Plains grasslands, knowledge of how large megafire events affect modern, fragmented working grasslands (i.e., grazed grasslands) is lacking and needed in the face of increasing megafire activity. To assess grassland response and recovery following a 2017 megafire (~254,000 ha), we compared vegetation characteristics pre- (2014–2015) and post-fire (2018–2019) in the mixed-grass prairie of Kansas, USA. We examined linkages between vegetation characteristics and a metric of burn severity (differenced normalized burn ratio [dNBR]) and evaluated megafire effects on limiting reproductive habitat for a declining grassland species, the lesser prairie-chicken (Tympanuchus pallidicinctus). One-year post-fire, we documented increased bare ground (+59%) and decreased visual obstruction (−39%), litter depth (−31%), and forb cover (−35%). Decreased visual obstruction and increased bare ground led to an 81% decrease of lesser prairie-chicken nest habitat in the first-year post-fire, but grassland structure, functional group cover, and available nest habitat largely recovered 2.5 years post-fire. Recovery to pre-fire conditions 2.5 years post-fire was primarily due to elevated growing season precipitation received in the years following the fire (>700 mm/year). Percent cover of grass (β = 0.38) and bare ground (β = −0.36) exhibited the strongest relationships with burn severity pre-fire, but overall grassland structure and functional group cover were not strongly influenced dNBR burn severity post-fire. While our results suggested that recovering grasslands were more homogenous due to the large size of megafire, working grasslands in the mixed-grass prairie appeared largely resilient to the effects of megafire.
","language":"English","publisher":"Elsevier","doi":"10.1016/j.gecco.2022.e02142","usgsCitation":"Parker, N., Sullins, D., Haukos, D.A., Fricke, K., and Hagen, C., 2024, Recovery of working grasslands following a megafire in the southern mixed-grass prairie: Global Ecology and Conservation, v. 36, e02142, 15 p., https://doi.org/10.1016/j.gecco.2022.e02142.","productDescription":"e02142, 15 p.","ipdsId":"IP-136300","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":441313,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.gecco.2022.e02142","text":"Publisher Index Page"},{"id":433320,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Kansas, Oklahoma","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -99.48507488919212,\n 37.46258659472579\n ],\n [\n -100.30527026898844,\n 37.46258659472579\n ],\n [\n -100.30527026898844,\n 36.83587876246861\n ],\n [\n -99.48507488919212,\n 36.83587876246861\n ],\n [\n -99.48507488919212,\n 37.46258659472579\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"36","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Parker, Nicholas J.","contributorId":341525,"corporation":false,"usgs":false,"family":"Parker","given":"Nicholas J.","affiliations":[{"id":12661,"text":"Kansas State University","active":true,"usgs":false}],"preferred":false,"id":908560,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sullins, Daniel S.","contributorId":341526,"corporation":false,"usgs":false,"family":"Sullins","given":"Daniel S.","affiliations":[{"id":12661,"text":"Kansas State University","active":true,"usgs":false}],"preferred":false,"id":908561,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Haukos, David A. 0000-0001-5372-9960 dhaukos@usgs.gov","orcid":"https://orcid.org/0000-0001-5372-9960","contributorId":3664,"corporation":false,"usgs":true,"family":"Haukos","given":"David","email":"dhaukos@usgs.gov","middleInitial":"A.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true},{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":908562,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Fricke, Kent A.","contributorId":341527,"corporation":false,"usgs":false,"family":"Fricke","given":"Kent A.","affiliations":[{"id":81167,"text":"Kansas Department of Wildlife and Parks","active":true,"usgs":false}],"preferred":false,"id":908563,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hagen, Christian A.","contributorId":341528,"corporation":false,"usgs":false,"family":"Hagen","given":"Christian A.","affiliations":[{"id":6680,"text":"Oregon State University","active":true,"usgs":false}],"preferred":false,"id":908564,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}} ,{"id":70256707,"text":"70256707 - 2024 - Paradigm versus paradox on the prairie: Testing competing stream fish movement frameworks using an imperiled Great Plains minnow","interactions":[],"lastModifiedDate":"2024-09-03T15:11:20.094795","indexId":"70256707","displayToPublicDate":"2022-02-22T10:02:45","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2792,"text":"Movement Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Paradigm versus paradox on the prairie: Testing competing stream fish movement frameworks using an imperiled Great Plains minnow","docAbstract":"Movement information can improve conservation of imperiled species, yet movement is not quantified for many organisms in need of conservation. Prairie chub (Macrhybopsis australis) is a regionally endemic freshwater fish with unquantified movement ecology and currently considered for listing under the Endangered Species Act. The purpose of this study was to test competing ecological theories for prairie chub movement, including the colonization cycle hypothesis (CCH) that posits adults must make upstream movements to compensate for downstream drift at early life stages, and the restricted movement paradigm (RMP) that describes populations as heterogeneous mixes of mostly stationary and few mobile fish.
We tagged prairie chub with visible implant elastomer during the summer (May–August) of 2019 and 2020 to estimate net distance moved (m) and movement rate (m/d). We tested the hypotheses that observed prairie chub movement would be greater than expected under the RMP and that prairie chub movement would be biased in an upstream direction as predicted by the CCH.
We tagged 5771 prairie chub and recaptured 213 individuals across 2019 and 2020. The stationary and mobile components of the prairie chub population moved an order of magnitude further and faster than expected under the RMP during both years. However, we found only limited evidence of upstream bias in adult prairie chub movement as would be expected under the CCH.
Our findings are partly inconsistent with the RMP and the CCH, and instead closely follow the drift paradox (DP), in which upstream populations persist despite presumed downstream drift during early life stages and in the apparent absence of upstream bias in recolonization. Previous mathematical solutions to the DP suggest organisms that experience drift maintain upstream populations through either minimization of drift periods such that small amounts of upstream movement are needed to counter the effects of advection or increasing dispersal regardless of directionality. We conclude that the resolution to the DP for prairie chub is an increase in total dispersal and our results provide insight into the spatial scales at which prairie chub conservation and management may need to operate to maintain broad-scale habitat connectivity.
","language":"English","publisher":"BMC","doi":"10.1186/s40462-022-00306-9","usgsCitation":"Steffensmeier, Z., Wedgeworth, M., Yancy, L., Santee, N., Brewer, S.K., and Perkin, J., 2024, Paradigm versus paradox on the prairie: Testing competing stream fish movement frameworks using an imperiled Great Plains minnow: Movement Ecology, v. 10, 8, 18 p., https://doi.org/10.1186/s40462-022-00306-9.","productDescription":"8, 18 p.","ipdsId":"IP-129827","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":441317,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1186/s40462-022-00306-9","text":"Publisher Index Page"},{"id":433406,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Oklahoma, Texas","otherGeospatial":"Upper Red River basin","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -99.53999110651326,\n 34.46203470581571\n ],\n [\n -99.53999110651326,\n 34.01411561470975\n ],\n [\n -98.91228898932087,\n 34.01411561470975\n ],\n [\n -98.91228898932087,\n 34.46203470581571\n ],\n [\n -99.53999110651326,\n 34.46203470581571\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"10","noUsgsAuthors":false,"publicationDate":"2022-02-22","publicationStatus":"PW","contributors":{"authors":[{"text":"Steffensmeier, Z.D.","contributorId":276153,"corporation":false,"usgs":false,"family":"Steffensmeier","given":"Z.D.","affiliations":[{"id":6747,"text":"Texas A&M University","active":true,"usgs":false}],"preferred":false,"id":908728,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wedgeworth, M.","contributorId":276151,"corporation":false,"usgs":false,"family":"Wedgeworth","given":"M.","affiliations":[{"id":7249,"text":"Oklahoma State University","active":true,"usgs":false}],"preferred":false,"id":908729,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Yancy, L.","contributorId":341639,"corporation":false,"usgs":false,"family":"Yancy","given":"L.","email":"","affiliations":[{"id":6747,"text":"Texas A&M University","active":true,"usgs":false}],"preferred":false,"id":908730,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Santee, N.","contributorId":341641,"corporation":false,"usgs":false,"family":"Santee","given":"N.","email":"","affiliations":[{"id":6747,"text":"Texas A&M University","active":true,"usgs":false}],"preferred":false,"id":908731,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Brewer, Shannon K. 0000-0002-1537-3921 skbrewer@usgs.gov","orcid":"https://orcid.org/0000-0002-1537-3921","contributorId":2252,"corporation":false,"usgs":true,"family":"Brewer","given":"Shannon","email":"skbrewer@usgs.gov","middleInitial":"K.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true},{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":908732,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Perkin, J.S.","contributorId":276147,"corporation":false,"usgs":false,"family":"Perkin","given":"J.S.","email":"","affiliations":[{"id":6747,"text":"Texas A&M University","active":true,"usgs":false}],"preferred":false,"id":908733,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}} ,{"id":70255090,"text":"70255090 - 2024 - Occurrence, abundance, movement, and habitat associations of Bonneville Cutthroat Trout in tributaries to Bear Lake, Idaho-Utah","interactions":[],"lastModifiedDate":"2024-06-12T22:33:57.342609","indexId":"70255090","displayToPublicDate":"2022-02-08T17:30:39","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"Occurrence, abundance, movement, and habitat associations of Bonneville Cutthroat Trout in tributaries to Bear Lake, Idaho-Utah","docAbstract":"Bonneville Cutthroat Trout (BCT) Oncorhynchus clarkii utah in Bear Lake, Idaho–Utah, is an important endemic and recreational species and plays a vital ecological role in systems throughout the basin. Although the distribution and abundance of BCT have declined due to anthropogenic disturbances, production of wild BCT in Bear Lake has increased over the past decade as a result of extensive habitat improvement in spawning tributaries. The objective of this study was to assess the occurrence, distribution, and out-migration of BCT in tributaries of Bear Lake. Surveys were conducted at 75 stream reaches across three study streams (i.e., St. Charles, Fish Haven, and Swan creeks) during 2019 and 2020. A total of 1,064 BCT was sampled from 55 of 75 total reaches (73%). Total length of BCT varied from 22 to 650 mm, and the average TL was 117 mm (SE = 2.2). Regression models were used to identify abiotic and biotic features associated with BCT distribution, abundance, and probability of out-migration. Regardless of the tributary, elevation was negatively related to BCT occurrence and relative abundance. Other habitat characteristics associated with the presence and abundance of BCT were similar to those of other Cutthroat Trout species. For example, BCT were often associated with large substrates, instream cover, canopy cover, and heterogeneity in several habitat characteristics. The probability of a BCT out-migrating was positively associated with fish length and age but negatively related to distance to Bear Lake and number of downstream irrigation diversions. Results from this study provide critical information on the ecology and early life history characteristics of BCT that can be used to guide additional conservation and management efforts (i.e., removal of nonnative fish species; continued habitat restoration efforts).
","language":"English","publisher":"American Fisheries Society","doi":"10.1002/nafm.10754","usgsCitation":"Heller, M., Dillon, J., and Quist, M.C., 2024, Occurrence, abundance, movement, and habitat associations of Bonneville Cutthroat Trout in tributaries to Bear Lake, Idaho-Utah: North American Journal of Fisheries Management, v. 42, no. 3, p. 684-700, https://doi.org/10.1002/nafm.10754.","productDescription":"17 p.","startPage":"684","endPage":"700","ipdsId":"IP-130593","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":430044,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Idaho, Utah","otherGeospatial":"Bear Lake","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -111.43188970410537,\n 42.20225725843633\n ],\n [\n -111.43188970410537,\n 41.82810660832243\n ],\n [\n -111.2373990493141,\n 41.82810660832243\n ],\n [\n -111.2373990493141,\n 42.20225725843633\n ],\n [\n -111.43188970410537,\n 42.20225725843633\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"42","issue":"3","noUsgsAuthors":false,"publicationDate":"2022-02-08","publicationStatus":"PW","contributors":{"authors":[{"text":"Heller, Megan","contributorId":338594,"corporation":false,"usgs":false,"family":"Heller","given":"Megan","email":"","affiliations":[{"id":36394,"text":"University of Idaho","active":true,"usgs":false}],"preferred":false,"id":903380,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dillon, Jeff","contributorId":337718,"corporation":false,"usgs":false,"family":"Dillon","given":"Jeff","email":"","affiliations":[{"id":36224,"text":"Idaho Department of Fish and Game","active":true,"usgs":false}],"preferred":false,"id":903381,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Quist, Michael C. 0000-0001-8268-1839","orcid":"https://orcid.org/0000-0001-8268-1839","contributorId":207142,"corporation":false,"usgs":true,"family":"Quist","given":"Michael","middleInitial":"C.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":903382,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}} ,{"id":70256729,"text":"70256729 - 2024 - Habitat selection in a southern Lake Sturgeon population: Implications of temporal, spatial, and ontogenetic variation for restoration","interactions":[],"lastModifiedDate":"2024-09-03T16:54:10.020352","indexId":"70256729","displayToPublicDate":"2021-11-05T11:50:12","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3271,"text":"Restoration Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Habitat selection in a southern Lake Sturgeon population: Implications of temporal, spatial, and ontogenetic variation for restoration","docAbstract":"Successful species reintroduction requires restoration of receiving habitats to support growth, survival, and reproduction that reverse the initial causes of decline. Little is known about whether present habitat conditions can support all life stages of reintroduced southern Lake Sturgeon populations that were possibly extirpated by the mid-1900s due to overharvest and habitat degradation. Therefore, we conducted a telemetry study to assess annual adult and subadult and overwinter age-0 Lake Sturgeon habitat selection and suitability in two Missouri River U.S. tributaries near the southern edge of the species range. Spring habitat selection models were unable to define spawning habitat criteria, but criteria from other studies suggest that substrate and depths for spawning are suitable in both rivers. In the summer and winter, adult and subadult Lake Sturgeon exhibited strong selection for pools greater than 8 m deep, which comprised less than 5% of our study streams. Habitat selection in the fall and winter by age-0 Lake Sturgeon differed from adults with age-0s selecting shallower habitats both rivers and swifter current velocities in the Gasconade River. General habitat patterns persisted for both life stages in each river regardless of habitat availability, suggesting specialized habitat requirements in southern Lake Sturgeon that differ from previously studied populations further north. These results may be used to direct sampling for validation of reproduction and restoration of not only spawning habitats, but age-0 and summer and winter refugia that may be potential restoration bottlenecks for southern Lake Sturgeon populations.
","language":"English","publisher":"Wiley","doi":"10.1111/rec.13602","usgsCitation":"Moore, M., Paukert, C.P., Owens, S., and Moore, T., 2024, Habitat selection in a southern Lake Sturgeon population: Implications of temporal, spatial, and ontogenetic variation for restoration: Restoration Ecology, v. 30, no. 7, e13602, 15 p., https://doi.org/10.1111/rec.13602.","productDescription":"e13602, 15 p.","ipdsId":"IP-130802","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":433417,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Missouri","otherGeospatial":"Gasconade River, Osage River","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -94.76822559173715,\n 40.12199149318826\n ],\n [\n -94.76822559173715,\n 36.2622290687403\n ],\n [\n -89.55006706959847,\n 36.2622290687403\n ],\n [\n -89.55006706959847,\n 40.12199149318826\n ],\n [\n -94.76822559173715,\n 40.12199149318826\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"30","issue":"7","noUsgsAuthors":false,"publicationDate":"2021-12-20","publicationStatus":"PW","contributors":{"authors":[{"text":"Moore, M.J.","contributorId":341714,"corporation":false,"usgs":false,"family":"Moore","given":"M.J.","affiliations":[{"id":6754,"text":"University of Missouri","active":true,"usgs":false}],"preferred":false,"id":908800,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Paukert, Craig P. 0000-0002-9369-8545","orcid":"https://orcid.org/0000-0002-9369-8545","contributorId":245524,"corporation":false,"usgs":true,"family":"Paukert","given":"Craig","middleInitial":"P.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":908801,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Owens, S.","contributorId":341715,"corporation":false,"usgs":false,"family":"Owens","given":"S.","email":"","affiliations":[{"id":81779,"text":"University of Illinois Springfield","active":true,"usgs":false}],"preferred":false,"id":908802,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Moore, T.","contributorId":257287,"corporation":false,"usgs":false,"family":"Moore","given":"T.","affiliations":[],"preferred":false,"id":908803,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}} ,{"id":70261887,"text":"70261887 - 2024 - A latest Pleistocene and Holocene composite tephrostratigraphic framework for northeastern North America","interactions":[],"lastModifiedDate":"2024-12-31T16:08:38.559478","indexId":"70261887","displayToPublicDate":"2021-11-01T00:00:00","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3219,"text":"Quaternary Science Reviews","active":true,"publicationSubtype":{"id":10}},"title":"A latest Pleistocene and Holocene composite tephrostratigraphic framework for northeastern North America","docAbstract":"Lakes and bogs in northeastern North America preserve tephra deposits sourced from multiple volcanic systems in the Northern Hemisphere. However, most studies of these deposits focus on specific Holocene intervals and the latest Pleistocene, providing snapshots rather than a full picture. We combine new data with previous work, supplemented by a broad review of the characteristics and ages of potential source regions and volcanoes, to develop the first composite tephrostratigraphic framework covering the last ~14,000 years for this region. We report new cryptotephra records from three ombrotrophic peat bogs—Irwin Smith (Michigan), Bloomingdale (New York), and Sidney Bog (Maine)—as well as new analyses and age models from previously reported sites, Nordan’s Pond Bog (Newfoundland) and Thin-Ice Pond (Nova Scotia). A new tephra (Iliinsky) from the NGRIP and GRIP ice cores is also presented as it can be correlated to new data from these terrestrial records and helps validate radiocarbon age models. We identify 21 new tephra in addition to the 15 already known, several of which cover the entire region – the White River Ash east, Newberry Pumice, Ruppert (NDN230), and Mazama. For the first time we find Mount St. Helens Yn (ca. 3660 cal yr BP) and a set P tephra (~3000–2550 cal yr BP), and confirm the presence of Jala Pumice from Volcan Ceboruco, Mexico, and KS1 from Ksudach volcano, Kamchatka. We describe new “ultra-distal” tephra, including the early Holocene KS2 eruption, and propose correlations to volcanoes Iliinsky and Shiveluch of Kamchatka, and Ushishir of the Kurile Islands. Not all of these tephra represent large eruptions, with several plausible correlations to sub-Plinian events. Using Bayesian age-modeling, we present new age estimates for the newly described tephra, for tephra with previously poor age control, and for several proximal correlatives. Overall, we demonstrate northeastern North America’s importance for providing transcontinental linkages between paleoenvironmental records and providing insights into ash distribution from different styles and sizes of eruptions.
","language":"English","publisher":"Elsevier","doi":"10.1016/j.quascirev.2021.107242","usgsCitation":"Jensen, B.J., Davies, L.J., Nolan, C.J., Pyne-O’Donnell, S., Monteath, A., Ponomareva, V., Portnyagin, M., Booth, R.K., Bursik, M., Cook, E., Plunkett, G., Vallance, J.W., Luo, Y., Cwynar, L., Hughes, P., and Pearson, D., 2024, A latest Pleistocene and Holocene composite tephrostratigraphic framework for northeastern North America: Quaternary Science Reviews, v. 272, 107242, 31 p., https://doi.org/10.1016/j.quascirev.2021.107242.","productDescription":"107242, 31 p.","ipdsId":"IP-133544","costCenters":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":467060,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.quascirev.2021.107242","text":"Publisher Index Page"},{"id":465569,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada, United States","otherGeospatial":"northeastern North America","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -86.70710190314398,\n 45.89875407338073\n ],\n [\n -87.25715165097691,\n 41.88494584293869\n ],\n [\n -70.39038584514105,\n 42.568403377972174\n ],\n [\n -61.02421079487245,\n 44.282776992445974\n ],\n [\n -51.839625858910196,\n 47.329526024513775\n ],\n [\n -51.90792307454112,\n 48.349799922260345\n ],\n [\n -54.77047158421425,\n 51.839642161004456\n ],\n [\n -65.24334883460824,\n 49.434251662776575\n ],\n [\n -86.70710190314398,\n 45.89875407338073\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"272","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Jensen, Britta J.L. 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University","active":true,"usgs":false}],"preferred":false,"id":922154,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Plunkett, Gill 0000-0003-1014-3454","orcid":"https://orcid.org/0000-0003-1014-3454","contributorId":288522,"corporation":false,"usgs":false,"family":"Plunkett","given":"Gill","email":"","affiliations":[{"id":61787,"text":"Queen’s University Belfast","active":true,"usgs":false}],"preferred":false,"id":922155,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Vallance, James W. 0000-0002-3083-5469 jvallance@usgs.gov","orcid":"https://orcid.org/0000-0002-3083-5469","contributorId":547,"corporation":false,"usgs":true,"family":"Vallance","given":"James","email":"jvallance@usgs.gov","middleInitial":"W.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":922156,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Luo, Yantao","contributorId":204972,"corporation":false,"usgs":false,"family":"Luo","given":"Yantao","email":"","affiliations":[{"id":37017,"text":"College of Mathematics and System Sciences, Xinjiang University","active":true,"usgs":false}],"preferred":false,"id":922157,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Cwynar, Les C. 0000-0002-4415-6352","orcid":"https://orcid.org/0000-0002-4415-6352","contributorId":347678,"corporation":false,"usgs":false,"family":"Cwynar","given":"Les C.","affiliations":[{"id":83204,"text":"Department of Biology, University of New Brunswick, Fredericton, Canada","active":true,"usgs":false}],"preferred":false,"id":922158,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Hughes, Paul","contributorId":220209,"corporation":false,"usgs":false,"family":"Hughes","given":"Paul","email":"","affiliations":[{"id":40153,"text":"University of South Hampton, UK","active":true,"usgs":false}],"preferred":false,"id":922159,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Pearson, D. Graham","contributorId":347679,"corporation":false,"usgs":false,"family":"Pearson","given":"D. Graham","affiliations":[{"id":83205,"text":"Department of Earth and Atmospheric Sciences, University of Alberta, Canada","active":true,"usgs":false}],"preferred":false,"id":922160,"contributorType":{"id":1,"text":"Authors"},"rank":16}]}} ,{"id":70261208,"text":"70261208 - 2024 - Mapping and classification of volcanic deposits using multi-sensor unoccupied aerial systems","interactions":[],"lastModifiedDate":"2024-11-29T15:29:11.814371","indexId":"70261208","displayToPublicDate":"2021-10-01T00:00:00","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3254,"text":"Remote Sensing of Environment","printIssn":"0034-4257","active":true,"publicationSubtype":{"id":10}},"title":"Mapping and classification of volcanic deposits using multi-sensor unoccupied aerial systems","docAbstract":"The deposits from volcanic eruptions represent the record of activity at a volcano. Identification, classification, and interpretation of these deposits are crucial to the understanding of volcanic processes and assessing hazards. However, deposits often cover large areas and can be difficult or dangerous to access, making field mapping dangerous and time-consuming. Remote sensing techniques are often used to map and identify the deposits of volcanic eruptions, though these techniques present their own trade-offs in terms of image resolution, wavelength, and observation frequency. Here, we present a new approach for mapping and classifying volcanic deposits using a multi-sensor unoccupied aerial system (UAS), and demonstrate its application on lava and tephra deposits associated with the 2018 eruption of Sierra Negra volcano (Galápagos Archipelago, Ecuador). We surveyed the study area and collected visible and thermal infrared (TIR) images. We used structure-from-motion photogrammetry to create a digital elevation model (DEM) from the visual images and calculated the solar heating rate of the surface from temperature maps based on the TIR images. We find that the solar heating rate is highest for tephra deposits and lowest for ʻaʻā lava, with pāhoehoe lava having intermediate values. This is consistent with the solar heating rate correlating to the density and particle size of the surface. The solar heating rate for the lava flow also decreases with increasing distance from the vent, consistent with an increase in density as the lava degasses. We combined the surface roughness (calculated from the DEM) and the solar heating rate of the surface to remotely classify tephra deposits and different lava morphologies. We applied both supervised and unsupervised machine learning algorithms and demonstrate that supervised methods can replicate the manual classification while the unsupervised method can identify major surface units with no ground truth information. These methods allow for remote mapping and classification at high spatial resolution (< 1 meter) of a variety of volcanic deposits, with potential for application to deposits from other processes (e.g., fluvial, glacial) and deposits on other planetary bodies.","language":"English","publisher":"Elsevier","doi":"10.1016/j.rse.2021.112581","usgsCitation":"Carr, B.B., Lev, E., Sawi, T., Bennett, K.A., Edwards, C., Soule, S.A., Vallejo Vargas, S., and Marliyani, G.I., 2024, Mapping and classification of volcanic deposits using multi-sensor unoccupied aerial systems: Remote Sensing of Environment, v. 264, 112581, 19 p., https://doi.org/10.1016/j.rse.2021.112581.","productDescription":"112581, 19 p.","ipdsId":"IP-120876","costCenters":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":467061,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.rse.2021.112581","text":"Publisher Index Page"},{"id":464592,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Ecuador","otherGeospatial":"Galápagos Archipelago, Sierra Negra volcano","geographicExtents":"{\n \"type\": \"FeatureCollection\",\n \"features\": [\n {\n \"type\": \"Feature\",\n \"properties\": {},\n \"geometry\": {\n \"coordinates\": [\n [\n [\n -91.2511100637289,\n -0.5953009426430782\n ],\n [\n -91.2511100637289,\n -0.8970296668221494\n ],\n [\n -91.0263665395592,\n -0.8970296668221494\n ],\n [\n -91.0263665395592,\n -0.5953009426430782\n ],\n [\n -91.2511100637289,\n -0.5953009426430782\n ]\n ]\n ],\n \"type\": \"Polygon\"\n }\n }\n ]\n}","volume":"264","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Carr, Brett B. 0000-0002-1033-3082","orcid":"https://orcid.org/0000-0002-1033-3082","contributorId":305984,"corporation":false,"usgs":true,"family":"Carr","given":"Brett","email":"","middleInitial":"B.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":919860,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lev, Einat 0000-0002-8174-0558","orcid":"https://orcid.org/0000-0002-8174-0558","contributorId":194355,"corporation":false,"usgs":false,"family":"Lev","given":"Einat","email":"","affiliations":[{"id":27369,"text":"Lamont-Doherty Earth Observatory at Columbia University","active":true,"usgs":false}],"preferred":false,"id":919861,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sawi, Theresa","contributorId":346761,"corporation":false,"usgs":false,"family":"Sawi","given":"Theresa","email":"","affiliations":[{"id":82958,"text":"Lamont-Doherty Earth Observatory, Columbia University, Palisades, NY","active":true,"usgs":false}],"preferred":false,"id":919862,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Bennett, Kristen A. 0000-0001-8105-7129","orcid":"https://orcid.org/0000-0001-8105-7129","contributorId":237068,"corporation":false,"usgs":true,"family":"Bennett","given":"Kristen","email":"","middleInitial":"A.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":919863,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Edwards, Christopher S.","contributorId":206168,"corporation":false,"usgs":false,"family":"Edwards","given":"Christopher S.","affiliations":[{"id":7202,"text":"NAU","active":true,"usgs":false}],"preferred":false,"id":919864,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Soule, S. 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