{"pageNumber":"430","pageRowStart":"10725","pageSize":"25","recordCount":184579,"records":[{"id":70229804,"text":"70229804 - 2022 - The tundra phenology database: More than two decades of tundra phenology responses to climate change","interactions":[],"lastModifiedDate":"2022-10-31T14:11:15.868554","indexId":"70229804","displayToPublicDate":"2021-05-11T09:53:07","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5363,"text":"Arctic Science","active":true,"publicationSubtype":{"id":10}},"title":"The tundra phenology database: More than two decades of tundra phenology responses to climate change","docAbstract":"<p><span>Observations of changes in phenology have provided some of the strongest signals of the effects of climate change on terrestrial ecosystems. The International Tundra Experiment (ITEX), initiated in the early 1990s, established a common protocol to measure plant phenology in tundra study areas across the globe. Today, this valuable collection of phenology measurements depicts the responses of plants at the colder extremes of our planet to experimental and ambient changes in temperature over the past decades. The database contains 150&nbsp;434 phenology observations of 278 plant species taken at 28 study areas for periods of 1–26 years. Here we describe the full data set to increase the visibility and use of these data in global analyses and to invite phenology data contributions from underrepresented tundra locations. Portions of this tundra phenology database have been used in three recent syntheses, some data sets are expanded, others are from entirely new study areas, and the entirety of these data are now available at the Polar Data Catalogue (</span><a href=\"https://doi.org/10.21963/13215\" data-mce-href=\"https://doi.org/10.21963/13215\">https://doi.org/10.21963/13215</a><span>).</span></p>","language":"English","publisher":"Canadian Science Publishing","doi":"10.1139/as-2020-0041","usgsCitation":"Prevey, J.S., Elmendorf, S.C., Bjorkman, A., Alatalo, J., Ashton, I., Assmann, J.J., Bjork, R.G., Bjorkman, M.P., Cannone, N., Carbognani, M., Chisholm, C., Clark, K., Collins, C.G., Cooper, E.J., Elberling, B., Frei, E.R., Henry, G., Hollister, R.D., Hoye, T.T., Jonsdottir, I.S., Kerby, J.T., Klanderud, K., Kopp, C., Levesque, E., Mauritz, M., Molau, U., Myers-Smith, I.H., Natali, S., Oberbauer, S.F., Panchen, Z., Petraglia, A., Post, E., Rixen, C., Rodenhizer, H., Rumpf, S.B., Schmidt, N.M., Schuur, T., Semenchuk, P.R., Smith, J.G., Suding, K., Totland, Ø., Troxler, T.G., Wahren, H., Welker, J.M., Wipf, S., and Yang, Y., 2022, The tundra phenology database: More than two decades of tundra phenology responses to climate change: Arctic Science, v. 8, no. 3, p. 1026-1039, https://doi.org/10.1139/as-2020-0041.","productDescription":"14 p.","startPage":"1026","endPage":"1039","ipdsId":"IP-123068","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":449819,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1139/as-2020-0041","text":"Publisher Index Page"},{"id":397238,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"8","issue":"3","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Prevey, Janet S. 0000-0003-2879-6453","orcid":"https://orcid.org/0000-0003-2879-6453","contributorId":222702,"corporation":false,"usgs":true,"family":"Prevey","given":"Janet","email":"","middleInitial":"S.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":838318,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Elmendorf, Sarah Claire","contributorId":260910,"corporation":false,"usgs":false,"family":"Elmendorf","given":"Sarah","email":"","middleInitial":"Claire","affiliations":[{"id":52709,"text":"University of Colorado, Boulder CO 80309-0450","active":true,"usgs":false}],"preferred":false,"id":838319,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bjorkman, Anne 0000-0003-2174-7800","orcid":"https://orcid.org/0000-0003-2174-7800","contributorId":260911,"corporation":false,"usgs":false,"family":"Bjorkman","given":"Anne","email":"","affiliations":[{"id":52710,"text":"(1) Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden (2) Gothenburg Global Biodiversity Centre, Gothenburg, Sweden","active":true,"usgs":false}],"preferred":false,"id":838320,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Alatalo, J. 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,{"id":70223759,"text":"70223759 - 2022 - A graphical causal model for resolving species identity effects and biodiversity–ecosystem function correlations: comment","interactions":[],"lastModifiedDate":"2022-02-15T15:36:21.539096","indexId":"70223759","displayToPublicDate":"2021-05-03T08:43:34","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1465,"text":"Ecology","active":true,"publicationSubtype":{"id":10}},"title":"A graphical causal model for resolving species identity effects and biodiversity–ecosystem function correlations: comment","docAbstract":"<p><span>In a recent paper, Schoolmaster, Zirbel, and Cronin (SZC) (2020</span><span></span><span>) claim “Formal causal analysis show[s] that biodiversity–ecosystem function (BEF) correlations are non-causal associations.” If this conclusion is accepted as true, it suggests a reconsideration of much of our current understanding of how biodiversity relates to the functioning of ecosystems. On the surface, it is easy to spot clear signs of something problematic with SZC’s presentation. They claim, for example, that (1) species richness is incapable of having a causal effect on ecosystem functioning on theoretical grounds, and (2) that trait diversity cannot be causally influenced by species diversity. These remarkable claims are counter to existing thought and evidence. We point to logical errors that lead them to a misapply causal analysis and produce erroneous conclusions.</span></p>","language":"English","publisher":"John Wiley & Sons","doi":"10.1002/ecy.3378","usgsCitation":"Grace, J.B., Loreau, M., and Schmid, B., 2022, A graphical causal model for resolving species identity effects and biodiversity–ecosystem function correlations: comment: Ecology, v. 103, no. 2, e03378, https://doi.org/10.1002/ecy.3378.","productDescription":"e03378","ipdsId":"IP-118978","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":488956,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"text":"External Repository"},{"id":388863,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"103","issue":"2","noUsgsAuthors":false,"publicationDate":"2021-06-03","publicationStatus":"PW","contributors":{"editors":[{"text":"Inouye, Brian D.","contributorId":95409,"corporation":false,"usgs":true,"family":"Inouye","given":"Brian","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":822558,"contributorType":{"id":2,"text":"Editors"},"rank":1}],"authors":[{"text":"Grace, James B. 0000-0001-6374-4726 gracej@usgs.gov","orcid":"https://orcid.org/0000-0001-6374-4726","contributorId":884,"corporation":false,"usgs":true,"family":"Grace","given":"James","email":"gracej@usgs.gov","middleInitial":"B.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":455,"text":"National Wetlands Research Center","active":true,"usgs":true},{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":822554,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Loreau, Michel","contributorId":17464,"corporation":false,"usgs":false,"family":"Loreau","given":"Michel","email":"","affiliations":[{"id":48706,"text":"Theoretical and Experimental Ecology Station (UMR 5371), National Centre for Scientific Research (CNRS), Paul Sabatier University (UPS), Moulis, France","active":true,"usgs":false}],"preferred":false,"id":822557,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Schmid, Bernhard","contributorId":265329,"corporation":false,"usgs":false,"family":"Schmid","given":"Bernhard","affiliations":[{"id":54647,"text":"Department of Geography, Remote Sensing Laboratories, University of Zurich","active":true,"usgs":false}],"preferred":false,"id":822555,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70220305,"text":"70220305 - 2022 - The precarious position of wildlife conservation funding in the United States","interactions":[],"lastModifiedDate":"2022-03-15T15:53:19.210902","indexId":"70220305","displayToPublicDate":"2021-05-02T07:15:57","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1909,"text":"Human Dimensions of Wildlife","active":true,"publicationSubtype":{"id":10}},"title":"The precarious position of wildlife conservation funding in the United States","docAbstract":"<div class=\"hlFld-Abstract test\"><div class=\"abstractSection abstractInFull\"><p>The Pittman-Robertson Act was established in 1937 to fund state-based wildlife conservation through an existing excise tax on sporting arms and ammunition. Because these items were purchased mostly by hunters at the time, they were the user group primarily funding wildlife conservation. Subsequent amendments to Pittman-Robertson expanded the taxable items to include pistols, revolvers, and archery equipment, effectively broadening the pool of conservation funding contributors to include non-hunters. The continuing trends of declining hunting participation, increasing handgun sales for non-hunting purposes, and increasing sport shooting and target archery independent of hunting, mean that non-hunters are contributing a disproportionately greater amount to Pittman-Robertson funding than hunters, and therefore contributing more to wildlife conservation. The evolving sources of revenue to Pittman-Robertson pose several threats to this historically important source of conservation funding. Addressing them may require new funding coalitions and outreach describing the conservation benefits and outcomes of Pittman-Robertson funding.</p></div></div>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/10871209.2021.1904307","usgsCitation":"Duda, M.D., Beppler, T., Austen, D.S., and Organ, J.F., 2022, The precarious position of wildlife conservation funding in the United States: Human Dimensions of Wildlife, v. 27, no. 2, p. 164-172, https://doi.org/10.1080/10871209.2021.1904307.","productDescription":"9 p.","startPage":"164","endPage":"172","ipdsId":"IP-123557","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":385447,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"geometry\": {\n        \"type\": \"MultiPolygon\",\n 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Tom","contributorId":189049,"corporation":false,"usgs":false,"family":"Beppler","given":"Tom","email":"","affiliations":[],"preferred":false,"id":815083,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Austen, Douglas S.","contributorId":257818,"corporation":false,"usgs":false,"family":"Austen","given":"Douglas","email":"","middleInitial":"S.","affiliations":[{"id":52129,"text":"American Fisheries Society","active":true,"usgs":false}],"preferred":false,"id":815084,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Organ, John F. 0000-0002-0959-0639 jorgan@usgs.gov","orcid":"https://orcid.org/0000-0002-0959-0639","contributorId":189047,"corporation":false,"usgs":true,"family":"Organ","given":"John","email":"jorgan@usgs.gov","middleInitial":"F.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":815085,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70228986,"text":"70228986 - 2022 - Factors influencing the use of water-filled tree cavities by eastern ratsnakes (Pantherophis alleghaniensis)","interactions":[],"lastModifiedDate":"2022-02-25T16:16:53.447115","indexId":"70228986","displayToPublicDate":"2021-04-30T10:11:49","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1894,"text":"Herpetological Conservation and Biology","onlineIssn":"2151-0733","printIssn":"1931-7603","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Factors influencing the use of water-filled tree cavities by eastern ratsnakes (<i>Pantherophis alleghaniensis</i>)","title":"Factors influencing the use of water-filled tree cavities by eastern ratsnakes (Pantherophis alleghaniensis)","docAbstract":"<p>For some animals, specific microhabitats may be particularly important for certain behaviors and/or age or sex classes. Here we explore the use of previously unrecognized retreat sites (water-filled tree cavities) by Eastern Ratsnakes (<i>Pantherophis alleghaniensis</i>). During 4 y of radio telemetry, approximately half of the 45 ratsnakes monitored used water-filled cavities. Typically, water-filled cavities (phytotelmata) were in live Laurel Oaks (<i>Quercus laurifolia</i>) and Black Cherry (<i>Prunus serotina</i>) where limbs had broken off, internal wood had rotted, and water accumulated. Water-filled cavities were used by ratsnakes at about the same frequency as tree stumps but less frequently than snags, brushpiles, or downed logs. Snakes remained in water-filled cavities for an average of 10 d compared to only 2–4 d in other structures. Reproductive females (both pre- and post-egg laying) were four times more likely to use water-filled cavities than non-gravid or male ratsnakes, suggesting cavities are used to offset water loss associated with gestation. Ratsnakes used water-filled cavities far more in summer than spring even though thermal profiles of cavities were similar to those of other retreat structures, indicating their use was not for thermoregulation. Multiple snakes often used cavities simultaneously, suggesting that cavities are either limited or facilitate social interaction. Snakes did not use artificial water-filled cavities, suggesting that natural sites may provide snakes with some unknown benefit beyond hydration. Water-filled cavities appear to be important for ratsnakes, particularly reproductive females, and warrant further investigation.</p>","language":"English","publisher":"Herpetological Conservation and Biology","usgsCitation":"DeGregorio, B.A., Sperry, J.H., and Weatherhead, P.J., 2022, Factors influencing the use of water-filled tree cavities by eastern ratsnakes (Pantherophis alleghaniensis): Herpetological Conservation and Biology, v. 16, no. 1, p. 173-182.","productDescription":"10 p.","startPage":"173","endPage":"182","ipdsId":"IP-119935","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":396493,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":396492,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.herpconbio.org/contents_vol16_issue1.html"}],"country":"United States","state":"South Carolina","county":"Aiken County","otherGeospatial":"Savannah River Site","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -81.59957885742188,\n              33.09384260312052\n            ],\n            [\n              -81.441650390625,\n              33.21226543987183\n            ],\n            [\n              -81.47048950195312,\n              33.377559143878244\n            ],\n            [\n              -81.5789794921875,\n              33.417687357334934\n            ],\n            [\n              -81.70669555664062,\n              33.402784755472396\n            ],\n            [\n              -81.80419921875,\n              33.33741240611175\n            ],\n            [\n              -81.84127807617188,\n              33.23409295522519\n            ],\n            [\n              -81.70944213867186,\n              33.116849834921005\n            ],\n            [\n              -81.59957885742188,\n              33.09384260312052\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"16","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"DeGregorio, Brett Alexander 0000-0002-5273-049X","orcid":"https://orcid.org/0000-0002-5273-049X","contributorId":243214,"corporation":false,"usgs":true,"family":"DeGregorio","given":"Brett","email":"","middleInitial":"Alexander","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":836081,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sperry, J. H.","contributorId":279699,"corporation":false,"usgs":false,"family":"Sperry","given":"J.","email":"","middleInitial":"H.","affiliations":[{"id":36403,"text":"University of Illinois","active":true,"usgs":false}],"preferred":false,"id":836082,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Weatherhead, P. J.","contributorId":280177,"corporation":false,"usgs":false,"family":"Weatherhead","given":"P.","email":"","middleInitial":"J.","affiliations":[{"id":36403,"text":"University of Illinois","active":true,"usgs":false}],"preferred":false,"id":836083,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70228997,"text":"70228997 - 2022 - Cognitive and behavioral coping in response to wildlife disease: The case of hunters and chronic wasting disease","interactions":[],"lastModifiedDate":"2022-05-13T14:45:39.989544","indexId":"70228997","displayToPublicDate":"2021-04-30T09:45:22","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1909,"text":"Human Dimensions of Wildlife","active":true,"publicationSubtype":{"id":10}},"title":"Cognitive and behavioral coping in response to wildlife disease: The case of hunters and chronic wasting disease","docAbstract":"<p><span>The transactional model of stress and coping (TMSC) provides a conceptual framework for understanding adaptations to stressors like chronic wasting disease (CWD). Understanding hunter response to stressors is important because decreased participation and satisfaction can affect individual well-being, cultural traditions, agency revenue, and local economies. Using TMSC, we explored how deer hunters coped with CWD. We also compared involvement, and impacts and emotions related to CWD, inside and outside a CWD management zone. Then we examined coping related to CWD presence, and if the disease affected human health. Most hunters would cope using product shift (i.e., eating meat after a negative test result) rather than displacement (i.e., hunting elsewhere) or dropout. Hunters who may be displaced reported lower involvement in deer hunting, and increased worry about CWD. Results suggest that CWD information and testing may increase hunter worry. Funding expanded testing without prompting displacement or dropout are important management considerations.</span></p>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/10871209.2021.1919340","usgsCitation":"Schroeder, S., Landon, A., Cornicelli, L., Fulton, D.C., and McInenly, L., 2022, Cognitive and behavioral coping in response to wildlife disease: The case of hunters and chronic wasting disease: Human Dimensions of Wildlife, v. 27, no. 3, p. 251-272, https://doi.org/10.1080/10871209.2021.1919340.","productDescription":"22 p.","startPage":"251","endPage":"272","ipdsId":"IP-119986","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":396488,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Minnesota","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -91.2030029296875,\n              43.52465500687185\n            ],\n            [\n              -91.23046875,\n              43.84245116699039\n            ],\n            [\n              -91.60400390625,\n              44.09547572946637\n            ],\n            [\n              -92.0379638671875,\n              44.41808794374846\n            ],\n            [\n              -92.3016357421875,\n              44.512176171071054\n            ],\n            [\n              -92.7740478515625,\n              44.75453548416007\n            ],\n            [\n              -92.8509521484375,\n              44.81691551782855\n            ],\n            [\n              -93.1146240234375,\n              44.933696389694674\n            ],\n            [\n              -93.1365966796875,\n              45.19752230305682\n            ],\n            [\n              -93.636474609375,\n              45.16267407976458\n            ],\n            [\n              -93.515625,\n              44.735027899515465\n            ],\n            [\n              -93.0322265625,\n              44.69989765840318\n            ],\n            [\n              -92.74658203125,\n              44.19795903948531\n            ],\n            [\n              -92.3785400390625,\n              43.667871610117494\n            ],\n            [\n              -92.318115234375,\n              43.50872101129684\n            ],\n            [\n              -91.2030029296875,\n              43.52465500687185\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"27","issue":"3","noUsgsAuthors":false,"publicationDate":"2021-04-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Schroeder, Susan A.","contributorId":280190,"corporation":false,"usgs":false,"family":"Schroeder","given":"Susan A.","affiliations":[{"id":6626,"text":"University of Minnesota","active":true,"usgs":false}],"preferred":false,"id":836094,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Landon, Adam","contributorId":280191,"corporation":false,"usgs":false,"family":"Landon","given":"Adam","affiliations":[{"id":34923,"text":"Minnesota DNR","active":true,"usgs":false}],"preferred":false,"id":836095,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Cornicelli, Louis J.","contributorId":280192,"corporation":false,"usgs":false,"family":"Cornicelli","given":"Louis J.","affiliations":[{"id":34923,"text":"Minnesota DNR","active":true,"usgs":false}],"preferred":false,"id":836096,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Fulton, David C. 0000-0001-5763-7887 dcf@usgs.gov","orcid":"https://orcid.org/0000-0001-5763-7887","contributorId":2208,"corporation":false,"usgs":true,"family":"Fulton","given":"David","email":"dcf@usgs.gov","middleInitial":"C.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":836093,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"McInenly, Leslie","contributorId":280193,"corporation":false,"usgs":false,"family":"McInenly","given":"Leslie","affiliations":[{"id":34923,"text":"Minnesota DNR","active":true,"usgs":false}],"preferred":false,"id":836097,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70229209,"text":"70229209 - 2022 - A novel framework to predict relative habitat selection in aquatic systems: Applying machine learning and resource selection functions to acoustic telemetry data from multiple shark species","interactions":[],"lastModifiedDate":"2022-03-03T17:09:47.686507","indexId":"70229209","displayToPublicDate":"2021-04-29T11:04:27","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3912,"text":"Frontiers in Marine Science","onlineIssn":"2296-7745","active":true,"publicationSubtype":{"id":10}},"title":"A novel framework to predict relative habitat selection in aquatic systems: Applying machine learning and resource selection functions to acoustic telemetry data from multiple shark species","docAbstract":"<p><span>Resource selection functions (RSFs) have been widely applied to animal tracking data to examine relative habitat selection and to help guide management and conservation strategies. While readily used in terrestrial ecology, RSFs have yet to be extensively used within marine systems. As acoustic telemetry continues to be a pervasive approach within marine environments, incorporation of RSFs can provide new insights to help prioritize habitat protection and restoration to meet conservation goals. To overcome statistical hurdles and achieve high prediction accuracy, machine learning algorithms could be paired with RSFs to predict relative habitat selection for a species within and even outside the monitoring range of acoustic receiver arrays, making this a valuable tool for marine ecologists and resource managers. Here, we apply RSFs using machine learning to an acoustic telemetry dataset of four shark species to explore and predict species-specific habitat selection within a marine protected area. In addition, we also apply this RSF-machine learning approach to investigate predator-prey relationships by comparing and averaging tiger shark relative selection values with the relative selection values derived for eight potential prey-species. We provide methodological considerations along with a framework and flexible approach to apply RSFs with machine learning algorithms to acoustic telemetry data and suggest marine ecologists and resource managers consider adopting such tools to help guide both conservation and management strategies.</span></p>","language":"English","publisher":"Frontiers Media","doi":"10.3389/fmars.2021.631262","usgsCitation":"Griffin, L.P., Casselberry, G.A., Hart, K., Jordaan, A., Becker, S.L., Novak, A.J., DeAngelis, B.M., Pollock, C.G., Lundgren, I., Hillis-Starr, Z., Danylchuk, A.J., and Skomal, G.B., 2022, A novel framework to predict relative habitat selection in aquatic systems: Applying machine learning and resource selection functions to acoustic telemetry data from multiple shark species: Frontiers in Marine Science, v. 8, 631262, 20 p., https://doi.org/10.3389/fmars.2021.631262.","productDescription":"631262, 20 p.","ipdsId":"IP-124469","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":449826,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3389/fmars.2021.631262","text":"Publisher Index Page"},{"id":396712,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States Virgin Islands","otherGeospatial":"Buck Island Reef National Monument, St Croix","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -64.6329116821289,\n              17.77892988840236\n            ],\n            [\n              -64.60733413696289,\n              17.77892988840236\n            ],\n            [\n              -64.60733413696289,\n              17.794785108241047\n            ],\n            [\n              -64.6329116821289,\n              17.794785108241047\n            ],\n            [\n              -64.6329116821289,\n              17.77892988840236\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"8","noUsgsAuthors":false,"publicationDate":"2021-04-29","publicationStatus":"PW","contributors":{"authors":[{"text":"Griffin, Lucas P.","contributorId":265636,"corporation":false,"usgs":false,"family":"Griffin","given":"Lucas","email":"","middleInitial":"P.","affiliations":[{"id":54744,"text":"Department of Environmental Conservation, University of Massachusetts Amherst","active":true,"usgs":false}],"preferred":false,"id":836934,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Casselberry, Grace A.","contributorId":287602,"corporation":false,"usgs":false,"family":"Casselberry","given":"Grace","email":"","middleInitial":"A.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":836935,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hart, Kristen 0000-0002-5257-7974","orcid":"https://orcid.org/0000-0002-5257-7974","contributorId":220333,"corporation":false,"usgs":true,"family":"Hart","given":"Kristen","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":836936,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Jordaan, Adrian","contributorId":257709,"corporation":false,"usgs":false,"family":"Jordaan","given":"Adrian","affiliations":[{"id":37201,"text":"UMass Amherst","active":true,"usgs":false}],"preferred":false,"id":836937,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Becker, Sarah L.","contributorId":287603,"corporation":false,"usgs":false,"family":"Becker","given":"Sarah","email":"","middleInitial":"L.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":836938,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Novak, Ashleigh J.","contributorId":287604,"corporation":false,"usgs":false,"family":"Novak","given":"Ashleigh","email":"","middleInitial":"J.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":836939,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"DeAngelis, Bryan M.","contributorId":171555,"corporation":false,"usgs":false,"family":"DeAngelis","given":"Bryan","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":836940,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Pollock, Clayton G.","contributorId":287605,"corporation":false,"usgs":false,"family":"Pollock","given":"Clayton","email":"","middleInitial":"G.","affiliations":[{"id":36976,"text":"U.S. National Park Service","active":true,"usgs":false}],"preferred":false,"id":836941,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Lundgren, Ian","contributorId":179151,"corporation":false,"usgs":false,"family":"Lundgren","given":"Ian","email":"","affiliations":[],"preferred":false,"id":836942,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Hillis-Starr, Zandy","contributorId":179152,"corporation":false,"usgs":false,"family":"Hillis-Starr","given":"Zandy","email":"","affiliations":[],"preferred":false,"id":836943,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Danylchuk, Andy J.","contributorId":138981,"corporation":false,"usgs":false,"family":"Danylchuk","given":"Andy","email":"","middleInitial":"J.","affiliations":[{"id":6932,"text":"University of Massachusetts, Amherst","active":true,"usgs":false}],"preferred":false,"id":836944,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Skomal, Gregory B.","contributorId":265634,"corporation":false,"usgs":false,"family":"Skomal","given":"Gregory","email":"","middleInitial":"B.","affiliations":[{"id":39892,"text":"Massachusetts Division of Marine Fisheries","active":true,"usgs":false}],"preferred":false,"id":836945,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70226604,"text":"70226604 - 2022 - Ostracod eye size: A taxonomy-free indicator of the Paleocene-Eocene Thermal Maximum sea level","interactions":[],"lastModifiedDate":"2022-06-16T15:10:32.096245","indexId":"70226604","displayToPublicDate":"2021-04-28T07:12:10","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2673,"text":"Marine Micropaleontology","active":true,"publicationSubtype":{"id":10}},"title":"Ostracod eye size: A taxonomy-free indicator of the Paleocene-Eocene Thermal Maximum sea level","docAbstract":"<div id=\"abstracts\" class=\"Abstracts u-font-serif\"><div id=\"ab0005\" class=\"abstract author\" lang=\"en\"><div id=\"as0005\"><p id=\"sp0045\">Deep-time sea-level changes associated with the Paleocene-Eocene Thermal Maximum (PETM) are of great interest to paleoceanographers and paleontologists, especially in shallow marine settings, like the Atlantic Coastal Plain PETM sections of the Eastern North American Continental Shelf. Accurate paleo-water depth reconstruction is essential to properly interpret and contextualize any PETM-associated paleoceanographic and paleoecological changes that are depth-dependent. In addition, our understanding on eustatic sea-level changes in the greenhouse world without polar ice sheets remains limited. Despite this importance of an accurate and robust paleodepth reconstruction, all water depth estimation methods applied for the shallow marine PETM sections suffer from uncertainties and intrinsic/logical flaws. It is therefore important to develop and apply an independent water depth proxy to complement and validate paleodepth estimates derived from the traditional estimation methods based on sedimentary fossil components and lithological features. Here we present the relative eye size of sighted ostracods as a taxonomy-free water depth proxy and apply it to shallow-marine PETM paleodepth reconstruction of the Mattawoman Creek-Billingsley Road (MCBR) core in Maryland, eastern USA. We identified a significant and rapid reduction in water depth of ~40&nbsp;m within the carbon isotope excursion (CIE) onset consistent with the previous estimation based on benthic foraminifer species associations. This ostracod-eye-based paleodepth reconstruction improves current understanding on the regional paleobathymetry of the Salisbury Embayment and facilitates future studies on continental shelf paleoceanography and paleoecology during the PETM, a rapid, extreme global warming event under long-term greenhouse conditions, which possibly parallels the ongoing anthropogenic warming.</p></div></div></div>","language":"English","publisher":"Elsevier","doi":"10.1016/j.marmicro.2021.101994","usgsCitation":"Tian, S., Yasuhara, M., Robinson, M.M., and Huang, H., 2022, Ostracod eye size: A taxonomy-free indicator of the Paleocene-Eocene Thermal Maximum sea level: Marine Micropaleontology, v. 174, 101994, 9 p., https://doi.org/10.1016/j.marmicro.2021.101994.","productDescription":"101994, 9 p.","ipdsId":"IP-125565","costCenters":[{"id":40020,"text":"Florence Bascom Geoscience Center","active":true,"usgs":true}],"links":[{"id":449828,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.marmicro.2021.101994","text":"Publisher Index Page"},{"id":392297,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Maryland","otherGeospatial":"Mattawoman Creek-Billingsley Road","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -77.24212646484374,\n              38.32657512192453\n            ],\n            [\n              -76.79443359375,\n              38.32657512192453\n            ],\n            [\n              -76.79443359375,\n              38.76479194327964\n            ],\n            [\n              -77.24212646484374,\n              38.76479194327964\n            ],\n            [\n              -77.24212646484374,\n              38.32657512192453\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"174","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Tian, Skye Y","contributorId":269550,"corporation":false,"usgs":false,"family":"Tian","given":"Skye Y","affiliations":[{"id":55550,"text":"University of Hong Kong","active":true,"usgs":false}],"preferred":false,"id":827438,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Yasuhara, Moriaki","contributorId":178705,"corporation":false,"usgs":false,"family":"Yasuhara","given":"Moriaki","email":"","affiliations":[],"preferred":false,"id":827439,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Robinson, Marci M. 0000-0002-9200-4097 mmrobinson@usgs.gov","orcid":"https://orcid.org/0000-0002-9200-4097","contributorId":2082,"corporation":false,"usgs":true,"family":"Robinson","given":"Marci","email":"mmrobinson@usgs.gov","middleInitial":"M.","affiliations":[{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true},{"id":40020,"text":"Florence Bascom Geoscience Center","active":true,"usgs":true}],"preferred":true,"id":827440,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Huang, Huai-Hsuan M","contributorId":269552,"corporation":false,"usgs":false,"family":"Huang","given":"Huai-Hsuan M","affiliations":[{"id":55550,"text":"University of Hong Kong","active":true,"usgs":false}],"preferred":false,"id":827441,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70229169,"text":"70229169 - 2022 - Evaluation of visual implant elastomer, PIT, and p-Chip tagging methods in a small-bodied minnow species","interactions":[],"lastModifiedDate":"2022-03-02T18:15:54.109642","indexId":"70229169","displayToPublicDate":"2021-03-30T12:14:59","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"Evaluation of visual implant elastomer, PIT, and p-Chip tagging methods in a small-bodied minnow species","docAbstract":"<p><span>Reliable fish tagging methods are needed to conduct studies (e.g., movement, habitat, abundance) that inform conservation and management decisions; however, dependable tagging approaches are lacking for many small-bodied fishes. Therefore, our study objective was to determine survival, tag retention (visible implant elastomer [VIE], PIT, or light-activated microtransponder [“p-Chip”]) and tagging effects on short-term growth of the federally threatened Arkansas River Shiner&nbsp;</span><i>Notropis girardi</i><span>. We also examined the use of anesthesia to reduce fish mortality (i.e., reduce handling time) and improve tagging efficiency. Fish tagged with p-Chips had the highest survival (87%), whereas VIE-tagged fish had the second highest survival (67%). Visible implant elastomer tags were retained in our fish 88% of the time, and retention was also high using p-Chips (72%). Location of the VIE tag did not significantly affect survival or retention rates. Survival of PIT-tagged fish significantly increased from 53% to 83% when handling time was reduced; however, tag retention was relatively low in both cases (50% and 45%, respectively). The majority of tagged fish across experiments (83–100%) gained weight regardless of tag type. If the research or management goal is to tag Arkansas River Shiner or similar species with individual identification, p-Chips appear to be an appropriate tag. Particularly if cost is limiting or higher tag retention is needed, VIE tags would also be appropriate for batch tagging (i.e., no individual identification). Additional studies to broaden application of tagging to other small-bodied species would be beneficial</span></p>","language":"English","publisher":"American Fisheries Society","usgsCitation":"Moore, D.M., and Brewer, S.K., 2022, Evaluation of visual implant elastomer, PIT, and p-Chip tagging methods in a small-bodied minnow species: North American Journal of Fisheries Management, v. 41, p. 1066-1078.","productDescription":"13 p.","startPage":"1066","endPage":"1078","ipdsId":"IP-122990","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":396663,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Okhahoma","otherGeospatial":"South Canadian River","volume":"41","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Moore, Desiree M.","contributorId":287527,"corporation":false,"usgs":false,"family":"Moore","given":"Desiree","email":"","middleInitial":"M.","affiliations":[{"id":7249,"text":"Oklahoma State University","active":true,"usgs":false}],"preferred":false,"id":836854,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Brewer, Shannon K. 0000-0002-1537-3921 skbrewer@usgs.gov","orcid":"https://orcid.org/0000-0002-1537-3921","contributorId":2252,"corporation":false,"usgs":true,"family":"Brewer","given":"Shannon","email":"skbrewer@usgs.gov","middleInitial":"K.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":836855,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70221846,"text":"70221846 - 2022 - Sarcoptic mange: An emerging panzootic in wildlife","interactions":[],"lastModifiedDate":"2022-05-13T13:52:12.180816","indexId":"70221846","displayToPublicDate":"2021-03-23T12:48:49","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3849,"text":"Transboundary and Emerging Diseases","active":true,"publicationSubtype":{"id":10}},"title":"Sarcoptic mange: An emerging panzootic in wildlife","docAbstract":"<p><span>Sarcoptic mange, a skin infestation caused by the mite&nbsp;</span><i>Sarcoptes scabiei</i><span>, is an emerging disease for some species of wildlife, potentially jeopardizing their welfare and conservation.&nbsp;</span><i>Sarcoptes scabiei</i><span>&nbsp;has a near-global distribution facilitated by its forms of transmission and use of a large diversity of host species (many of those with broad geographic distribution). In this review, we synthesize the current knowledge concerning the geographic and host taxonomic distribution of mange in wildlife, the epidemiological connections between species, and the potential threat of sarcoptic mange for wildlife conservation. Recent sarcoptic mange outbreaks in wildlife appear to demonstrate ongoing geographic spread, increase in the number of hosts and increased virulence. Sarcoptic mange has been reported in at least 12 orders, 39 families and 148 species of domestic and wild mammals, making it one of the most generalist ectoparasites of mammals. Taxonomically, the orders with most species found infested so far include Perissodactyla&nbsp;(67% species from the entire order), Artiodactyla&nbsp;(47%), and Diprotodontia&nbsp;(67% from this order). This suggests that new species from these mammal orders are likely to suffer cross-species transmission and be reported positive to sarcoptic mange as surveillance improves. We propose a new agenda for the study of sarcoptic mange in wildlife, including the study of the global phylogeography of&nbsp;</span><i>S.&nbsp;scabiei</i><span>, linkages between ecological host traits and sarcoptic mange susceptibility, immunology of individuals and species, development of control strategies in wildlife outbreaks and the effects of global environmental change in the sarcoptic mange system. The ongoing transmission globally and sustained spread among areas and wildlife species make sarcoptic mange an emerging panzootic in wildlife. A better understanding of sarcoptic mange could illuminate the aspects of ecological and evolutionary drivers in cross-species transmission for many emerging diseases.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/tbed.14082","usgsCitation":"Escobar, L.E., Carver, S., Cross, P., Rossi, L., Almberg, E.S., Yabsley, M., Niedringhaus, K.D., Van Wick, P., Dominguez-Villegas, E., Gakuya, F., Xie, Y., Angelone, S., Gortazar, C., and Astorga, F., 2022, Sarcoptic mange: An emerging panzootic in wildlife: Transboundary and Emerging Diseases, v. 69, no. 3, p. 927-942, https://doi.org/10.1111/tbed.14082.","productDescription":"16 p.","startPage":"927","endPage":"942","ipdsId":"IP-113561","costCenters":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"links":[{"id":449832,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.1111/tbed.14082","text":"External Repository"},{"id":387138,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"69","issue":"3","noUsgsAuthors":false,"publicationDate":"2021-05-02","publicationStatus":"PW","contributors":{"authors":[{"text":"Escobar, L. E. 0000-0001-5735-2750","orcid":"https://orcid.org/0000-0001-5735-2750","contributorId":260844,"corporation":false,"usgs":false,"family":"Escobar","given":"L.","email":"","middleInitial":"E.","affiliations":[{"id":12694,"text":"Virginia Tech","active":true,"usgs":false}],"preferred":false,"id":818952,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Carver, Scott 0000-0002-3579-7588","orcid":"https://orcid.org/0000-0002-3579-7588","contributorId":197456,"corporation":false,"usgs":false,"family":"Carver","given":"Scott","email":"","affiliations":[],"preferred":false,"id":818953,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Cross, Paul C. 0000-0001-8045-5213","orcid":"https://orcid.org/0000-0001-8045-5213","contributorId":204814,"corporation":false,"usgs":true,"family":"Cross","given":"Paul C.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":818954,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Rossi, Luca","contributorId":206760,"corporation":false,"usgs":false,"family":"Rossi","given":"Luca","email":"","affiliations":[{"id":37396,"text":"Università degli Studi di Torino, Italy","active":true,"usgs":false}],"preferred":false,"id":818955,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Almberg, E. 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,{"id":70229805,"text":"70229805 - 2022 - Developing common protocols to measure tundra herbivory across spatial scales","interactions":[],"lastModifiedDate":"2022-10-31T14:18:20.876063","indexId":"70229805","displayToPublicDate":"2021-03-12T08:47:20","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5363,"text":"Arctic Science","active":true,"publicationSubtype":{"id":10}},"title":"Developing common protocols to measure tundra herbivory across spatial scales","docAbstract":"Understanding and predicting large-scale ecological responses to global environmental change requires comparative studies across geographic scales with coordinated efforts and standardized methodologies.  We designed, applied and assessed standardized protocols to measure tundra herbivory at three spatial scales: plot, site (habitat), and study area (landscape).  The plot and site-level protocols were tested in the field during summers 2014-2015 at eleven sites, nine of them comprising warming experimental plots included in the International Tundra Experiment (ITEX).  The study area protocols were assessed during 2014-2018 at 24 study areas across the Arctic.  Our protocols provide comparable and easy-to-implement methods for assessing the intensity of invertebrate herbivory within ITEX plots and for characterizing vertebrate herbivore communities at larger spatial scales.  We discuss methodological constraints and make recommendations for how these protocols can be used and how sampling effort can be optimized to obtain comparable estimates of herbivory, both at ITEX sites and at large landscape scales.  The application of these protocols across the tundra biome will allow characterizing and comparing herbivore communities across tundra sites and at ecologically relevant spatial scales, providing an important step towards a better understanding of tundra ecosystem responses to large-scale environmental change.","language":"English","publisher":"Canadian Science Publishing","doi":"10.1139/as-2020-0020","usgsCitation":"Barrio, I.C., Ehrich, D., Soininen, E.M., Ravolainen, V.T., Bueno, C.G., Gilg, O., Koltz, A., Speed, J.D., Hik, D., Morsdorf, M., Alatalo, J., Angerbjörn, A., Bêty, J., Bollache, L., Boulanger-Lapointe, N., Brown, G.S., Eischeid, I., Giroux, M., Hajek, T., Hansen, B.B., Hofhuis, S.P., Lamarre, J., Lang, J.R., Latty, C., Lecomte, N., Macek, P., Mckinnon, L., Myers-Smith, I.H., Pedersen, A.O., Prevey, J.S., Roth, J.D., Saalfeld, S.T., Schmidt, N.M., Smith, P., Sokolov, A., Sokolova, N., Stolz, C., van Bemmelen, R., Varpe, O., Woodard, P.F., and Jonsdottir, I.S., 2022, Developing common protocols to measure tundra herbivory across spatial scales: Arctic Science, v. 8, no. 3, p. 638-679, https://doi.org/10.1139/as-2020-0020.","productDescription":"42 p.","startPage":"638","endPage":"679","ipdsId":"IP-122351","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":449837,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1139/as-2020-0020","text":"Publisher Index Page"},{"id":397232,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada, Greenland, Iceland, Norway, Russia, Sweden, Switzerland, United States","state":"Alaska","city":"Ammarnas, Arviat, Cambridge Bay, Churchill, Igloolik, Kugluktuk, Sabetta, Utqiaġvik, Val Bercla","otherGeospatial":"Adventdalen, Auðkúluheiði, Austfjorden, Barrow, Belyi Island, Billefjorden, Burntpoint Creek, Bylot Island, Canning River, East Bay, Endalen, Erkuta, Forlandsundet, Hochstetter, Isfjorden, Kapp Linné, Karupelv, Kluane, Latnjajaure, Polar Bear Pass, Qikiqtaruk, Svalbard, Zackenberg","volume":"8","issue":"3","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Barrio, Isabel C. 0000-0002-8120-5248","orcid":"https://orcid.org/0000-0002-8120-5248","contributorId":288871,"corporation":false,"usgs":false,"family":"Barrio","given":"Isabel","email":"","middleInitial":"C.","affiliations":[{"id":61865,"text":"Department of Environmental and Forest Sciences, Agricultural University of Iceland","active":true,"usgs":false}],"preferred":false,"id":838363,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ehrich, D.","contributorId":288872,"corporation":false,"usgs":false,"family":"Ehrich","given":"D.","affiliations":[{"id":61868,"text":"2UiT The Arctic University of Norway, Framstredet 39, NO-9037, Tromsø, Norway","active":true,"usgs":false}],"preferred":false,"id":838364,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Soininen, E. 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,{"id":70224968,"text":"70224968 - 2022 - Mechanisms controlling climate warming impact on the occurrence of hypoxia in Chesapeake Bay","interactions":[],"lastModifiedDate":"2023-01-18T15:38:30.872009","indexId":"70224968","displayToPublicDate":"2021-03-01T10:18:35","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2529,"text":"Journal of the American Water Resources Association","active":true,"publicationSubtype":{"id":10}},"title":"Mechanisms controlling climate warming impact on the occurrence of hypoxia in Chesapeake Bay","docAbstract":"<p>A<span>Climate change represents an increasing stressor on estuarine and coastal ecosystems. A series of simulations were run using the Integrated Compartment Water Quality Model to determine the magnitude of various mechanisms controlling the effect of climate warming on dissolved oxygen (DO) in the Chesapeake Bay. The results suggested that the average hypoxic volume in the summer would increase by 9% (410&nbsp;Mm</span><sup>3</sup><span>) from 1995 to 2025 as air temperature increases by 1.06°C and water temperature by 0.9°C. The change in DO solubility contributes 55% of the total climate warming effect, biological rates 33%, and stratification 11%. The Rappahannock Shoal, a hydraulic control point, plays a major role in determining the effect of climate warming on DO in the Bay. Due to the abrupt change in bathymetry, the convergence between seaward-moving freshwater and landward-moving saltwater causes downwelling and enhanced vertical mixing which introduces surface water of higher temperature to the deep channel and accelerates organic matter remineralization and oxygen consumption in deep waters. Surface water DO concentrations will decrease under climate warming conditions due to lower DO solubility, reducing DO flux to the deep channel and contributing to hypoxia development. These findings provide critical information for future management decision making regarding the effects of climate warming on DO in Chesapeake Bay and other estuaries.</span></p>","language":"English","publisher":"Wiley","doi":"10.1111/1752-1688.12907","usgsCitation":"Tian, R., Cerco, C., Bhatt, G., Linker, L.C., and Shenk, G.W., 2022, Mechanisms controlling climate warming impact on the occurrence of hypoxia in Chesapeake Bay: Journal of the American Water Resources Association, v. 58, no. 6, p. 855-875, https://doi.org/10.1111/1752-1688.12907.","productDescription":"21 p.","startPage":"855","endPage":"875","ipdsId":"IP-126223","costCenters":[{"id":37759,"text":"VA/WV Water Science Center","active":true,"usgs":true}],"links":[{"id":390385,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Maryland, Virginia","otherGeospatial":"Chesapeake Bay","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -77.662353515625,\n              36.88840804313823\n            ],\n            [\n              -75.60791015625,\n              36.88840804313823\n            ],\n            [\n              -75.60791015625,\n              39.54641191968671\n            ],\n            [\n              -77.662353515625,\n              39.54641191968671\n            ],\n            [\n              -77.662353515625,\n              36.88840804313823\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"58","issue":"6","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Tian, Richard 0000-0002-9416-8669","orcid":"https://orcid.org/0000-0002-9416-8669","contributorId":261309,"corporation":false,"usgs":false,"family":"Tian","given":"Richard","email":"","affiliations":[{"id":52807,"text":"U.S. Environmental Protection Agency Chesapeake Bay Program","active":true,"usgs":false}],"preferred":false,"id":824914,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Cerco, Carl 0000-0001-7855-3287","orcid":"https://orcid.org/0000-0001-7855-3287","contributorId":261306,"corporation":false,"usgs":false,"family":"Cerco","given":"Carl","email":"","affiliations":[{"id":52804,"text":"U.S. Army Corps of Eng.","active":true,"usgs":false}],"preferred":false,"id":824915,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bhatt, Gopal 0000-0002-6627-793X","orcid":"https://orcid.org/0000-0002-6627-793X","contributorId":252963,"corporation":false,"usgs":false,"family":"Bhatt","given":"Gopal","email":"","affiliations":[{"id":7260,"text":"Pennsylvania State University","active":true,"usgs":false}],"preferred":false,"id":824916,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Linker, Lewis C. 0000-0002-3456-3659","orcid":"https://orcid.org/0000-0002-3456-3659","contributorId":252964,"corporation":false,"usgs":false,"family":"Linker","given":"Lewis","email":"","middleInitial":"C.","affiliations":[{"id":6914,"text":"U.S. Environmental Protection Agency","active":true,"usgs":false}],"preferred":false,"id":824917,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Shenk, Gary W. 0000-0001-6451-2513","orcid":"https://orcid.org/0000-0001-6451-2513","contributorId":225440,"corporation":false,"usgs":true,"family":"Shenk","given":"Gary","email":"","middleInitial":"W.","affiliations":[{"id":37759,"text":"VA/WV Water Science Center","active":true,"usgs":true}],"preferred":true,"id":824918,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70233471,"text":"70233471 - 2022 - Recent recovery and expansion of Guam’s locally endangered Såli (Micronesian Starling) Aplonis opaca population in the presence of the invasive brown treesnake","interactions":[],"lastModifiedDate":"2022-07-21T13:51:45.731403","indexId":"70233471","displayToPublicDate":"2021-03-01T08:41:40","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1048,"text":"Bird Conservation International","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Recent recovery and expansion of Guam’s locally endangered Såli (Micronesian Starling) <i>Aplonis opaca</i> population in the presence of the invasive brown treesnake","title":"Recent recovery and expansion of Guam’s locally endangered Såli (Micronesian Starling) Aplonis opaca population in the presence of the invasive brown treesnake","docAbstract":"<p>Assessing the impacts of invasive predators on the demography and distribution of native species is critical for understanding mechanisms of species persistence and informing the design of recovery programmes. On the oceanic island of Guam, the introduction of the predatory brown treesnake<span>&nbsp;</span><span class=\"italic\">Boiga irregularis</span><span>&nbsp;</span>after World War II caused the near-total loss of the native forest avifauna. Localised snake control measures have been implemented since the early 1990s, yet it remains poorly understood how they have impacted Guam’s remaining native bird populations. To address this question, we combined intensive area searches of Andersen Air Force Base (AAFB) with island-wide transect surveys and opportunistic sightings to provide a comprehensive update on the distribution and abundance of Såli (Micronesian Starling,<span>&nbsp;</span><span class=\"italic\">Aplonis opaca</span>) – one of Guam’s last extant native bird species. Area searches of AAFB, where the largest remnant of the Såli population persists, revealed a 15-fold population increase since the last survey in the early 1990s, and transect surveys and opportunistic sightings indicate incipient recolonisation of other urbanised areas of northern and central Guam. We estimate the current island-wide population size at ~1,400 individuals. The population increase can likely be attributed to a combination of snake control measures and the Såli’s ability to exploit urban refugia for nesting and roosting. Although these trends demonstrate some population recovery, a skewed age ratio (&gt;90% adults and subadults) at AAFB and a highly urbanised distribution and low abundance outside AAFB indicate that snake predation continues to strongly impact the population. More intensive snake suppression efforts, particularly in forested areas, may allow for the Såli population to attain its former distribution and abundance on Guam. More broadly, our findings reinforce the importance of urban areas as refugia for some threatened species.</p>","language":"English","publisher":"Cambridge University Press","doi":"10.1017/S0959270920000726","usgsCitation":"Pollock, H., Kastner, M., Wiles, G., Thierry, H., Duenas, L., Paxton, E.H., Suckow, N., Quitugua, J., and Rogers, H., 2022, Recent recovery and expansion of Guam’s locally endangered Såli (Micronesian Starling) Aplonis opaca population in the presence of the invasive brown treesnake: Bird Conservation International, v. 32, no. 1, p. 95-110, https://doi.org/10.1017/S0959270920000726.","productDescription":"16 p.","startPage":"95","endPage":"110","ipdsId":"IP-124414","costCenters":[{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true}],"links":[{"id":449842,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1017/s0959270920000726","text":"Publisher Index 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Center","active":true,"usgs":true}],"preferred":true,"id":847181,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Suckow, Nicole","contributorId":293515,"corporation":false,"usgs":false,"family":"Suckow","given":"Nicole","email":"","affiliations":[{"id":6621,"text":"Colorado State University","active":true,"usgs":false}],"preferred":false,"id":847182,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Quitugua, Jeff","contributorId":293516,"corporation":false,"usgs":false,"family":"Quitugua","given":"Jeff","email":"","affiliations":[{"id":63321,"text":"Guam Division of Aquatic and Wildlife Resources","active":true,"usgs":false}],"preferred":false,"id":847183,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Rogers, Haldre","contributorId":279510,"corporation":false,"usgs":false,"family":"Rogers","given":"Haldre","email":"","affiliations":[{"id":6911,"text":"Iowa State University","active":true,"usgs":false}],"preferred":false,"id":847184,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70228634,"text":"70228634 - 2022 - Evidence for maternal style among adult female dolphins when sharing pectoral fin contacts with their calves","interactions":[],"lastModifiedDate":"2024-09-23T15:39:37.17135","indexId":"70228634","displayToPublicDate":"2021-02-16T14:19:24","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5550,"text":"Animal Behavior and Cognition","active":true,"publicationSubtype":{"id":10}},"title":"Evidence for maternal style among adult female dolphins when sharing pectoral fin contacts with their calves","docAbstract":"<p>Adult bottlenose dolphins share pectoral fin contacts (PFC) to manage their social relationships but less is known about how mothers share PFC with their calves. Using a dataset collected over 16 years, we analyzed how 10 matrilines, including three second generation female&nbsp; dolphins in a maternal role, used PFC with their pre-weaned calves. Mothers had different rates of initiation with their calves forming a continuum from those initiating few contacts (15%) to those initiating more (44%). For mothers with all-aged calves, the lateral side was contacted the most to start interactions with mothers contacting body parts at a similar rate. All mothers assumed the same posture regardless of their role as initiator or receiver, with horizontal the most prevalent posture. Two maternal styles were found for PFC: high and low use of PFC. Within the high PFC group, there was individual variation that was related to calf sex. Even though evidence of maternal style was confirmed in PFC exchanges between adult female dolphins and their calves, the number of PFC shared between these kin was only ~9% of all documented PFC contacts (N = 4,345) over 16 years, suggesting that other forms of&nbsp; tactile contact may be&nbsp; more important within&nbsp; the confines of&nbsp; the mother-offspring relationship in delphinids.</p>","language":"English","publisher":"Elsevier","doi":"10.26451/abc.08.01.05.2021","usgsCitation":"Dudzinski, K.M., Ribic, C., Manitzas Hill, H.M., and Bolton, T., 2022, Evidence for maternal style among adult female dolphins when sharing pectoral fin contacts with their calves: Animal Behavior and Cognition, v. 8, no. 1, p. 52-68, https://doi.org/10.26451/abc.08.01.05.2021.","productDescription":"17 p.","startPage":"52","endPage":"68","ipdsId":"IP-113244","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":467216,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.26451/abc.08.01.05.2021","text":"Publisher Index Page"},{"id":462139,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Honduras","otherGeospatial":"Bailey’s Key, Roatan","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -86.57883167266846,\n              16.32594661242069\n            ],\n            [\n              -86.57033443450928,\n              16.32594661242069\n            ],\n            [\n              -86.57033443450928,\n              16.33216543582161\n            ],\n            [\n              -86.57883167266846,\n              16.33216543582161\n            ],\n            [\n              -86.57883167266846,\n              16.32594661242069\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"8","issue":"1","noUsgsAuthors":false,"publicationDate":"2021-02-01","publicationStatus":"PW","contributors":{"authors":[{"text":"Dudzinski, Kathleen M.","contributorId":279358,"corporation":false,"usgs":false,"family":"Dudzinski","given":"Kathleen","email":"","middleInitial":"M.","affiliations":[{"id":56353,"text":"Dolphin Communication Project","active":true,"usgs":false}],"preferred":false,"id":834897,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ribic, Christine 0000-0003-2583-1778 caribic@usgs.gov","orcid":"https://orcid.org/0000-0003-2583-1778","contributorId":147952,"corporation":false,"usgs":true,"family":"Ribic","given":"Christine","email":"caribic@usgs.gov","affiliations":[{"id":5068,"text":"Midwest Regional Director's Office","active":true,"usgs":true},{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":834896,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Manitzas Hill, Heather M.","contributorId":279359,"corporation":false,"usgs":false,"family":"Manitzas Hill","given":"Heather","email":"","middleInitial":"M.","affiliations":[{"id":16961,"text":"Saint Mary's University","active":true,"usgs":false}],"preferred":false,"id":834898,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Bolton, Teresa T.","contributorId":279360,"corporation":false,"usgs":false,"family":"Bolton","given":"Teresa T.","affiliations":[{"id":56942,"text":"The Roatan Institute for Marine Sciences","active":true,"usgs":false}],"preferred":false,"id":834899,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70218171,"text":"70218171 - 2022 - Aquatic toxicity of chemical road dust suppressants to freshwater organisms","interactions":[],"lastModifiedDate":"2022-02-15T15:28:35.5349","indexId":"70218171","displayToPublicDate":"2021-02-10T10:11:30","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":887,"text":"Archives of Environmental Contamination and Toxicology","active":true,"publicationSubtype":{"id":10}},"title":"Aquatic toxicity of chemical road dust suppressants to freshwater organisms","docAbstract":"<p><span>Unpaved roads make up at least 14 million kilometers of the worldwide road network. Although investigations of road runoff often are focused on paved roads, unpaved roads contribute large volumes of runoff to roadside aquatic habitats and introduce unique constituents to runoff, such as chemical dust suppressants. At least 200 products across five chemical categories are commercially available for road dust suppression and are typically applied at rates up to 4.5 L/m</span><sup>2</sup><span>. Many of these products are poorly described and are lacking basic information on environmental transport, fate, and potential toxicity to roadside organisms. We characterized the aquatic toxicity of 27 commercially available dust control products, including 13 biobased products from the U.S. Department of Agriculture BioPreferred catalog, using juvenile rainbow trout. Acute toxicity varied by more than 1000-fold among products, with 96-h LC50 values ranging from 1.7 to &gt; 16,000&nbsp;mg/L. Toxicity was not well-predicted by product category. Testing with selected products after simulated weathering under UV radiation did not provide evidence of photoenhanced toxicity. Additional tests with freshwater mussels, juvenile crayfish, pond snails, and amphibian larvae indicated that juvenile rainbow trout were reasonable surrogates for these organisms for a subset of products. This effort represents one of the first comparative studies of dust suppressant toxicity and provides important information for assessing risk to aquatic resources from a widely used but understudied class of contaminants in road runoff.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s00244-020-00806-y","usgsCitation":"Kunz, B.K., Little, E.E., and Barandino, V.L., 2022, Aquatic toxicity of chemical road dust suppressants to freshwater organisms: Archives of Environmental Contamination and Toxicology, v. 82, p. 294-305, https://doi.org/10.1007/s00244-020-00806-y.","productDescription":"12 p.","startPage":"294","endPage":"305","ipdsId":"IP-122732","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":436065,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9VK2LLO","text":"USGS data release","linkHelpText":"Chemical and biological data from acute toxicity tests with road dust suppressant chemicals and five freshwater organisms"},{"id":383273,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"82","noUsgsAuthors":false,"publicationDate":"2021-02-10","publicationStatus":"PW","contributors":{"authors":[{"text":"Kunz, Bethany K. 0000-0002-7193-9336 bkunz@usgs.gov","orcid":"https://orcid.org/0000-0002-7193-9336","contributorId":3798,"corporation":false,"usgs":true,"family":"Kunz","given":"Bethany","email":"bkunz@usgs.gov","middleInitial":"K.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":810306,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Little, Edward E. 0000-0003-0034-3639","orcid":"https://orcid.org/0000-0003-0034-3639","contributorId":251685,"corporation":false,"usgs":true,"family":"Little","given":"Edward","email":"","middleInitial":"E.","affiliations":[{"id":38257,"text":"USGS-Columbia Environmental Research Center, Columbia, MO (Retired)","active":true,"usgs":false}],"preferred":false,"id":810307,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Barandino, Vincent L.","contributorId":251686,"corporation":false,"usgs":false,"family":"Barandino","given":"Vincent","email":"","middleInitial":"L.","affiliations":[{"id":50373,"text":"U.S.D.A. Forest Service, National Technology and Development Center, San Dimas, CA","active":true,"usgs":false}],"preferred":false,"id":810308,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70227954,"text":"70227954 - 2022 - River floodplain abandonment and channel deepening coincide with the onset of clear-cut logging in a coastal California redwood forest","interactions":[],"lastModifiedDate":"2022-03-28T16:47:00.826195","indexId":"70227954","displayToPublicDate":"2021-02-02T09:48:52","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1425,"text":"Earth Surface Processes and Landforms","active":true,"publicationSubtype":{"id":10}},"title":"River floodplain abandonment and channel deepening coincide with the onset of clear-cut logging in a coastal California redwood forest","docAbstract":"<p><span>Changes in both land use and climate can alter the balance of transport capacity and sediment supply in rivers. Hence, the primary driver of recent incision or aggradation in alluvial channels is often unclear. The San Lorenzo River on the central coast of California is one location where both climate and land use—specifically, clear-cut forestry of coastal redwoods—could explain recent vertical incision and floodplain abandonment. At our field site on the San Lorenzo, we estimate the magnitude of recent incision using both the ratio of bankfull to critical Shields numbers (</span><span id=\"MathJax-Element-1-Frame\" class=\"MathJax\" data-mathml=\"<math xmlns=&quot;http://www.w3.org/1998/Math/MathML&quot; altimg=&quot;urn:x-wiley:01979337:media:esp5299:esp5299-math-0001&quot; display=&quot;inline&quot; location=&quot;graphic/esp5299-math-0001.png&quot;><msubsup><mi>&amp;#x3C4;</mi><mi mathvariant=&quot;italic&quot;>bf</mi><mo>*</mo></msubsup><mo>/</mo><msubsup><mi>&amp;#x3C4;</mi><mi>c</mi><mo>*</mo></msubsup></math>\"><span id=\"MathJax-Span-1\" class=\"math\"><span><span id=\"MathJax-Span-2\" class=\"mrow\"><span id=\"MathJax-Span-3\" class=\"msubsup\"><span id=\"MathJax-Span-4\" class=\"mi\">\uD835\uDF0F</span><sup><span id=\"MathJax-Span-5\" class=\"mo\">∗</span></sup><sub><span id=\"MathJax-Span-6\" class=\"mi\">\uD835\uDC4F\uD835\uDC53</span></sub></span><span id=\"MathJax-Span-7\" class=\"mo\">/</span><span id=\"MathJax-Span-8\" class=\"msubsup\"><span id=\"MathJax-Span-9\" class=\"mi\">\uD835\uDF0F</span><sup><span id=\"MathJax-Span-10\" class=\"mo\">∗</span></sup><sub><span id=\"MathJax-Span-11\" class=\"mi\">\uD835\uDC50</span></sub></span></span></span></span></span><span>) and the geomorphically effective discharge, calculated from historical gauge data. The Shields number ratio suggests that the normalized bankfull stress of the San Lorenzo River is in the upper 1–2% of West Coast rivers, and the effective discharge corresponds to flow depths ~2–4 m below current bankfull conditions. Radiocarbon ages from detrital charcoal in floodplain sediment reveal active floodplain deposition during the 1600s and possibly into the 1800s, constraining the timing of incision to the last few centuries. Multiple hanging tributaries above the mainstem San Lorenzo River, along with patterns in vegetation on terrace surfaces, corroborate our estimates of the magnitude and timing of incision. Taken together, our findings suggest that floodplain abandonment in this reach was mainly due to methods employed during logging that increased shear stress on the channel bed and reduced sediment storage capacity. We suggest that direct channel modifications in rivers can counterbalance increases in sediment delivery due to clear-cutting, resulting in channel incision rather than aggradation. Today, a young, lower surface appears to be forming adjacent to the San Lorenzo River, which we interpret as an incipient floodplain that is in equilibrium with modern sediment supply and transport capacity.</span></p>","language":"English","publisher":"Wiley","doi":"10.1002/esp.5299","usgsCitation":"Chapman, W.A., Finnegan, N.J., Pfeiffer, A.M., and La Selle, S., 2022, River floodplain abandonment and channel deepening coincide with the onset of clear-cut logging in a coastal California redwood forest: Earth Surface Processes and Landforms, v. 47, no. 4, p. 994-1012, https://doi.org/10.1002/esp.5299.","productDescription":"19 p.","startPage":"994","endPage":"1012","ipdsId":"IP-127500","costCenters":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":449846,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/esp.5299","text":"Publisher Index Page"},{"id":436066,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9ZT7ZOX","text":"USGS data release","linkHelpText":"Vibracore CT scans from the San Lorenzo River"},{"id":395272,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","otherGeospatial":"San Lorenzo River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.09209442138673,\n              37.02379869410646\n            ],\n            [\n              -122.04591751098631,\n              37.02379869410646\n            ],\n            [\n              -122.04591751098631,\n              37.08065395744942\n            ],\n            [\n              -122.09209442138673,\n              37.08065395744942\n            ],\n            [\n              -122.09209442138673,\n              37.02379869410646\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"47","issue":"4","noUsgsAuthors":false,"publicationDate":"2022-01-12","publicationStatus":"PW","contributors":{"authors":[{"text":"Chapman, William A. L. 0000-0003-1056-4830","orcid":"https://orcid.org/0000-0003-1056-4830","contributorId":273226,"corporation":false,"usgs":false,"family":"Chapman","given":"William","email":"","middleInitial":"A. L.","affiliations":[{"id":27155,"text":"University of California Santa Cruz","active":true,"usgs":false}],"preferred":false,"id":832690,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Finnegan, Noah J.","contributorId":198803,"corporation":false,"usgs":false,"family":"Finnegan","given":"Noah","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":832691,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Pfeiffer, Allison M. 0000-0002-3974-132X","orcid":"https://orcid.org/0000-0002-3974-132X","contributorId":273227,"corporation":false,"usgs":false,"family":"Pfeiffer","given":"Allison","email":"","middleInitial":"M.","affiliations":[{"id":12723,"text":"Western Washington University","active":true,"usgs":false}],"preferred":false,"id":832692,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"La Selle, SeanPaul 0000-0002-4500-7885 slaselle@usgs.gov","orcid":"https://orcid.org/0000-0002-4500-7885","contributorId":181565,"corporation":false,"usgs":true,"family":"La Selle","given":"SeanPaul","email":"slaselle@usgs.gov","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true},{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":832693,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70229437,"text":"70229437 - 2022 - Aleutian Low variability for the last 7500 years and its relation to the Westerly Jet","interactions":[],"lastModifiedDate":"2022-08-15T13:48:31.664386","indexId":"70229437","displayToPublicDate":"2021-02-02T06:36:09","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3218,"text":"Quaternary Research","active":true,"publicationSubtype":{"id":10}},"title":"Aleutian Low variability for the last 7500 years and its relation to the Westerly Jet","docAbstract":"<div class=\"abstract-content\"><div class=\"abstract\" data-abstract-type=\"normal\"><p>The Aleutian Low (AL) is one of the major atmospheric systems that determines environmental conditions during winter in the North Pacific Ocean, with impacts that affect the climates of both Asia and North America from mid- to high latitudes. However, the multi-centennial and longer scale behavior of the AL during the Holocene is not fully understood. In this study, AL variability since 7.5 ka was examined by applying the principal component analysis technique to published δ<span class=\"sup\">18</span>O data derived from sedimentary calcite, peat, ice, and speleothem from western North America. The extracted Principal Component 1 (PC1) represents a dramatic change from the mid- to late Holocene, and appears to reflect long-term intensified AL related to interactions between orbitally-driven southward shift of the Westerly Jet (WJ) over East Asia and the northwestern Pacific, and intensification of the El Niño–Southern Oscillation. In contrast, PC2 is characterized by multi-centennial to millennial-scale oscillations, with a spatial loading pattern that suggests PC2 reflects AL intensity and position shifts. These oscillations are contemporaneous with both WJ latitude and/or the meandering path shifts over East Asia and solar activity change, suggesting that a decrease/increase in solar irradiance is related to AL variability via interactions with the WJ.</p></div></div>","language":"English","publisher":"Cambridge University Press","doi":"10.1017/qua.2020.116","usgsCitation":"Nagashima, K., Addison, J.A., Irino, T., Omori, T., Yoshimura, K., and Harada, N., 2022, Aleutian Low variability for the last 7500 years and its relation to the Westerly Jet: Quaternary Research, v. 108, p. 161-179, https://doi.org/10.1017/qua.2020.116.","productDescription":"19 p.","startPage":"161","endPage":"179","ipdsId":"IP-104609","costCenters":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":396844,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"108","noUsgsAuthors":false,"publicationDate":"2021-02-02","publicationStatus":"PW","contributors":{"authors":[{"text":"Nagashima, Kana","contributorId":288111,"corporation":false,"usgs":false,"family":"Nagashima","given":"Kana","email":"","affiliations":[{"id":40272,"text":"Japan Agency for Marine-Earth Science and Technology","active":true,"usgs":false}],"preferred":false,"id":837439,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Addison, Jason A. 0000-0003-2416-9743 jaddison@usgs.gov","orcid":"https://orcid.org/0000-0003-2416-9743","contributorId":4192,"corporation":false,"usgs":true,"family":"Addison","given":"Jason","email":"jaddison@usgs.gov","middleInitial":"A.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":837440,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Irino, Tomohisa","contributorId":288122,"corporation":false,"usgs":false,"family":"Irino","given":"Tomohisa","email":"","affiliations":[],"preferred":false,"id":837446,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Omori, Takayuki","contributorId":288123,"corporation":false,"usgs":false,"family":"Omori","given":"Takayuki","email":"","affiliations":[],"preferred":false,"id":837447,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Yoshimura, Kei","contributorId":240132,"corporation":false,"usgs":false,"family":"Yoshimura","given":"Kei","email":"","affiliations":[{"id":7267,"text":"University of Tokyo","active":true,"usgs":false}],"preferred":false,"id":837448,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Harada, Naomi","contributorId":199653,"corporation":false,"usgs":false,"family":"Harada","given":"Naomi","email":"","affiliations":[],"preferred":false,"id":837441,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70217755,"text":"70217755 - 2022 - Sr, Nd, Hf and Pb isotope geochemistry of Early Miocene shoshonitic lavas from the South Fiji Basin: Note","interactions":[],"lastModifiedDate":"2022-08-01T16:46:20.858468","indexId":"70217755","displayToPublicDate":"2021-01-28T11:13:52","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2869,"text":"New Zealand Journal of Geology and Geophysics","active":true,"publicationSubtype":{"id":10}},"title":"Sr, Nd, Hf and Pb isotope geochemistry of Early Miocene shoshonitic lavas from the South Fiji Basin: Note","docAbstract":"<p><span>We present new Sr, Nd, Hf and Pb isotope data for Early Miocene shoshonitic and high-K lavas dredged from seamounts in the South Fiji Basin, southwest Pacific Ocean. Our analyses provide a useful reference dataset for this distinctive compositional suite. The shoshonitic lavas formed in an intra-oceanic back-arc basin setting and are broadly coeval with nearby arc and back-arc basin lavas. Further work in the region will be needed before the tectonic implications of the shoshonitic and high-K lavas are fully understood.</span></p>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/00288306.2021.1876110","usgsCitation":"Mortimer, N., Bosch, D., Laporte-Magoni, C., Todd, E., and Gill, J.B., 2022, Sr, Nd, Hf and Pb isotope geochemistry of Early Miocene shoshonitic lavas from the South Fiji Basin: Note: New Zealand Journal of Geology and Geophysics, v. 65, no. 2, p. 374-379, https://doi.org/10.1080/00288306.2021.1876110.","productDescription":"6 p.","startPage":"374","endPage":"379","ipdsId":"IP-123815","costCenters":[{"id":119,"text":"Alaska Science Center Geology Minerals","active":true,"usgs":true}],"links":[{"id":382852,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"65","issue":"2","noUsgsAuthors":false,"publicationDate":"2021-01-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Mortimer, Nick","contributorId":248599,"corporation":false,"usgs":false,"family":"Mortimer","given":"Nick","email":"","affiliations":[{"id":49959,"text":"GNS Science, Dunedin New Zealand","active":true,"usgs":false}],"preferred":false,"id":809488,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bosch, Delphine","contributorId":248600,"corporation":false,"usgs":false,"family":"Bosch","given":"Delphine","email":"","affiliations":[{"id":49960,"text":"Université Montpellier, France","active":true,"usgs":false}],"preferred":false,"id":809489,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Laporte-Magoni, Christine","contributorId":248601,"corporation":false,"usgs":false,"family":"Laporte-Magoni","given":"Christine","email":"","affiliations":[{"id":49961,"text":"Université de Nouvelle Calédonnie, New Caledonia","active":true,"usgs":false}],"preferred":false,"id":809490,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Todd, Erin 0000-0002-4871-9730 etodd@usgs.gov","orcid":"https://orcid.org/0000-0002-4871-9730","contributorId":202811,"corporation":false,"usgs":true,"family":"Todd","given":"Erin","email":"etodd@usgs.gov","affiliations":[{"id":119,"text":"Alaska Science Center Geology Minerals","active":true,"usgs":true}],"preferred":true,"id":809491,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Gill, James B 0000-0003-2584-9687","orcid":"https://orcid.org/0000-0003-2584-9687","contributorId":248602,"corporation":false,"usgs":false,"family":"Gill","given":"James","email":"","middleInitial":"B","affiliations":[{"id":6949,"text":"University of California, Santa Cruz","active":true,"usgs":false}],"preferred":false,"id":809492,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70236763,"text":"70236763 - 2022 - S2HM must be real-time or not?","interactions":[],"lastModifiedDate":"2022-09-19T14:43:55.68425","indexId":"70236763","displayToPublicDate":"2021-01-11T09:36:51","publicationYear":"2022","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"displayTitle":"S<sup>2</sup>HM must be real-time or not?","title":"S2HM must be real-time or not?","docAbstract":"<p><span>Seismic structural health monitoring (S</span><sup>2</sup><span>HM) has advanced significantly in the last three decades. However, currently there is no consensus on the need for real-time processing of data acquired during an earthquake. Numerous applications exist whereby S</span><sup>2</sup><span>HM-equipped systems record valuable seismic response data. A delayed use of the seismic data prohibits timely discovery of hidden damages in a structure which, in turn, possibly increases its vulnerability during events to follow – with increased risk to occupants. Such risks are of particular concern when, for example, there are long-distance/long period effects e.g. for tall buildings and long-span bridges that are significantly affected by events that originate at far distances. These phenomena necessitate near real-time monitored data to make timely data-based informed decisions on the health or performance of the affected structure. The paper discusses criteria for functionality and occupiability thresholds in actual applications.</span></p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"European workshop on structural health monitoring: Special collection of 2020 papers - Volume 1","largerWorkSubtype":{"id":12,"text":"Conference publication"},"language":"English","doi":"10.1007/978-3-030-64594-6_2","usgsCitation":"Celebi, M., and Limongelli, M., 2022, S2HM must be real-time or not?, <i>in</i> European workshop on structural health monitoring: Special collection of 2020 papers - Volume 1, v. 1, p. 12-22, https://doi.org/10.1007/978-3-030-64594-6_2.","productDescription":"11 p.","startPage":"12","endPage":"22","ipdsId":"IP-116213","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":489182,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"http://hdl.handle.net/11311/1158710","text":"External Repository"},{"id":406958,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"1","noUsgsAuthors":false,"publicationDate":"2021-01-11","publicationStatus":"PW","contributors":{"authors":[{"text":"Celebi, Mehmet 0000-0002-4769-7357 celebi@usgs.gov","orcid":"https://orcid.org/0000-0002-4769-7357","contributorId":200969,"corporation":false,"usgs":true,"family":"Celebi","given":"Mehmet","email":"celebi@usgs.gov","affiliations":[],"preferred":true,"id":852116,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Limongelli, Maria","contributorId":296668,"corporation":false,"usgs":false,"family":"Limongelli","given":"Maria","email":"","affiliations":[{"id":64123,"text":"Politechnique of Milan, Italy","active":true,"usgs":false}],"preferred":false,"id":852117,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70233455,"text":"70233455 - 2022 - The roles of phenotypic plasticity and adaptation in morphology and performance of an invasive species in a novel environment","interactions":[],"lastModifiedDate":"2022-07-21T14:08:56.702606","indexId":"70233455","displayToPublicDate":"2021-01-01T09:03:16","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1455,"text":"Ecological Entomology","active":true,"publicationSubtype":{"id":10}},"title":"The roles of phenotypic plasticity and adaptation in morphology and performance of an invasive species in a novel environment","docAbstract":"<p>(1) Species introductions provide insights into rapid adaptation and adaptive phenotypic plasticity, as populations encounter and respond to new environments and selection pressures. However, maladaptive responses are increasingly recognized to also be common in nature. The spotted-wing drosophila, <i>Drosophila suzukii</i>, has rapidly invaded divergent environments providing the opportunity to examine adaptive and maladaptive phenotypic and evolutionary responses to its introduced range.</p><p>(2) We studied how population density in the field and wing size of individuals varied over an elevational gradient on Hawaii. We then conducted a reciprocal common garden experiment to evaluate how temperature influenced wing size and other correlates of fitness. We did this by reciprocally rearing <i>D. suzukii</i> collected from low and high elevations in temperatures representative of low and high elevation.</p><p>(3) We observed an elevational cline in wing size, in which wing size increased with elevation. Additionally, flies were more abundant at higher elevation. In the reciprocal common garden experiment, flies emerged faster in the warm, low elevation temperature and developed larger wings in the cool, high elevation temperature. Emergence of flies from high and low elevation sites showed a pattern suggesting maladaptation to the temperature representing their home environment.</p><p>(4) We suggest that opposing selection pressures, the high vagility of flies, and extreme plasticity in body size constrain adaptation to temperature along an elevational gradient. While successful invasive species such as <i>D. suzukii</i> often exhibit local adaptation, this research demonstrates that invasive species can be successful even without such adaptation.</p>","language":"English","publisher":"Wiley","doi":"10.1111/een.13087","usgsCitation":"Jardeleza, M.G., Koch, J.B., Pearse, I.S., Ghalambor, C.K., and Hufbauer, R.A., 2022, The roles of phenotypic plasticity and adaptation in morphology and performance of an invasive species in a novel environment: Ecological Entomology, v. 47, p. 25-37, https://doi.org/10.1111/een.13087.","productDescription":"13 p.","startPage":"25","endPage":"37","ipdsId":"IP-130924","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":404215,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Hawai'i","county":"Hawai'i 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Center","active":true,"usgs":true}],"preferred":true,"id":847139,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Ghalambor, Cameron K.","contributorId":93722,"corporation":false,"usgs":false,"family":"Ghalambor","given":"Cameron","email":"","middleInitial":"K.","affiliations":[{"id":6998,"text":"Department of Biology, Colorado State University","active":true,"usgs":false}],"preferred":false,"id":847140,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hufbauer, Ruth A.","contributorId":219901,"corporation":false,"usgs":false,"family":"Hufbauer","given":"Ruth","email":"","middleInitial":"A.","affiliations":[{"id":40092,"text":"Department of Bioagricultural Science and Pest Management, Colorado State University, Fort Collins, CO","active":true,"usgs":false}],"preferred":false,"id":847141,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70233461,"text":"70233461 - 2022 - Budburst timing of valley oaks at Hastings Reservation, central coastal California","interactions":[],"lastModifiedDate":"2022-07-21T13:40:52.031848","indexId":"70233461","displayToPublicDate":"2021-01-01T08:28:16","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2639,"text":"Madroño","active":true,"publicationSubtype":{"id":10}},"title":"Budburst timing of valley oaks at Hastings Reservation, central coastal California","docAbstract":"<p>We studied the timing of budburst of valley oak (<i>Quercus lobata</i><span>&nbsp;</span>Née) at Hastings Reservation, central coastal California. Similar to other taxa, budburst was advanced by warmer temperatures. Over the 30-year study period, however, there were no significant trends in either air temperature or the timing of budburst, except during the 2014–2016 drought, during which the earliest budburst dates were advanced. Several individual tree characteristics correlated with budburst timing, including access to ground water, soil available phosphorus, and elevation, the effects of which were in turn correlated with winter microclimatic conditions of individual trees. Budburst timing was significantly related to both subsequent acorn production and radial growth; trees leafing out on or near the population mean for the year experienced greater radial growth and produced larger acorn crops than trees leafing out earlier or later than the mean. Differences in acorn production were due to both differences in phenology among trees and plasticity in the phenology of individual trees across years, while differences in radial growth were primarily due to plasticity in individual tree phenology. Valley oak phenology exhibits considerable variability; the extent to which this plasticity will help this keystone California species adapt to future climate change remains to be seen.</p>","language":"English","publisher":"California Botanical Society","doi":"10.3120/0024-9637-68.4.434","usgsCitation":"Koenig, W.D., Pesendorfer, M.B., Pearse, I.S., Carmen, W.J., and Knops, J., 2022, Budburst timing of valley oaks at Hastings Reservation, central coastal California: Madroño, v. 68, no. 4, p. 434-442, https://doi.org/10.3120/0024-9637-68.4.434.","productDescription":"9 p.","startPage":"434","endPage":"442","ipdsId":"IP-126302","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":449853,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3120/0024-9637-68.4.434","text":"Publisher Index Page"},{"id":404208,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","otherGeospatial":"Hastings Reservation","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -121.56818389892578,\n              36.35688657156443\n            ],\n            [\n              -121.55797004699706,\n              36.35667920260246\n            ],\n            [\n              -121.55788421630858,\n              36.364005904152066\n            ],\n            [\n              -121.53977394104004,\n              36.364144137174065\n            ],\n            [\n              -121.53925895690918,\n              36.374580021168136\n            ],\n            [\n              -121.55702590942383,\n              36.374925556297065\n            ],\n            [\n              -121.55694007873535,\n              36.378035303385445\n            ],\n            [\n              -121.5483570098877,\n              36.37810440746413\n            ],\n            [\n              -121.54818534851076,\n              36.38529089640288\n            ],\n            [\n              -121.54664039611815,\n              36.38535999403445\n            ],\n            [\n              -121.54664039611815,\n              36.389505739558835\n            ],\n            [\n              -121.54355049133302,\n              36.39268399475275\n            ],\n            [\n              -121.54355049133302,\n              36.396552999605824\n            ],\n            [\n              -121.5530776977539,\n              36.396552999605824\n            ],\n            [\n              -121.5530776977539,\n              36.38570548127127\n            ],\n            [\n              -121.56646728515624,\n              36.38591277287651\n            ],\n            [\n              -121.56638145446776,\n              36.37976288693314\n            ],\n            [\n              -121.56835556030272,\n              36.379693784328026\n            ],\n            [\n              -121.56826972961426,\n              36.37879544487418\n            ],\n            [\n              -121.57539367675781,\n              36.37893365161938\n            ],\n            [\n              -121.57556533813475,\n              36.37098636483891\n            ],\n            [\n              -121.56792640686037,\n              36.37098636483891\n            ],\n            [\n              -121.56818389892578,\n              36.35688657156443\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"68","issue":"4","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Koenig, Walter D.","contributorId":46255,"corporation":false,"usgs":false,"family":"Koenig","given":"Walter","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":847149,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Pesendorfer, Mario B.","contributorId":201187,"corporation":false,"usgs":false,"family":"Pesendorfer","given":"Mario","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":847150,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Pearse, Ian S. 0000-0001-7098-0495","orcid":"https://orcid.org/0000-0001-7098-0495","contributorId":216680,"corporation":false,"usgs":true,"family":"Pearse","given":"Ian","middleInitial":"S.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":847151,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Carmen, William J.","contributorId":293504,"corporation":false,"usgs":false,"family":"Carmen","given":"William","email":"","middleInitial":"J.","affiliations":[{"id":63318,"text":"Carmen Ecological Consulting","active":true,"usgs":false}],"preferred":false,"id":847152,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Knops, Johannes M.H.","contributorId":293505,"corporation":false,"usgs":false,"family":"Knops","given":"Johannes M.H.","affiliations":[{"id":63320,"text":"Xi’an Jiaotong Liverpool University","active":true,"usgs":false}],"preferred":false,"id":847153,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70224637,"text":"70224637 - 2022 - Tungsten skarn potential of the Yukon-Tanana Upland, eastern Alaska, USA—A mineral resource assessment","interactions":[],"lastModifiedDate":"2021-10-01T13:05:23.963158","indexId":"70224637","displayToPublicDate":"2020-11-25T08:01:27","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2302,"text":"Journal of Geochemical Exploration","active":true,"publicationSubtype":{"id":10}},"title":"Tungsten skarn potential of the Yukon-Tanana Upland, eastern Alaska, USA—A mineral resource assessment","docAbstract":"<p id=\"sp0130\"><span>Tungsten&nbsp;(W) is used in a variety of industrial and technological applications and has been identified as a critical mineral for the United States, India, the European Union, and other countries. These countries rely on W imports mostly from China, which leaves them vulnerable to supply disruption. Consequently, the&nbsp;U.S.&nbsp;government has a current initiative to understand domestic resource potential. The eastern Alaska portion of the Yukon-Tanana Upland (YTU), is prospective for W&nbsp;skarn&nbsp;deposits, the major source of global W supply. The&nbsp;regional geology&nbsp;consists of juxtaposed&nbsp;Paleozoic&nbsp;lithotectonic packages that were reaccreted to North America in the&nbsp;</span>Mesozoic<span>. Multiple subsequent episodes of arc-related&nbsp;magmatism&nbsp;intruded the lithotectonic packages, accompanied by W skarn formation mostly associated with 100–90 Ma intrusions; major W skarn deposits in Canada are part of the same metallogenic event (e.g., Mactung, Cantung). In this paper, we present an assessment for undiscovered W skarn resources for parts of the lesser-explored western (Alaskan) portion of the YTU.</span></p><p id=\"sp1130\"><span>We used GIS proximity analysis to map the intersection of&nbsp;pluton&nbsp;and carbonate-bearing rocks to define three permissive tracts for W skarn deposits. The permissive tracts were qualitatively assessed by mineral potential mapping using region-wide sediment&nbsp;geochemistry&nbsp;and mineral concentrate datasets. This analysis showed that much of the western YTU has high potential for undiscovered W skarn deposits, whereas the eastern and southern YTU had only isolated areas of medium to high potential. Historical production and the quality of the geochemistry data of the western YTU tract (ca. 9200 km</span><sup>2</sup><span>) permitted a quantitative assessment of undiscovered W resources. Probabilistic estimates by a panel of 20 experts predicted a 70% chance of one to three undiscovered W skarn deposits in the western YTU tract. The rationale for favorability employed by the expert panel included favorable&nbsp;lithology, previous production, clustering of previously mined deposits, W placers in the area, lack of recent exploration, pan concentrates containing W minerals, and W geochemical anomalies. Estimates were combined with a global grade and tonnage model for W skarns in a Monte Carlo simulation and provided a median estimate of undiscovered resources of 94 kt WO</span><sub>3</sub>. If the undiscovered W skarn deposits are located close to infrastructure (e.g., near Fairbanks, or close to roads and/or power grid), application of an economic filter indicates that the median total economically recoverable WO<sub>3</sub><span>&nbsp;</span>is 63 kt with a net present value (NPV) of $330 million USD (2008 dollars). Whereas if deposits are far from infrastructure, median recoverable WO<sub>3</sub><span>&nbsp;</span>is only 30 kt and the NPV is $44 million.</p><p id=\"sp2130\">Our models for contained WO<sub>3</sub><span>&nbsp;resources and NPV estimates for the western YTU tract are considerably lower than the known resources in skarns in adjacent areas in Canada. Estimates for the western YTU are also lower than preliminary estimates for undiscovered W skarn deposits in areas of the western conterminous United States. We speculate that lower permeability and continuity of favorable&nbsp;carbonate rock&nbsp;horizons in the relatively higher-grade metamorphic country rocks in the Alaska portion of the YTU may explain some of the differences in prospectivity. More detailed geologic mapping, modern geochemistry, and&nbsp;geophysical surveys&nbsp;are needed to refine the resource potential of the whole YTU. Regardless, quantitative&nbsp;mineral resource&nbsp;assessment provides a useful tool for making first-order regional estimates of undiscovered resources, identifying target areas for new data acquisition, and guiding research on the fundamental controls of district-scale metallogenic endowments.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.gexplo.2020.106700","usgsCitation":"Case, G.N., Graham, G.E., Marsh, E.E., Taylor, R., Green, C.J., Brown, P.J., and Labay, K.A., 2022, Tungsten skarn potential of the Yukon-Tanana Upland, eastern Alaska, USA—A mineral resource assessment: Journal of Geochemical Exploration, v. 232, 106700, 21 p., https://doi.org/10.1016/j.gexplo.2020.106700.","productDescription":"106700, 21 p.","ipdsId":"IP-119358","costCenters":[{"id":119,"text":"Alaska Science Center Geology Minerals","active":true,"usgs":true},{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true},{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":449855,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.gexplo.2020.106700","text":"Publisher Index Page"},{"id":436068,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9TDKQE4","text":"USGS data release","linkHelpText":"Qualitative Mineral Potential Map of Tungsten Skarn in the Yukon-Tanana Uplands, Eastern Alaska, USA, 2021"},{"id":390107,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -154.3359375,\n              63.35212928507874\n            ],\n            [\n              -141.240234375,\n              63.35212928507874\n            ],\n            [\n              -141.240234375,\n              67.23806155909902\n            ],\n            [\n              -154.3359375,\n              67.23806155909902\n            ],\n            [\n              -154.3359375,\n              63.35212928507874\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"232","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Case, George N.D. 0000-0001-9826-5661 gcase@usgs.gov","orcid":"https://orcid.org/0000-0001-9826-5661","contributorId":224941,"corporation":false,"usgs":true,"family":"Case","given":"George","email":"gcase@usgs.gov","middleInitial":"N.D.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":824473,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Graham, Garth E. 0000-0003-0657-0365 ggraham@usgs.gov","orcid":"https://orcid.org/0000-0003-0657-0365","contributorId":1031,"corporation":false,"usgs":true,"family":"Graham","given":"Garth","email":"ggraham@usgs.gov","middleInitial":"E.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true},{"id":35995,"text":"Geology, Geophysics, and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":824474,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Marsh, Erin E. 0000-0001-5245-9532 emarsh@usgs.gov","orcid":"https://orcid.org/0000-0001-5245-9532","contributorId":1250,"corporation":false,"usgs":true,"family":"Marsh","given":"Erin","email":"emarsh@usgs.gov","middleInitial":"E.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824475,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Taylor, Ryan D. 0000-0002-8845-5290","orcid":"https://orcid.org/0000-0002-8845-5290","contributorId":201948,"corporation":false,"usgs":true,"family":"Taylor","given":"Ryan D.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824476,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Green, Carlin J. 0000-0002-6557-6268 cjgreen@usgs.gov","orcid":"https://orcid.org/0000-0002-6557-6268","contributorId":193013,"corporation":false,"usgs":true,"family":"Green","given":"Carlin","email":"cjgreen@usgs.gov","middleInitial":"J.","affiliations":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824528,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Brown, Philip J. 0000-0002-2415-7462 pbrown@usgs.gov","orcid":"https://orcid.org/0000-0002-2415-7462","contributorId":759,"corporation":false,"usgs":true,"family":"Brown","given":"Philip","email":"pbrown@usgs.gov","middleInitial":"J.","affiliations":[{"id":309,"text":"Geology and Geophysics Science Center","active":true,"usgs":true},{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":824477,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Labay, Keith A. 0000-0002-6763-3190 klabay@usgs.gov","orcid":"https://orcid.org/0000-0002-6763-3190","contributorId":217714,"corporation":false,"usgs":true,"family":"Labay","given":"Keith","email":"klabay@usgs.gov","middleInitial":"A.","affiliations":[{"id":119,"text":"Alaska Science Center Geology Minerals","active":true,"usgs":true}],"preferred":true,"id":824478,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70216361,"text":"70216361 - 2022 - Identifying turbulence features hindering swimming capabilities of grass carp larvae (Ctenopharyngodon idella) through submerged vegetation","interactions":[],"lastModifiedDate":"2022-03-28T15:21:31.846619","indexId":"70216361","displayToPublicDate":"2020-11-10T09:05:26","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5513,"text":"Journal of Ecohydraulics","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Identifying turbulence features hindering swimming capabilities of grass carp larvae (<i>Ctenopharyngodon idella</i>) through submerged vegetation","title":"Identifying turbulence features hindering swimming capabilities of grass carp larvae (Ctenopharyngodon idella) through submerged vegetation","docAbstract":"<div class=\"hlFld-Abstract\"><div class=\"abstractSection abstractInFull\"><p>Aquatic vegetation can provide habitat and refuge for a variety of species in streams. However, the flow features generated by submerged patches of vegetation can also pose a challenge for fish larvae. We conducted a series of experiments with live grass carp larvae (starting ∼50 h post hatch) in a laboratory racetrack flume, using a submerged array of rigid cylinders to mimic vegetation. We used particle image velocimetry to characterize the flow field, and particle tracking velocimetry to obtain position and displacement of the fish. Four speeds and two submergence ratios were investigated. In contrast with previous studies with grass carp eggs, our data showed an active response from larvae to determine their position. Our study shows that: (1) mean velocity by itself is not a reliable predictor, as some larvae will seemingly prefer to be in areas of higher speeds with lower shear and turbulence, (2) turbulence characteristics can be used to identify areas avoided by larvae, (3) turbulence length scales are relevant to determine spatial distribution of larvae and their swimming capabilities within and above vegetated patches and similar roughness elements in streams. These findings can inform the design of monitoring and control strategies in rivers based on turbulence and turbulence scales generated by natural and man-made instream structures.</p></div></div>","language":"English","publisher":"Taylor and Francis","doi":"10.1080/24705357.2020.1835566","usgsCitation":"Tinoco, R.O., Prada, A.F., George, A.E., Stahlschmidt, B.H., Jackson, P.R., and Chapman, D., 2022, Identifying turbulence features hindering swimming capabilities of grass carp larvae (Ctenopharyngodon idella) through submerged vegetation: Journal of Ecohydraulics, v. 7, no. 1, p. 4-16, https://doi.org/10.1080/24705357.2020.1835566.","productDescription":"13 p.","startPage":"4","endPage":"16","ipdsId":"IP-120184","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":449857,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/24705357.2020.1835566","text":"Publisher Index Page"},{"id":436069,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9P81CUX","text":"USGS data release","linkHelpText":"Swimming speeds of grass carp in response to turbulence"},{"id":380505,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"7","issue":"1","noUsgsAuthors":false,"publicationDate":"2020-11-10","publicationStatus":"PW","contributors":{"authors":[{"text":"Tinoco, Rafael O.","contributorId":211779,"corporation":false,"usgs":false,"family":"Tinoco","given":"Rafael","email":"","middleInitial":"O.","affiliations":[{"id":38317,"text":"Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL","active":true,"usgs":false}],"preferred":false,"id":804803,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Prada, Andres F.","contributorId":211778,"corporation":false,"usgs":false,"family":"Prada","given":"Andres","email":"","middleInitial":"F.","affiliations":[{"id":38317,"text":"Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL","active":true,"usgs":false}],"preferred":false,"id":804804,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"George, Amy E. 0000-0003-1150-8646 ageorge@usgs.gov","orcid":"https://orcid.org/0000-0003-1150-8646","contributorId":3950,"corporation":false,"usgs":true,"family":"George","given":"Amy","email":"ageorge@usgs.gov","middleInitial":"E.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":804805,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Stahlschmidt, Benjamin H. 0000-0001-6197-662X","orcid":"https://orcid.org/0000-0001-6197-662X","contributorId":211250,"corporation":false,"usgs":true,"family":"Stahlschmidt","given":"Benjamin","email":"","middleInitial":"H.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":804806,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Jackson, P. Ryan 0000-0002-3154-6108 pjackson@usgs.gov","orcid":"https://orcid.org/0000-0002-3154-6108","contributorId":194529,"corporation":false,"usgs":true,"family":"Jackson","given":"P.","email":"pjackson@usgs.gov","middleInitial":"Ryan","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true},{"id":35680,"text":"Illinois-Iowa-Missouri Water Science Center","active":true,"usgs":true},{"id":344,"text":"Illinois Water Science Center","active":true,"usgs":true}],"preferred":true,"id":804807,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Chapman, Duane 0000-0002-1086-8853 dchapman@usgs.gov","orcid":"https://orcid.org/0000-0002-1086-8853","contributorId":1291,"corporation":false,"usgs":true,"family":"Chapman","given":"Duane","email":"dchapman@usgs.gov","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true},{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":804808,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70232999,"text":"70232999 - 2022 - Diagenesis of Vera Rubin ridge, Gale crater, Mars from Mastcam multispectral images","interactions":[],"lastModifiedDate":"2022-07-15T14:02:52.557747","indexId":"70232999","displayToPublicDate":"2020-11-01T08:44:33","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":9967,"text":"JGR Planets","active":true,"publicationSubtype":{"id":10}},"title":"Diagenesis of Vera Rubin ridge, Gale crater, Mars from Mastcam multispectral images","docAbstract":"<p>Images from the Mars Science Laboratory (MSL) mission of lacustrine sedimentary rocks of Vera Rubin ridge on “Mt. Sharp” in Gale crater, Mars, have shown stark color variations from red to purple to gray. These color differences crosscut stratigraphy and are likely due to diagenetic alteration of the sediments after deposition. However, the chemistry and timing of these fluid interactions is unclear. Determining how diagenetic processes may have modified chemical and mineralogical signatures of ancient Martian environments is critical for understanding the past habitability of Mars and achieving the goals of the MSL mission. Here we use visible/near-infrared spectra from Mastcam and ChemCam to determine the mineralogical origins of color variations in the ridge. Color variations are consistent with changes in spectral properties related to the crystallinity, grain size, and texture of hematite. Coarse-grained gray hematite spectrally dominates in the gray patches and is present in the purple areas, while nanophase and fine-grained red crystalline hematite are present and spectrally dominate in the red and purple areas. We hypothesize that these differences were caused by grain-size coarsening of hematite by diagenetic fluids, as observed in terrestrial analogs. In this model, early primary reddening by oxidizing fluids near the surface was followed during or after burial by bleaching to form the gray patches, possibly with limited secondary reddening after exhumation. Diagenetic alteration may have diminished the preservation of biosignatures and changed the composition of the sediments, making it more difficult to interpret how conditions evolved in the paleolake over time.</p>","language":"English","publisher":"AGU","doi":"10.1029/2019JE006322","usgsCitation":"Horgan, B.H., Johnson, J., Fraeman, A.A., Rice, M., Seeger, C., Bell, J., Bennett, K.A., Cloutis, E., Edgar, L.A., Frydenvang, J., Grotzinger, J.P., L’Haridon, J., Jacob, S., Mangold, N., Rampe, E.B., Rivera-Hernandez, F., Sun, V.Z., Thompson, L., and Wellington, D., 2022, Diagenesis of Vera Rubin ridge, Gale crater, Mars from Mastcam multispectral images: JGR Planets, v. 125, no. 11, e2019JE006322, 33 p., https://doi.org/10.1029/2019JE006322.","productDescription":"e2019JE006322, 33 p.","ipdsId":"IP-122293","costCenters":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"links":[{"id":449866,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2019je006322","text":"Publisher Index Page"},{"id":403787,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"otherGeospatial":"Gale crater, Mars, Mt. Sharp, Vera Rubin ridge","volume":"125","issue":"11","noUsgsAuthors":false,"publicationDate":"2020-10-31","publicationStatus":"PW","contributors":{"authors":[{"text":"Horgan, Briony H. N. 0000-0001-6314-9724","orcid":"https://orcid.org/0000-0001-6314-9724","contributorId":258276,"corporation":false,"usgs":false,"family":"Horgan","given":"Briony","email":"","middleInitial":"H. 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,{"id":70229974,"text":"70229974 - 2022 - Condition of resident fish communities in the Eighteenmile Creek Area of Concern, New York","interactions":[],"lastModifiedDate":"2022-03-22T14:18:22.544128","indexId":"70229974","displayToPublicDate":"2020-10-24T09:12:32","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2330,"text":"Journal of Great Lakes Research","active":true,"publicationSubtype":{"id":10}},"title":"Condition of resident fish communities in the Eighteenmile Creek Area of Concern, New York","docAbstract":"<p><span>The lower 3.5&nbsp;km of Eighteenmile Creek, a tributary to Lake Ontario in New York, was designated as an Area of Concern (AOC) in 1985 under the Great Lakes Water Quality Agreement due to extensive contamination of bed sediments by polychlorinated biphenyls (PCBs) and other toxicants. Five beneficial use impairments (BUIs) have been identified in this AOC, including degraded fish and wildlife populations. We surveyed fish communities in the Eighteenmile Creek AOC and in a comparable section of a nearby reference stream (Oak Orchard Creek) during June 2019 to infer whether legacy contaminants are currently impairing fish communities in the AOC to an extent that they differ from the regional reference condition. Estimates of community abundance, biomass, diversity, and fish condition from each system were compared using a noninferiority testing framework. Biomass, diversity, and fish condition in the Eighteenmile Creek AOC were similar or superior to that in Oak Orchard Creek, while abundance was 20% lower in the AOC. These findings and those of a 2007 sampling effort suggest that fish communities in the Eighteenmile Creek AOC are not impaired despite recent studies indicating that PCBs are bioaccumulating in fish tissues at 1–2 orders of magnitude above background levels. Future assessments in the Eighteenmile Creek AOC might focus on the condition of benthic&nbsp;</span>macroinvertebrate<span>&nbsp;communities and potential toxicity of local contaminants to piscivorous wildlife in order to fully address the remaining aspects of the fish and wildlife populations beneficial use impairment.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jglr.2020.10.003","usgsCitation":"George, S.D., Baldigo, B., Collins, S.F., Clarke, D., and Winterhalter, D., 2022, Condition of resident fish communities in the Eighteenmile Creek Area of Concern, New York: Journal of Great Lakes Research, v. 48, no. 2, p. 404-411, https://doi.org/10.1016/j.jglr.2020.10.003.","productDescription":"4 p.","startPage":"404","endPage":"411","ipdsId":"IP-114543","costCenters":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"links":[{"id":449869,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.jglr.2020.10.003","text":"Publisher Index Page"},{"id":397394,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"New York","otherGeospatial":"Eighteenmile Creek Area of Concern, Oak Orchard Creek","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -78.75961303710938,\n              43.26120612479979\n            ],\n            [\n              -78.6785888671875,\n              43.26120612479979\n            ],\n            [\n              -78.6785888671875,\n              43.36612409315009\n            ],\n            [\n              -78.75961303710938,\n              43.36612409315009\n            ],\n            [\n              -78.75961303710938,\n              43.26120612479979\n            ]\n          ]\n        ]\n      }\n    },\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -78.24359893798828,\n              43.326925957023846\n            ],\n            [\n              -78.17493438720703,\n              43.326925957023846\n            ],\n            [\n              -78.17493438720703,\n              43.37460952707158\n            ],\n            [\n              -78.24359893798828,\n              43.37460952707158\n            ],\n            [\n              -78.24359893798828,\n              43.326925957023846\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"48","issue":"2","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"George, Scott D. 0000-0002-8197-1866 sgeorge@usgs.gov","orcid":"https://orcid.org/0000-0002-8197-1866","contributorId":3014,"corporation":false,"usgs":true,"family":"George","given":"Scott","email":"sgeorge@usgs.gov","middleInitial":"D.","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":838542,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Baldigo, Barry P. 0000-0002-9862-9119","orcid":"https://orcid.org/0000-0002-9862-9119","contributorId":25174,"corporation":false,"usgs":true,"family":"Baldigo","given":"Barry P.","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":838543,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Collins, Scott F.","contributorId":172292,"corporation":false,"usgs":false,"family":"Collins","given":"Scott","email":"","middleInitial":"F.","affiliations":[],"preferred":false,"id":838544,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Clarke, David","contributorId":289100,"corporation":false,"usgs":false,"family":"Clarke","given":"David","affiliations":[{"id":13678,"text":"New York State Department of Environmental Conservation","active":true,"usgs":false}],"preferred":false,"id":838545,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Winterhalter, Dylan R. 0000-0003-1774-8034","orcid":"https://orcid.org/0000-0003-1774-8034","contributorId":251765,"corporation":false,"usgs":true,"family":"Winterhalter","given":"Dylan R.","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":838546,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70229117,"text":"70229117 - 2022 - Novel circoviruses detected in feces of Sonoran felids","interactions":[],"lastModifiedDate":"2022-03-02T12:10:44.33026","indexId":"70229117","displayToPublicDate":"2020-09-30T18:38:09","publicationYear":"2022","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3700,"text":"Viruses","active":true,"publicationSubtype":{"id":10}},"title":"Novel circoviruses detected in feces of Sonoran felids","docAbstract":"<p><span>Sonoran felids are threatened by drought and habitat fragmentation. Vector range expansion and anthropogenic factors such as habitat encroachment and climate change are altering viral evolutionary dynamics and exposure. However, little is known about the diversity of viruses present in these populations. Small felid populations with lower genetic diversity are likely to be most threatened with extinction by emerging diseases, as with other selective pressures, due to having less adaptive potential. We used a metagenomic approach to identify novel circoviruses, which may have a negative impact on the population viability, from confirmed bobcat (</span><span class=\"html-italic\">Lynx rufus</span><span>) and puma (</span><span class=\"html-italic\">Puma concolor</span><span>) scats collected in Sonora, Mexico. Given some circoviruses are known to cause disease in their hosts, such as porcine and avian circoviruses, we took a non-invasive approach using scat to identify circoviruses in free-roaming bobcats and puma. Three circovirus genomes were determined, and, based on the current species demarcation, they represent two novel species. Phylogenetic analyses reveal that one circovirus species is more closely related to rodent associated circoviruses and the other to bat associated circoviruses, sharing highest genome-wide pairwise identity of approximately 70% and 63%, respectively. At this time, it is unknown whether these scat-derived circoviruses infect felids, their prey, or another organism that might have had contact with the scat in the environment. Further studies should be conducted to elucidate the host of these viruses and assess health impacts in felids</span></p>","language":"English","publisher":"Elsevier","doi":"10.3390/v12091027","usgsCitation":"Payne, N., Kraberger, S., Fontenele, R., Schmidlin, K., Bergeman, M.H., Cassaigne, I., Culver, M., Varsani, A., and Van Doorslaer, K., 2022, Novel circoviruses detected in feces of Sonoran felids: Viruses, v. 12, no. 9, 1027. 9 p., https://doi.org/10.3390/v12091027.","productDescription":"1027. 9 p.","ipdsId":"IP-122664","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":449871,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3390/v12091027","text":"Publisher Index Page"},{"id":396618,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Mexico","otherGeospatial":"Sonoran Desert","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -114.23583984374999,\n              31.11879439598953\n            ],\n            [\n              -112.60986328125,\n              31.11879439598953\n            ],\n            [\n              -112.60986328125,\n              32.24997445586331\n            ],\n            [\n              -114.23583984374999,\n              32.24997445586331\n            ],\n            [\n              -114.23583984374999,\n              31.11879439598953\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"12","issue":"9","noUsgsAuthors":false,"publicationDate":"2020-09-15","publicationStatus":"PW","contributors":{"authors":[{"text":"Payne, Natalie","contributorId":287191,"corporation":false,"usgs":false,"family":"Payne","given":"Natalie","email":"","affiliations":[{"id":40855,"text":"UA","active":true,"usgs":false}],"preferred":false,"id":836553,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kraberger, Simona","contributorId":287192,"corporation":false,"usgs":false,"family":"Kraberger","given":"Simona","affiliations":[{"id":12431,"text":"ASU","active":true,"usgs":false}],"preferred":false,"id":836554,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Fontenele, Rafaela S.","contributorId":287193,"corporation":false,"usgs":false,"family":"Fontenele","given":"Rafaela S.","affiliations":[{"id":12431,"text":"ASU","active":true,"usgs":false}],"preferred":false,"id":836555,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Schmidlin, Kara","contributorId":287194,"corporation":false,"usgs":false,"family":"Schmidlin","given":"Kara","affiliations":[{"id":12431,"text":"ASU","active":true,"usgs":false}],"preferred":false,"id":836556,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Bergeman, Melissa H.","contributorId":287195,"corporation":false,"usgs":false,"family":"Bergeman","given":"Melissa","email":"","middleInitial":"H.","affiliations":[{"id":40855,"text":"UA","active":true,"usgs":false}],"preferred":false,"id":836557,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Cassaigne, Ivonne","contributorId":287196,"corporation":false,"usgs":false,"family":"Cassaigne","given":"Ivonne","affiliations":[{"id":61499,"text":"pc","active":true,"usgs":false}],"preferred":false,"id":836558,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Culver, Melanie 0000-0001-5380-3059 mculver@usgs.gov","orcid":"https://orcid.org/0000-0001-5380-3059","contributorId":197693,"corporation":false,"usgs":true,"family":"Culver","given":"Melanie","email":"mculver@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":836552,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Varsani, Arvind","contributorId":287197,"corporation":false,"usgs":false,"family":"Varsani","given":"Arvind","affiliations":[{"id":12431,"text":"ASU","active":true,"usgs":false}],"preferred":false,"id":836559,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Van Doorslaer, Koenraad","contributorId":287199,"corporation":false,"usgs":false,"family":"Van Doorslaer","given":"Koenraad","affiliations":[{"id":40855,"text":"UA","active":true,"usgs":false}],"preferred":false,"id":836560,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
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