{"pageNumber":"455","pageRowStart":"11350","pageSize":"25","recordCount":184617,"records":[{"id":70226660,"text":"70226660 - 2021 - Accuracy of flowmeters measuring horizontal flow in fractured-rock simulators","interactions":[],"lastModifiedDate":"2021-12-02T16:33:07.928752","indexId":"70226660","displayToPublicDate":"2021-09-30T10:29:34","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1866,"text":"Groundwater Monitoring & Remediation","active":true,"publicationSubtype":{"id":10}},"title":"Accuracy of flowmeters measuring horizontal flow in fractured-rock simulators","docAbstract":"<div class=\"abstract-group\"><div class=\"article-section__content en main\"><p>Laboratory evaluations of flowmeter response to flow in fractured-rock simulators are needed to improve understanding of data collected in field settings. The ability of flowmeters to accurately measure the velocity and direction of water flowing between parallel plates was used as a surrogate for instrument response in fractured-rock aquifers. A colloidal borescope flowmeter and a heat-pulse flowmeter were deployed in a fractured rock simulator with 4-inch and 6-inch inner-diameter, uncased wells with 0.39- and 1.0-inch fracture apertures and groundwater velocities from 35 to 975 ft/d. The colloidal borescope measurements and applied velocities were positively correlated in all wells and apertures (the coefficient of determination [<i>r</i><sup>2</sup>]&nbsp;=&nbsp;0.61–0.89) and most accurately measured direction at higher velocities. The mean directional error in colloidal borescope measurements was less than 17° in 6-inch wells and 31° in the 4-inch wells at velocities between 92 and 958 ft/d. Heat-pulse flowmeter measurements were 0.001 to 0.004 times less than applied rates and may indicate that water was moving around rather than through the instrument's integrated packer. The mean directional error of heat-pulse flowmeter measurements were about 18 and 42° in the 0.39- and 1.0-inch fractures, respectively, for groundwater velocities within the manufacturer's suggested range of application (0.5–100 ft/d). Measurements made at vertical increments and fracture positions in the well using the colloidal borescope indicate that laminar flow occurs within the central 50% of the fracture but measurements above or below are likely affected by eddy currents.</p></div></div>","language":"English","publisher":"National Groundwater Association","doi":"10.1111/gwmr.12482","usgsCitation":"Bayless, E.R., 2021, Accuracy of flowmeters measuring horizontal flow in fractured-rock simulators: Groundwater Monitoring & Remediation, v. 41, no. 4, p. 50-61, https://doi.org/10.1111/gwmr.12482.","productDescription":"12 p.","startPage":"50","endPage":"61","ipdsId":"IP-080870","costCenters":[{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true}],"links":[{"id":436177,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9IF9JH8","text":"USGS data release","linkHelpText":"Laboratory Assessment of Colloidal Borescope and Heat-Pulse Flowmeters in Measuring Horizontal Flow in Fractured-Rock Simulators"},{"id":392383,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"41","issue":"4","noUsgsAuthors":false,"publicationDate":"2021-10-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Bayless, E. Randall 0000-0002-0357-3635","orcid":"https://orcid.org/0000-0002-0357-3635","contributorId":42586,"corporation":false,"usgs":true,"family":"Bayless","given":"E.","email":"","middleInitial":"Randall","affiliations":[{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true}],"preferred":true,"id":827604,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70256767,"text":"70256767 - 2021 - Floodplain forest tree seedling response to variation in flood timing and duration","interactions":[],"lastModifiedDate":"2024-09-06T15:25:58.126396","indexId":"70256767","displayToPublicDate":"2021-09-30T10:22:59","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1687,"text":"Forest Ecology and Management","active":true,"publicationSubtype":{"id":10}},"title":"Floodplain forest tree seedling response to variation in flood timing and duration","docAbstract":"<p><span>The regeneration process is a sensitive period within life cycles of&nbsp;floodplain&nbsp;tree species and can strongly influence forest community composition. Yet, fundamental information remains limited on the relationship between regeneration processes and the flood disturbances that, together, construct&nbsp;floodplain&nbsp;forest landscapes. In a controlled greenhouse experiment we tested the effects of complete&nbsp;submergence&nbsp;on six temperate floodplain forest species to understand how flood timing and duration influence seedling survival. Groups of overcup&nbsp;oak&nbsp;(</span><i>Quercus lyrata</i><span>), Nuttall&nbsp;oak&nbsp;(</span><i>Quercus texana</i><span>), willow oak (</span><i>Quercus phellos</i><span>), sugarberry (</span><i>Celtis laevigata</i><span>),&nbsp;green ash&nbsp;(</span><i>Fraxinus pennsylvanica</i><span>), and&nbsp;American elm&nbsp;(</span><i>Ulmus americana</i><span>) seedlings were submerged for either 5, 15, 25, or 0&nbsp;days (control) at the ages of 3-weeks, 6-weeks, and 9-weeks post-emergence. All species demonstrated a higher sensitivity to flooding at age 3-weeks compared to 6- and 9- weeks, indicating substantial changes in seedling resilience within the first months following emergence. Additionally, the heavier-seeded&nbsp;</span><i>Q. lyrata</i><span>,&nbsp;</span><i>Q. texana,</i><span>&nbsp;and&nbsp;</span><i>Q. phellos</i><span>&nbsp;were less or equally vulnerable to flooding compared to the lighter-seeded&nbsp;</span><i>C. laevigata, F. pennsylvanica,</i><span>&nbsp;and&nbsp;</span><i>U. americana</i><span>&nbsp;across all age groups, especially at 3-weeks post-emergence. The results of this study have implications for understanding woody species regeneration ecology and changes in floodplain forest composition, particularly in the context of hydrologic modifications.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.foreco.2021.119660","usgsCitation":"Kroschel, W., and King, S.L., 2021, Floodplain forest tree seedling response to variation in flood timing and duration: Forest Ecology and Management, v. 502, 119660, 10 p., https://doi.org/10.1016/j.foreco.2021.119660.","productDescription":"119660, 10 p.","ipdsId":"IP-127728","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":433558,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"502","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Kroschel, W.A.","contributorId":341796,"corporation":false,"usgs":false,"family":"Kroschel","given":"W.A.","email":"","affiliations":[{"id":5115,"text":"Louisiana State University","active":true,"usgs":false}],"preferred":false,"id":908901,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"King, Sammy L. 0000-0002-5364-6361 sking@usgs.gov","orcid":"https://orcid.org/0000-0002-5364-6361","contributorId":557,"corporation":false,"usgs":true,"family":"King","given":"Sammy","email":"sking@usgs.gov","middleInitial":"L.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":908902,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70230396,"text":"70230396 - 2021 - Strategic considerations for invasive species managers in the utilization of environmental DNA (eDNA): Steps for incorporating this powerful surveillance tool","interactions":[],"lastModifiedDate":"2022-04-12T11:09:56.160523","indexId":"70230396","displayToPublicDate":"2021-09-30T10:14:55","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2655,"text":"Management of Biological Invasions","active":true,"publicationSubtype":{"id":10}},"title":"Strategic considerations for invasive species managers in the utilization of environmental DNA (eDNA): Steps for incorporating this powerful surveillance tool","docAbstract":"<p><span>Invasive species surveillance programs can utilize environmental DNA sampling and analysis to provide information on the presence of invasive species. Wider utilization of eDNA techniques for invasive species surveillance may be warranted. This paper covers topics directed towards invasive species managers and eDNA practitioners working at the intersection of eDNA techniques and invasive species surveillance. It provides background information on the utility of eDNA for invasive species management and points to various examples of its use across federal and international programs. It provides information on 1) why an invasive species manager should consider using eDNA, 2) deciding if eDNA can help with the manager’s surveillance needs, 3) important components to operational implementation, and 4) a high-level overview of the technical steps necessary for eDNA analysis. The goal of this paper is to assist invasive species managers in deciding if, when, and how to use eDNA for surveillance. If eDNA use is elected, the paper provides guidance on steps to ensure a clear understanding of the strengths and limitation of the methods and how results can be best utilized in the context of invasive species surveillance.</span></p>","language":"English","publisher":"Regional Euro-Asian Biological Invasions Centre","doi":"10.3391/mbi.2021.12.3.15","usgsCitation":"Morisette, J., Burgiel, S., Brantley, K., Daniel, W., Darling, J., Davis, J., Franklin, T.W., Gaddis, K., Hunter, M., Lance, R., Leskey, T., Passamaneck, Y., Piaggio, A.J., Rector, B., Sepulveda, A., Smith, M., Stepien, C.A., and Wilcox, T., 2021, Strategic considerations for invasive species managers in the utilization of environmental DNA (eDNA): Steps for incorporating this powerful surveillance tool: Management of Biological Invasions, v. 12, no. 3, p. 747-775, https://doi.org/10.3391/mbi.2021.12.3.15.","productDescription":"29 p.","startPage":"747","endPage":"775","ipdsId":"IP-130309","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":450606,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3391/mbi.2021.12.3.15","text":"Publisher Index Page"},{"id":398483,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"12","issue":"3","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Morisette, Jeffrey 0000-0002-0483-0082","orcid":"https://orcid.org/0000-0002-0483-0082","contributorId":212187,"corporation":false,"usgs":false,"family":"Morisette","given":"Jeffrey","affiliations":[{"id":38451,"text":"U.S. Department of the Interior, National Invasive Species Council Secretariat","active":true,"usgs":false}],"preferred":false,"id":840283,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Burgiel, Stanley","contributorId":270014,"corporation":false,"usgs":false,"family":"Burgiel","given":"Stanley","affiliations":[],"preferred":false,"id":840284,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Brantley, Kelsey","contributorId":270015,"corporation":false,"usgs":false,"family":"Brantley","given":"Kelsey","email":"","affiliations":[],"preferred":false,"id":840285,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Daniel, Wesley M. 0000-0002-7656-8474","orcid":"https://orcid.org/0000-0002-7656-8474","contributorId":222919,"corporation":false,"usgs":true,"family":"Daniel","given":"Wesley M.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":840286,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Darling, John","contributorId":260856,"corporation":false,"usgs":false,"family":"Darling","given":"John","affiliations":[{"id":37230,"text":"EPA","active":true,"usgs":false}],"preferred":false,"id":840287,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Davis, Jeanette","contributorId":270018,"corporation":false,"usgs":false,"family":"Davis","given":"Jeanette","email":"","affiliations":[],"preferred":false,"id":840288,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Franklin, Thomas W.","contributorId":207966,"corporation":false,"usgs":false,"family":"Franklin","given":"Thomas","email":"","middleInitial":"W.","affiliations":[{"id":37672,"text":"1United States Department of Agriculture, Forest Service, National Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, 800 East Beckwith Ave., Missoula, MT","active":true,"usgs":false}],"preferred":false,"id":840289,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Gaddis, Keith","contributorId":270020,"corporation":false,"usgs":false,"family":"Gaddis","given":"Keith","email":"","affiliations":[],"preferred":false,"id":840290,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Hunter, Margaret 0000-0002-4760-9302","orcid":"https://orcid.org/0000-0002-4760-9302","contributorId":214958,"corporation":false,"usgs":true,"family":"Hunter","given":"Margaret","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":840291,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Lance, Richard","contributorId":116452,"corporation":false,"usgs":false,"family":"Lance","given":"Richard","affiliations":[{"id":12620,"text":"U.S. Army Corp. of Engineers","active":true,"usgs":false}],"preferred":false,"id":840292,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Leskey, Tracy","contributorId":270024,"corporation":false,"usgs":false,"family":"Leskey","given":"Tracy","email":"","affiliations":[],"preferred":false,"id":840293,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Passamaneck, Yale","contributorId":270026,"corporation":false,"usgs":false,"family":"Passamaneck","given":"Yale","affiliations":[],"preferred":false,"id":840294,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Piaggio, Antoinette J.","contributorId":174782,"corporation":false,"usgs":false,"family":"Piaggio","given":"Antoinette","email":"","middleInitial":"J.","affiliations":[{"id":12434,"text":"USDA, Wildlife Services, National Wildlife Research Center","active":true,"usgs":false}],"preferred":false,"id":840295,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Rector, Brian G.","contributorId":270028,"corporation":false,"usgs":false,"family":"Rector","given":"Brian","middleInitial":"G.","affiliations":[],"preferred":false,"id":840296,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Sepulveda, Adam 0000-0001-7621-7028 asepulveda@usgs.gov","orcid":"https://orcid.org/0000-0001-7621-7028","contributorId":4187,"corporation":false,"usgs":true,"family":"Sepulveda","given":"Adam","email":"asepulveda@usgs.gov","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":840297,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Smith, Melissa","contributorId":139524,"corporation":false,"usgs":false,"family":"Smith","given":"Melissa","affiliations":[{"id":12788,"text":"National Weather Service","active":true,"usgs":false}],"preferred":false,"id":840298,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Stepien, Carol A","contributorId":270031,"corporation":false,"usgs":false,"family":"Stepien","given":"Carol","email":"","middleInitial":"A","affiliations":[],"preferred":false,"id":840299,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Wilcox, Taylor","contributorId":152363,"corporation":false,"usgs":false,"family":"Wilcox","given":"Taylor","email":"","affiliations":[{"id":18916,"text":"U.S. Department of Agriculture, Forest Service, National Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, Missoula, MT 59801 USA","active":true,"usgs":false}],"preferred":false,"id":840300,"contributorType":{"id":1,"text":"Authors"},"rank":18}]}}
,{"id":70267787,"text":"70267787 - 2021 - Fire refugia in old-growth forests: Predicting habitat persistence to support land management in an era of rapid global change","interactions":[],"lastModifiedDate":"2025-06-03T14:12:39.411691","indexId":"70267787","displayToPublicDate":"2021-09-30T10:11:42","publicationYear":"2021","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":2,"text":"State or Local Government Series"},"seriesTitle":{"id":9141,"text":"Final Report","active":true,"publicationSubtype":{"id":2}},"title":"Fire refugia in old-growth forests: Predicting habitat persistence to support land management in an era of rapid global change","docAbstract":"Recent stand-replacing wildfires in late-successional and old-growth (LSOG) forests have increased land manager interest in fire refugia, which could provide vital habitat for threatened and endangered species during a time of rapid change. The overall goal of this project was to model, map, and share information essential for the conservation of LSOG forest ecosystems in the U.S. Pacific Northwest, within a diverse co-production team of state and federal land managers. We developed statistical models of contemporary (2002-2017) fire refugia, non-stand-replacing fire (NSR), and high-severity fire based on topography, fuels, fire weather, fire behavior and climate. Independent models were built for two ecoregions (Figure 1), one encompassing the Douglas-fir/western hemlock forests of the northwestern portion of our study area and the other encompassing dry-mixed conifer forests of the eastern Cascades and Klamath-Siskiyou region. We used these models to produce probability surface maps for fire refugia, NSR, and high-severity fire under low, moderate, and extreme fire weather and fire growth scenarios. These maps and associated products provide timely information about the likely persistence, change, and loss of LSOG forests under current and future climate conditions.","language":"English","publisher":"Oregon State University","usgsCitation":"Naficy, C.E., Meigs, G., Gregory, M., Davis, R., Bell, D.M., Dugger, K., Wiens, J.D., and Krawchuk, M.A., 2021, Fire refugia in old-growth forests: Predicting habitat persistence to support land management in an era of rapid global change: Final Report, 39 p.","productDescription":"39 p.","ipdsId":"IP-135786","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":489323,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://firerefugia.forestry.oregonstate.edu/findings"},{"id":489389,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California, Oregon, Washington","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -119.03230454175225,\n              48.98129296044047\n            ],\n            [\n              -123.23629505743158,\n              49.021189699759475\n            ],\n            [\n              -122.36411639022937,\n              47.53290523042941\n            ],\n            [\n              -122.735187412137,\n              48.16641453033125\n            ],\n            [\n              -124.8905678391362,\n              48.456759846434124\n            ],\n            [\n              -124.28837165472417,\n              44.57003722150395\n            ],\n            [\n              -124.68283057104817,\n              42.67310902261141\n            ],\n            [\n              -124.20999230992997,\n              41.18665658280105\n            ],\n            [\n              -124.55296007164978,\n              40.23706044199622\n            ],\n            [\n              -123.88224360324604,\n              39.64402305418474\n            ],\n            [\n              -123.79771977835343,\n              38.75178009790977\n            ],\n            [\n              -122.3664015891323,\n              37.62043867256661\n            ],\n            [\n              -120.98881658816403,\n              38.95590221404629\n            ],\n            [\n              -119.90347242862897,\n              40.51176766538154\n            ],\n            [\n              -119.03230454175225,\n              48.98129296044047\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationDate":"2021-09-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Naficy, Cameron E.","contributorId":298154,"corporation":false,"usgs":false,"family":"Naficy","given":"Cameron","email":"","middleInitial":"E.","affiliations":[{"id":6680,"text":"Oregon State University","active":true,"usgs":false}],"preferred":false,"id":938881,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Meigs, Garrett W.","contributorId":356212,"corporation":false,"usgs":false,"family":"Meigs","given":"Garrett W.","affiliations":[{"id":37093,"text":"Washington State Department of Natural Resources","active":true,"usgs":false}],"preferred":false,"id":938882,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Gregory, Matt J.","contributorId":356213,"corporation":false,"usgs":false,"family":"Gregory","given":"Matt J.","affiliations":[{"id":6680,"text":"Oregon State University","active":true,"usgs":false}],"preferred":false,"id":938883,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Davis, Ray","contributorId":356214,"corporation":false,"usgs":false,"family":"Davis","given":"Ray","affiliations":[{"id":36493,"text":"USDA Forest Service","active":true,"usgs":false}],"preferred":false,"id":938884,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Bell, David M.","contributorId":34423,"corporation":false,"usgs":true,"family":"Bell","given":"David","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":938885,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Dugger, Katie M. 0000-0002-4148-246X cdugger@usgs.gov","orcid":"https://orcid.org/0000-0002-4148-246X","contributorId":4399,"corporation":false,"usgs":true,"family":"Dugger","given":"Katie","email":"cdugger@usgs.gov","middleInitial":"M.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":938886,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Wiens, J. David 0000-0002-2020-038X jwiens@usgs.gov","orcid":"https://orcid.org/0000-0002-2020-038X","contributorId":468,"corporation":false,"usgs":true,"family":"Wiens","given":"J.","email":"jwiens@usgs.gov","middleInitial":"David","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true}],"preferred":false,"id":938887,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Krawchuk, Meg A.","contributorId":187425,"corporation":false,"usgs":false,"family":"Krawchuk","given":"Meg","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":938888,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70225594,"text":"70225594 - 2021 - Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales","interactions":[],"lastModifiedDate":"2021-10-26T14:45:49.936829","indexId":"70225594","displayToPublicDate":"2021-09-30T09:37:33","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5925,"text":"Environmental Science and Technology","active":true,"publicationSubtype":{"id":10}},"title":"Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales","docAbstract":"<p><span>Relations between spectral absorbance and fluorescence properties of water and human-associated and fecal indicator bacteria were developed for facilitating field sensor applications to estimate wastewater contamination in waterways. Leaking wastewater conveyance infrastructure commonly contaminates receiving waters. Methods to quantify such contamination can be time consuming, expensive, and often nonspecific. Human-associated bacteria are wastewater specific but require discrete sampling and laboratory analyses, introducing latency. Human sewage has fluorescence and absorbance properties different than those of natural waters. To assist real-time field sensor development, this study investigated optical properties for use as surrogates for human-associated bacteria to estimate wastewater prevalence in environmental waters. Three spatial scales were studied: Eight watershed-scale sites, five subwatershed-scale sites, and 213 storm sewers and open channels within three small watersheds (small-scale sites) were sampled (996 total samples) for optical properties, human-associated bacteria, fecal indicator bacteria, and, for selected samples, human viruses. Regression analysis indicated that bacteria concentrations could be estimated by optical properties used in existing field sensors for watershed and subwatershed scales. Human virus occurrence increased with modeled human-associated bacteria concentration, providing confidence in these regressions as surrogates for wastewater contamination. Adequate regressions were not found for small-scale sites to reliably estimate bacteria concentrations likely due to inconsistent local sanitary sewer inputs.</span></p>","language":"English","publisher":"ACS Publications","doi":"10.1021/acs.est.1c02644","usgsCitation":"Corsi, S., DeCicco, L.A., Hansen, A., Lenaker, P.L., Bergamaschi, B.A., Pellerin, B., Dila, D., Bootsma, M., Spencer, S., Borchardt, M.A., and McLellan, S.L., 2021, Optical properties of water for prediction of wastewater contamination, human-associated bacteria, and fecal indicator bacteria in surface water at three watershed scales: Environmental Science and Technology, v. 55, no. 20, p. 13770-13782, https://doi.org/10.1021/acs.est.1c02644.","productDescription":"13 p.","startPage":"13770","endPage":"13782","ipdsId":"IP-132758","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true},{"id":503,"text":"Office of Water Quality","active":true,"usgs":true},{"id":37947,"text":"Upper 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,{"id":70228198,"text":"70228198 - 2021 - Using the California Waterfowl Tracker to assess proximity of waterfowl to commercial poultry in the Central Valley of California","interactions":[],"lastModifiedDate":"2022-02-07T15:35:39.438342","indexId":"70228198","displayToPublicDate":"2021-09-30T09:30:17","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":948,"text":"Avian Diseases","active":true,"publicationSubtype":{"id":10}},"title":"Using the California Waterfowl Tracker to assess proximity of waterfowl to commercial poultry in the Central Valley of California","docAbstract":"Migratory waterfowl are the primary reservoir of avian influenza viruses (AIV) which can be spread to commercial poultry. Surveillance efforts that track the location and abundance of wild waterfowl and link those data to inform assessments of risk and sampling for AIV currently do not exist. To assist surveillance and minimize poultry exposure to AIV, here we explored the utility of remotely sensed MODerate Resolution Imaging Spectroradiometer (MODIS) satellite imagery in combination with land-based climate measurements (e.g., temperature and precipitation) to predict waterfowl location and abundance in near real-time in the California Central Valley (CCV), where both wild waterfowl and domestic poultry are densely located. Specifically, remotely collected MODIS and climate data were integrated into a previously developed Boosted Regression Tree (BRT) model to predict and visualize waterfowl distributions across the CCV. Daily model-based predictions are publicly available during the winter as part of the dynamic California Waterfowl Tracker (CWT) web-app hosted on the University of California’s Cooperative Extension webpage. In this study, we analyzed 52 days of model predictions and produced daily spatio-temporal maps of waterfowl concentrations near the 605 commercial poultry farms in the CCV during January and February of 2019. Exposure of each poultry farm to waterfowl during each day was classified as “high”, “medium”, “low”, or “none” depending on the density of waterfowl within 4 km of a farm. Results indicated that farms were at substantially greater risk of “exposure” in January, when CCV waterfowl populations peak, than in February. For example, during January, 33% (199/605) of the farms were exposed ≥ 1 day to “high” waterfowl density versus 19% (115/605) of the farms in February. In addition to demonstrating the overall variability of waterfowl location and density, these data demonstrate how remote sensing can be used to better triage AIV surveillance and biosecurity efforts via the utilization of a functional web-app based tool. The ability to leverage remote sensing is an integral advancement toward improving AIV surveillance in waterfowl in close proximity to commercial poultry. Expansion of these types of remote sensing methods linked to a user-friendly web-tool could be further developed across the continental U.S. The BRT model incorporated into the CWT reflects a first attempt to give an accurate representation of waterfowl distribution and density relative to commercial poultry.","language":"English","publisher":"American Association of Avian Pathologists","doi":"10.1637/aviandiseases-D-20-00137","usgsCitation":"Acosta, S., Kelman, T., Feirer, S., Matchett, E., Smolinsky, J.A., Pitesky, M.E., and Buler, J.J., 2021, Using the California Waterfowl Tracker to assess proximity of waterfowl to commercial poultry in the Central Valley of California: Avian Diseases, v. 65, no. 3, p. 483-492, https://doi.org/10.1637/aviandiseases-D-20-00137.","productDescription":"10 p.","startPage":"483","endPage":"492","ipdsId":"IP-125341","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":395530,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United  States","state":"California","otherGeospatial":"Central Valley of California","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.958984375,\n              40.44694705960048\n            ],\n            [\n              -122.51953124999999,\n              38.95940879245423\n            ],\n            [\n              -121.70654296874999,\n              37.54457732085582\n            ],\n            [\n              -120.08056640625,\n              35.92464453144099\n            ],\n            [\n              -119.20166015625,\n              35.15584570226544\n            ],\n            [\n              -118.43261718749999,\n              35.38904996691167\n            ],\n            [\n              -119.0478515625,\n              36.73888412439431\n            ],\n            [\n              -120.89355468749999,\n              38.238180119798635\n            ],\n            [\n              -122.3876953125,\n              40.29628651711716\n            ],\n            [\n              -122.958984375,\n              40.44694705960048\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"65","issue":"3","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Acosta, Sarai","contributorId":274842,"corporation":false,"usgs":false,"family":"Acosta","given":"Sarai","email":"","affiliations":[{"id":56669,"text":"Department of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA USA","active":true,"usgs":false}],"preferred":false,"id":833381,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kelman, Todd","contributorId":274843,"corporation":false,"usgs":false,"family":"Kelman","given":"Todd","email":"","affiliations":[{"id":56669,"text":"Department of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA USA","active":true,"usgs":false}],"preferred":false,"id":833382,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Feirer, Shane","contributorId":274844,"corporation":false,"usgs":false,"family":"Feirer","given":"Shane","email":"","affiliations":[{"id":56670,"text":"Hopland Research & Extension Center, UC-Agriculture and Natural Resources. 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,{"id":70230282,"text":"70230282 - 2021 - Genetic analysis of red lionfish Pterois volitans from Florida, USA, leads to alternative North Atlantic introduction scenarios","interactions":[],"lastModifiedDate":"2023-06-09T13:58:52.645892","indexId":"70230282","displayToPublicDate":"2021-09-30T08:45:44","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2663,"text":"Marine Ecology Progress Series","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Genetic analysis of red lionfish <i>Pterois volitans</i> from Florida, USA, leads to alternative North Atlantic introduction scenarios","title":"Genetic analysis of red lionfish Pterois volitans from Florida, USA, leads to alternative North Atlantic introduction scenarios","docAbstract":"<p><span>The red lionfish&nbsp;</span><i>Pterois volitans</i><span>&nbsp;is a successful invasive predator across the western North Atlantic, Caribbean, and Gulf of Mexico. The southeast coast of Florida (USA) has been identified as the original introduction location, but genetic analyses including Florida lionfish have yet to investigate introduction scenarios. Here, we assessed the potential lionfish invasion pathways using 1795 sequences from previously published mitochondrial D-loop sequences (n = 1558) and new samples (n = 237) from 6 locations: The Bahamas, Florida Keys, northwest Florida, North Carolina, Panamá, and southeast Florida. None of the assessed Florida lionfish (n = 394) contained the H05-H09 D-loop haplotypes found in The Bahamas, North Carolina, and Bermuda (the Northern Region), indicating that Florida was not the source for these haplotypes. Assessing the mitochondrial population structure, the Florida east coast lionfish grouped with the Caribbean/Gulf of Mexico, as opposed to the Northern Region. To further explore connectivity and invasion pathways, 14 nuclear microsatellite loci were multiplexed on lionfish collected from 15 locations (n = 394). As found in other nuclear lionfish studies, the analyses identified a lack of population structure likely due to founding effects and/or inbreeding in aquaculture brood stocks. Together, the significant haplotype differences and H01-H04 haplotypes refute Florida as the sole source of red lionfish introduction. The results of this study support alternative invasion scenarios, in which Florida was colonized as a secondary introduction site or by individuals from the Northern Region. Understanding invasive species’ population boundaries and dispersal patterns informs local control efforts and management planning for future invasive species introductions.</span></p>","language":"English","publisher":"Inter-Research Science Publisher","doi":"10.3354/meps13841","usgsCitation":"Hunter, M., Beaver, C., Johnson, N., Bors, E.K., Mignucci-Giannoni, A.A., Silliman, B.R., Buddo, D., Searle, L., and Diaz-Ferguson, E., 2021, Genetic analysis of red lionfish Pterois volitans from Florida, USA, leads to alternative North Atlantic introduction scenarios: Marine Ecology Progress Series, v. 675, p. 133-151, https://doi.org/10.3354/meps13841.","productDescription":"19 p.; Data Release","startPage":"133","endPage":"151","ipdsId":"IP-124454","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":450610,"rank":3,"type":{"id":40,"text":"Open Access Publisher Index 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,{"id":70230278,"text":"70230278 - 2021 - Louisiana Trustee Implementation Group monitoring and adaptive management strategy (LA TIG MAM Strategy)","interactions":[],"lastModifiedDate":"2022-04-08T13:46:19.790011","indexId":"70230278","displayToPublicDate":"2021-09-30T08:43:10","publicationYear":"2021","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":9,"text":"Other Report"},"title":"Louisiana Trustee Implementation Group monitoring and adaptive management strategy (LA TIG MAM Strategy)","docAbstract":"The purpose of the Louisiana Trustee Implementation Group (LA TIG) Monitoring and Adaptive Management (MAM) Strategy is to outline an approach for the LA TIG to prioritize MAM activities in Louisiana for effective and efficient evaluation of the restoration of resources injured by the Deepwater Horizon (DWH) oil spill. 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,{"id":70230313,"text":"70230313 - 2021 - Analysis of body condition indices reveals different ecotypes of the Antillean manatee","interactions":[],"lastModifiedDate":"2022-04-07T13:46:53.563227","indexId":"70230313","displayToPublicDate":"2021-09-30T08:32:47","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3358,"text":"Scientific Reports","active":true,"publicationSubtype":{"id":10}},"title":"Analysis of body condition indices reveals different ecotypes of the Antillean manatee","docAbstract":"<p><span>Assessing the body condition of wild animals is necessary to monitor the health of the population and is critical to defining a framework for conservation actions. Body condition indices (BCIs) are a non-invasive and relatively simple means to assess the health of individual animals, useful for addressing a wide variety of ecological, behavioral, and management questions. The Antillean manatee (</span><i>Trichechus manatus manatus</i><span>) is an endangered subspecies of the West Indian manatee, facing a wide variety of threats from mostly human-related origins. Our objective was to define specific BCIs for the subspecies that, coupled with additional health, genetic and demographic information, can be valuable to guide management decisions. Biometric measurements of 380 wild Antillean manatees captured in seven different locations within their range of distribution were obtained. From this information, we developed three BCIs (BCI</span><sub>1</sub><span> = UG/SL, BCI</span><sub>2</sub><span> = W/SL</span><sup>3</sup><span>, BCI</span><sub>3</sub><span> = W/(SL*UG</span><sup>2</sup><span>)). Linear models and two-way ANCOVA tests showed significant differences of the BCIs among sexes and locations. Although our three BCIs are suitable for Antillean manatees, BCI</span><sub>1</sub><span>&nbsp;is more practical as it does not require information about weight, which can be a metric logistically difficult to collect under particular circumstances. BCI</span><sub>1</sub><span>&nbsp;was significantly different among environments, revealing that the phenotypic plasticity of the subspecies have originated at least two ecotypes—coastal marine and riverine—of Antillean manatees.</span></p>","language":"English","publisher":"Nature Publications","doi":"10.1038/s41598-021-98890-0","usgsCitation":"Castelblanco-Martinez, D.N., Slone, D., Landeo-Yauri, S.S., Ramos, E.A., Álvarez-Alemán, A., Attademo, F., Beck, C., Bonde, R.K., Butler, S.M., Cabrias-Contreras, L.J., Caicedo-Herrera, D., Galves, J., Gomez-Camelo, I.V., Gonzalez-Socoloske, D., Jiménez-Domínguez, D., Luna, F.O., Mona-Sanabria, Y., Morales-Vela, J.B., Olivera-Gomez, L., Padilla-Saldivar, J.A., Powell, J., Reid, J.P., Rieucau, G., and Mignucci-Gianonni, A.A., 2021, Analysis of body condition indices reveals different ecotypes of the Antillean manatee: Scientific Reports, v. 11, 19451, 14 p., https://doi.org/10.1038/s41598-021-98890-0.","productDescription":"19451, 14 p.","ipdsId":"IP-125905","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":450612,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1038/s41598-021-98890-0","text":"Publisher Index Page"},{"id":398309,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Belize, Brazil, Colombia, Cuba, Mexico, United States","state":"Puerto Rico","otherGeospatial":"Caribbean Sea","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -37.6171875,\n              -13.068776734357694\n            ],\n            [\n              -33.310546875,\n              -9.188870084473393\n            ],\n            [\n              -33.662109375,\n              -3.688855143147035\n            ],\n            [\n              -65.126953125,\n              20.96143961409684\n            ],\n            [\n              -83.408203125,\n              24.607069137709683\n            ],\n            [\n              -88.857421875,\n              19.062117883514652\n            ],\n            [\n              -89.56054687499999,\n              14.00869637063467\n            ],\n            [\n              -84.462890625,\n              10.055402736564236\n            ],\n            [\n              -80.419921875,\n              8.320212289522944\n            ],\n            [\n              -78.046875,\n              9.102096738726456\n            ],\n            [\n              -74.794921875,\n              2.6357885741666065\n            ],\n            [\n              -71.630859375,\n              1.845383988573187\n            ],\n            [\n              -72.7734375,\n              10.14193168613103\n            ],\n            [\n              -66.70898437499999,\n              10.055402736564236\n            ],\n            [\n              -61.17187499999999,\n              7.710991655433217\n            ],\n            [\n              -52.20703125,\n              3.8642546157214084\n            ],\n            [\n              -51.50390625,\n              -2.6357885741666065\n            ],\n            [\n              -39.375,\n              -5.7908968128719565\n            ],\n            [\n              -37.6171875,\n              -13.068776734357694\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"11","noUsgsAuthors":false,"publicationDate":"2021-09-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Castelblanco-Martinez, D. N.","contributorId":289856,"corporation":false,"usgs":false,"family":"Castelblanco-Martinez","given":"D.","email":"","middleInitial":"N.","affiliations":[{"id":62264,"text":"Consejo Nacional de Ciencia y Tecnología, Mexico","active":true,"usgs":false}],"preferred":false,"id":839933,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Slone, Daniel 0000-0002-9903-9727","orcid":"https://orcid.org/0000-0002-9903-9727","contributorId":213750,"corporation":false,"usgs":true,"family":"Slone","given":"Daniel","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":839934,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Landeo-Yauri, S. S.","contributorId":289857,"corporation":false,"usgs":false,"family":"Landeo-Yauri","given":"S.","email":"","middleInitial":"S.","affiliations":[{"id":62267,"text":"Fundación Internacional para la Naturaleza y la Sustentabilidad, Mexico","active":true,"usgs":false}],"preferred":false,"id":839935,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Ramos, E. A.","contributorId":289858,"corporation":false,"usgs":false,"family":"Ramos","given":"E.","email":"","middleInitial":"A.","affiliations":[{"id":62267,"text":"Fundación Internacional para la Naturaleza y la Sustentabilidad, Mexico","active":true,"usgs":false}],"preferred":false,"id":839936,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Álvarez-Alemán, Anmari","contributorId":265539,"corporation":false,"usgs":false,"family":"Álvarez-Alemán","given":"Anmari","affiliations":[{"id":54719,"text":"Clearwater Marine Aquarium Research Institute","active":true,"usgs":false}],"preferred":false,"id":839937,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Attademo, Fernanda L. N.","contributorId":289859,"corporation":false,"usgs":false,"family":"Attademo","given":"Fernanda L. N.","affiliations":[{"id":62268,"text":"Centro Nacional de Pesquisa e Conservação de Mamíferos Aquáticos / Instituto Chico Mendes de Conservação da Biodiversidade, Brazil","active":true,"usgs":false}],"preferred":false,"id":839938,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Beck, Cathy A.","contributorId":289860,"corporation":false,"usgs":false,"family":"Beck","given":"Cathy A.","affiliations":[{"id":54719,"text":"Clearwater Marine Aquarium Research Institute","active":true,"usgs":false}],"preferred":false,"id":839939,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Bonde, Robert K.","contributorId":289663,"corporation":false,"usgs":false,"family":"Bonde","given":"Robert","email":"","middleInitial":"K.","affiliations":[{"id":54719,"text":"Clearwater Marine Aquarium Research Institute","active":true,"usgs":false}],"preferred":false,"id":839940,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Butler, Susan M. 0000-0003-3676-9332 sbutler@usgs.gov","orcid":"https://orcid.org/0000-0003-3676-9332","contributorId":195796,"corporation":false,"usgs":true,"family":"Butler","given":"Susan","email":"sbutler@usgs.gov","middleInitial":"M.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":839941,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Cabrias-Contreras, L. J.","contributorId":289861,"corporation":false,"usgs":false,"family":"Cabrias-Contreras","given":"L.","email":"","middleInitial":"J.","affiliations":[{"id":62269,"text":"Caribbean Manatee Conservation Center, Inter American University of Puerto Rico","active":true,"usgs":false}],"preferred":false,"id":839942,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Caicedo-Herrera, D.","contributorId":289862,"corporation":false,"usgs":false,"family":"Caicedo-Herrera","given":"D.","affiliations":[{"id":62270,"text":"Fundación Omacha, Colombia","active":true,"usgs":false}],"preferred":false,"id":839943,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Galves, Jamal","contributorId":289863,"corporation":false,"usgs":false,"family":"Galves","given":"Jamal","email":"","affiliations":[{"id":54719,"text":"Clearwater Marine Aquarium Research Institute","active":true,"usgs":false}],"preferred":false,"id":839944,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Gomez-Camelo, I. V.","contributorId":289864,"corporation":false,"usgs":false,"family":"Gomez-Camelo","given":"I.","email":"","middleInitial":"V.","affiliations":[{"id":62270,"text":"Fundación Omacha, Colombia","active":true,"usgs":false}],"preferred":false,"id":839945,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Gonzalez-Socoloske, D.","contributorId":289865,"corporation":false,"usgs":false,"family":"Gonzalez-Socoloske","given":"D.","email":"","affiliations":[{"id":62271,"text":"Andrews University","active":true,"usgs":false}],"preferred":false,"id":839946,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Jiménez-Domínguez, D.","contributorId":289866,"corporation":false,"usgs":false,"family":"Jiménez-Domínguez","given":"D.","affiliations":[{"id":62272,"text":"Universidad Juarez Autónoma de Tabasco, Mexico","active":true,"usgs":false}],"preferred":false,"id":839947,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Luna, Fabia O.","contributorId":256966,"corporation":false,"usgs":false,"family":"Luna","given":"Fabia","email":"","middleInitial":"O.","affiliations":[{"id":51921,"text":"Instituto Chico Mendes de Conservação da Biodiversidade/Centro Nacional de Pesquisa e Conservação de Mamíferos Aquáticos (ICMBio/CMA), Santos, São Paulo, Brazil","active":true,"usgs":false}],"preferred":false,"id":839948,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Mona-Sanabria, Y.","contributorId":289867,"corporation":false,"usgs":false,"family":"Mona-Sanabria","given":"Y.","email":"","affiliations":[{"id":62270,"text":"Fundación Omacha, Colombia","active":true,"usgs":false}],"preferred":false,"id":839949,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Morales-Vela, J. B.","contributorId":289868,"corporation":false,"usgs":false,"family":"Morales-Vela","given":"J.","email":"","middleInitial":"B.","affiliations":[{"id":62273,"text":"El Colegio de la Frontera Sur, Mexico","active":true,"usgs":false}],"preferred":false,"id":839950,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Olivera-Gomez, L. D.","contributorId":289869,"corporation":false,"usgs":false,"family":"Olivera-Gomez","given":"L. D.","affiliations":[{"id":62272,"text":"Universidad Juarez Autónoma de Tabasco, Mexico","active":true,"usgs":false}],"preferred":false,"id":839951,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Padilla-Saldivar, Janneth Adriana","contributorId":140524,"corporation":false,"usgs":false,"family":"Padilla-Saldivar","given":"Janneth","email":"","middleInitial":"Adriana","affiliations":[{"id":13524,"text":"El Colegio de la Frontera Sur, Quintana Roo, Mexico","active":true,"usgs":false}],"preferred":false,"id":839952,"contributorType":{"id":1,"text":"Authors"},"rank":20},{"text":"Powell, James A.","contributorId":288150,"corporation":false,"usgs":false,"family":"Powell","given":"James A.","affiliations":[{"id":28050,"text":"USU","active":true,"usgs":false}],"preferred":false,"id":839953,"contributorType":{"id":1,"text":"Authors"},"rank":21},{"text":"Reid, James P. 0000-0002-8497-1132","orcid":"https://orcid.org/0000-0002-8497-1132","contributorId":206849,"corporation":false,"usgs":true,"family":"Reid","given":"James","email":"","middleInitial":"P.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":839954,"contributorType":{"id":1,"text":"Authors"},"rank":22},{"text":"Rieucau, G.","contributorId":289870,"corporation":false,"usgs":false,"family":"Rieucau","given":"G.","email":"","affiliations":[{"id":62267,"text":"Fundación Internacional para la Naturaleza y la Sustentabilidad, Mexico","active":true,"usgs":false}],"preferred":false,"id":839955,"contributorType":{"id":1,"text":"Authors"},"rank":23},{"text":"Mignucci-Gianonni, Antonio A.","contributorId":289871,"corporation":false,"usgs":false,"family":"Mignucci-Gianonni","given":"Antonio","email":"","middleInitial":"A.","affiliations":[{"id":62269,"text":"Caribbean Manatee Conservation Center, Inter American University of Puerto Rico","active":true,"usgs":false}],"preferred":false,"id":839956,"contributorType":{"id":1,"text":"Authors"},"rank":24}]}}
,{"id":70224634,"text":"70224634 - 2021 - Machine learning can assign geologic basin to produced water samples using major ion geochemistry","interactions":[],"lastModifiedDate":"2021-11-16T15:48:00.581979","indexId":"70224634","displayToPublicDate":"2021-09-30T08:16:43","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2832,"text":"Natural Resources Research","onlineIssn":"1573-8981","printIssn":"1520-7439","active":true,"publicationSubtype":{"id":10}},"title":"Machine learning can assign geologic basin to produced water samples using major ion geochemistry","docAbstract":"<p><span>Understanding the geochemistry of waters produced during petroleum extraction is essential to informing the best treatment and reuse options, which can potentially be optimized for a given geologic basin. Here, we used the US Geological Survey’s National Produced Waters Geochemical Database (PWGD) to determine if major ion chemistry could be used to classify accurately a produced water sample to a given geologic basin based on similarities to a given training dataset. Two datasets were derived from the PWGD: one with seven features but more samples (PWGD7), and another with nine features but fewer samples (PWGD9). The seven-feature dataset, prior to randomly generating a training and testing (i.e., validation) dataset, had 58,541 samples, 20 basins, and was classified based on total dissolved solids (TDS), bicarbonate (HCO</span><sub>3</sub><span>), Ca, Na, Cl, Mg, and sulfate (SO</span><sub>4</sub><span>). The nine-feature dataset, prior to randomly splitting into a training and testing (i.e., validation) dataset, contained 33,271 samples, 19 basins, and was classified based on TDS, HCO</span><sub>3</sub><span>, Ca, Na, Cl, Mg, SO</span><sub>4</sub><span>, pH, and specific gravity. Three supervised machine learning algorithms—Random Forest, k-Nearest Neighbors, and Naïve Bayes—were used to develop multi-class classification models to predict a basin of origin for produced waters using major ion chemistry. After training, the models were tested on three different datasets: Validation7, Validation9, and one based on data absent from the PWGD. Prediction accuracies across the models ranged from 23.5 to 73.5% when tested on the two PWGD-based datasets. A model using the Random Forest algorithm predicted most accurately compared to all other models tested. The models generally predicted basin of origin more accurately on the PWGD7-based dataset than on the PWGD9-based dataset. An additional dataset, which contained data not in the PWGD, was used to test the most accurate model; results suggest that some basins may lack geochemical diversity or may not be well described, while others may be geochemically diverse or are well described. A compelling result of this work is that a produced water basin of origin can be determined using major ions alone and, therefore, deep basinal fluid compositions may not be as variable within a given basin as previously thought. Applications include predicting the geochemistry of produced fluid prior to drilling at different intervals and assigning historical produced water data to a producing basin.</span></p>","language":"English","publisher":"Springer Link","doi":"10.1007/s11053-021-09949-8","usgsCitation":"Shelton, J., Jubb, A., Saxe, S., Attanasi, E., Milkov, A., Engle, M.A., Freeman, P., Shaffer, C., and Blondes, M., 2021, Machine learning can assign geologic basin to produced water samples using major ion geochemistry: Natural Resources Research, v. 30, p. 4147-4163, https://doi.org/10.1007/s11053-021-09949-8.","productDescription":"17 p.","startPage":"4147","endPage":"4163","ipdsId":"IP-126045","costCenters":[{"id":49175,"text":"Geology, Energy & Minerals Science Center","active":true,"usgs":true}],"links":[{"id":450614,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s11053-021-09949-8","text":"Publisher Index Page"},{"id":390110,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"30","noUsgsAuthors":false,"publicationDate":"2021-09-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Shelton, Jenna L. 0000-0002-1377-0675 jlshelton@usgs.gov","orcid":"https://orcid.org/0000-0002-1377-0675","contributorId":5025,"corporation":false,"usgs":true,"family":"Shelton","given":"Jenna L.","email":"jlshelton@usgs.gov","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824454,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jubb, Aaron M. 0000-0001-6875-1079","orcid":"https://orcid.org/0000-0001-6875-1079","contributorId":201978,"corporation":false,"usgs":true,"family":"Jubb","given":"Aaron M.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824455,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Saxe, Samuel 0000-0003-1151-8908","orcid":"https://orcid.org/0000-0003-1151-8908","contributorId":215753,"corporation":false,"usgs":true,"family":"Saxe","given":"Samuel","email":"","affiliations":[{"id":37778,"text":"WMA - Integrated Modeling and Prediction Division","active":true,"usgs":true}],"preferred":true,"id":824456,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Attanasi, Emil D. 0000-0001-6845-7160 attanasi@usgs.gov","orcid":"https://orcid.org/0000-0001-6845-7160","contributorId":198728,"corporation":false,"usgs":true,"family":"Attanasi","given":"Emil D.","email":"attanasi@usgs.gov","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824457,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Milkov, Alexei","contributorId":266160,"corporation":false,"usgs":false,"family":"Milkov","given":"Alexei","email":"","affiliations":[{"id":6606,"text":"Colorado School of Mines","active":true,"usgs":false}],"preferred":false,"id":824458,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Engle, Mark A 0000-0001-5258-7374","orcid":"https://orcid.org/0000-0001-5258-7374","contributorId":228981,"corporation":false,"usgs":false,"family":"Engle","given":"Mark","email":"","middleInitial":"A","affiliations":[{"id":41535,"text":"The University of Texas at El Paso, Department of Geological Sciences, El Paso, TX 79968","active":true,"usgs":false}],"preferred":false,"id":824459,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Freeman, Philip A. 0000-0002-0863-7431","orcid":"https://orcid.org/0000-0002-0863-7431","contributorId":206294,"corporation":false,"usgs":true,"family":"Freeman","given":"Philip A.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824460,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Shaffer, Christopher","contributorId":266161,"corporation":false,"usgs":false,"family":"Shaffer","given":"Christopher","email":"","affiliations":[{"id":6654,"text":"USFWS","active":true,"usgs":false}],"preferred":false,"id":824461,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Blondes, Madalyn S. 0000-0003-0320-0107 mblondes@usgs.gov","orcid":"https://orcid.org/0000-0003-0320-0107","contributorId":3598,"corporation":false,"usgs":true,"family":"Blondes","given":"Madalyn S.","email":"mblondes@usgs.gov","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824462,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70225551,"text":"70225551 - 2021 - Clays are not created equal: How clay mineral type affects soil parameterization","interactions":[],"lastModifiedDate":"2021-10-22T12:42:02.867477","indexId":"70225551","displayToPublicDate":"2021-09-30T07:38:20","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1807,"text":"Geophysical Research Letters","active":true,"publicationSubtype":{"id":10}},"title":"Clays are not created equal: How clay mineral type affects soil parameterization","docAbstract":"<div class=\"article-section__content en main\"><p>Clay minerals dominate the soil colloidal fraction and its specific surface area. Differences among clay mineral types significantly influence their effects on soil hydrological and mechanical behavior. Presently, the soil clay content is used to parameterize soil hydraulic and mechanical properties (SHMP) for land surface models while disregarding the type of clay mineral. This undifferentiated use of clay leads to inconsistent parameterization, particularly between tropical and temperate soils, as shown herein. We capitalize on recent global maps of clay minerals that exhibit strong climatic and spatial segregation of active and inactive clays to consider spatially resolved clay mineral types in SHMP estimation. Clay mineral-informed pedotransfer functions and machine learning algorithms trained with datasets including different clay types and soil structure formation processes improve SHMP representation regionally with broad implications for hydrological and geomechanical Earth surface processes.</p></div>","language":"English","publisher":"American Geophysical Union","doi":"10.1029/2021GL095311","usgsCitation":"Lehmann, P., Leshchinsky, B., Gupta, S., Mirus, B.B., Bickel, S., Lu, N., and Or, D., 2021, Clays are not created equal: How clay mineral type affects soil parameterization: Geophysical Research Letters, v. 48, no. 20, e2021GL095311, 10 p., https://doi.org/10.1029/2021GL095311.","productDescription":"e2021GL095311, 10 p.","ipdsId":"IP-133012","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":450616,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2021gl095311","text":"Publisher Index Page"},{"id":390814,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"48","issue":"20","noUsgsAuthors":false,"publicationDate":"2021-10-20","publicationStatus":"PW","contributors":{"authors":[{"text":"Lehmann, Peter","contributorId":267909,"corporation":false,"usgs":false,"family":"Lehmann","given":"Peter","email":"","affiliations":[{"id":12483,"text":"ETH Zurich","active":true,"usgs":false}],"preferred":false,"id":825554,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Leshchinsky, Ben","contributorId":267910,"corporation":false,"usgs":false,"family":"Leshchinsky","given":"Ben","affiliations":[{"id":6680,"text":"Oregon State University","active":true,"usgs":false}],"preferred":false,"id":825555,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Gupta, Surya","contributorId":267911,"corporation":false,"usgs":false,"family":"Gupta","given":"Surya","email":"","affiliations":[{"id":12483,"text":"ETH Zurich","active":true,"usgs":false}],"preferred":false,"id":825556,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mirus, Benjamin B. 0000-0001-5550-014X bbmirus@usgs.gov","orcid":"https://orcid.org/0000-0001-5550-014X","contributorId":4064,"corporation":false,"usgs":true,"family":"Mirus","given":"Benjamin","email":"bbmirus@usgs.gov","middleInitial":"B.","affiliations":[{"id":5077,"text":"Northwest Regional Director's Office","active":true,"usgs":true},{"id":5061,"text":"National Cooperative Geologic Mapping and Landslide Hazards","active":true,"usgs":true},{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":true,"id":825557,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Bickel, Samuel","contributorId":267913,"corporation":false,"usgs":false,"family":"Bickel","given":"Samuel","email":"","affiliations":[{"id":12483,"text":"ETH Zurich","active":true,"usgs":false}],"preferred":false,"id":825558,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Lu, Ning","contributorId":267914,"corporation":false,"usgs":false,"family":"Lu","given":"Ning","affiliations":[{"id":6606,"text":"Colorado School of Mines","active":true,"usgs":false}],"preferred":false,"id":825559,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Or, Dani","contributorId":267915,"corporation":false,"usgs":false,"family":"Or","given":"Dani","affiliations":[{"id":55530,"text":"ETH / DRI","active":true,"usgs":false}],"preferred":false,"id":825560,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70230321,"text":"70230321 - 2021 - The Louisiana Amphibian Monitoring Program from 1997 to 2017: Results, analyses, and lessons learned","interactions":[],"lastModifiedDate":"2023-06-09T13:59:27.597559","indexId":"70230321","displayToPublicDate":"2021-09-30T07:24:12","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2980,"text":"PLoS ONE","active":true,"publicationSubtype":{"id":10}},"title":"The Louisiana Amphibian Monitoring Program from 1997 to 2017: Results, analyses, and lessons learned","docAbstract":"<div class=\"abstract toc-section abstract-type-\"><div class=\"abstract-content\"><p>To determine trends in either frog distribution or abundance in the State of Louisiana, we reviewed and analyzed frog call data from the Louisiana Amphibian Monitoring Program (LAMP). The data were collected between 1997 and 2017 using North American Amphibian Monitoring Program protocols. Louisiana was divided into three survey regions for administration and analysis: the Florida Parishes, and 2 areas west of the Florida parishes called North and South. Fifty-four routes were surveyed with over 12,792 stops and 1,066 hours of observation. Observers heard 26 species of the 31 species reported to be in Louisiana. Three of the species not heard were natives with ranges that did not overlap with survey routes. The other two species were introduced species, the Rio Grande Chirping Frog (<i>Eleutherodactylus cystignathoides)</i><span>&nbsp;</span>and the Cuban Treefrog (<i>Osteopilus septentrionalis)</i>. Both seem to be limited to urban areas with little to no route coverage. The 15 most commonly occurring species were examined in detail using the percentage of stops at which they observed along a given survey and their call indices. Most species exhibited a multimodal, concave, or convex pattern of abundance over a 15-year period. Among LAMP survey regions, none of the species had synchronous population trends. Only one group of species, winter callers, regularly co-occur. Based on the species lists, the North region could be seen as a subset of the South. However, based on relative abundance, the North was more similar to Florida parishes for both the winter and summer survey runs. Our analyses demonstrate that long-term monitoring (10 years or more) may be necessary to determine population and occupancy trends, and that frog species may have different local demographic patterns across large geographic areas.</p></div></div>","language":"English","publisher":"Public Library of Science","doi":"10.1371/journal.pone.0257869","usgsCitation":"Carter, J., Johnson, D., Boundy, J., and Vermillion, W., 2021, The Louisiana Amphibian Monitoring Program from 1997 to 2017: Results, analyses, and lessons learned: PLoS ONE, v. 16, no. 9, e0257869, 22 p.; Data Release, https://doi.org/10.1371/journal.pone.0257869.","productDescription":"e0257869, 22 p.; Data Release","ipdsId":"IP-119502","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":450618,"rank":3,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1371/journal.pone.0257869","text":"Publisher Index Page"},{"id":398305,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":417868,"rank":2,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9VNBWM2"}],"country":"United 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 \"}}]}","volume":"16","issue":"9","noUsgsAuthors":false,"publicationDate":"2021-09-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Carter, Jacoby 0000-0003-0110-0284","orcid":"https://orcid.org/0000-0003-0110-0284","contributorId":218419,"corporation":false,"usgs":true,"family":"Carter","given":"Jacoby","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":839979,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Johnson, Darren 0000-0002-0502-6045","orcid":"https://orcid.org/0000-0002-0502-6045","contributorId":203921,"corporation":false,"usgs":true,"family":"Johnson","given":"Darren","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":839980,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Boundy, Jeff","contributorId":289888,"corporation":false,"usgs":false,"family":"Boundy","given":"Jeff","email":"","affiliations":[{"id":12717,"text":"Louisiana Department of Wildlife and Fisheries","active":true,"usgs":false}],"preferred":false,"id":839981,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Vermillion, William","contributorId":245515,"corporation":false,"usgs":false,"family":"Vermillion","given":"William","affiliations":[{"id":49214,"text":"USFWS, Gulf Coast Joint Venture","active":true,"usgs":false}],"preferred":false,"id":840014,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70237248,"text":"70237248 - 2021 - Loss of ice cover, shifting phenology, and more extreme events in Northern Hemisphere lakes","interactions":[],"lastModifiedDate":"2022-10-05T11:57:36.953598","indexId":"70237248","displayToPublicDate":"2021-09-30T06:54:06","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2320,"text":"Journal of Geophysical Research: Biogeosciences","active":true,"publicationSubtype":{"id":10}},"title":"Loss of ice cover, shifting phenology, and more extreme events in Northern Hemisphere lakes","docAbstract":"<div class=\"article-section__content en main\"><p>Long-term lake ice phenological records from around the Northern Hemisphere provide unique sensitive indicators of climatic variations, even prior to the existence of physical meteorological measurement stations. Here, we updated ice phenology records for 60 lakes with time-series ranging from 107–204&nbsp;years to provide the first re-assessment of Northern Hemispheric ice trends since 2004 by adding 15 additional years of ice phenology records and 40 lakes to our study. We found that, on average, ice-on was 11.0&nbsp;days later, ice-off was 6.8&nbsp;days earlier, and ice duration was 17.0&nbsp;days shorter per century over the entire record for each lake. Trends in ice-on and ice duration were six times faster in the last 25-year period (1992–2016) than previous quarter centuries. More extreme events in recent decades, including late ice-on, early ice-off, shorter periods of ice cover, or no ice cover at all, contribute to the increasing rate of lake ice loss. Reductions in greenhouse gas emissions could limit increases in air temperature and abate losses in lake ice cover that would subsequently limit ecological, cultural, and socioeconomic consequences, such as increased evaporation rates, warmer water temperatures, degraded water quality, and the formation of toxic algal blooms.</p></div>","language":"English","publisher":"American Geophysical Union","doi":"10.1029/2021JG006348","usgsCitation":"Sharma, S., Richardson, D., Woolway, R.I., Imrit, M., Bouffard, D., Blagrave, K., Daly, J., Filazzola, A., Granin, N., Korhonen, J., Magnuson, J.J., Marszelewski, W., Matsuzaki, S.I., Perry, W.J., Robertson, D., Rudstam, L., Weyhenmeyer, G.A., and Yao, H., 2021, Loss of ice cover, shifting phenology, and more extreme events in Northern Hemisphere lakes: Journal of Geophysical Research: Biogeosciences, v. 126, no. 10, e2021JG006348, 12 p., https://doi.org/10.1029/2021JG006348.","productDescription":"e2021JG006348, 12 p.","ipdsId":"IP-127548","costCenters":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"links":[{"id":450621,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2021jg006348","text":"Publisher Index Page"},{"id":407952,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"126","issue":"10","noUsgsAuthors":false,"publicationDate":"2021-10-11","publicationStatus":"PW","contributors":{"authors":[{"text":"Sharma, Sapna","contributorId":150332,"corporation":false,"usgs":false,"family":"Sharma","given":"Sapna","email":"","affiliations":[{"id":16184,"text":"York University","active":true,"usgs":false}],"preferred":false,"id":853825,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Richardson, David ","contributorId":223903,"corporation":false,"usgs":false,"family":"Richardson","given":"David ","affiliations":[{"id":36803,"text":"NOAA","active":true,"usgs":false}],"preferred":false,"id":853826,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Woolway, R. Iestyn 0000-0003-0498-7968","orcid":"https://orcid.org/0000-0003-0498-7968","contributorId":297333,"corporation":false,"usgs":false,"family":"Woolway","given":"R.","email":"","middleInitial":"Iestyn","affiliations":[{"id":64373,"text":"European Space Agency Climate Office","active":true,"usgs":false}],"preferred":false,"id":853827,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Imrit, M.A.","contributorId":297334,"corporation":false,"usgs":false,"family":"Imrit","given":"M.A.","affiliations":[{"id":16184,"text":"York University","active":true,"usgs":false}],"preferred":false,"id":853828,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Bouffard, Damien","contributorId":297301,"corporation":false,"usgs":false,"family":"Bouffard","given":"Damien","affiliations":[{"id":64357,"text":"EAWAG, Swiss Federal Institute","active":true,"usgs":false}],"preferred":false,"id":853829,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Blagrave, Kevin","contributorId":211887,"corporation":false,"usgs":false,"family":"Blagrave","given":"Kevin","email":"","affiliations":[{"id":38342,"text":"Department of Biology, York University, Toronto, Ontario, Canada","active":true,"usgs":false}],"preferred":false,"id":853830,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Daly, Julia","contributorId":297305,"corporation":false,"usgs":false,"family":"Daly","given":"Julia","email":"","affiliations":[{"id":7063,"text":"University of Maine","active":true,"usgs":false}],"preferred":false,"id":853831,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Filazzola, Alessandro","contributorId":297335,"corporation":false,"usgs":false,"family":"Filazzola","given":"Alessandro","email":"","affiliations":[{"id":16184,"text":"York University","active":true,"usgs":false}],"preferred":false,"id":853832,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Granin, Nikolay","contributorId":297311,"corporation":false,"usgs":false,"family":"Granin","given":"Nikolay","email":"","affiliations":[{"id":64363,"text":"Siberian Branch of Russian Academy of Sciences","active":true,"usgs":false}],"preferred":false,"id":853833,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Korhonen, Johanna","contributorId":198048,"corporation":false,"usgs":false,"family":"Korhonen","given":"Johanna","email":"","affiliations":[],"preferred":false,"id":853834,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Magnuson, John J.","contributorId":211889,"corporation":false,"usgs":false,"family":"Magnuson","given":"John","email":"","middleInitial":"J.","affiliations":[{"id":38344,"text":"Center for Limnology, University of Wisconsin-Madison, Madison, Wisconsin, USA","active":true,"usgs":false}],"preferred":false,"id":853835,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Marszelewski, Wlodzimierz","contributorId":297336,"corporation":false,"usgs":false,"family":"Marszelewski","given":"Wlodzimierz","email":"","affiliations":[{"id":64376,"text":"Faculty of Earth Sciences and Spatial Management, ul. Gagarina","active":true,"usgs":false}],"preferred":false,"id":853836,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Matsuzaki, Shin I","contributorId":297337,"corporation":false,"usgs":false,"family":"Matsuzaki","given":"Shin","email":"","middleInitial":"I","affiliations":[{"id":64377,"text":"National Institute for Environmental Studies, Onogawa","active":true,"usgs":false}],"preferred":false,"id":853837,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Perry, William J. Jr.","contributorId":220116,"corporation":false,"usgs":false,"family":"Perry","given":"William","suffix":"Jr.","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":853838,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Robertson, Dale M. 0000-0001-6799-0596","orcid":"https://orcid.org/0000-0001-6799-0596","contributorId":217258,"corporation":false,"usgs":true,"family":"Robertson","given":"Dale M.","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":853839,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Rudstam, Lars G.","contributorId":275304,"corporation":false,"usgs":false,"family":"Rudstam","given":"Lars G.","affiliations":[{"id":12722,"text":"Cornell University","active":true,"usgs":false}],"preferred":false,"id":853840,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Weyhenmeyer, Gesa A.","contributorId":150314,"corporation":false,"usgs":false,"family":"Weyhenmeyer","given":"Gesa","email":"","middleInitial":"A.","affiliations":[{"id":17988,"text":"Department of Ecology and Genetics/Limnology, Uppsala University, Uppsala, Sweden","active":true,"usgs":false}],"preferred":false,"id":853841,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Yao, Huaxia 0000-0001-5875-7215","orcid":"https://orcid.org/0000-0001-5875-7215","contributorId":261759,"corporation":false,"usgs":false,"family":"Yao","given":"Huaxia","email":"","affiliations":[{"id":52996,"text":"Dorset Environmental Science Centre","active":true,"usgs":false}],"preferred":false,"id":853842,"contributorType":{"id":1,"text":"Authors"},"rank":18}]}}
,{"id":70225493,"text":"70225493 - 2021 - Avian predation of juvenile Lost River and Shortnose Suckers in Upper Klamath Lake: An assessment of Sucker assisted rearing program releases during 2018–2020","interactions":[],"lastModifiedDate":"2021-10-18T11:52:19.355981","indexId":"70225493","displayToPublicDate":"2021-09-30T06:50:08","publicationYear":"2021","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":4,"text":"Other Government Series"},"title":"Avian predation of juvenile Lost River and Shortnose Suckers in Upper Klamath Lake: An assessment of Sucker assisted rearing program releases during 2018–2020","docAbstract":"To bolster recruitment in Endangered Species Act (ESA) listed Lost River Suckers (Deltistes luxatus) and Shortnose Suckers (Chasmistes brevirostris) in the Upper Klamath Basin (UKB), the U.S. Fish and Wildlife Service (USFWS) and its partners have implemented the Sucker Assisted Rearing Program (SARP). As part of this program, juvenile suckers were reared in captivity, implanted with passive integrated transponder (PIT) tags (n= 8,857), and released into the Upper Klamath Lake or its tributaries during 2018–2020. Previous research suggests that predation by American White Pelicans (Pelecanus erythrorhynchos), Double-crested Cormorants (Nannopterum auritum), and Caspian Terns (Hydroprogne caspia) may negatively influence sucker survival, particularly predation on juvenile suckers. Estimates of predation impacts from past studies, however, represented minimum estimates of sucker mortality because analyses did not account for the proportion of consumed tags that were deposited by birds on their breeding colony where PIT tag recovery efforts took place. To estimate and account for deposition probabilities, we conducted a field study in which we fed pelicans PIT-tagged juvenile suckers (n = 401). We accounted for deposition probabilities of cormorants and terns by using previously published estimates. Sucker PIT tags were recovered from pelican, cormorant, and tern nesting sites in the UKB following each breeding season and a hierarchical Bayesian model was used to estimate predation rates (percentage of available tagged fish consumed) on SARP releases as well as naturally-reared or wild juvenile suckers and adult suckers that were PIT-tagged in Upper Klamath Lake and Clear Lake Reservoir. Pelican deposition probabilities were estimated at 0.47 (95% credible interval = 0.36–0.60), indicating that for every 100 PIT tags consumed, on average, 47 were deposited by pelicans on breeding colonies. Estimates of predation rates that incorporate corrections for deposition on SARP releases ranged annually from 4.4% (95% credible interval = 2.9–6.8%) to 8.8% (6.2–13.3%) during 2018–2020. Results suggest that colonial waterbird predation impacts on SARP releases likely constituted a small, but unknown, component of total mortality for suckers released into the Upper Klamath Lake system. Predation impacts on SARP juvenile suckers and wild juvenile suckers, which were estimated annually at 4.7% (1.0–13.9%) to 14.9% (7.6–29.3%), were consistently higher than those observed on adult suckers, with predation on adult suckers typically less than 4.0% of available fish annually. Future predation studies may consider models that integrate both live and dead detections of PIT-tagged suckers to generate more accurate and precise estimates of survival following release, as well as models that consider environmental factors that influence sucker susceptibility to colonial waterbird predation. Such models would provide a more holistic understanding of the degree to which avian predation limits the survival of ESA-listed suckers in the UKB.","language":"English","publisher":"Bird Research Northwest","usgsCitation":"Evans, A., Payton, Q., Banet, N.V., Cramer, B.M., Kelsey, C., and Hewitt, D.A., 2021, Avian predation of juvenile Lost River and Shortnose Suckers in Upper Klamath Lake: An assessment of Sucker assisted rearing program releases during 2018–2020, 30 p.","productDescription":"30 p.","ipdsId":"IP-131607","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":390601,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":390581,"type":{"id":15,"text":"Index Page"},"url":"https://www.birdresearchnw.org/2021%20Final%20SARP%20Avian%20Predation%20Technical%20Report.pdf"}],"country":"United States","state":"Oregon","otherGeospatial":"Upper Klamath Lake","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.2174072265625,\n              42.10229818948117\n            ],\n            [\n              -121.6021728515625,\n              42.10229818948117\n            ],\n            [\n              -121.6021728515625,\n              42.71069600569497\n            ],\n            [\n              -122.2174072265625,\n              42.71069600569497\n            ],\n            [\n              -122.2174072265625,\n              42.10229818948117\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Evans, Allen","contributorId":149989,"corporation":false,"usgs":false,"family":"Evans","given":"Allen","affiliations":[{"id":17879,"text":"Real Time Research, Inc., 231 SW Scalehouse Loop, Suite 101, Bend, OR 97702","active":true,"usgs":false}],"preferred":false,"id":825266,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Payton, Quinn","contributorId":149990,"corporation":false,"usgs":false,"family":"Payton","given":"Quinn","email":"","affiliations":[{"id":17879,"text":"Real Time Research, Inc., 231 SW Scalehouse Loop, Suite 101, Bend, OR 97702","active":true,"usgs":false}],"preferred":false,"id":825267,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Banet, Nathan V 0000-0002-8537-1702","orcid":"https://orcid.org/0000-0002-8537-1702","contributorId":238015,"corporation":false,"usgs":false,"family":"Banet","given":"Nathan","email":"","middleInitial":"V","affiliations":[{"id":24583,"text":"former USGS employee","active":true,"usgs":false}],"preferred":false,"id":825268,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Cramer, Bradley M.","contributorId":171692,"corporation":false,"usgs":false,"family":"Cramer","given":"Bradley","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":825269,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kelsey, Caylen 0000-0003-0470-0963","orcid":"https://orcid.org/0000-0003-0470-0963","contributorId":267787,"corporation":false,"usgs":false,"family":"Kelsey","given":"Caylen","affiliations":[{"id":55504,"text":"Previously - U.S. Geological Survey, Western Fisheries Research Center, Klamath Falls Field Station (Currently at: U.S. Fish and Wildlife Service, Alaska Regional Office, 1011 E Tudor Road, Anchorage, AK 99503)","active":true,"usgs":false}],"preferred":false,"id":825270,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hewitt, David A. 0000-0002-5387-0275 dhewitt@usgs.gov","orcid":"https://orcid.org/0000-0002-5387-0275","contributorId":3767,"corporation":false,"usgs":false,"family":"Hewitt","given":"David","email":"dhewitt@usgs.gov","middleInitial":"A.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":825271,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70248114,"text":"70248114 - 2021 - Emergent biogeochemical risks from Arctic permafrost degradation","interactions":[],"lastModifiedDate":"2023-09-05T11:50:47.560897","indexId":"70248114","displayToPublicDate":"2021-09-30T06:48:51","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2841,"text":"Nature Climate Change","onlineIssn":"1758-6798","printIssn":"1758-678X","active":true,"publicationSubtype":{"id":10}},"title":"Emergent biogeochemical risks from Arctic permafrost degradation","docAbstract":"<div id=\"Abs1-section\" class=\"c-article-section\"><div id=\"Abs1-content\" class=\"c-article-section__content\"><p>The Arctic cryosphere is collapsing, posing overlapping environmental risks. In particular, thawing permafrost threatens to release biological, chemical and radioactive materials that have been sequestered for tens to hundreds of thousands of years. As these constituents re-enter the environment, they have the potential to disrupt ecosystem function, reduce the populations of unique Arctic wildlife and endanger human health. Here, we review the current state of the science to identify potential hazards currently frozen in Arctic permafrost. We also consider the cascading natural and anthropogenic processes that may compound the impacts of these risks, as it is unclear whether the highly adapted Arctic ecosystems have the resilience to withstand new stresses. We conclude by recommending research priorities to address these underappreciated risks.</p></div></div>","language":"English","publisher":"Nature","doi":"10.1038/s41558-021-01162-y","usgsCitation":"Miner, K., Mackelprang, R., D’Andrilli, J., Edwards, A., Malaska, M.J., Waldrop, M.P., and Miller, C.E., 2021, Emergent biogeochemical risks from Arctic permafrost degradation: Nature Climate Change, v. 11, p. 809-819, https://doi.org/10.1038/s41558-021-01162-y.","productDescription":"11 p.","startPage":"809","endPage":"819","ipdsId":"IP-128841","costCenters":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"links":[{"id":420462,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"11","noUsgsAuthors":false,"publicationDate":"2021-09-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Miner, Kimberly 0000-0002-1006-1283","orcid":"https://orcid.org/0000-0002-1006-1283","contributorId":329027,"corporation":false,"usgs":false,"family":"Miner","given":"Kimberly","email":"","affiliations":[{"id":7023,"text":"Jet Propulsion Laboratory, California Institute of Technology","active":true,"usgs":false}],"preferred":false,"id":881941,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mackelprang, Rachel","contributorId":200882,"corporation":false,"usgs":false,"family":"Mackelprang","given":"Rachel","email":"","affiliations":[{"id":7080,"text":"California State University, Northridge","active":true,"usgs":false}],"preferred":false,"id":881942,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"D’Andrilli, Juliana 0000-0002-3352-2564","orcid":"https://orcid.org/0000-0002-3352-2564","contributorId":329028,"corporation":false,"usgs":false,"family":"D’Andrilli","given":"Juliana","email":"","affiliations":[{"id":12699,"text":"Louisiana Universities Marine Consortium","active":true,"usgs":false}],"preferred":false,"id":881943,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Edwards, Arwyn 0000-0003-1762-8593","orcid":"https://orcid.org/0000-0003-1762-8593","contributorId":329029,"corporation":false,"usgs":false,"family":"Edwards","given":"Arwyn","email":"","affiliations":[{"id":16758,"text":"Aberystwyth University","active":true,"usgs":false}],"preferred":false,"id":881944,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Malaska, Michael J.","contributorId":241689,"corporation":false,"usgs":false,"family":"Malaska","given":"Michael","email":"","middleInitial":"J.","affiliations":[{"id":36276,"text":"JPL","active":true,"usgs":false}],"preferred":false,"id":881945,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Waldrop, Mark P. 0000-0003-1829-7140 mwaldrop@usgs.gov","orcid":"https://orcid.org/0000-0003-1829-7140","contributorId":1599,"corporation":false,"usgs":true,"family":"Waldrop","given":"Mark","email":"mwaldrop@usgs.gov","middleInitial":"P.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true},{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true},{"id":615,"text":"Volcano Hazards Program","active":true,"usgs":true}],"preferred":true,"id":881946,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Miller, Charles E.","contributorId":270237,"corporation":false,"usgs":false,"family":"Miller","given":"Charles","email":"","middleInitial":"E.","affiliations":[{"id":36392,"text":"Jet Propulsion Laboratory","active":true,"usgs":false}],"preferred":false,"id":881947,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70230391,"text":"70230391 - 2021 - Invasion frustration: Can biotic resistance explain the small geographic range of non-native croaking gourami Trichopsis vittata (Cuvier, 1831) in Florida, USA?","interactions":[],"lastModifiedDate":"2023-06-09T13:59:56.966874","indexId":"70230391","displayToPublicDate":"2021-09-30T06:40:51","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":868,"text":"Aquatic Invasions","active":true,"publicationSubtype":{"id":10}},"title":"Invasion frustration: Can biotic resistance explain the small geographic range of non-native croaking gourami Trichopsis vittata (Cuvier, 1831) in Florida, USA?","docAbstract":"<p>Croaking gourami Trichopsis vittata is a non-native fish species that has maintained a reproducing population in Florida, USA, since at least the 1970s. However, unlike most other non-native fishes in Florida, T. vittata has not spread beyond its very small (ca. 5 km²) range. We suspected the inability of T. vittata to colonize new habitats may be due to biotic resistance by the native eastern mosquitofish Gambusia holbrooki. In laboratory experiments, we show that G. holbrooki causes physical damage to T. vittata and that T. vittata’s growth is reduced in the presence of G. holbrooki. While the effects of G. holbrooki on T. vittata were sub-lethal, they were severe enough to hamper its growth and could affect recruitment in the wild. These results support the hypothesis that small non-native fishes may be excluded from establishment or may only establish small ranges due to pressure from G. holbrooki. Biotic resistance may reduce invasion success and thus consideration of species interactions is useful for natural resource managers trying to evaluate the potential risk of new invaders.</p>","language":"English","publisher":"Regional Euro-Asian Biological Invasions Centre (REABIC)","doi":"10.3391/ai.2021.16.3.08","usgsCitation":"Schofield, P., Tuckett, Q.M., Slone, D., Reaver, K., and Hill, J.H., 2021, Invasion frustration: Can biotic resistance explain the small geographic range of non-native croaking gourami Trichopsis vittata (Cuvier, 1831) in Florida, USA?: Aquatic Invasions, v. 16, no. 3, p. 512-526, https://doi.org/10.3391/ai.2021.16.3.08.","productDescription":"15 p.; Data Release","startPage":"512","endPage":"526","ipdsId":"IP-097602","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":450624,"rank":3,"type":{"id":40,"text":"Open Access Publisher Index 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0000-0002-9903-9727","orcid":"https://orcid.org/0000-0002-9903-9727","contributorId":213747,"corporation":false,"usgs":true,"family":"Slone","given":"Daniel","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":840161,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Reaver, Kristen 0000-0003-2304-4674","orcid":"https://orcid.org/0000-0003-2304-4674","contributorId":213751,"corporation":false,"usgs":true,"family":"Reaver","given":"Kristen","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":840162,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hill, Jeffrey H.","contributorId":290023,"corporation":false,"usgs":false,"family":"Hill","given":"Jeffrey","email":"","middleInitial":"H.","affiliations":[{"id":62304,"text":"Tropical Aquaculture Laboratory, Institute of Food and Agricultural Sciences, University of 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,{"id":70230120,"text":"70230120 - 2021 - Method development for a short-term 7-day toxicity test with unionid mussels","interactions":[],"lastModifiedDate":"2022-03-30T11:34:30.447702","indexId":"70230120","displayToPublicDate":"2021-09-30T06:31:30","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1571,"text":"Environmental Toxicology and Chemistry","active":true,"publicationSubtype":{"id":10}},"title":"Method development for a short-term 7-day toxicity test with unionid mussels","docAbstract":"<div class=\"abstract-group\"><div class=\"article-section__content en main\"><p>The US Environmental Protection Agency's short-term freshwater effluent test methods include a fish (<i>Pimephales promelas</i>), a cladoceran (<i>Ceriodaphnia dubia</i>), and a green alga (<i>Raphidocelis subcapitata</i>). There is a recognized need for additional taxa to accompany the three standard species for effluent testing. An appropriate additional taxon is unionid mussels because mussels are widely distributed, live burrowed in sediment and filter particles from the water column for food, and exhibit high sensitivity to a variety of contaminants. Multiple studies were conducted to develop a relevant and robust short-term test method for mussels. We first evaluated the comparative sensitivity of two mussel species (<i>Villosa constricta</i><span>&nbsp;</span>and<span>&nbsp;</span><i>Lampsilis siliquoidea</i>) and two standard species (<i>P. promelas</i><span>&nbsp;</span>and<span>&nbsp;</span><i>C. dubia</i>) using two mock effluents prepared by mixing ammonia and five metals (cadmium, copper, nickel, lead, and zinc) or a field-collected effluent in 7-day exposures. Both mussel species were equally or more sensitive (more than two-fold) to effluents compared with the standard species. Next, we refined the mussel test method by first determining the best feeding rate of a commercial algal mixture for three age groups (1, 2, and 3 weeks old) of<span>&nbsp;</span><i>L. siliquoidea</i><span>&nbsp;</span>in a 7-day feeding experiment, and then used the derived optimal feeding rates to assess the sensitivity of the three ages of juveniles in a 7-day reference toxicant (sodium chloride [NaCl]) test. Juvenile mussels grew substantially (30%–52% length increase) when the 1- or 2-week-old mussels were fed 2 ml twice daily and the 3-week-old mussels were fed 3 ml twice daily. The 25% inhibition concentrations (IC25s) for NaCl were similar (314–520 mg Cl/L) among the three age groups, indicating that an age range of 1- to 3-week-old mussels can be used for a 7-day test. Finally, using the refined test method, we conducted an interlaboratory study among 13 laboratories to evaluate the performance of a 7-day NaCl test with<span>&nbsp;</span><i>L. siliquoidea</i>. Eleven laboratories successfully completed the test, with more than 80% control survival and reliable growth data. The IC25s ranged from 296 to 1076 mg Cl/L, with a low (34%) coefficient of variation, indicating that the proposed method for<span>&nbsp;</span><i>L. siliquoidea</i><span>&nbsp;</span>has acceptable precision.<span>&nbsp;</span><i>Environ Toxicol Chem</i><span>&nbsp;</span>2021;40:3392–3409. © 2021 SETAC</p></div></div>","language":"English","publisher":"Society for Environmental Toxicology and Chemistry (SETAC)","doi":"10.1002/etc.5225","usgsCitation":"Wang, N., Kunz, J.L., Hardesty, D.K., Steevens, J.A., Norberg-King, T.J., Hammer, E.J., Bauer, C.R., Augspurger, T., Dunn, S., Martinez, D., Barnhart, M., Murray, J., Bowersox, M., Roberts, J.F., Bringolf, R.B., Ratajczak, R., Ciparis, S., Cope, W.G., Buczek, S.B., Farrar, D., May, L., Garton, M., Gillis, P.L., Bennett, J., Salerno, J., Hester, B., Lockwood, R., Tarr, C., McIntyre, D., and Wardell, J., 2021, Method development for a short-term 7-day toxicity test with unionid mussels: Environmental Toxicology and Chemistry, v. 40, no. 12, p. 3392-3409, https://doi.org/10.1002/etc.5225.","productDescription":"18 p.","startPage":"3392","endPage":"3409","ipdsId":"IP-129506","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":436179,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P93O5K5G","text":"USGS data release","linkHelpText":"Chemical and biological data from a study on method development for a short term 7 day sodium chloride and mock effluent toxicity tests with unionid mussels"},{"id":397847,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"40","issue":"12","noUsgsAuthors":false,"publicationDate":"2021-09-30","publicationStatus":"PW","contributors":{"authors":[{"text":"Wang, Ning 0000-0002-2846-3352 nwang@usgs.gov","orcid":"https://orcid.org/0000-0002-2846-3352","contributorId":2818,"corporation":false,"usgs":true,"family":"Wang","given":"Ning","email":"nwang@usgs.gov","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":839138,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kunz, James L. 0000-0002-1027-158X jkunz@usgs.gov","orcid":"https://orcid.org/0000-0002-1027-158X","contributorId":3309,"corporation":false,"usgs":true,"family":"Kunz","given":"James","email":"jkunz@usgs.gov","middleInitial":"L.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":839139,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hardesty, Douglas K. 0000-0002-5840-795X dhardesty@usgs.gov","orcid":"https://orcid.org/0000-0002-5840-795X","contributorId":289438,"corporation":false,"usgs":true,"family":"Hardesty","given":"Douglas","email":"dhardesty@usgs.gov","middleInitial":"K.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":839140,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Steevens, Jeffery A. 0000-0003-3946-1229","orcid":"https://orcid.org/0000-0003-3946-1229","contributorId":207511,"corporation":false,"usgs":true,"family":"Steevens","given":"Jeffery","middleInitial":"A.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":839141,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Norberg-King, Teresa J.","contributorId":175087,"corporation":false,"usgs":false,"family":"Norberg-King","given":"Teresa","email":"","middleInitial":"J.","affiliations":[{"id":13485,"text":"U.S. Environmental Protection Agency, Duluth, MN","active":true,"usgs":false}],"preferred":false,"id":839142,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hammer, Edward J.","contributorId":150723,"corporation":false,"usgs":false,"family":"Hammer","given":"Edward","email":"","middleInitial":"J.","affiliations":[{"id":18077,"text":"U. 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,{"id":70225575,"text":"70225575 - 2021 - Quantifying Lake Ontario coregonine habitat use dynamic’s across space and time to inform assessment and restoration","interactions":[],"lastModifiedDate":"2021-10-26T11:05:37.60992","indexId":"70225575","displayToPublicDate":"2021-09-30T06:01:56","publicationYear":"2021","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":4,"text":"Other Government Series"},"displayTitle":"Quantifying Lake Ontario Coregonine Habitat Use Dynamic’s Across Space and Time to Inform Assessment and Restoration","title":"Quantifying Lake Ontario coregonine habitat use dynamic’s across space and time to inform assessment and restoration","docAbstract":"<p>No abstract available.</p>","largerWorkType":{"id":18,"text":"Report"},"largerWorkTitle":"Cooperative Science and Monitoring Initiative (CSMI) Lake Ontario 2018","largerWorkSubtype":{"id":4,"text":"Other Government Series"},"language":"English","publisher":"Indiana Illinois Sea Grant, New York Sea Grant","usgsCitation":"Weidel, B., Brown, T., Connerton, M., Holden, J., and Gorsky, D., 2021, Quantifying Lake Ontario coregonine habitat use dynamic’s across space and time to inform assessment and restoration, 16 p.","productDescription":"16 p.","startPage":"70","endPage":"85","ipdsId":"IP-126554","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":390888,"type":{"id":15,"text":"Index Page"},"url":"https://seagrant.sunysb.edu//Images/Uploads/PDFs/GreatLakes-CSMI-LakeOntario-Report-2018.pdf"},{"id":390947,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada, United States","otherGeospatial":"Lake Ontario","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -80.2001953125,\n              43.100982876188546\n            ],\n            [\n              -75.60791015625,\n              43.100982876188546\n            ],\n            [\n              -75.60791015625,\n              44.465151013519616\n            ],\n            [\n              -80.2001953125,\n              44.465151013519616\n            ],\n            [\n              -80.2001953125,\n              43.100982876188546\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Weidel, Brian 0000-0001-6095-2773 bweidel@usgs.gov","orcid":"https://orcid.org/0000-0001-6095-2773","contributorId":2485,"corporation":false,"usgs":true,"family":"Weidel","given":"Brian","email":"bweidel@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":825656,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Brown, Taylor","contributorId":267945,"corporation":false,"usgs":false,"family":"Brown","given":"Taylor","affiliations":[{"id":12722,"text":"Cornell University","active":true,"usgs":false}],"preferred":false,"id":825657,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Connerton, Michael","contributorId":251649,"corporation":false,"usgs":false,"family":"Connerton","given":"Michael","affiliations":[{"id":13678,"text":"New York State Department of Environmental Conservation","active":true,"usgs":false}],"preferred":false,"id":825658,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Holden, Jeremy","contributorId":139654,"corporation":false,"usgs":false,"family":"Holden","given":"Jeremy","affiliations":[{"id":12864,"text":"OMNRF","active":true,"usgs":false}],"preferred":false,"id":825659,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Gorsky, Dimitry","contributorId":251650,"corporation":false,"usgs":false,"family":"Gorsky","given":"Dimitry","affiliations":[{"id":6661,"text":"US Fish and Wildlife Service","active":true,"usgs":false}],"preferred":false,"id":825660,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70224602,"text":"sir20215078 - 2021 - Characterization of water resources in the Big Lost River Basin, south-central Idaho","interactions":[{"subject":{"id":70224329,"text":"sir20215078A - 2021 - Hydrogeologic framework of the Big Lost River Basin, south-central Idaho, chap. A of Zinsser, L.M., ed., Characterization of water resources in the Big Lost River Basin, south-central Idaho","indexId":"sir20215078A","publicationYear":"2021","noYear":false,"chapter":"A","displayTitle":"Hydrogeologic Framework of the Big Lost River Basin, South-Central Idaho","title":"Hydrogeologic framework of the Big Lost River Basin, south-central Idaho, chap. 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This multichapter volume documents the findings of a hydrogeologic investigation of the Big Lost River Basin that was jointly conducted by the U.S. Geological Survey, Idaho Department of Water Resources, and Idaho Geological Survey from 2018 through 2021. Chapter A (Zinsser, 2021) describes the hydrogeologic framework of the Big Lost River Basin. The framework presents a conceptual definition of four hydrogeologic units, a three-dimensional hydrogeologic framework model representing the spatial occurrence of the hydrogeologic units, and a description of groundwater occurrence and movement. Chapter B (Dudunake and Zinsser, 2021) describes streamflow gains from and losses to groundwater in the Big Lost River between Mackay Reservoir and south of Arco. Streamflow losses and gains were estimated from a series of four measurement events completed during spring and fall conditions from 2019 to 2021. Chapter C (Clark, 2022) describes budgets for the Big Lost River Basin from 2000 to 2019. 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,{"id":70224607,"text":"sir20215078B - 2021 - Surface-water and groundwater interactions in the Big Lost River, south-central Idaho","interactions":[{"subject":{"id":70224607,"text":"sir20215078B - 2021 - Surface-water and groundwater interactions in the Big Lost River, south-central Idaho","indexId":"sir20215078B","publicationYear":"2021","noYear":false,"chapter":"B","displayTitle":"Surface-Water and Groundwater Interactions in the Big Lost River, South-Central Idaho","title":"Surface-water and groundwater interactions in the Big Lost River, south-central Idaho"},"predicate":"IS_PART_OF","object":{"id":70224602,"text":"sir20215078 - 2021 - Characterization of water resources in the Big Lost River Basin, south-central Idaho","indexId":"sir20215078","publicationYear":"2021","noYear":false,"title":"Characterization of water resources in the Big Lost River Basin, south-central Idaho"},"id":1}],"isPartOf":{"id":70224602,"text":"sir20215078 - 2021 - Characterization of water resources in the Big Lost River Basin, south-central Idaho","indexId":"sir20215078","publicationYear":"2021","noYear":false,"title":"Characterization of water resources in the Big Lost River Basin, south-central Idaho"},"lastModifiedDate":"2024-06-26T15:45:09.223697","indexId":"sir20215078B","displayToPublicDate":"2021-09-29T13:34:18","publicationYear":"2021","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2021-5078","chapter":"B","displayTitle":"Surface-Water and Groundwater Interactions in the Big Lost River, South-Central Idaho","title":"Surface-water and groundwater interactions in the Big Lost River, south-central Idaho","docAbstract":"<p>The Big Lost River of south-central Idaho interacts with the underlying aquifer by gaining and losing streamflow throughout various areas in the Big Lost River Valley. Surface-water and groundwater resources are used throughout the valley to sustain domestic, agricultural, and livestock needs. The U.S. Geological Survey, in cooperation with the Idaho Department of Water Resources, evaluated streamflow gains and losses by differential streamgaging in the lower Big Lost River, Idaho, during four measurement events: March 27–28, 2019; October 16–17, 2019; October 6–7, 2020; and March 30, 2021. This report presents and analyzes streamflow measurement and uncertainty data from each measurement event to describe surface-water/groundwater interactions. This report is the second chapter of a multi-chapter volume that characterizes water resources in the Big Lost River Basin.</p><p>During the four measurement events, 100 streamflow measurements were made at 46 unique sites on the Big Lost River, James Creek, and diversions or tributaries between Mackay Reservoir near Mackay and Arco, Idaho. Aquifer lithology and dimensions affected spatial patterns of streamflow gains and losses between the upper, middle, and lower reaches; changes in water supply, groundwater levels, and surface-water management affected seasonal differences within reaches. In the upper reach of the Big Lost River, streamflow losses and gains were greater during the wetter 2019 events and lesser during the drier 2020 and 2021 events. The middle reach includes the largest losses from the Big Lost River to groundwater; these losses occurred in the Darlington Sinks where 42 percent or more of streamflow was lost as the aquifer widens and groundwater deepens. These results suggest that changing surface-water supply, irrigation use, and recharge affect interannual groundwater levels and, in turn, affect patterns of streamflow gains and losses in the middle reach. Finally, surface-water management is the primary control on surface-water/groundwater interactions in the lower reach. Overall patterns of streamflow gains and losses in this study generally were consistent with previous reports. However, paired with the related hydrogeologic framework and water budget, this investigation provides new insights into how hydrogeologic conditions and interannual variability in water supply, groundwater levels, and surface-water management affect surface-water/groundwater interactions in the Big Lost River Valley.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20215078B","collaboration":"Prepared in cooperation with the Idaho Department of Water Resources","usgsCitation":"Dudunake, T.J., and Zinsser, L.M., 2021, Surface-water and groundwater interactions in the Big Lost River, south-central Idaho, chap. B <em>of</em> Zinsser, L.M., ed., Characterization of water resources in the Big Lost River Basin, south-central Idaho: U.S. Geological Survey Scientific Investigations Report 2021–5078–B, 33 p., https://doi.org/10.3133/sir20215078B.","productDescription":"vii, 33 p.","onlineOnly":"Y","ipdsId":"IP-125229","costCenters":[{"id":343,"text":"Idaho Water Science Center","active":true,"usgs":true}],"links":[{"id":409272,"rank":5,"type":{"id":25,"text":"Version History"},"url":"https://pubs.usgs.gov/sir/2021/5078/b/versionHist.txt","size":"1 KB","linkFileType":{"id":2,"text":"txt"},"description":"SIR 2021-5078B Version History"},{"id":396946,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2021/5078/b/images"},{"id":396945,"rank":3,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2021/5078/b/sir20215078B.XML"},{"id":390009,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2021/5078/b/sir20215078B.pdf","text":"Report","size":"3.8 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2021-5078B"},{"id":390008,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2021/5078/b/coverthb.jpg"}],"country":"United States","state":"Idaho","otherGeospatial":"Big Lost River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -114.16992187499999,\n              43.22919511396498\n            ],\n            [\n              -112.82958984374999,\n              43.22919511396498\n            ],\n            [\n              -112.82958984374999,\n              44.18220395771566\n            ],\n            [\n              -114.16992187499999,\n              44.18220395771566\n            ],\n            [\n              -114.16992187499999,\n              43.22919511396498\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"mailto:dc_or@usgs.gov\" data-mce-href=\"mailto:dc_or@usgs.gov\">Director</a>, <a href=\"https://www.usgs.gov/centers/id-water\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/centers/id-water\">Idaho Water Science Center</a><br>U.S. Geological Survey<br>230 Collins Road<br>Boise, Idaho 83702-4520</p>","tableOfContents":"<ul><li>Preface</li><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Methods</li><li>Results for Streamflow Gains and Losses</li><li>Discussion</li><li>Summary</li><li>References Cited</li></ul>","publishedDate":"2021-09-29","revisedDate":"2022-11-09","noUsgsAuthors":false,"publicationDate":"2021-09-29","publicationStatus":"PW","contributors":{"authors":[{"text":"Dudunake, Taylor J. 0000-0001-7650-2419 tdudunake@usgs.gov","orcid":"https://orcid.org/0000-0001-7650-2419","contributorId":213485,"corporation":false,"usgs":true,"family":"Dudunake","given":"Taylor","email":"tdudunake@usgs.gov","middleInitial":"J.","affiliations":[{"id":343,"text":"Idaho Water Science Center","active":true,"usgs":true}],"preferred":false,"id":824249,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Zinsser, Lauren M. 0000-0002-8582-066X","orcid":"https://orcid.org/0000-0002-8582-066X","contributorId":205756,"corporation":false,"usgs":true,"family":"Zinsser","given":"Lauren","email":"","middleInitial":"M.","affiliations":[{"id":343,"text":"Idaho Water Science Center","active":true,"usgs":true}],"preferred":true,"id":824250,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70224966,"text":"70224966 - 2021 - Ecosystem carbon balance in the Hawaiian Islands under different scenarios of future climate and land use change","interactions":[],"lastModifiedDate":"2021-10-11T15:31:10.463876","indexId":"70224966","displayToPublicDate":"2021-09-29T10:27:46","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1562,"text":"Environmental Research Letters","active":true,"publicationSubtype":{"id":10}},"title":"Ecosystem carbon balance in the Hawaiian Islands under different scenarios of future climate and land use change","docAbstract":"<p><span>The State of Hawai'i passed legislation to be carbon neutral by 2045, a goal that will partly depend on carbon sequestration by terrestrial ecosystems. However, there is considerable uncertainty surrounding the future direction and magnitude of the land carbon sink in the Hawaiian Islands. We used the Land Use and Carbon Scenario Simulator (LUCAS), a spatially explicit stochastic simulation model that integrates landscape change and carbon gain-loss, to assess how projected future changes in climate and land use will influence ecosystem carbon balance in the Hawaiian Islands under all combinations of two radiative forcing scenarios (RCPs 4.5 and 8.5) and two land use scenarios (low and high) over a 90 year timespan from 2010 to 2100. Collectively, terrestrial ecosystems of the Hawaiian Islands acted as a net carbon sink under low radiative forcing (RCP 4.5) for the entire 90 year simulation period, with low land use change further enhancing carbon sink strength. In contrast, Hawaiian terrestrial ecosystems transitioned from a net sink to a net source of CO</span><sub>2</sub><span>&nbsp;to the atmosphere under high radiative forcing (RCP 8.5), with high land use accelerating this transition and exacerbating net carbon loss. A sensitivity test of the CO</span><sub>2</sub><span>&nbsp;fertilization effect on plant productivity revealed it to be a major source of uncertainty in projections of ecosystem carbon balance, highlighting the need for greater mechanistic understanding of plant productivity responses to rising atmospheric CO</span><sub>2</sub><span>. Long-term model projections such as ours that incorporate the interactive effects of land use and climate change on regional ecosystem carbon balance will be critical to evaluating the potential of ecosystem-based climate mitigation strategies.</span></p>","language":"English","publisher":"IOP Publishing","doi":"10.1088/1748-9326/ac2347","usgsCitation":"Selmants, P., Sleeter, B.M., Liu, J., Wilson, T., Trauernicht, C., Frazier, A.G., and Asner, G.P., 2021, Ecosystem carbon balance in the Hawaiian Islands under different scenarios of future climate and land use change: Environmental Research Letters, v. 16, 104020, 14 p., https://doi.org/10.1088/1748-9326/ac2347.","productDescription":"104020, 14 p.","ipdsId":"IP-119813","costCenters":[{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"links":[{"id":450627,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1088/1748-9326/ac2347","text":"Publisher Index Page"},{"id":436181,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9AWLFKZ","text":"USGS data release","linkHelpText":"Land change and carbon balance projections for the Hawaiian Islands"},{"id":390387,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United 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,{"id":70268411,"text":"70268411 - 2021 - Understanding genetics for successful conservation and restoration of resilient Chesapeake Bay brook trout populations","interactions":[],"lastModifiedDate":"2025-06-25T14:13:55.200306","indexId":"70268411","displayToPublicDate":"2021-09-29T09:12:29","publicationYear":"2021","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":3,"text":"Organization Series"},"title":"Understanding genetics for successful conservation and restoration of resilient Chesapeake Bay brook trout populations","docAbstract":"Traditionally, fisheries management has focused on the abundance, distribution, and size structure of populations. Although these factors remain key aspects of management, a large and growing body of evidence highlights the importance of genetics in conserving wild populations, especially when populations are small and isolated (Frankham et al. 2017). Local adaptations are very common among fishes and help populations cope with specific conditions in their local environment (Fraser et al. 2011). The field of conservation genetics and genomics is highly technical and has advanced rapidly in recent years, offering a wealth of information to support brook trout conservation and restoration. A major impediment to successfully incorporating these advances into conservation outcomes is that most fisheries managers have only a basic understanding of fish genetics and its relevance to their management decisions.","language":"English","publisher":"STAC","usgsCitation":"Kazyak, D.C., Hallerman, E.M., Maloney, L., Faulkner, S., Welsh, A., Coombs, J., Whiteley, A., Rash, J., White, S.L., Bartron, M.L., Kulp, M.A., and Meek, M., 2021, Understanding genetics for successful conservation and restoration of resilient Chesapeake Bay brook trout populations, HTML Document.","productDescription":"HTML Document","ipdsId":"IP-173712","costCenters":[{"id":50464,"text":"Eastern Ecological Science Center","active":true,"usgs":true}],"links":[{"id":491275,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":491274,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.chesapeake.org/stac/events/understanding-genetics-for-successful-conservation-and-restoration-of-resilient-chesapeake-bay-brook-trout-populations/","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"Maryland, Virginia","otherGeospatial":"Chesapeake Bay region","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -75.71040420312731,\n              39.694677079680844\n            ],\n            [\n              -76.93796273435163,\n              39.694677079680844\n            ],\n            [\n              -76.93796273435163,\n              37.158701995783204\n            ],\n            [\n              -75.71040420312731,\n              37.158701995783204\n            ],\n            [\n              -75.71040420312731,\n              39.694677079680844\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationDate":"2021-09-29","publicationStatus":"PW","contributors":{"authors":[{"text":"Kazyak, David C. 0000-0001-9860-4045","orcid":"https://orcid.org/0000-0001-9860-4045","contributorId":140409,"corporation":false,"usgs":true,"family":"Kazyak","given":"David","email":"","middleInitial":"C.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":941248,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hallerman, E. M.","contributorId":280251,"corporation":false,"usgs":false,"family":"Hallerman","given":"E.","email":"","middleInitial":"M.","affiliations":[{"id":25550,"text":"Virginia Polytechnic Institute and State University","active":true,"usgs":false}],"preferred":false,"id":941251,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Maloney, Lori","contributorId":357372,"corporation":false,"usgs":false,"family":"Maloney","given":"Lori","affiliations":[],"preferred":false,"id":941304,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Faulkner, Stephen 0000-0001-5295-1383 faulkners@usgs.gov","orcid":"https://orcid.org/0000-0001-5295-1383","contributorId":146152,"corporation":false,"usgs":true,"family":"Faulkner","given":"Stephen","email":"faulkners@usgs.gov","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":941305,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Welsh, Amy","contributorId":287823,"corporation":false,"usgs":false,"family":"Welsh","given":"Amy","affiliations":[{"id":12432,"text":"West Virginia University","active":true,"usgs":false}],"preferred":false,"id":941252,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Coombs, Jason","contributorId":205478,"corporation":false,"usgs":false,"family":"Coombs","given":"Jason","affiliations":[{"id":7134,"text":"USFS","active":true,"usgs":false}],"preferred":false,"id":941306,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Whiteley, Andrew","contributorId":299020,"corporation":false,"usgs":false,"family":"Whiteley","given":"Andrew","affiliations":[{"id":48908,"text":"U Montana","active":true,"usgs":false}],"preferred":false,"id":941307,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Rash, Jake","contributorId":357373,"corporation":false,"usgs":false,"family":"Rash","given":"Jake","affiliations":[],"preferred":false,"id":941308,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"White, Shannon L. 0000-0003-4687-6596","orcid":"https://orcid.org/0000-0003-4687-6596","contributorId":263424,"corporation":false,"usgs":true,"family":"White","given":"Shannon","email":"","middleInitial":"L.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":941249,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Bartron, Meredith L.","contributorId":149109,"corporation":false,"usgs":false,"family":"Bartron","given":"Meredith","email":"","middleInitial":"L.","affiliations":[{"id":26874,"text":"USFWS, Lamar, PA","active":true,"usgs":false},{"id":6678,"text":"U.S. Fish and Wildlife Service, Alaska Maritime National Wildlife Refuge","active":true,"usgs":false}],"preferred":false,"id":941250,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Kulp, Matt A.","contributorId":196801,"corporation":false,"usgs":false,"family":"Kulp","given":"Matt","email":"","middleInitial":"A.","affiliations":[{"id":35484,"text":"National Park Service, Great Smoky Mountains National Park","active":true,"usgs":false}],"preferred":false,"id":941309,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Meek, Mariah","contributorId":260835,"corporation":false,"usgs":false,"family":"Meek","given":"Mariah","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":941310,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70225742,"text":"70225742 - 2021 - Effect of an algal amendment on the microbial conversion of coal to methane at different sulfate concentrations from the Powder River Basin, USA","interactions":[],"lastModifiedDate":"2021-11-09T14:39:08.788372","indexId":"70225742","displayToPublicDate":"2021-09-29T08:34:55","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2033,"text":"International Journal of Coal Geology","active":true,"publicationSubtype":{"id":10}},"title":"Effect of an algal amendment on the microbial conversion of coal to methane at different sulfate concentrations from the Powder River Basin, USA","docAbstract":"<p><span>Biogenic methane is estimated to account for one-fifth of the natural gas worldwide and there is great interest in controlling methane from different sources. Biogenic coalbed methane (CBM) production relies on syntrophic associations between fermentative bacteria and methanogenic archaea to anaerobically degrade recalcitrant coal and produce methanogenic substrates. However, very little is known about how differences in&nbsp;geochemistry, hydrology, and&nbsp;microbial community&nbsp;composition influence subsurface carbon utilization and CBM production. The addition of an amendment consisting of&nbsp;microalgal biomass&nbsp;has previously been shown to increase CBM production while providing the possibility of a closed-loop fossil system where waste (production water) is used to grow algae to ultimately produce energy (methane). However, the efficiency of enhancing CBM production under different&nbsp;redox conditions&nbsp;remains unresolved. In this study, we focused on the&nbsp;U.S.&nbsp;Geological Survey's Birney test site (Montana, USA) that has nine wells vertically accessing four&nbsp;coal seams&nbsp;with varying geochemistry (low and high&nbsp;sulfate&nbsp;(SO</span><sub>4</sub><sup>2−</sup><span>)) and methane production rates. We used organic matter (OM) in the form of&nbsp;algal biomass&nbsp;to discern the effect of this amendment on OM degradation and microbially enhanced CBM production potential under different geochemical constraints. We tracked changes in community composition, OM composition, organic carbon (OC) concentration, methane production, and nutrients in batch systems over six months. Methane production was detected only in&nbsp;microcosms&nbsp;from low SO</span><sub>4</sub><sup>2−</sup><span>&nbsp;wells (168 to 800&nbsp;μg methane per gram of coal). The&nbsp;OC&nbsp;consumption varied across time for all wells and the variation was greatest for the low SO</span><sub>4</sub><sup>2−</sup><span>&nbsp;wells. Different groups of syntrophic bacteria were associated with net‑carbon consuming microcosms, and specifically&nbsp;</span><i>Syntrophorhabdus</i><span>&nbsp;was identified with several different statistical methods as a potentially important coal degrader. Results from this study provide insight into potential coal-degraders, the compositional changes in some of the different OM fractions, and trends in carbon consumption related to methane production across coal seams along the vertical SO</span><sub>4</sub><sup>2−</sup><span>&nbsp;gradient.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.coal.2021.103860","usgsCitation":"Smith, H.J., Schweitzer, H.S., Barnhart, E.P., Orem, W.H., Gerlach, R., and Fields, M.W., 2021, Effect of an algal amendment on the microbial conversion of coal to methane at different sulfate concentrations from the Powder River Basin, USA: International Journal of Coal Geology, v. 248, 103860, 16 p., https://doi.org/10.1016/j.coal.2021.103860.","productDescription":"103860, 16 p.","ipdsId":"IP-106713","costCenters":[{"id":5050,"text":"WY-MT Water Science Center","active":true,"usgs":true}],"links":[{"id":450630,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://hdl.handle.net/10037/24259","text":"External Repository"},{"id":391509,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Montana, Wyoming","otherGeospatial":"Powder River basin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -105.75439453125,\n              41.409775832009565\n            ],\n            [\n              -104.765625,\n              41.83682786072714\n            ],\n            [\n              -104.23828125,\n              44.59046718130883\n            ],\n            [\n              -104.9853515625,\n              46.649436163350245\n            ],\n            [\n              -106.58935546875,\n              46.7549166192819\n            ],\n            [\n              -108.1494140625,\n              46.51351558059737\n            ],\n            [\n              -108.12744140625,\n              45.38301927899065\n            ],\n            [\n              -106.41357421875,\n              43.6599240747891\n            ],\n            [\n              -105.99609375,\n              41.83682786072714\n            ],\n            [\n              -105.75439453125,\n              41.409775832009565\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"248","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Smith, Heidi J.","contributorId":268344,"corporation":false,"usgs":false,"family":"Smith","given":"Heidi","email":"","middleInitial":"J.","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":826465,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schweitzer, Hannah S.","contributorId":268345,"corporation":false,"usgs":false,"family":"Schweitzer","given":"Hannah","email":"","middleInitial":"S.","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":826466,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Barnhart, Elliott P. 0000-0002-8788-8393","orcid":"https://orcid.org/0000-0002-8788-8393","contributorId":203225,"corporation":false,"usgs":true,"family":"Barnhart","given":"Elliott","middleInitial":"P.","affiliations":[{"id":5050,"text":"WY-MT Water Science Center","active":true,"usgs":true}],"preferred":true,"id":826467,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Orem, William H. 0000-0003-4990-0539 borem@usgs.gov","orcid":"https://orcid.org/0000-0003-4990-0539","contributorId":577,"corporation":false,"usgs":true,"family":"Orem","given":"William","email":"borem@usgs.gov","middleInitial":"H.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":826468,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Gerlach, Robin","contributorId":203247,"corporation":false,"usgs":false,"family":"Gerlach","given":"Robin","email":"","affiliations":[{"id":36555,"text":"Montana State University","active":true,"usgs":false}],"preferred":false,"id":826469,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Fields, Matthew W.","contributorId":172391,"corporation":false,"usgs":false,"family":"Fields","given":"Matthew","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":826470,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70224919,"text":"70224919 - 2021 - Compositional evolution of organic matter in Boquillas Shale across a thermal gradient at the single particle level","interactions":[],"lastModifiedDate":"2021-10-05T12:42:29.156695","indexId":"70224919","displayToPublicDate":"2021-09-29T07:40:03","publicationYear":"2021","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2033,"text":"International Journal of Coal Geology","active":true,"publicationSubtype":{"id":10}},"title":"Compositional evolution of organic matter in Boquillas Shale across a thermal gradient at the single particle level","docAbstract":"<div id=\"abstracts\" class=\"Abstracts u-font-serif\"><div id=\"ab0005\" class=\"abstract author\" lang=\"en\"><div id=\"as0005\"><p id=\"sp0055\"><span>The molecular composition of petroliferous organic matter and its compositional evolution throughout thermal maturation provides insight for understanding petroleum generation. This information is critical for understanding&nbsp;hydrocarbon resources&nbsp;in unconventional reservoirs, as source rock organic matter is highly dispersed, in contact with the surrounding mineral matrix, and may occur as multiple organic matter&nbsp;maceral&nbsp;types. Here,&nbsp;</span>Raman spectroscopy<span>&nbsp;and&nbsp;optical microscopy&nbsp;approaches were applied to a marginally mature (vitrinite reflectance ~0.5%) sample of the&nbsp;Late Cretaceous&nbsp;Boquillas Shale before and after&nbsp;hydrous pyrolysis&nbsp;(HP) at 300&nbsp;°C and 330&nbsp;°C for 72&nbsp;h. This analytical approach allowed for correlative examination of micro-scale changes in organic matter compositional properties (e.g., aromaticity) for a variety of organic matter macerals across a&nbsp;thermal gradient&nbsp;(from marginally mature into the late oil/wet gas window) at the single particle level. Results indicate that while the examined amorphous organic matter, solid&nbsp;bitumen, and&nbsp;vitrinite&nbsp;particles exhibit different aromatic signatures in the unheated shale, they effectively progress along a similar trend through composition space with thermal maturation. Examined&nbsp;inertinite&nbsp;fragments were generally insensitive to the applied thermal stress, reinforcing the idea that&nbsp;reservoir temperature&nbsp;may be secondary for dictating the molecular composition of inertinite. Additional analysis of&nbsp;Raman spectra&nbsp;for individual organic matter macerals was performed using multivariate curve resolution (MCR) and correlation of standard Raman and reflectance-derived&nbsp;thermal maturity&nbsp;proxies against MCR parameters shows consistent trends. This trend suggests that MCR may be a fast and statistically robust method for extracting compositional information from Raman spectra of sedimentary organic matter, and can be used to construct thermal maturity relationships. These findings inform our understanding of how different petroliferous organic matter maceral types evolve throughout&nbsp;thermal reactions&nbsp;and further demonstrate that Raman spectroscopy combined with&nbsp;petrographic analysis&nbsp;can provide complementary estimates of organic matter composition and thermal maturity.</span></p></div></div></div>","language":"English","publisher":"Elsevier","doi":"10.1016/j.coal.2021.103859","usgsCitation":"Birdwell, J.E., Jubb, A., Hackley, P.C., and Hatcherian, J.J., 2021, Compositional evolution of organic matter in Boquillas Shale across a thermal gradient at the single particle level: International Journal of Coal Geology, v. 248, 103859, 11 p., https://doi.org/10.1016/j.coal.2021.103859.","productDescription":"103859, 11 p.","ipdsId":"IP-126536","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true},{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true},{"id":255,"text":"Energy Resources Program","active":true,"usgs":true}],"links":[{"id":450634,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.coal.2021.103859","text":"Publisher Index Page"},{"id":390237,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"248","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Birdwell, Justin E. 0000-0001-8263-1452 jbirdwell@usgs.gov","orcid":"https://orcid.org/0000-0001-8263-1452","contributorId":3302,"corporation":false,"usgs":true,"family":"Birdwell","given":"Justin","email":"jbirdwell@usgs.gov","middleInitial":"E.","affiliations":[{"id":569,"text":"Southwest Climate Science Center","active":true,"usgs":true},{"id":255,"text":"Energy Resources Program","active":true,"usgs":true},{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824606,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jubb, Aaron M. 0000-0001-6875-1079","orcid":"https://orcid.org/0000-0001-6875-1079","contributorId":201978,"corporation":false,"usgs":true,"family":"Jubb","given":"Aaron M.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":824605,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hackley, Paul C. 0000-0002-5957-2551 phackley@usgs.gov","orcid":"https://orcid.org/0000-0002-5957-2551","contributorId":592,"corporation":false,"usgs":true,"family":"Hackley","given":"Paul","email":"phackley@usgs.gov","middleInitial":"C.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true},{"id":255,"text":"Energy Resources Program","active":true,"usgs":true}],"preferred":true,"id":824607,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hatcherian, Javin J. 0000-0001-9151-6798 jhatcherian@usgs.gov","orcid":"https://orcid.org/0000-0001-9151-6798","contributorId":195770,"corporation":false,"usgs":true,"family":"Hatcherian","given":"Javin","email":"jhatcherian@usgs.gov","middleInitial":"J.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true},{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true}],"preferred":true,"id":824608,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
]}