{"pageNumber":"567","pageRowStart":"14150","pageSize":"25","recordCount":165309,"records":[{"id":70216697,"text":"70216697 - 2020 - Permafrost hydrogeology","interactions":[],"lastModifiedDate":"2020-12-01T13:39:38.019573","indexId":"70216697","displayToPublicDate":"2020-08-29T07:38:34","publicationYear":"2020","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"Permafrost hydrogeology","docAbstract":"<p id=\"Par3\" class=\"Para\">Groundwater processes are often overlooked in permafrost environments, but subsurface storage and routing can strongly influence water and biogeochemical cycling in northern catchments. Groundwater flow in permafrost regions is controlled by the temporal and spatial distribution of frozen ground, causing the hydrogeologic framework to be temperature-dependent. Most flow occurs in geologic units above the permafrost table (supra-permafrost aquifers) or below the permafrost base (sub-permafrost aquifers). In the context of climate change, thawing permafrost is altering groundwater flowpaths and thereby inducing positive trends in river baseflow in many discontinuous permafrost basins. Activated groundwater systems can provide new conduits for flushing Arctic basins and transporting nutrients to basin outlets. The thermal and hydraulic physics that govern groundwater flow in permafrost regions are strongly coupled and more complex than those in non-permafrost settings. Recent research activity in permafrost hydrogeological modeling has resulted in several mainstream groundwater models (e.g., SUTRA, FEFLOW, HYDRUS) offering users advanced capabilities for simulating processes in aquifers that experience dynamic freeze-thaw. This chapter relies on field examples to review key processes and conditions that control groundwater dynamics in permafrost settings and presents an up-to-date synthesis of the mathematical representation of heat transfer and groundwater flow in northern landscapes.</p><div id=\"cobranding-and-download-availability-text\" class=\"note test-pdf-link\"><br></div>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Arctic hydrology, permafrost and ecosystems","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"Springer","doi":"10.1007/978-3-030-50930-9_17","usgsCitation":"Kurylyk, B.L., and Walvoord, M.A., 2020, Permafrost hydrogeology, chap. <i>of</i> Arctic hydrology, permafrost and ecosystems, p. 493-523, https://doi.org/10.1007/978-3-030-50930-9_17.","productDescription":"31 p.","startPage":"493","endPage":"523","ipdsId":"IP-095432","costCenters":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"links":[{"id":380908,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"noUsgsAuthors":false,"publicationDate":"2020-08-29","publicationStatus":"PW","contributors":{"authors":[{"text":"Kurylyk, Barret L.","contributorId":176296,"corporation":false,"usgs":false,"family":"Kurylyk","given":"Barret","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":805914,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Walvoord, Michelle A. 0000-0003-4269-8366","orcid":"https://orcid.org/0000-0003-4269-8366","contributorId":211843,"corporation":false,"usgs":true,"family":"Walvoord","given":"Michelle","email":"","middleInitial":"A.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":805915,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70212813,"text":"cir1467 - 2020 - Woods Hole Coastal and Marine Science Center—2019 annual report","interactions":[],"lastModifiedDate":"2020-08-31T12:22:20.693366","indexId":"cir1467","displayToPublicDate":"2020-08-28T15:15:00","publicationYear":"2020","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":307,"text":"Circular","code":"CIR","onlineIssn":"2330-5703","printIssn":"1067-084X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"1467","displayTitle":"Woods Hole Coastal and Marine Science Center—2019 Annual Report","title":"Woods Hole Coastal and Marine Science Center—2019 annual report","docAbstract":"<p>The 2019 annual report of the U.S. Geological Survey Woods Hole Coastal and Marine Science Center highlights accomplishments of 2019, includes a list of 2019 publications, and summarizes the work of the center, as well as the work of each of its science groups. This product allows readers to gain a general understanding of the focus areas of the center’s scientific research and learn more about specific projects and progress made throughout 2019, all while enjoying interesting photographs taken in various environments and laboratories, and applicable maps and figures.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/cir1467","usgsCitation":"Ernst, S., 2020, Woods Hole Coastal and Marine Science Center—2019 annual report: U.S. Geological Survey Circular 1467, 36 p., https://doi.org/10.3133/cir1467.","productDescription":"iv, 36 p.","numberOfPages":"36","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-117142","costCenters":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":377980,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/circ/1467/coverthb.jpg"},{"id":377981,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/circ/1467/cir1467.pdf","text":"Report","size":"6.18 MB","linkFileType":{"id":1,"text":"pdf"},"description":"CIR 1467"}],"contact":"<p><a href=\"mailto:WHSC_science_director@usgs.gov\" data-mce-href=\"mailto:WHSC_science_director@usgs.gov\">Director</a>, <a href=\"https://www.usgs.gov/centers/whcmsc\" data-mce-href=\"https://www.usgs.gov/centers/whcmsc\">Woods Hole Coastal and Marine Science Center</a><br>U.S. Geological Survey<br>384 Woods Hole Road<br>Quissett Campus<br>Woods Hole, MA 02543–1598<br></p>","tableOfContents":"<ul><li>Coastal and Marine Science Based in Woods Hole, Massachusetts</li><li>Coastal and Shelf Geology</li><li>Sediment Transport</li><li>Energy and Geohazards</li><li>Environmental Geoscience</li><li>Sea-Floor Mapping</li><li>Information Science</li><li>2019 Publications</li></ul>","publishingServiceCenter":{"id":11,"text":"Pembroke PSC"},"publishedDate":"2020-08-28","noUsgsAuthors":false,"publicationDate":"2020-08-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Ernst, Sara 0000-0001-7825-3209","orcid":"https://orcid.org/0000-0001-7825-3209","contributorId":219205,"corporation":false,"usgs":true,"family":"Ernst","given":"Sara","affiliations":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":797541,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70206398,"text":"sir20195130 - 2020 - Use of boosted regression trees to quantify cumulative instream flow resulting from curtailment of irrigation in the Sprague River basin, Oregon","interactions":[],"lastModifiedDate":"2020-08-31T12:30:21.007926","indexId":"sir20195130","displayToPublicDate":"2020-08-28T09:28:00","publicationYear":"2020","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-5130","displayTitle":"Use of Boosted Regression Trees to Quantify Cumulative Instream Flow Resulting from Curtailment of Irrigation in the Sprague River Basin, Oregon","title":"Use of boosted regression trees to quantify cumulative instream flow resulting from curtailment of irrigation in the Sprague River basin, Oregon","docAbstract":"A boosted regression trees (BRT) approach was used to estimate the amount by which streamflow is increased when irrigation is regulated (curtailed) upstream of a streamgage on the Sprague River in southern-central Oregon. The BRT approach differs from most other approaches that require baseline conditions for comparison, where those baseline conditions are determined from past observations by searching for hydrologically similar years when irrigation was not regulated. Such baseline conditions are always imperfect estimates of the true baseline conditions. The BRT approach instead estimates unique baseline conditions for any year in which irrigation is regulated by calculating the baseline condition based on measurements of precipitation and weather observations that determine evapotranspiration, and other measurements that are proxies for the effects of climate and regional groundwater pumping on water-table elevation, using a model that has been trained in years of no regulation. The amount by which streamflow is increased by regulation is then calculated by subtracting the estimated baseline conditions from the measured streamflow. The approach is challenged by the fact that the streamflow increase may be a small fraction of the total streamflow; nonetheless, during 2 years in which regulation was started early and was implemented consistently through the season, the increased flow made up about one third of the flow past the streamgage during the regulation period. An advantage of this approach is that with rigorous model testing with holdout data, the threshold for detecting streamflow increase and intervals around the estimates of increase at a desired level of confidence can be quantified. The model relies on datasets that are readily available and updated continuously and therefore can be used operationally to inform resource management.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20195130","collaboration":"Prepared in cooperation with the Bureau of Reclamation<br />(Interagency Agreement R16PG00120)","usgsCitation":"Wood, T.M., 2019, Use of boosted regression trees to quantify cumulative instream flow resulting from curtailment of irrigation in the Sprague River basin, Oregon: U.S. Geological Survey Scientific Investigations Report 2019-5130, 25 p., https://doi.org/10.3133/sir20195130.","productDescription":"vi, 25 p.","onlineOnly":"Y","ipdsId":"IP-100543","costCenters":[{"id":518,"text":"Oregon Water Science Center","active":true,"usgs":true}],"links":[{"id":377906,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2019/5130/sir20195130.pdf","text":"Report","size":"3 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2019-5130"},{"id":377905,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2019/5130/coverthb.jpg"}],"country":"United States","state":"Oregon","otherGeospatial":"Sprague River Basin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -123.04687499999999,\n              42.00032514831621\n            ],\n            [\n              -118.69628906249999,\n              42.00032514831621\n            ],\n            [\n              -118.69628906249999,\n              44.008620115415354\n            ],\n            [\n              -123.04687499999999,\n              44.008620115415354\n            ],\n            [\n              -123.04687499999999,\n              42.00032514831621\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"mailto:dc_or@usgs.gov\" data-mce-href=\"mailto:dc_or@usgs.gov\">Director</a>, <a href=\"https://www.usgs.gov/centers/or-water\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/centers/or-water\">Oregon Water Science Center</a><br>U.S. Geological Survey<br>2130 SW 5th Avenue<br>Portland, Oregon 97201</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Use Of Boosted Regression Trees To Model Streamflow</li><li>Data Used To Develop Sprague River Discharge Boosted Regression Trees Model</li><li>Building And Evaluating The Sprague River Discharge Boosted Regression Trees Model</li><li>Using The Boosted Regression Trees Model To Quantify Cumulative Instream</li><li>Flow Resulting From Curtailment Of Irrigation</li><li>Conclusion</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"publishedDate":"2020-08-28","noUsgsAuthors":false,"publicationDate":"2020-08-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Wood, Tamara M. 0000-0001-6057-8080 tmwood@usgs.gov","orcid":"https://orcid.org/0000-0001-6057-8080","contributorId":1164,"corporation":false,"usgs":true,"family":"Wood","given":"Tamara","email":"tmwood@usgs.gov","middleInitial":"M.","affiliations":[{"id":518,"text":"Oregon Water Science Center","active":true,"usgs":true}],"preferred":true,"id":774399,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70212844,"text":"70212844 - 2020 - Coming of age: Morphometric variation in the hand skeletons of juvenile and adult Lesser Treeshrews (Scandentia: Tupaiidae: Tupaia minor Günther, 1876)","interactions":[],"lastModifiedDate":"2020-09-10T20:48:59.393615","indexId":"70212844","displayToPublicDate":"2020-08-28T09:06:22","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2373,"text":"Journal of Mammalogy","onlineIssn":"1545-1542","printIssn":"0022-2372","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Coming of age: Morphometric variation in the hand skeletons of juvenile and adult Lesser Treeshrews (Scandentia: Tupaiidae: <i>Tupaia minor</i> Günther, 1876)","title":"Coming of age: Morphometric variation in the hand skeletons of juvenile and adult Lesser Treeshrews (Scandentia: Tupaiidae: Tupaia minor Günther, 1876)","docAbstract":"Morphometric analyses of the manus skeleton have proven useful in understanding species limits and morphological divergence among tupaiid treeshrews (Scandentia: Tupaiidae).  Specimens in these studies are typically limited to mature individuals with fully erupted permanent dentition, which eliminates potentially confounding variation attributable to age, but can also exclude rare taxa and small island populations that are poorly represented in systematic collections.  To determine the real limits associated with including immature animals in such studies, we used multivariate analyses to study sexual and age variation of the manus skeleton within two allopatric populations of the Lesser Treeshrew (Tupaia minor Günther, 1876) from the Malay Peninsula and from Borneo that we treated as separate samples. Individuals were aged using dental eruption of the permanent dentition. We also recorded the degree of epiphyseal fusion of the bones of the manus based on x-rays of study skins.  We then tested our ability to distinguish the two populations using a series of discriminant function analyses of hand measurements from samples that included varying proportions of immature individuals and adults.  We found no evidence of sexual dimorphism in hand proportions, permitting us to combine females and males in our samples.  Epiphyseal fusion of the metacarpals and phalanges typically occurs by the time the third molars have completely erupted, and fusion of the distal epiphyses of the radius and ulna typically occurs by the time the permanent fourth premolars are in place.  There is occasional asynchrony between dental age and epiphyseal fusion.  In both populations, the hands of most infants and subadults provide morphometric values within the range of variation of adults, although they are typically distributed in the lower part of the adult range and have the potential to bias the sample toward lower mean size.  The inclusion of infants and subadults when attempting to discriminate between two taxa generally results in lower rates of correct classifications, although the rates increase as the sample of immature individuals is limited to older subadults.  As a general rule, we recommend that infants and subadults continue to be excluded from analyses when exploring taxonomic boundaries among treeshrews.  In cases of extremely small sample sizes of adults, however, older subadults—in which the permanent third premolars are erupting or in place—can be used with appropriate caution.","language":"English","publisher":"Oxford University Press","doi":"10.1093/jmammal/gyaa056","usgsCitation":"Woodman, N., Miller-Murthy, A., Olson, L.E., and Sargis, E.J., 2020, Coming of age: Morphometric variation in the hand skeletons of juvenile and adult Lesser Treeshrews (Scandentia: Tupaiidae: Tupaia minor Günther, 1876): Journal of Mammalogy, v. 101, no. 4, p. 1151-1164, https://doi.org/10.1093/jmammal/gyaa056.","productDescription":"14 p.","startPage":"1151","endPage":"1164","ipdsId":"IP-118103","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":455495,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/jmammal/gyaa056","text":"Publisher Index Page"},{"id":378020,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"101","issue":"4","noUsgsAuthors":false,"publicationDate":"2020-08-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Woodman, Neal 0000-0003-2689-7373 nwoodman@usgs.gov","orcid":"https://orcid.org/0000-0003-2689-7373","contributorId":3547,"corporation":false,"usgs":true,"family":"Woodman","given":"Neal","email":"nwoodman@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":797662,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Miller-Murthy, Ananth","contributorId":239693,"corporation":false,"usgs":false,"family":"Miller-Murthy","given":"Ananth","email":"","affiliations":[{"id":37550,"text":"Yale University","active":true,"usgs":false}],"preferred":false,"id":797663,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Olson, Link E. 0000-0002-2481-5701","orcid":"https://orcid.org/0000-0002-2481-5701","contributorId":203887,"corporation":false,"usgs":false,"family":"Olson","given":"Link","email":"","middleInitial":"E.","affiliations":[{"id":36743,"text":"University of Alaska Museum, University of Alaska Fairbanks, Fairbanks, AK 99775, USA","active":true,"usgs":false}],"preferred":false,"id":797664,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sargis, Eric J. 0000-0003-0424-3803","orcid":"https://orcid.org/0000-0003-0424-3803","contributorId":203885,"corporation":false,"usgs":false,"family":"Sargis","given":"Eric","email":"","middleInitial":"J.","affiliations":[{"id":36741,"text":"Department of Anthropology, Yale University, P.O. Box 208277, New Haven, CT 06520, USA","active":true,"usgs":false}],"preferred":false,"id":797665,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70224303,"text":"70224303 - 2020 - Using paleo-archives to safeguard biodiversity under climate change","interactions":[],"lastModifiedDate":"2021-09-21T12:59:13.048095","indexId":"70224303","displayToPublicDate":"2020-08-28T07:57:13","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3338,"text":"Science","active":true,"publicationSubtype":{"id":10}},"title":"Using paleo-archives to safeguard biodiversity under climate change","docAbstract":"<div id=\"abstracts\"><div class=\"core-container\"><div>Strategies for 21st-century environmental management and conservation under global change require a strong understanding of the biological mechanisms that mediate responses to climate- and human-driven change to successfully mitigate range contractions, extinctions, and the degradation of ecosystem services. Biodiversity responses to past rapid warming events can be followed in situ and over extended periods, using cross-disciplinary approaches that provide cost-effective and scalable information for species’ conservation and the maintenance of resilient ecosystems in many bioregions. Beyond the intrinsic knowledge gain such integrative research will increasingly provide the context, tools, and relevant case studies to assist in mitigating climate-driven biodiversity losses in the 21st century and beyond.</div></div></div>","language":"English","publisher":"Science","doi":"10.1126/science.abc5654","usgsCitation":"Fordham, D.A., Jackson, S., Brown, S.C., Huntley, B., Brook, B.W., Dahl-Jensen, D., Gilbert, M.T., Otto-Bliesner, B.L., Svensson, A., Theodoridis, S., Wilmshurst, J.M., Buettel, J.C., Canteri, E., McDowell, M., Orlando, L., Pilowsky, J., Rahbek, C., and Nogues-Bravo, D., 2020, Using paleo-archives to safeguard biodiversity under climate change: Science, v. 369, no. 6507, 11 p., https://doi.org/10.1126/science.abc5654.","productDescription":"11 p.","ipdsId":"IP-119046","costCenters":[{"id":41166,"text":"Southwest Climate Adaptation Science Center","active":true,"usgs":true}],"links":[{"id":455498,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://researchprofiles.ku.dk/da/publications/98db5a5f-8b1d-44fd-a9d3-12d682c5e5d0","text":"External Repository"},{"id":389541,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"369","issue":"6507","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Fordham, Damien A.","contributorId":209655,"corporation":false,"usgs":false,"family":"Fordham","given":"Damien","email":"","middleInitial":"A.","affiliations":[{"id":37953,"text":"The University of Adelaide","active":true,"usgs":false}],"preferred":false,"id":823622,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jackson, Stephen 0000-0002-1487-4652","orcid":"https://orcid.org/0000-0002-1487-4652","contributorId":219995,"corporation":false,"usgs":true,"family":"Jackson","given":"Stephen","affiliations":[{"id":569,"text":"Southwest Climate Science Center","active":true,"usgs":true}],"preferred":true,"id":823623,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Brown, Stuart C.","contributorId":265866,"corporation":false,"usgs":false,"family":"Brown","given":"Stuart","email":"","middleInitial":"C.","affiliations":[{"id":36897,"text":"University of Adelaide","active":true,"usgs":false}],"preferred":false,"id":823624,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Huntley, Brian","contributorId":209671,"corporation":false,"usgs":false,"family":"Huntley","given":"Brian","email":"","affiliations":[{"id":37954,"text":"University of Durham","active":true,"usgs":false}],"preferred":false,"id":823625,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Brook, Barry W.","contributorId":265867,"corporation":false,"usgs":false,"family":"Brook","given":"Barry","email":"","middleInitial":"W.","affiliations":[{"id":16141,"text":"University of Tasmania","active":true,"usgs":false}],"preferred":false,"id":823626,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Dahl-Jensen, Dorthe","contributorId":198811,"corporation":false,"usgs":false,"family":"Dahl-Jensen","given":"Dorthe","email":"","affiliations":[],"preferred":false,"id":823627,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Gilbert, M. Thomas P.","contributorId":145677,"corporation":false,"usgs":false,"family":"Gilbert","given":"M.","email":"","middleInitial":"Thomas P.","affiliations":[{"id":16185,"text":"Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":823628,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Otto-Bliesner, Bette L.","contributorId":209685,"corporation":false,"usgs":false,"family":"Otto-Bliesner","given":"Bette","email":"","middleInitial":"L.","affiliations":[{"id":6648,"text":"National Center for Atmospheric Research","active":true,"usgs":false}],"preferred":false,"id":823629,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Svensson, Anders","contributorId":265868,"corporation":false,"usgs":false,"family":"Svensson","given":"Anders","email":"","affiliations":[{"id":12672,"text":"University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":823630,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Theodoridis, Spyros","contributorId":265869,"corporation":false,"usgs":false,"family":"Theodoridis","given":"Spyros","email":"","affiliations":[{"id":12672,"text":"University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":823631,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Wilmshurst, Janet M.","contributorId":207235,"corporation":false,"usgs":false,"family":"Wilmshurst","given":"Janet","email":"","middleInitial":"M.","affiliations":[{"id":37490,"text":"University of Aukland","active":true,"usgs":false}],"preferred":false,"id":823632,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Buettel, Jessie C.","contributorId":265870,"corporation":false,"usgs":false,"family":"Buettel","given":"Jessie","email":"","middleInitial":"C.","affiliations":[{"id":16141,"text":"University of Tasmania","active":true,"usgs":false}],"preferred":false,"id":823633,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Canteri, Elisabetta","contributorId":265871,"corporation":false,"usgs":false,"family":"Canteri","given":"Elisabetta","email":"","affiliations":[{"id":54811,"text":"University of Adelaide; University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":823634,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"McDowell, Matthew","contributorId":265872,"corporation":false,"usgs":false,"family":"McDowell","given":"Matthew","email":"","affiliations":[{"id":16141,"text":"University of Tasmania","active":true,"usgs":false}],"preferred":false,"id":823635,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Orlando, Ludovic","contributorId":265873,"corporation":false,"usgs":false,"family":"Orlando","given":"Ludovic","email":"","affiliations":[{"id":54812,"text":"University of Copenhagen, Université de Toulouse","active":true,"usgs":false}],"preferred":false,"id":823636,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Pilowsky, Julia","contributorId":265874,"corporation":false,"usgs":false,"family":"Pilowsky","given":"Julia","email":"","affiliations":[{"id":54811,"text":"University of Adelaide; University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":823637,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Rahbek, Carsten","contributorId":265875,"corporation":false,"usgs":false,"family":"Rahbek","given":"Carsten","email":"","affiliations":[{"id":54813,"text":"University of Copenhagen, Imperial College London","active":true,"usgs":false}],"preferred":false,"id":823638,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Nogues-Bravo, David","contributorId":265876,"corporation":false,"usgs":false,"family":"Nogues-Bravo","given":"David","affiliations":[{"id":12672,"text":"University of Copenhagen","active":true,"usgs":false}],"preferred":false,"id":823639,"contributorType":{"id":1,"text":"Authors"},"rank":18}]}}
,{"id":70220558,"text":"70220558 - 2020 - Calibrating environmental DNA metabarcoding to conventional surveys for measuring fish species richness","interactions":[],"lastModifiedDate":"2021-05-20T12:12:02.045569","indexId":"70220558","displayToPublicDate":"2020-08-28T07:53:02","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3910,"text":"Frontiers in Ecology and Evolution","onlineIssn":"2296-701X","active":true,"publicationSubtype":{"id":10}},"title":"Calibrating environmental DNA metabarcoding to conventional surveys for measuring fish species richness","docAbstract":"<p><span>The ability to properly identify species present in a landscape is foundational to ecology and essential for natural resource management and conservation. However, many species are often unaccounted for due to ineffective direct capture and visual surveys, especially in aquatic environments. Environmental DNA metabarcoding is an approach that overcomes low detection probabilities and should consequently enhance estimates of biodiversity and its proxy, species richness. Here, we synthesize 37 studies in natural aquatic systems to compare species richness estimates for bony fish between eDNA metabarcoding and conventional methods, such as nets, visual census, and electrofishing. In freshwater systems with fewer than 100 species, we found eDNA metabarcoding detected more species than conventional methods. Using multiple genetic markers further increased species richness estimates with eDNA metabarcoding. For more diverse freshwater systems and across marine systems, eDNA metabarcoding reported similar values of species richness to conventional methods; however, more studies are needed in these environments to better evaluate relative performance. In systems with greater biodiversity, eDNA metabarcoding will require more populated reference databases, increased sampling effort, and multi-marker assays to ensure robust species richness estimates to further validate the approach. eDNA metabarcoding is reliable and provides a path for broader biodiversity assessments that can outperform conventional methods for estimating species richness.</span></p>","language":"English","publisher":"Frontiers","doi":"10.3389/fevo.2020.00276","usgsCitation":"McElroy, M.E., Dressler, T.L., Titcomb, G.C., Wilson, E.A., Deiner, K., Dudley, T.L., Eliason, E.J., Evans, N.T., Gaines, S., Lafferty, K.D., Lamberti, G.A., Li, Y., Lodge, D.M., Love, M.S., Mahon, A.R., Pfrender, M.E., Renshaw, M.A., Selkoe, K., and Jerde, C.L., 2020, Calibrating environmental DNA metabarcoding to conventional surveys for measuring fish species richness: Frontiers in Ecology and Evolution, v. 8, 276, 12 p., https://doi.org/10.3389/fevo.2020.00276.","productDescription":"276, 12 p.","onlineOnly":"N","ipdsId":"IP-118871","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":455500,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3389/fevo.2020.00276","text":"Publisher Index Page"},{"id":385758,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"8","noUsgsAuthors":false,"publicationDate":"2020-08-28","publicationStatus":"PW","contributors":{"authors":[{"text":"McElroy, Mary E","contributorId":258218,"corporation":false,"usgs":false,"family":"McElroy","given":"Mary","email":"","middleInitial":"E","affiliations":[{"id":52245,"text":"Interdepartmental Graduate Program in Marine Science, University of California, Santa Barbara, Santa Barbara, CA, United States","active":true,"usgs":false}],"preferred":false,"id":815994,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dressler, Terra L","contributorId":240830,"corporation":false,"usgs":false,"family":"Dressler","given":"Terra","email":"","middleInitial":"L","affiliations":[{"id":48145,"text":"Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA, USA","active":true,"usgs":false}],"preferred":false,"id":815995,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Titcomb, Georgia C","contributorId":258219,"corporation":false,"usgs":false,"family":"Titcomb","given":"Georgia","email":"","middleInitial":"C","affiliations":[{"id":52246,"text":"Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, Santa Barbara, CA, United States","active":true,"usgs":false}],"preferred":false,"id":815996,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Wilson, Emily A","contributorId":258220,"corporation":false,"usgs":false,"family":"Wilson","given":"Emily","email":"","middleInitial":"A","affiliations":[{"id":52247,"text":"Biology Department, Bakersfield College, Bakersfield, CA, United States","active":true,"usgs":false}],"preferred":false,"id":815997,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Deiner, Kristy","contributorId":176866,"corporation":false,"usgs":false,"family":"Deiner","given":"Kristy","email":"","affiliations":[],"preferred":false,"id":815998,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Dudley, Tom L.","contributorId":177792,"corporation":false,"usgs":false,"family":"Dudley","given":"Tom","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":815999,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Eliason, Erika J.","contributorId":176524,"corporation":false,"usgs":false,"family":"Eliason","given":"Erika","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":816000,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Evans, Nathan T","contributorId":258221,"corporation":false,"usgs":false,"family":"Evans","given":"Nathan","email":"","middleInitial":"T","affiliations":[{"id":52248,"text":"U.S. Fish and Wildlife Service, Carterville Fish and Wildlife Conservation Office, Wilmington, IL, United States","active":true,"usgs":false}],"preferred":false,"id":816001,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Gaines, Steven D","contributorId":258222,"corporation":false,"usgs":false,"family":"Gaines","given":"Steven D","affiliations":[{"id":52249,"text":"Bren School of Environmental Science and Management, University of California, Santa Barbara, Santa Barbara, CA, United States","active":true,"usgs":false}],"preferred":false,"id":816002,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Lafferty, Kevin D. 0000-0001-7583-4593 klafferty@usgs.gov","orcid":"https://orcid.org/0000-0001-7583-4593","contributorId":1415,"corporation":false,"usgs":true,"family":"Lafferty","given":"Kevin","email":"klafferty@usgs.gov","middleInitial":"D.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":816003,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Lamberti, Gary A","contributorId":258223,"corporation":false,"usgs":false,"family":"Lamberti","given":"Gary","email":"","middleInitial":"A","affiliations":[{"id":52250,"text":"Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, United States","active":true,"usgs":false}],"preferred":false,"id":816004,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Li, Yiyuan","contributorId":258224,"corporation":false,"usgs":false,"family":"Li","given":"Yiyuan","email":"","affiliations":[{"id":52251,"text":"Department of Integrative Biology, The University of Texas at Austin, Austin, TX, United States","active":true,"usgs":false}],"preferred":false,"id":816005,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Lodge, David M.","contributorId":76622,"corporation":false,"usgs":false,"family":"Lodge","given":"David","email":"","middleInitial":"M.","affiliations":[{"id":16905,"text":"University of Notre Dame, Dept. of Biological Sciences, Notre Dame, IN, 46556, USA","active":true,"usgs":false}],"preferred":false,"id":816006,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Love, Milton S.","contributorId":178505,"corporation":false,"usgs":false,"family":"Love","given":"Milton","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":816007,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Mahon, Andrew R.","contributorId":210300,"corporation":false,"usgs":false,"family":"Mahon","given":"Andrew","email":"","middleInitial":"R.","affiliations":[{"id":13588,"text":"Central Michigan University","active":true,"usgs":false}],"preferred":false,"id":816008,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Pfrender, Michael E","contributorId":258225,"corporation":false,"usgs":false,"family":"Pfrender","given":"Michael","email":"","middleInitial":"E","affiliations":[{"id":52250,"text":"Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, United States","active":true,"usgs":false}],"preferred":false,"id":816009,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Renshaw, Mark A","contributorId":256929,"corporation":false,"usgs":false,"family":"Renshaw","given":"Mark","email":"","middleInitial":"A","affiliations":[{"id":51903,"text":"Oceanic Institute of Hawai'i Pacific University, Waimanalo, Hawai'i, USA","active":true,"usgs":false}],"preferred":false,"id":816010,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Selkoe, Kimberly A","contributorId":258226,"corporation":false,"usgs":false,"family":"Selkoe","given":"Kimberly A","affiliations":[{"id":52254,"text":"National Center for Ecological Analysis and Synthesis, University of California, Santa Barbara, Santa Barbara, CA, United States","active":true,"usgs":false}],"preferred":false,"id":816011,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Jerde, Christopher L. 0000-0002-8074-3466","orcid":"https://orcid.org/0000-0002-8074-3466","contributorId":210301,"corporation":false,"usgs":false,"family":"Jerde","given":"Christopher","email":"","middleInitial":"L.","affiliations":[{"id":16936,"text":"University of California Santa Barbara","active":true,"usgs":false}],"preferred":false,"id":816012,"contributorType":{"id":1,"text":"Authors"},"rank":19}]}}
,{"id":70213196,"text":"70213196 - 2020 - Compositional layering in Io driven by magmatic segregation and volcanism","interactions":[],"lastModifiedDate":"2020-09-16T13:19:30.522123","indexId":"70213196","displayToPublicDate":"2020-08-28T07:22:22","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2312,"text":"Journal of Geophysical Research","active":true,"publicationSubtype":{"id":10}},"title":"Compositional layering in Io driven by magmatic segregation and volcanism","docAbstract":"The compositional evolution of volcanic bodies like Io is not well understood. Magmatic segregation and volcanic eruptions transport tidal heat from Io's interior to its surface. Several observed eruptions appear to be extremely high temperature (≥ 1600 K), suggesting either very high degrees of melting, refractory source regions, or intensive viscous heating on ascent. To address this ambiguity, we develop a model that couples crust and mantle dynamics to a simple compositional system. We analyse the model to investigate chemical structure and evolution. We demonstrate that magmatic segregation and volcanic eruptions lead to stratification of the mantle, the extent of which depends on how easily high temperature melts from the more refractory lower mantle can migrate upwards. We propose that Io's highest temperature eruptions originate from this lower mantle region, and that such eruptions act to limit the degree of compositional stratification.","language":"English","publisher":"American Geophysical Union","doi":"10.1029/2020JE006604","usgsCitation":"Spencer, D.C., Katz, R.F., Hewitt, I.J., May, D.A., and Keszthelyi, L.P., 2020, Compositional layering in Io driven by magmatic segregation and volcanism: Journal of Geophysical Research, v. 125, no. 9, e2020JE006604, 23 p., https://doi.org/10.1029/2020JE006604.","productDescription":"e2020JE006604, 23 p.","ipdsId":"IP-120159","costCenters":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"links":[{"id":455502,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2020je006604","text":"Publisher Index Page"},{"id":378388,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"otherGeospatial":"Io","volume":"125","issue":"9","noUsgsAuthors":false,"publicationDate":"2020-09-14","publicationStatus":"PW","contributors":{"authors":[{"text":"Spencer, Dan C","contributorId":240645,"corporation":false,"usgs":false,"family":"Spencer","given":"Dan","email":"","middleInitial":"C","affiliations":[{"id":25447,"text":"University of Oxford","active":true,"usgs":false}],"preferred":false,"id":798597,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Katz, Richard F. 0000-0001-8746-5430","orcid":"https://orcid.org/0000-0001-8746-5430","contributorId":240668,"corporation":false,"usgs":false,"family":"Katz","given":"Richard","email":"","middleInitial":"F.","affiliations":[{"id":20302,"text":"Univeristy of Oxford","active":true,"usgs":false}],"preferred":false,"id":798680,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hewitt, Ian J. 0000-0002-9167-6481","orcid":"https://orcid.org/0000-0002-9167-6481","contributorId":240669,"corporation":false,"usgs":false,"family":"Hewitt","given":"Ian","email":"","middleInitial":"J.","affiliations":[{"id":25447,"text":"University of Oxford","active":true,"usgs":false}],"preferred":false,"id":798681,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"May, David A.","contributorId":240670,"corporation":false,"usgs":false,"family":"May","given":"David","email":"","middleInitial":"A.","affiliations":[{"id":20302,"text":"Univeristy of Oxford","active":true,"usgs":false}],"preferred":false,"id":798682,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Keszthelyi, Laszlo P. 0000-0003-1879-4331 laz@usgs.gov","orcid":"https://orcid.org/0000-0003-1879-4331","contributorId":227,"corporation":false,"usgs":true,"family":"Keszthelyi","given":"Laszlo","email":"laz@usgs.gov","middleInitial":"P.","affiliations":[{"id":131,"text":"Astrogeology Science Center","active":true,"usgs":true}],"preferred":true,"id":798598,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70212864,"text":"70212864 - 2020 - Use of environmental DNA to detect grass carp spawning events","interactions":[],"lastModifiedDate":"2020-09-02T01:16:00.196845","indexId":"70212864","displayToPublicDate":"2020-08-27T20:12:53","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":6476,"text":"Fishes","active":true,"publicationSubtype":{"id":10}},"title":"Use of environmental DNA to detect grass carp spawning events","docAbstract":"<p><span>The timing and location of spawning events are important data for managers seeking to control invasive grass carp populations. Ichthyoplankton tows for grass carp eggs and larvae can be used to detect spawning events; however, these samples can be highly debris-laden, and are expensive and laborious to process. An alternative method, environmental DNA (eDNA) technology, has proven effective in determining the presence of aquatic species. The objectives of this project were to assess the use of eDNA collections and quantitative eDNA analysis to assess the potential spawning of grass carp in five reservoir tributaries, and to compare those results to the more traditional method of ichthyoplankton tows. Grass carp eDNA was detected in 56% of sampling occasions and was detected in all five rivers. Concentrations of grass carp eDNA were orders of magnitude higher in June, corresponding to elevated discharge and egg presence. Grass carp environmental DNA flux (copies/h) was lower when no eggs were present and was higher when velocities and discharge increased and eggs were present. There was a positive relationship between grass carp eDNA flux and egg flux. Our results support the further development of eDNA analysis as a method to detect the spawning events of grass carp or other rheophilic spawners.&nbsp;</span></p>","language":"English","publisher":"MDPI","doi":"10.3390/fishes5030027","usgsCitation":"Hayer, C., Bayless, M.F., George, A.E., Thompson, N., Richter, C.A., and Chapman, D., 2020, Use of environmental DNA to detect grass carp spawning events: Fishes, v. 5, no. 3, 27, 10 p., https://doi.org/10.3390/fishes5030027.","productDescription":"27, 10 p.","ipdsId":"IP-120266","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":455503,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3390/fishes5030027","text":"Publisher Index Page"},{"id":436810,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9WBOLYW","text":"USGS data release","linkHelpText":"Asian carp eDNA and egg morphology data collected from Truman Reservoir tributaries, Missouri, USA, 2014"},{"id":378085,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"5","issue":"3","noUsgsAuthors":false,"publicationDate":"2020-08-27","publicationStatus":"PW","contributors":{"authors":[{"text":"Hayer, Cari-Ann chayer@usgs.gov","contributorId":177628,"corporation":false,"usgs":false,"family":"Hayer","given":"Cari-Ann","email":"chayer@usgs.gov","affiliations":[],"preferred":false,"id":797721,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bayless, Michael F.","contributorId":239697,"corporation":false,"usgs":false,"family":"Bayless","given":"Michael","email":"","middleInitial":"F.","affiliations":[{"id":16971,"text":"Missouri Department of Conservation","active":true,"usgs":false}],"preferred":false,"id":797722,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"George, Amy E. 0000-0003-1150-8646 ageorge@usgs.gov","orcid":"https://orcid.org/0000-0003-1150-8646","contributorId":3950,"corporation":false,"usgs":true,"family":"George","given":"Amy","email":"ageorge@usgs.gov","middleInitial":"E.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":797723,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Thompson, Nathan 0000-0002-1372-6340 nthompson@usgs.gov","orcid":"https://orcid.org/0000-0002-1372-6340","contributorId":196133,"corporation":false,"usgs":true,"family":"Thompson","given":"Nathan","email":"nthompson@usgs.gov","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":797724,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Richter, Catherine A. 0000-0001-7322-4206 crichter@usgs.gov","orcid":"https://orcid.org/0000-0001-7322-4206","contributorId":138994,"corporation":false,"usgs":true,"family":"Richter","given":"Catherine","email":"crichter@usgs.gov","middleInitial":"A.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":797725,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Chapman, Duane 0000-0002-1086-8853 dchapman@usgs.gov","orcid":"https://orcid.org/0000-0002-1086-8853","contributorId":1291,"corporation":false,"usgs":true,"family":"Chapman","given":"Duane","email":"dchapman@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true},{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":797726,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70212537,"text":"sir20205067 - 2020 - Bathymetric surveys of Morse and Geist Reservoirs in central Indiana made with a multibeam echosounder, 2016, and comparison with previous surveys","interactions":[],"lastModifiedDate":"2020-08-28T12:29:29.790982","indexId":"sir20205067","displayToPublicDate":"2020-08-27T12:35:16","publicationYear":"2020","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2020-5067","displayTitle":"Bathymetric Surveys of Morse and Geist Reservoirs in Central Indiana made with a Multibeam Echosounder, 2016, and Comparison with Previous Surveys","title":"Bathymetric surveys of Morse and Geist Reservoirs in central Indiana made with a multibeam echosounder, 2016, and comparison with previous surveys","docAbstract":"<p>The U.S. Geological Survey, in cooperation with Citizens Energy Group, conducted a bathymetric survey of Morse and Geist Reservoirs in central Indiana in April and May of 2016 with a multibeam echosounder. Both reservoirs serve as water supply, flood control, and recreational resources for the city of Indianapolis and the surrounding communities.</p><p>Morse and Geist Reservoirs were surveyed to create updated bathymetric maps, determine storage capacities (volume) at specified water-surface elevations, and compare current conditions to historical surveys. Bathymetric data were collected using a high-resolution multibeam echosounder, and supplemental data were collected in coves and other shallow areas using an acoustic Doppler current profiler. The data were processed and combined using HYPACK and ArcMap software to develop a triangulated irregular network, a 5-foot gridded bathymetric dataset, a reservoir capacity table, and a bathymetric contour map for each reservoir.</p><p>The computed volume of Morse Reservoir was 23,136 acre-feet (7.54 billion gallons) with a surface area of 1,439 acres (62.7 million square feet). The computed volume of Geist Reservoir was 21,146 acre-feet (6.89 billion gallons) with a surface area of 1,853 acres (80.7 million square feet).</p><p>Between 1996 and 2016, lake bottom elevations have increased by a mean of 0.32 feet in Morse Reservoir and 0.27 feet in Geist Reservoir. The data indicate higher sedimentation rates in the upper parts of each reservoir as compared to near the dam and higher sedimentation rates in Morse Reservoir (0.5 inch per year) than in Geist Reservoir (0.2 inch per year). The differences between the current and historical surveys may be due to sedimentation, differences in accuracy between previous surveys, or a combination of both.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20205067","collaboration":"Prepared in cooperation with Citizens Energy Group","usgsCitation":"Boldt, J.A., and Martin, Z.W., 2020, Bathymetric surveys of Morse and Geist Reservoirs in central Indiana made with a multibeam echosounder, 2016, and comparison with previous surveys: U.S. Geological Survey Scientific Investigations Report 2020–5067, 39 p., https://doi.org/10.3133/sir20205067.","productDescription":"Report: viii, 39 p.; Data Release; Additional Reports","numberOfPages":"50","onlineOnly":"Y","ipdsId":"IP-116783","costCenters":[{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true}],"links":[{"id":377662,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2020/5067/sir20205067.pdf","text":"Report","size":"31.9 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020–5067"},{"id":377911,"rank":4,"type":{"id":2,"text":"Additional Report Piece"},"url":"https://pubs.usgs.gov/sir/2020/5067/sir20205067_Morse_Reservoir_2016.pdf","text":"Bathymetric Map of Morse Reservoir near Noblesville, Indiana, 2016","size":"28.5 MB","linkFileType":{"id":1,"text":"pdf"},"linkHelpText":"— High resolution file"},{"id":377912,"rank":5,"type":{"id":2,"text":"Additional Report Piece"},"url":"https://pubs.usgs.gov/sir/2020/5067/sir20205067_Geist_Reservoir_2016.pdf","text":"Bathymetric Map of Geist Reservoir near Fishers, Indiana, 2016","size":"23.4 MB","linkFileType":{"id":1,"text":"pdf"},"linkHelpText":"— High resolution file"},{"id":377663,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9A2ITC6","text":"USGS data release","description":"USGS Data Release","linkHelpText":"Bathymetry of Morse and Geist Reservoirs in central Indiana, 2016"},{"id":377661,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2020/5067/coverthb.jpg"}],"country":"United States","state":"Indiana","county":"Hamilton County, Marion County","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[-85.8617,40.2201],[-85.863,40.139],[-85.8624,39.9436],[-85.8625,39.9286],[-85.9369,39.9272],[-85.9379,39.87],[-85.9541,39.8696],[-85.9518,39.6969],[-85.9523,39.638],[-86.248,39.6335],[-86.3268,39.6318],[-86.3281,39.8526],[-86.328,39.8662],[-86.325,39.8662],[-86.3267,39.9238],[-86.2967,39.9246],[-86.2757,39.925],[-86.2385,39.9259],[-86.239,39.9549],[-86.2417,40.0419],[-86.242,40.1304],[-86.2424,40.1807],[-86.2435,40.2152],[-86.1285,40.2176],[-86.0135,40.2186],[-85.9015,40.2194],[-85.8617,40.2201]]]},\"properties\":{\"name\":\"Hamilton\",\"state\":\"IN\"}}]}","contact":"<p>Director, <a data-mce-href=\"https://www.usgs.gov/centers/oki-water\" href=\"https://www.usgs.gov/centers/oki-water\">Ohio-Kentucky-Indiana Water Science Center</a><br>U.S. Geological Survey<br>5957 Lakeside Boulevard<br>Indianapolis, IN 46278<br></p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Methods and Data Collection</li><li>Bathymetric Survey Results for Morse and Geist Reservoirs</li><li>Comparison with Previous Surveys</li><li>Discussion of Comparison Methods</li><li>Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":15,"text":"Madison PSC"},"publishedDate":"2020-08-27","noUsgsAuthors":false,"publicationDate":"2020-08-27","publicationStatus":"PW","contributors":{"authors":[{"text":"Boldt, Justin A. 0000-0002-0771-3658 jboldt@usgs.gov","orcid":"https://orcid.org/0000-0002-0771-3658","contributorId":172971,"corporation":false,"usgs":true,"family":"Boldt","given":"Justin","email":"jboldt@usgs.gov","middleInitial":"A.","affiliations":[{"id":27231,"text":"Indiana-Kentucky Water Science Center","active":true,"usgs":true},{"id":344,"text":"Illinois Water Science Center","active":true,"usgs":true},{"id":502,"text":"Office of Surface Water","active":true,"usgs":true}],"preferred":false,"id":796742,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Martin, Zachary W. 0000-0001-5779-3548 zmartin@usgs.gov","orcid":"https://orcid.org/0000-0001-5779-3548","contributorId":156296,"corporation":false,"usgs":true,"family":"Martin","given":"Zachary","email":"zmartin@usgs.gov","middleInitial":"W.","affiliations":[{"id":346,"text":"Indiana Water Science Center","active":true,"usgs":true}],"preferred":false,"id":796743,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70213047,"text":"70213047 - 2020 - Changes in prey, turbidity, and competition reduce somatic growth and cause the collapse of a fish population","interactions":[],"lastModifiedDate":"2021-02-03T23:26:08.186306","indexId":"70213047","displayToPublicDate":"2020-08-27T11:31:38","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1459,"text":"Ecological Monographs","active":true,"publicationSubtype":{"id":10}},"title":"Changes in prey, turbidity, and competition reduce somatic growth and cause the collapse of a fish population","docAbstract":"<p><span>Somatic growth exerts strong control on patterns in the abundance of animal populations via effects on maturation, fecundity, and survival rates of juveniles and adults. In this paper, we quantify abiotic and biotic drivers of rainbow trout growth in the Colorado River, AZ, and the resulting impact on spatial and temporal variation in abundance. Inferences are based on approximately 10,000 observations of individual growth grates obtained through an intensive mark‐recapture effort conducted over five years (2012‐2016) in a 130 km‐long study segment downstream of Glen Canyon Dam. Prey availability, turbidity‐driven feeding efficiency, and intra‐specific competition were the dominant drivers of rainbow trout growth. Discharge, water temperature, and solar insulation were also evaluated but had a smaller influence. Mixed‐effect models explained 79‐82% of the variability in observed growth rates, with fixed covariate effects explaining 79‐87% of the total variation in growth parameters across five reaches and 18 quarterly sampling intervals. Reductions in growth owing in part to a phosphorous‐driven decline in prey availability, led to substantive weight loss and poor fish condition. This in turn lowered survival rates and delayed maturation, which led to a rapid decline in abundance and later recruitments. Reductions in feeding efficiency, due to episodic inputs of fine sediment from tributaries, and warmer water temperatures, contributed to reduced growth in downstream reaches, which led to more severe declines in abundance. Somatic growth rates increased following the population collapse due to reduced competition, and in the absence of substantive increases in prey availability. Our study elucidates important linkages between abiotic and biotic factors, somatic growth, and vital rates, and demonstrates how variation in somatic growth influences temporal and spatial patterns in abundance.</span></p>","language":"English","publisher":"Ecological Society of America","doi":"10.1002/ecm.1427","usgsCitation":"Korman, J., Yard, M.D., Dzul, M.C., Yackulic, C., Dodrill, M., Deemer, B., and Kennedy, T., 2020, Changes in prey, turbidity, and competition reduce somatic growth and cause the collapse of a fish population: Ecological Monographs, v. 91, no. 1, e01427, https://doi.org/10.1002/ecm.1427.","productDescription":"e01427","ipdsId":"IP-116364","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":436811,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P90ODKZ3","text":"USGS data release","linkHelpText":"Rainbow trout growth data and growth covariate data downstream of Glen Canyon Dam in the Colorado River, Arizona, 2012 - 2016"},{"id":378203,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arizona","otherGeospatial":"Colorado River, Glen Canyon Dam","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -111.6925048828125,\n              36.76309161490538\n            ],\n            [\n              -111.3519287109375,\n              36.76309161490538\n            ],\n            [\n              -111.3519287109375,\n              37.00035919622158\n            ],\n            [\n              -111.6925048828125,\n              37.00035919622158\n            ],\n            [\n              -111.6925048828125,\n              36.76309161490538\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"91","issue":"1","noUsgsAuthors":false,"publicationDate":"2020-10-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Korman, Josh","contributorId":139960,"corporation":false,"usgs":false,"family":"Korman","given":"Josh","email":"","affiliations":[{"id":13333,"text":"Ecometric Research Inc.","active":true,"usgs":false}],"preferred":false,"id":798084,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Yard, Michael D. 0000-0002-6580-6027 myard@usgs.gov","orcid":"https://orcid.org/0000-0002-6580-6027","contributorId":169281,"corporation":false,"usgs":true,"family":"Yard","given":"Michael","email":"myard@usgs.gov","middleInitial":"D.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":798068,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Dzul, Maria C. 0000-0002-4798-5930 mdzul@usgs.gov","orcid":"https://orcid.org/0000-0002-4798-5930","contributorId":5469,"corporation":false,"usgs":true,"family":"Dzul","given":"Maria","email":"mdzul@usgs.gov","middleInitial":"C.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":798069,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Yackulic, Charles B. 0000-0001-9661-0724","orcid":"https://orcid.org/0000-0001-9661-0724","contributorId":218825,"corporation":false,"usgs":true,"family":"Yackulic","given":"Charles","middleInitial":"B.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":798070,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dodrill, Michael J. 0000-0002-7038-7170","orcid":"https://orcid.org/0000-0002-7038-7170","contributorId":206439,"corporation":false,"usgs":true,"family":"Dodrill","given":"Michael","middleInitial":"J.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":798071,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Deemer, Bridget R. 0000-0002-5845-1002 bdeemer@usgs.gov","orcid":"https://orcid.org/0000-0002-5845-1002","contributorId":198160,"corporation":false,"usgs":true,"family":"Deemer","given":"Bridget","email":"bdeemer@usgs.gov","middleInitial":"R.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":798072,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Kennedy, Theodore 0000-0003-3477-3629","orcid":"https://orcid.org/0000-0003-3477-3629","contributorId":221741,"corporation":false,"usgs":true,"family":"Kennedy","given":"Theodore","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":798073,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70212845,"text":"70212845 - 2020 - Spatiotemporal modeling of dengue fever risk in Puerto Rico","interactions":[],"lastModifiedDate":"2020-08-31T14:07:32.839427","indexId":"70212845","displayToPublicDate":"2020-08-27T09:06:11","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":6475,"text":"Spatial and Spatio-temporal Epidemiology","active":true,"publicationSubtype":{"id":10}},"title":"Spatiotemporal modeling of dengue fever risk in Puerto Rico","docAbstract":"<div id=\"abstracts\" class=\"Abstracts u-font-serif\"><div id=\"abs0001\" class=\"abstract author\"><div id=\"abssec0001\"><p id=\"sp0001\">Dengue Fever (DF) is a mosquito vector transmitted flavivirus and a reemerging global public health threat. Although several studies have addressed the relation between climatic and environmental factors and the epidemiology of DF, or looked at purely spatial or time series analysis, this article presents a joint spatio-temporal epidemiological analysis. Our approach accounts for both temporal and spatial autocorrelation in DF incidence and the effect of temperatures and precipitation by using a hierarchical Bayesian approach. We fitted several space-time areal models to predict relative risk at the municipality level and for each month from 1990 to 2014. Model selection was performed according to several criteria: the preferred models detected significant effects for temperature at time lags of up to four months and for precipitation up to three months. A boundary detection analysis is incorporated in the modeling approach, and it was successful in detecting municipalities with historically anomalous risk.</p></div></div></div><ul id=\"issue-navigation\" class=\"issue-navigation u-margin-s-bottom u-bg-grey1\"></ul>","language":"English","publisher":"Elsevier","doi":"10.1016/j.sste.2020.100375","usgsCitation":"Puggioni, G., Couret, J., Serman, E., Akanda, A.S., and Ginsberg, H., 2020, Spatiotemporal modeling of dengue fever risk in Puerto Rico: Spatial and Spatio-temporal Epidemiology, v. 35, 100375, https://doi.org/10.1016/j.sste.2020.100375.","productDescription":"100375","ipdsId":"IP-119403","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":488929,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://digitalcommons.uri.edu/cs_facpubs/134","text":"External Repository"},{"id":378019,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Puerto Rico","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"MultiPolygon\",\"coordinates\":[[[[-65.3277,18.295843],[-65.337451,18.308308],[-65.327318,18.323666],[-65.342068,18.34529],[-65.335701,18.349535],[-65.329334,18.341955],[-65.321754,18.338316],[-65.309833,18.337973],[-65.304409,18.332054],[-65.298328,18.330529],[-65.255933,18.342117],[-65.221568,18.320959],[-65.222853,18.310464],[-65.249857,18.296691],[-65.260282,18.290823],[-65.283269,18.280214],[-65.3277,18.295843]]],[[[-67.89174,18.11397],[-67.887099,18.112574],[-67.87643,18.114157],[-67.869804,18.118851],[-67.861548,18.122144],[-67.848245,18.10832],[-67.843202,18.094858],[-67.843615,18.085099],[-67.845293,18.081938],[-67.853098,18.078195],[-67.865598,18.06544],[-67.871462,18.0578],[-67.895921,18.052342],[-67.904431,18.05913],[-67.918778,18.063116],[-67.927841,18.068572],[-67.940799,18.079716],[-67.934479,18.111306],[-67.932185,18.113221],[-67.91088,18.119668],[-67.89174,18.11397]]],[[[-65.308717,18.145172],[-65.302295,18.141089],[-65.294896,18.14283],[-65.287962,18.148097],[-65.275165,18.13443],[-65.276214,18.131936],[-65.283248,18.132999],[-65.296036,18.12799],[-65.322794,18.126589],[-65.327184,18.124106],[-65.338506,18.112439],[-65.342037,18.11138],[-65.350493,18.111914],[-65.364733,18.120377],[-65.397837,18.110873],[-65.399791,18.108832],[-65.411767,18.106211],[-65.423765,18.097764],[-65.426311,18.093749],[-65.45138,18.086096],[-65.45681,18.087778],[-65.465849,18.087715],[-65.468768,18.092643],[-65.47979,18.096352],[-65.507265,18.091646],[-65.524209,18.081977],[-65.542087,18.081177],[-65.558646,18.08566],[-65.569305,18.091616],[-65.570628,18.097325],[-65.57686,18.103224],[-65.575579,18.115669],[-65.546199,18.119329],[-65.511712,18.13284],[-65.489829,18.135912],[-65.46791,18.143767],[-65.437058,18.15766],[-65.399517,18.161935],[-65.371373,18.157517],[-65.334289,18.147761],[-65.313476,18.144296],[-65.308717,18.145172]]],[[[-66.438813,18.485713],[-66.420921,18.488639],[-66.410344,18.489886],[-66.394287,18.489748],[-66.377286,18.488044],[-66.37282,18.487726],[-66.349647,18.486335],[-66.337728,18.48562],[-66.315477,18.474724],[-66.31503,18.47468],[-66.291225,18.472347],[-66.283675,18.472203],[-66.276599,18.478129],[-66.269799,18.480281],[-66.258015,18.476906],[-66.251547,18.472464],[-66.241797,18.46874],[-66.220148,18.466],[-66.199032,18.466163],[-66.192664,18.466212],[-66.183886,18.460506],[-66.179218,18.455305],[-66.172315,18.451462],[-66.159796,18.451706],[-66.153037,18.454457],[-66.14395,18.459761],[-66.139572,18.462317],[-66.139451,18.462387],[-66.139443,18.462315],[-66.138532,18.453305],[-66.133085,18.445881],[-66.127938,18.444632],[-66.125198,18.451209],[-66.124284,18.456324],[-66.123188,18.45943],[-66.123343,18.460363],[-66.125015,18.470435],[-66.118338,18.469581],[-66.092098,18.466535],[-66.083254,18.462022],[-66.073987,18.4581],[-66.043272,18.453655],[-66.03944,18.454441],[-66.036559,18.450216],[-66.036491,18.450117],[-66.023221,18.443875],[-66.006523,18.444347],[-65.99718,18.449895],[-65.992935,18.457489],[-65.992793,18.458102],[-65.992349,18.460024],[-65.99079,18.460419],[-65.958492,18.451354],[-65.92567,18.444881],[-65.916843,18.444619],[-65.907756,18.446893],[-65.904988,18.450926],[-65.878683,18.438322],[-65.838825,18.431865],[-65.831476,18.426849],[-65.828457,18.423543],[-65.816691,18.410663],[-65.794556,18.402845],[-65.787666,18.402544],[-65.774937,18.413951],[-65.77053,18.41294],[-65.769749,18.409473],[-65.771695,18.406277],[-65.750455,18.385208],[-65.750179,18.38505],[-65.742154,18.380459],[-65.733567,18.382211],[-65.699069,18.368156],[-65.669636,18.362102],[-65.668845,18.361939],[-65.634431,18.369835],[-65.627246,18.376436],[-65.626527,18.381728],[-65.624975,18.386553],[-65.622761,18.387771],[-65.618229,18.386496],[-65.614891,18.382473],[-65.619068,18.367755],[-65.628198,18.353711],[-65.63419,18.338965],[-65.628047,18.328252],[-65.626456,18.298982],[-65.634389,18.292349],[-65.635826,18.288271],[-65.634893,18.283923],[-65.630833,18.264989],[-65.623111,18.248012],[-65.597618,18.234289],[-65.589947,18.228225],[-65.593795,18.224059],[-65.615981,18.227389],[-65.626731,18.235484],[-65.638181,18.229121],[-65.637565,18.224444],[-65.628414,18.205149],[-65.635281,18.199975],[-65.639688,18.205656],[-65.662185,18.207018],[-65.664127,18.207136],[-65.690749,18.19499],[-65.694515,18.187011],[-65.691021,18.178998],[-65.695856,18.179324],[-65.710895,18.186963],[-65.712533,18.189146],[-65.717999,18.190176],[-65.728471,18.185588],[-65.734664,18.180368],[-65.738834,18.174066],[-65.739125,18.173453],[-65.743632,18.163957],[-65.758728,18.156601],[-65.766919,18.148424],[-65.777584,18.129239],[-65.796711,18.083746],[-65.796289,18.079835],[-65.794686,18.078607],[-65.795028,18.073561],[-65.796711,18.069842],[-65.801831,18.058527],[-65.809174,18.056818],[-65.817107,18.063378],[-65.825848,18.057482],[-65.83109,18.050664],[-65.834274,18.038988],[-65.832429,18.014916],[-65.839591,18.015077],[-65.850913,18.011954],[-65.870335,18.006597],[-65.875122,18.002826],[-65.884937,17.988521],[-65.896102,17.99026],[-65.905319,17.983974],[-65.910537,17.981855],[-65.924738,17.976087],[-65.976611,17.967669],[-65.98455,17.969411],[-65.985358,17.971854],[-65.995185,17.978989],[-66.007731,17.980541],[-66.017308,17.979583],[-66.019539,17.978354],[-66.024,17.975896],[-66.046585,17.954853],[-66.049033,17.954561],[-66.058217,17.959238],[-66.068678,17.966335],[-66.069979,17.966357],[-66.08141,17.966552],[-66.116194,17.949141],[-66.127009,17.946953],[-66.140661,17.94102],[-66.147912,17.933963],[-66.155387,17.929406],[-66.159742,17.928613],[-66.161232,17.931747],[-66.175626,17.933565],[-66.186914,17.935363],[-66.189726,17.933936],[-66.200174,17.929515],[-66.206961,17.932268],[-66.213374,17.944614],[-66.202655,17.944753],[-66.185554,17.940997],[-66.179548,17.943727],[-66.174839,17.948214],[-66.176814,17.950438],[-66.206207,17.96305],[-66.206807,17.963307],[-66.215355,17.959376],[-66.218081,17.95729],[-66.231519,17.943912],[-66.229181,17.934651],[-66.232013,17.931154],[-66.252737,17.934574],[-66.260684,17.936083],[-66.270905,17.947098],[-66.275651,17.94826],[-66.290782,17.946491],[-66.297679,17.959148],[-66.31695,17.976683],[-66.323659,17.978536],[-66.338152,17.976492],[-66.33839,17.976458],[-66.362511,17.968231],[-66.365098,17.964832],[-66.368777,17.957717],[-66.371591,17.951469],[-66.385059,17.939004],[-66.391227,17.945819],[-66.398945,17.950925],[-66.412131,17.957286],[-66.445481,17.979379],[-66.450368,17.983226],[-66.454888,17.986784],[-66.461342,17.990273],[-66.491396,17.990262],[-66.510143,17.985618],[-66.540537,17.975476],[-66.583233,17.961229],[-66.589658,17.969386],[-66.594392,17.970682],[-66.605035,17.969015],[-66.623788,17.98105],[-66.631944,17.982746],[-66.645651,17.98026],[-66.657797,17.974605],[-66.664391,17.968259],[-66.672819,17.966451],[-66.699115,17.977568],[-66.709856,17.982109],[-66.713394,17.987763],[-66.716957,17.990344],[-66.731118,17.991658],[-66.746248,17.990349],[-66.750427,17.995443],[-66.753964,17.99959],[-66.755341,18.001203],[-66.764491,18.006317],[-66.770307,18.005955],[-66.799656,17.99245],[-66.806866,17.983786],[-66.807924,17.979606],[-66.806903,17.976046],[-66.805683,17.975052],[-66.795106,17.977438],[-66.789302,17.980793],[-66.784953,17.978326],[-66.787245,17.972914],[-66.80827,17.965635],[-66.8224,17.954499],[-66.838584,17.949931],[-66.852288,17.955004],[-66.856474,17.956553],[-66.859471,17.954316],[-66.862545,17.952022],[-66.871697,17.952707],[-66.88344,17.952526],[-66.899639,17.948298],[-66.904585,17.950527],[-66.906532,17.955356],[-66.906276,17.963368],[-66.924529,17.972808],[-66.928651,17.970204],[-66.930414,17.963127],[-66.916127,17.959102],[-66.909483,17.952559],[-66.909359,17.94988],[-66.912522,17.947446],[-66.930313,17.943389],[-66.932636,17.939998],[-66.931581,17.9369],[-66.919298,17.932062],[-66.923826,17.926923],[-66.927261,17.926875],[-66.959998,17.940216],[-66.980516,17.951648],[-66.98105,17.952505],[-66.982669,17.9551],[-66.982206,17.961192],[-66.987287,17.970663],[-66.996738,17.972899],[-67.003972,17.970799],[-67.014744,17.968468],[-67.024522,17.970722],[-67.062478,17.973819],[-67.076534,17.967759],[-67.089827,17.951418],[-67.101468,17.946621],[-67.109985,17.945806],[-67.109986,17.945806],[-67.128251,17.948153],[-67.133733,17.951919],[-67.167031,17.963073],[-67.178566,17.964792],[-67.183508,17.962706],[-67.188717,17.950989],[-67.187474,17.946252],[-67.183694,17.937982],[-67.183457,17.931135],[-67.194785,17.932826],[-67.196924,17.935651],[-67.197273,17.937461],[-67.197517,17.941514],[-67.197668,17.943549],[-67.198988,17.94782],[-67.200973,17.949896],[-67.210034,17.953595],[-67.212101,17.956027],[-67.21433,17.962436],[-67.215271,17.983464],[-67.211973,17.992993],[-67.207694,17.998019],[-67.177893,18.008882],[-67.174299,18.011149],[-67.172397,18.014906],[-67.172138,18.021422],[-67.173761,18.024548],[-67.193269,18.03185],[-67.209887,18.035439],[-67.196694,18.066491],[-67.190656,18.064269],[-67.184589,18.06775],[-67.183938,18.069914],[-67.186465,18.074195],[-67.192999,18.076877],[-67.198212,18.076828],[-67.199314,18.091135],[-67.19529,18.096149],[-67.183921,18.103683],[-67.182182,18.108507],[-67.176554,18.151046],[-67.178618,18.159318],[-67.180822,18.168055],[-67.180701,18.168182],[-67.155185,18.195001],[-67.152665,18.203493],[-67.158001,18.216719],[-67.173,18.230666],[-67.175429,18.248008],[-67.187843,18.266671],[-67.187873,18.266874],[-67.189971,18.281015],[-67.196056,18.290443],[-67.209963,18.294974],[-67.225403,18.296648],[-67.226081,18.296722],[-67.235137,18.299935],[-67.267484,18.353149],[-67.27135,18.362329],[-67.268259,18.366989],[-67.260671,18.370197],[-67.23909,18.375318],[-67.226744,18.378247],[-67.216998,18.382078],[-67.202167,18.389908],[-67.160144,18.415587],[-67.159608,18.415915],[-67.156599,18.418983],[-67.155245,18.424401],[-67.156619,18.439562],[-67.161746,18.453462],[-67.169011,18.466352],[-67.169016,18.478488],[-67.164144,18.487396],[-67.14283,18.505485],[-67.138249,18.507776],[-67.125655,18.511706],[-67.103468,18.514523],[-67.093752,18.515757],[-67.07929,18.513256],[-67.020276,18.510603],[-66.988958,18.497724],[-66.95954,18.489878],[-66.957733,18.489129],[-66.957517,18.489171],[-66.944636,18.491693],[-66.906872,18.483556],[-66.90143,18.484552],[-66.867386,18.490785],[-66.849673,18.490745],[-66.83694,18.487659],[-66.836635,18.487701],[-66.79932,18.492775],[-66.780311,18.491411],[-66.764893,18.484097],[-66.749301,18.476701],[-66.742067,18.474681],[-66.733986,18.473457],[-66.710743,18.472611],[-66.683719,18.481367],[-66.679876,18.484944],[-66.664364,18.487809],[-66.645839,18.488777],[-66.624618,18.494199],[-66.586778,18.484948],[-66.584074,18.484287],[-66.565241,18.485523],[-66.562916,18.48845],[-66.563485,18.490512],[-66.558503,18.489987],[-66.53484,18.481253],[-66.533487,18.481663],[-66.529476,18.482877],[-66.511609,18.476848],[-66.470292,18.46907],[-66.456486,18.46892],[-66.449184,18.470991],[-66.441852,18.479751],[-66.439961,18.485525],[-66.438813,18.485713]]]]},\"properties\":{\"name\":\"Puerto Rico\",\"nation\":\"USA  \"}}]}","volume":"35","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Puggioni, Gavino","contributorId":239694,"corporation":false,"usgs":false,"family":"Puggioni","given":"Gavino","email":"","affiliations":[{"id":6922,"text":"University of Rhode Island","active":true,"usgs":false}],"preferred":false,"id":797666,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Couret, Jannelle","contributorId":215979,"corporation":false,"usgs":false,"family":"Couret","given":"Jannelle","email":"","affiliations":[{"id":6922,"text":"University of Rhode Island","active":true,"usgs":false}],"preferred":false,"id":797667,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Serman, Emily","contributorId":239695,"corporation":false,"usgs":false,"family":"Serman","given":"Emily","email":"","affiliations":[{"id":6922,"text":"University of Rhode Island","active":true,"usgs":false}],"preferred":false,"id":797668,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Akanda, Ali S","contributorId":223365,"corporation":false,"usgs":false,"family":"Akanda","given":"Ali","email":"","middleInitial":"S","affiliations":[{"id":6922,"text":"University of Rhode Island","active":true,"usgs":false}],"preferred":false,"id":797669,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Ginsberg, Howard S. 0000-0002-4933-2466 hginsberg@usgs.gov","orcid":"https://orcid.org/0000-0002-4933-2466","contributorId":147665,"corporation":false,"usgs":true,"family":"Ginsberg","given":"Howard S.","email":"hginsberg@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":797670,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70215621,"text":"70215621 - 2020 - Sediment record of mining legacy and water quality from a drinking-water reservoir, Aztec, New Mexico, USA","interactions":[],"lastModifiedDate":"2020-10-26T14:07:39.321219","indexId":"70215621","displayToPublicDate":"2020-08-27T09:02:34","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1534,"text":"Environmental Earth Sciences","active":true,"publicationSubtype":{"id":10}},"title":"Sediment record of mining legacy and water quality from a drinking-water reservoir, Aztec, New Mexico, USA","docAbstract":"<div id=\"Abs1-section\" class=\"c-article-section\"><div id=\"Abs1-content\" class=\"c-article-section__content\"><p>The record of mining legacy and water quality was investigated in sediments collected in 2018 from four trenches in the Aztec, New Mexico, drinking-water reservoir #1. Bulk chemical analysis of sediments with depth in the reservoir revealed variable trace-element (uranium, vanadium, arsenic, copper, sulfur, silver, lead, and zinc) concentrations, which appear to coincide with historical mining and milling operations. Cesium-137 age dating, which identified the location of the 1963 radioactive fallout maximum, combined with the known age of the bottom and top of the sediment trenches, was used to estimate a polynomial sedimentation rate (average rate = 1.7&nbsp;cm/yr). The clay size fraction (&lt; 0.004&nbsp;mm) was the dominant grain-size fraction of the sediments. Abundant fine-grained phyllosilicate (clay) minerals, predominantly montmorillonite and kaolinite, may explain sorption properties of trace elements. Scanning electron microscopy evaluation of sediments from two trenches showed copper and zinc associated with sulfur, and arsenic associated with iron and aluminum oxides. Results from laboratory batch experiments indicated that uranium, vanadium, and arsenic were released when sediments were reacted with a 150&nbsp;mg/L sodium bicarbonate solution whereas copper was released when sediments were reacted with 2&nbsp;mMol/L acetic acid. Observed concentrations from the two leach tests were below regulatory thresholds for delivery of solids to a landfill and were below drinking-water standards. Diatom relative abundance indicates that the water quality in the reservoir was not impaired by high metal concentrations.</p></div></div>","language":"English","publisher":"Springer","doi":"10.1007/s12665-020-09126-9","usgsCitation":"Blake, J.M., Brown, J., Ferguson, C.L., Bixby, R.J., and Delay, N.T., 2020, Sediment record of mining legacy and water quality from a drinking-water reservoir, Aztec, New Mexico, USA: Environmental Earth Sciences, v. 79, 404, 21 p., https://doi.org/10.1007/s12665-020-09126-9.","productDescription":"404, 21 p.","ipdsId":"IP-117206","costCenters":[{"id":472,"text":"New Mexico Water Science Center","active":true,"usgs":true}],"links":[{"id":379751,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Colorado, New Mexico","otherGeospatial":"Animas River watershed","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -108.52294921875,\n              35.66622234103479\n            ],\n            [\n              -106.182861328125,\n              35.66622234103479\n            ],\n            [\n              -106.182861328125,\n              38.41916639395372\n            ],\n            [\n              -108.52294921875,\n              38.41916639395372\n            ],\n            [\n              -108.52294921875,\n              35.66622234103479\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"79","noUsgsAuthors":false,"publicationDate":"2020-08-27","publicationStatus":"PW","contributors":{"authors":[{"text":"Blake, Johanna M. 0000-0003-4667-0096 jmtblake@usgs.gov","orcid":"https://orcid.org/0000-0003-4667-0096","contributorId":169698,"corporation":false,"usgs":true,"family":"Blake","given":"Johanna","email":"jmtblake@usgs.gov","middleInitial":"M.","affiliations":[{"id":472,"text":"New Mexico Water Science Center","active":true,"usgs":true}],"preferred":true,"id":803011,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Brown, Jeb E. 0000-0001-7671-2379","orcid":"https://orcid.org/0000-0001-7671-2379","contributorId":225088,"corporation":false,"usgs":true,"family":"Brown","given":"Jeb E.","affiliations":[{"id":472,"text":"New Mexico Water Science Center","active":true,"usgs":true}],"preferred":true,"id":803012,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Ferguson, Christina L. 0000-0003-3368-0770","orcid":"https://orcid.org/0000-0003-3368-0770","contributorId":225087,"corporation":false,"usgs":true,"family":"Ferguson","given":"Christina","email":"","middleInitial":"L.","affiliations":[{"id":472,"text":"New Mexico Water Science Center","active":true,"usgs":true}],"preferred":true,"id":803013,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Bixby, Rebecca J.","contributorId":147389,"corporation":false,"usgs":false,"family":"Bixby","given":"Rebecca","email":"","middleInitial":"J.","affiliations":[{"id":16834,"text":"Dept. of Biology and Museum of Southwestern Biology, Univ of NM","active":true,"usgs":false}],"preferred":false,"id":803014,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Delay, Naomi T.","contributorId":244007,"corporation":false,"usgs":false,"family":"Delay","given":"Naomi","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":803015,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70215573,"text":"70215573 - 2020 - Evidence of prevalent heat stress in Yukon River Chinook salmon","interactions":[],"lastModifiedDate":"2020-12-14T16:44:16.341563","indexId":"70215573","displayToPublicDate":"2020-08-27T08:04:57","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":6455,"text":"Canadian Journal Fisheries and Aquatic Sciences","active":true,"publicationSubtype":{"id":10}},"title":"Evidence of prevalent heat stress in Yukon River Chinook salmon","docAbstract":"<div>Migrating adult Pacific salmon (<i>Oncorhynchus</i><span>&nbsp;</span>spp.) are sensitive to warm water (&gt;18 °C), with a range of consequences from decreased spawning success to early mortality. We examined the proportion of Yukon River Chinook salmon (<i>O. tshawytscha</i>) exhibiting evidence of heat stress to assess the potential that high temperatures contribute to freshwater adult mortality in a northern Pacific salmon population. Water temperatures greater than 18 °C have occurred almost annually in the Yukon River and correspond with low population abundance since the 1990s. Using gene transcription products and heat shock protein 70 biomarkers validated by field experiment, we identified heat stress in half of Chinook salmon examined (54%,<span>&nbsp;</span><i>n</i><span>&nbsp;</span>= 477) across three mainstem locations and three tributaries in 2016–2017. Biomarkers tracked wide variation in water temperature (14–23 °C) within a tributary. The proportion of salmon with heat stress differed between years at four of the six locations, with more prevalent heat stress in the warmer year. This work demonstrates that warming water temperatures are currently affecting northern populations of Pacific salmon.</div>","language":"English","publisher":"Canadian Science Publishing","doi":"10.1139/cjfas-2020-0209","usgsCitation":"von Biela, V.R., Bowen, L., McCormick, S.D., Carey, M.P., Donnelly, D., Waters-Dynes, S.C., Regish, A.M., Laske, S.M., Brown, R., Larson, S., Zuray, S., and Zimmerman, C.E., 2020, Evidence of prevalent heat stress in Yukon River Chinook salmon: Canadian Journal Fisheries and Aquatic Sciences, v. 77, no. 12, p. 1878-1892, https://doi.org/10.1139/cjfas-2020-0209.","productDescription":"15 p.","startPage":"1878","endPage":"1892","ipdsId":"IP-118086","costCenters":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"links":[{"id":455508,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1139/cjfas-2020-0209","text":"Publisher Index Page"},{"id":436812,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9Y0IZH2","text":"USGS data release","linkHelpText":"Gene Transcription and Heat Shock Protein 70 Abundance Results from Migrating Adult Chinook Salmon, Yukon Watershed, 2016-2017"},{"id":379684,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","otherGeospatial":"Yukon River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -166.81640625,\n              60.45721779774397\n            ],\n            [\n              -140.9765625,\n              60.45721779774397\n            ],\n            [\n              -140.9765625,\n              67.23806155909902\n            ],\n            [\n              -166.81640625,\n              67.23806155909902\n            ],\n            [\n              -166.81640625,\n              60.45721779774397\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"77","issue":"12","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"von Biela, Vanessa R. 0000-0002-7139-5981 vvonbiela@usgs.gov","orcid":"https://orcid.org/0000-0002-7139-5981","contributorId":3104,"corporation":false,"usgs":true,"family":"von Biela","given":"Vanessa","email":"vvonbiela@usgs.gov","middleInitial":"R.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":120,"text":"Alaska Science Center Water","active":true,"usgs":true},{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":802812,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bowen, Lizabeth 0000-0001-9115-4336 lbowen@usgs.gov","orcid":"https://orcid.org/0000-0001-9115-4336","contributorId":4539,"corporation":false,"usgs":true,"family":"Bowen","given":"Lizabeth","email":"lbowen@usgs.gov","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":802813,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"McCormick, Stephen D. 0000-0003-0621-6200 smccormick@usgs.gov","orcid":"https://orcid.org/0000-0003-0621-6200","contributorId":139214,"corporation":false,"usgs":true,"family":"McCormick","given":"Stephen","email":"smccormick@usgs.gov","middleInitial":"D.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":802814,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Carey, Michael P. 0000-0002-3327-8995 mcarey@usgs.gov","orcid":"https://orcid.org/0000-0002-3327-8995","contributorId":5397,"corporation":false,"usgs":true,"family":"Carey","given":"Michael","email":"mcarey@usgs.gov","middleInitial":"P.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true},{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":120,"text":"Alaska Science Center Water","active":true,"usgs":true}],"preferred":true,"id":802815,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Donnelly, Daniel S. 0000-0001-9456-885X","orcid":"https://orcid.org/0000-0001-9456-885X","contributorId":243180,"corporation":false,"usgs":false,"family":"Donnelly","given":"Daniel S.","affiliations":[{"id":48651,"text":"Formally USGS Alaska Science Center","active":true,"usgs":false}],"preferred":false,"id":802816,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Waters-Dynes, Shannon C. 0000-0002-9707-4684 swaters@usgs.gov","orcid":"https://orcid.org/0000-0002-9707-4684","contributorId":5826,"corporation":false,"usgs":true,"family":"Waters-Dynes","given":"Shannon","email":"swaters@usgs.gov","middleInitial":"C.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":802817,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Regish, Amy M. 0000-0003-4747-4265 aregish@usgs.gov","orcid":"https://orcid.org/0000-0003-4747-4265","contributorId":5415,"corporation":false,"usgs":true,"family":"Regish","given":"Amy","email":"aregish@usgs.gov","middleInitial":"M.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":802818,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Laske, Sarah M. 0000-0002-6096-0420 slaske@usgs.gov","orcid":"https://orcid.org/0000-0002-6096-0420","contributorId":204872,"corporation":false,"usgs":true,"family":"Laske","given":"Sarah","email":"slaske@usgs.gov","middleInitial":"M.","affiliations":[{"id":120,"text":"Alaska Science Center Water","active":true,"usgs":true},{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":802819,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Brown, Randy J","contributorId":243248,"corporation":false,"usgs":false,"family":"Brown","given":"Randy J","affiliations":[{"id":48666,"text":"USFWS, Fairbanks, Alaska","active":true,"usgs":false}],"preferred":false,"id":802820,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Larson, Sean","contributorId":243250,"corporation":false,"usgs":false,"family":"Larson","given":"Sean","email":"","affiliations":[{"id":7058,"text":"Alaska Department of Fish and Game","active":true,"usgs":false}],"preferred":false,"id":802821,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Zuray, Stan","contributorId":243642,"corporation":false,"usgs":false,"family":"Zuray","given":"Stan","affiliations":[{"id":48764,"text":"Rapids Research","active":true,"usgs":false}],"preferred":false,"id":802822,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Zimmerman, Christian E. 0000-0002-3646-0688 czimmerman@usgs.gov","orcid":"https://orcid.org/0000-0002-3646-0688","contributorId":410,"corporation":false,"usgs":true,"family":"Zimmerman","given":"Christian","email":"czimmerman@usgs.gov","middleInitial":"E.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":120,"text":"Alaska Science Center Water","active":true,"usgs":true},{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":802823,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70215215,"text":"70215215 - 2020 - Analysis of genomic sequence data reveals the origin and evolutionary separation of Hawaiian hoary bat populations","interactions":[],"lastModifiedDate":"2020-10-15T13:15:29.761795","indexId":"70215215","displayToPublicDate":"2020-08-27T06:55:17","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3832,"text":"Genome Biology and Evolution","active":true,"publicationSubtype":{"id":10}},"title":"Analysis of genomic sequence data reveals the origin and evolutionary separation of Hawaiian hoary bat populations","docAbstract":"<p><span>We examine the genetic history and population status of Hawaiian hoary bats (</span><i>Lasiurus semotus</i><span>), the most isolated bats on Earth, and their relationship to northern hoary bats (</span><i>Lasiurus cinereus</i><span>), through whole-genome analysis of single-nucleotide polymorphisms mapped to a de novo-assembled reference genome. Profiles of genomic diversity and divergence indicate that Hawaiian hoary bats are distinct from northern hoary bats, and form a monophyletic group, indicating a single ancestral colonization event 1.34 Ma, followed by substantial divergence between islands beginning 0.51 Ma. Phylogenetic analysis indicates Maui is central to the radiation across the archipelago, with the southward expansion to Hawai‘i and westward to O‘ahu and Kaua‘i. Because this endangered species is of conservation concern, a clearer understanding of the population genetic structure of this bat in the Hawaiian Islands is of timely importance.</span></p>","language":"English","publisher":"Oxford Academic","doi":"10.1093/gbe/evaa137","usgsCitation":"Pinzari, C., Kang, L., Michalak, P., Jermiin, L.S., Price, D., and Bonaccorso, F., 2020, Analysis of genomic sequence data reveals the origin and evolutionary separation of Hawaiian hoary bat populations: Genome Biology and Evolution, v. 12, no. 9, p. 1504-1514, https://doi.org/10.1093/gbe/evaa137.","productDescription":"11 p.","startPage":"1504","endPage":"1514","ipdsId":"IP-080029","costCenters":[{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true}],"links":[{"id":455511,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/gbe/evaa137","text":"Publisher Index Page"},{"id":379341,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Hawaii","otherGeospatial":"Hawai'i, Kaua'i, Maui, O'ahu","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -156.016845703125,\n              18.8335153964335\n            ],\n            [\n              -154.68749999999997,\n              18.8335153964335\n            ],\n            [\n              -154.68749999999997,\n              20.437307950568957\n            ],\n            [\n              -156.016845703125,\n              20.437307950568957\n            ],\n            [\n              -156.016845703125,\n              18.8335153964335\n            ]\n          ]\n        ]\n      }\n    },\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -156.81884765625,\n              20.550508894195637\n            ],\n            [\n              -155.80810546875,\n              20.550508894195637\n            ],\n            [\n              -155.80810546875,\n              21.01272715296389\n            ],\n            [\n              -156.81884765625,\n              21.01272715296389\n            ],\n            [\n              -156.81884765625,\n              20.550508894195637\n            ]\n          ]\n        ]\n      }\n    },\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -158.5107421875,\n              21.197216077387107\n            ],\n            [\n              -157.576904296875,\n              21.197216077387107\n            ],\n            [\n              -157.576904296875,\n              21.70847301324597\n            ],\n            [\n              -158.5107421875,\n              21.70847301324597\n            ],\n            [\n              -158.5107421875,\n              21.197216077387107\n            ]\n          ]\n        ]\n      }\n    },\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -159.9169921875,\n              21.790107059807873\n            ],\n            [\n              -159.1259765625,\n              21.790107059807873\n            ],\n            [\n              -159.1259765625,\n              22.28909641872304\n            ],\n            [\n              -159.9169921875,\n              22.28909641872304\n            ],\n            [\n              -159.9169921875,\n              21.790107059807873\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"12","issue":"9","noUsgsAuthors":false,"publicationDate":"2020-08-27","publicationStatus":"PW","contributors":{"authors":[{"text":"Pinzari, Corinna A. 0000-0001-9794-7564","orcid":"https://orcid.org/0000-0001-9794-7564","contributorId":208455,"corporation":false,"usgs":false,"family":"Pinzari","given":"Corinna A.","affiliations":[{"id":13341,"text":"Hawai‘i Cooperative Studies Unit, University of Hawai‘i at Hilo","active":true,"usgs":false}],"preferred":false,"id":801213,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kang, Lin","contributorId":192324,"corporation":false,"usgs":false,"family":"Kang","given":"Lin","email":"","affiliations":[],"preferred":false,"id":801214,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Michalak, Pawel","contributorId":139209,"corporation":false,"usgs":false,"family":"Michalak","given":"Pawel","email":"","affiliations":[{"id":12694,"text":"Virginia Tech","active":true,"usgs":false}],"preferred":false,"id":801215,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Jermiin, Lars S","contributorId":241599,"corporation":false,"usgs":false,"family":"Jermiin","given":"Lars","email":"","middleInitial":"S","affiliations":[{"id":16807,"text":"Australian National University","active":true,"usgs":false}],"preferred":false,"id":801216,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Price, Donald K","contributorId":241601,"corporation":false,"usgs":false,"family":"Price","given":"Donald K","affiliations":[{"id":33776,"text":"University of Nevada, Las Vegas","active":true,"usgs":false}],"preferred":false,"id":801217,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Bonaccorso, Frank 0000-0002-5490-3083 fbonaccorso@usgs.gov","orcid":"https://orcid.org/0000-0002-5490-3083","contributorId":143709,"corporation":false,"usgs":true,"family":"Bonaccorso","given":"Frank","email":"fbonaccorso@usgs.gov","affiliations":[{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true},{"id":5049,"text":"Pacific Islands Ecosys Research Center","active":true,"usgs":true}],"preferred":true,"id":801218,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70212677,"text":"fs20203044 - 2020 - Water priorities for the Nation—U.S. Geological Survey Integrated Water Availability Assessments","interactions":[],"lastModifiedDate":"2020-08-27T15:56:10.141621","indexId":"fs20203044","displayToPublicDate":"2020-08-26T19:25:00","publicationYear":"2020","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2020-3044","displayTitle":"Water Priorities for the Nation—U.S. Geological Survey Integrated Water Availability Assessments","title":"Water priorities for the Nation—U.S. Geological Survey Integrated Water Availability Assessments","docAbstract":"<p>The United States faces growing challenges to its water supply, infrastructure, and aquatic ecosystems because of population growth, climate change, floods and droughts, and aging water delivery systems. To help address these challenges, the U.S. Geological Survey (USGS) Water Resources Mission Area has established new strategic priorities that capitalize on the operational and scientific strengths of the USGS to address these complex societal issues. The USGS Integrated Water Availability Assessment Program within the Water Resources Mission Area will provide nationally consistent assessments of water available for human and ecological needs and identify factors that limit water availability. Integrated Water Availability Assessments will assess current conditions, long-term trends, factors responsible for current conditions and observed trends, and provide forecasts of future changes at national and regional scales.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20203044","usgsCitation":"Miller, M.P., Clark, B.R., Eberts, S.M., Lambert, P.M., and Toccalino, P., 2020, Water priorities for the Nation—U.S. Geological Survey Integrated Water Availability Assessments: U.S. Geological Survey Fact Sheet 2020–3044, 2 p., https://doi.org/10.3133/fs20203044.","productDescription":"2 p.","numberOfPages":"2","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-119143","costCenters":[{"id":38131,"text":"WMA - Office of Planning and Programming","active":true,"usgs":true}],"links":[{"id":377858,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2020/3044/coverthb.jpg"},{"id":377897,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2020/3044/fs20203044.pdf","text":"Report","size":"977 KB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2020-3044"}],"country":"United States","otherGeospatial":"Conterminous United States","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"geometry\": {\n        \"type\": \"MultiPolygon\",\n        \"coordinates\": [\n          [\n            [\n              [\n                -94.81758,\n                49.38905\n              ],\n              [\n                -94.64,\n                48.84\n              ],\n              [\n                -94.32914,\n                48.67074\n              ],\n              [\n                -93.63087,\n                48.60926\n              ],\n              [\n                -92.61,\n                48.45\n              ],\n              [\n                -91.64,\n                48.14\n              ],\n              [\n                -90.83,\n                48.27\n              ],\n              [\n                -89.6,\n                48.01\n              ],\n              [\n                -89.27292,\n                48.01981\n              ],\n              [\n                -88.37811,\n                48.30292\n              ],\n              [\n                -87.43979,\n                47.94\n              ],\n              [\n                -86.46199,\n                47.55334\n              ],\n              [\n                -85.65236,\n                47.22022\n              ],\n              [\n                -84.87608,\n                46.90008\n              ],\n              [\n                -84.77924,\n                46.6371\n              ],\n              [\n                -84.54375,\n                46.53868\n              ],\n              [\n                -84.6049,\n                46.4396\n              ],\n              [\n                -84.3367,\n                46.40877\n              ],\n              [\n                -84.14212,\n                46.51223\n              ],\n              [\n                -84.09185,\n                46.27542\n              ],\n              [\n                -83.89077,\n                46.11693\n              ],\n              [\n                -83.61613,\n                46.11693\n              ],\n              [\n                -83.46955,\n                45.99469\n              ],\n              [\n                -83.59285,\n                45.81689\n              ],\n              [\n                -82.55092,\n                45.34752\n              ],\n              [\n                -82.33776,\n                44.44\n              ],\n              [\n                -82.13764,\n                43.57109\n              ],\n              [\n                -82.43,\n                42.98\n              ],\n              [\n                -82.9,\n                42.43\n              ],\n              [\n                -83.12,\n                42.08\n              ],\n              [\n                -83.142,\n                41.97568\n              ],\n              [\n                -83.02981,\n                41.8328\n              ],\n              [\n                -82.69009,\n                41.67511\n              ],\n              [\n                -82.43928,\n                41.67511\n              ],\n              [\n                -81.27775,\n                42.20903\n              ],\n              [\n                -80.24745,\n                42.3662\n              ],\n              [\n                -78.93936,\n                42.86361\n              ],\n              [\n                -78.92,\n                42.965\n              ],\n              [\n                -79.01,\n                43.27\n              ],\n              [\n                -79.17167,\n                43.46634\n              ],\n              [\n                -78.72028,\n                43.62509\n              ],\n              [\n                -77.73789,\n                43.62906\n              ],\n              [\n                -76.82003,\n                43.62878\n              ],\n              [\n                -76.5,\n                44.01846\n              ],\n              [\n                -76.375,\n                44.09631\n              ],\n              [\n                -75.31821,\n                44.81645\n              ],\n              [\n                -74.867,\n                45.00048\n              ],\n              [\n                -73.34783,\n                45.00738\n              ],\n              [\n                -71.50506,\n                45.0082\n              ],\n              [\n                -71.405,\n                45.255\n              ],\n              [\n                -71.08482,\n                45.30524\n              ],\n              [\n                -70.66,\n                45.46\n              ],\n              [\n                -70.305,\n                45.915\n              ],\n              [\n                -69.99997,\n                46.69307\n              ],\n              [\n                -69.23722,\n                47.44778\n              ],\n              [\n                -68.905,\n                47.185\n              ],\n              [\n                -68.23444,\n                47.35486\n              ],\n              [\n                -67.79046,\n                47.06636\n              ],\n              [\n                -67.79134,\n                45.70281\n              ],\n              [\n                -67.13741,\n                45.13753\n              ],\n              [\n                -66.96466,\n                44.8097\n              ],\n              [\n                -68.03252,\n                44.3252\n              ],\n              [\n                -69.06,\n                43.98\n              ],\n              [\n                -70.11617,\n                43.68405\n              ],\n              [\n                -70.64548,\n                43.09024\n              ],\n              [\n                -70.81489,\n                42.8653\n              ],\n              [\n                -70.825,\n                42.335\n              ],\n              [\n                -70.495,\n                41.805\n              ],\n              [\n                -70.08,\n                41.78\n              ],\n              [\n                -70.185,\n                42.145\n              ],\n              [\n                -69.88497,\n                41.92283\n              ],\n              [\n                -69.96503,\n                41.63717\n              ],\n              [\n                -70.64,\n                41.475\n              ],\n              [\n                -71.12039,\n                41.49445\n              ],\n              [\n                -71.86,\n                41.32\n              ],\n              [\n                -72.295,\n                41.27\n              ],\n              [\n                -72.87643,\n                41.22065\n              ],\n              [\n                -73.71,\n                40.9311\n              ],\n              [\n                -72.24126,\n                41.11948\n              ],\n              [\n                -71.945,\n                40.93\n              ],\n              [\n                -73.345,\n                40.63\n              ],\n              [\n                -73.982,\n                40.628\n              ],\n              [\n                -73.95232,\n                40.75075\n              ],\n              [\n                -74.25671,\n                40.47351\n              ],\n              [\n                -73.96244,\n                40.42763\n              ],\n              [\n                -74.17838,\n                39.70926\n              ],\n              [\n                -74.90604,\n                38.93954\n              ],\n              [\n                -74.98041,\n                39.1964\n              ],\n              [\n                -75.20002,\n                39.24845\n              ],\n              [\n                -75.52805,\n                39.4985\n              ],\n              [\n                -75.32,\n                38.96\n              ],\n              [\n                -75.07183,\n                38.78203\n              ],\n              [\n                -75.05673,\n                38.40412\n              ],\n              [\n                -75.37747,\n                38.01551\n              ],\n              [\n                -75.94023,\n                37.21689\n              ],\n              [\n                -76.03127,\n                37.2566\n              ],\n              [\n                -75.72205,\n                37.93705\n              ],\n              [\n                -76.23287,\n                38.31921\n              ],\n              [\n                -76.35,\n                39.15\n              ],\n              [\n                -76.54272,\n                38.71762\n              ],\n              [\n                -76.32933,\n                38.08326\n              ],\n              [\n                -76.99,\n                38.23999\n              ],\n              [\n                -76.30162,\n                37.91794\n              ],\n              [\n                -76.25874,\n                36.9664\n              ],\n              [\n                -75.9718,\n                36.89726\n              ],\n              [\n                -75.86804,\n                36.55125\n              ],\n              [\n                -75.72749,\n                35.55074\n              ],\n              [\n                -76.36318,\n                34.80854\n              ],\n              [\n                -77.39763,\n                34.51201\n              ],\n              [\n                -78.05496,\n                33.92547\n              ],\n              [\n                -78.55435,\n                33.86133\n              ],\n              [\n                -79.06067,\n                33.49395\n              ],\n              [\n                -79.20357,\n                33.15839\n              ],\n              [\n                -80.30132,\n                32.50935\n              ],\n              [\n                -80.86498,\n                32.0333\n              ],\n              [\n                -81.33629,\n                31.44049\n              ],\n              [\n                -81.49042,\n                30.72999\n              ],\n              [\n                -81.31371,\n                30.03552\n              ],\n              [\n                -80.98,\n                29.18\n              ],\n              [\n                -80.53558,\n                28.47213\n              ],\n              [\n                -80.53,\n                28.04\n              ],\n              [\n                -80.05654,\n                26.88\n              ],\n              [\n                -80.08801,\n                26.20576\n              ],\n              [\n                -80.13156,\n                25.81677\n              ],\n              [\n                -80.38103,\n                25.20616\n              ],\n              [\n                -80.68,\n                25.08\n              ],\n              [\n                -81.17213,\n                25.20126\n              ],\n              [\n                -81.33,\n                25.64\n              ],\n              [\n                -81.71,\n                25.87\n              ],\n              [\n                -82.24,\n                26.73\n              ],\n              [\n                -82.70515,\n                27.49504\n              ],\n              [\n                -82.85526,\n                27.88624\n              ],\n              [\n                -82.65,\n                28.55\n              ],\n              [\n                -82.93,\n                29.1\n              ],\n              [\n                -83.70959,\n                29.93656\n              ],\n              [\n                -84.1,\n                30.09\n              ],\n              [\n                -85.10882,\n                29.63615\n              ],\n              [\n                -85.28784,\n                29.68612\n              ],\n              [\n                -85.7731,\n                30.15261\n              ],\n              [\n                -86.4,\n                30.4\n              ],\n              [\n                -87.53036,\n                30.27433\n              ],\n              [\n                -88.41782,\n                30.3849\n              ],\n              [\n                -89.18049,\n                30.31598\n              ],\n              [\n                -89.59383,\n                30.15999\n              ],\n              [\n                -89.41373,\n                29.89419\n              ],\n              [\n                -89.43,\n                29.48864\n              ],\n              [\n                -89.21767,\n                29.29108\n              ],\n              [\n                -89.40823,\n                29.15961\n              ],\n              [\n                -89.77928,\n                29.30714\n              ],\n              [\n                -90.15463,\n                29.11743\n              ],\n              [\n                -90.88022,\n                29.14854\n              ],\n              [\n                -91.62678,\n                29.677\n              ],\n              [\n                -92.49906,\n                29.5523\n              ],\n              [\n                -93.22637,\n                29.78375\n              ],\n              [\n                -93.84842,\n                29.71363\n              ],\n              [\n                -94.69,\n                29.48\n              ],\n              [\n                -95.60026,\n                28.73863\n              ],\n              [\n                -96.59404,\n                28.30748\n              ],\n              [\n                -97.14,\n                27.83\n              ],\n              [\n                -97.37,\n                27.38\n              ],\n              [\n                -97.38,\n                26.69\n              ],\n              [\n                -97.33,\n                26.21\n              ],\n              [\n                -97.14,\n                25.87\n              ],\n              [\n                -97.53,\n                25.84\n              ],\n              [\n                -98.24,\n                26.06\n              ],\n              [\n                -99.02,\n                26.37\n              ],\n              [\n                -99.3,\n                26.84\n              ],\n              [\n                -99.52,\n                27.54\n              ],\n              [\n                -100.11,\n                28.11\n              ],\n              [\n                -100.45584,\n                28.69612\n              ],\n              [\n                -100.9576,\n                29.38071\n              ],\n              [\n                -101.6624,\n                29.7793\n              ],\n              [\n                -102.48,\n                29.76\n              ],\n              [\n                -103.11,\n                28.97\n              ],\n              [\n                -103.94,\n                29.27\n              ],\n              [\n                -104.45697,\n                29.57196\n              ],\n              [\n                -104.70575,\n                30.12173\n              ],\n              [\n                -105.03737,\n                30.64402\n              ],\n              [\n                -105.63159,\n                31.08383\n              ],\n              [\n                -106.1429,\n                31.39995\n              ],\n              [\n                -106.50759,\n                31.75452\n              ],\n              [\n                -108.24,\n                31.75485\n              ],\n              [\n                -108.24194,\n                31.34222\n              ],\n              [\n                -109.035,\n                31.34194\n              ],\n              [\n                -111.02361,\n                31.33472\n              ],\n              [\n                -113.30498,\n                32.03914\n              ],\n              [\n                -114.815,\n                32.52528\n              ],\n              [\n                -114.72139,\n                32.72083\n              ],\n              [\n                -115.99135,\n                32.61239\n              ],\n              [\n                -117.12776,\n                32.53534\n              ],\n              [\n                -117.29594,\n                33.04622\n              ],\n              [\n                -117.944,\n                33.62124\n              ],\n              [\n                -118.4106,\n                33.74091\n              ],\n              [\n                -118.51989,\n                34.02778\n              ],\n              [\n                -119.081,\n                34.078\n              ],\n              [\n                -119.43884,\n                34.34848\n              ],\n              [\n                -120.36778,\n                34.44711\n              ],\n              [\n                -120.62286,\n                34.60855\n              ],\n              [\n                -120.74433,\n                35.15686\n              ],\n              [\n                -121.71457,\n                36.16153\n              ],\n              [\n                -122.54747,\n                37.55176\n              ],\n              [\n                -122.51201,\n                37.78339\n              ],\n              [\n                -122.95319,\n                38.11371\n              ],\n              [\n                -123.7272,\n                38.95166\n              ],\n              [\n                -123.86517,\n                39.76699\n              ],\n              [\n                -124.39807,\n                40.3132\n              ],\n              [\n                -124.17886,\n                41.14202\n              ],\n              [\n                -124.2137,\n                41.99964\n              ],\n              [\n                -124.53284,\n                42.76599\n              ],\n              [\n                -124.14214,\n                43.70838\n              ],\n              [\n                -124.02053,\n                44.6159\n              ],\n              [\n                -123.89893,\n                45.52341\n              ],\n              [\n                -124.07963,\n                46.86475\n              ],\n              [\n                -124.39567,\n                47.72017\n              ],\n              [\n                -124.68721,\n                48.18443\n              ],\n              [\n                -124.5661,\n                48.37971\n              ],\n              [\n                -123.12,\n                48.04\n              ],\n              [\n                -122.58736,\n                47.096\n              ],\n              [\n                -122.34,\n                47.36\n              ],\n              [\n                -122.5,\n                48.18\n              ],\n              [\n                -122.84,\n                49\n              ],\n              [\n                -120,\n                49\n              ],\n              [\n                -117.03121,\n                49\n              ],\n              [\n                -116.04818,\n                49\n              ],\n              [\n                -113,\n                49\n              ],\n              [\n                -110.05,\n                49\n              ],\n              [\n                -107.05,\n                49\n              ],\n              [\n                -104.04826,\n                48.99986\n              ],\n              [\n                -100.65,\n                49\n              ],\n              [\n                -97.22872,\n                49.0007\n              ],\n              [\n                -95.15907,\n                49\n              ],\n              [\n                -95.15609,\n                49.38425\n              ],\n              [\n                -94.81758,\n                49.38905\n              ]\n            ]\n          ]\n        ]\n      },\n      \"properties\": {\n        \"name\": \"United States\"\n      }\n    }\n  ]\n}","contact":"<p><a href=\"https://www.usgs.gov/mission-areas/water-resources\" data-mce-href=\"https://www.usgs.gov/mission-areas/water-resources\">Water Resources Mission Area</a>,<br><a href=\"https://www.usgs.gov/mission-areas/water-resources/science/integrated-water-availability-assessments-iwaas?qt-science_center_objects=0#qt-science_center_objects\" data-mce-href=\"https://www.usgs.gov/mission-areas/water-resources/science/integrated-water-availability-assessments-iwaas?qt-science_center_objects=0#qt-science_center_objects\">Integrated Water Availability Assessments Program</a><br>U.S. Geological Survey<br>12201 Sunrise Valley Drive<br>Reston, VA 20192</p><p><a href=\"https://pubs.er.usgs.gov/contact\" data-mce-href=\"../contact\">Contact Pubs Warehouse</a></p>","tableOfContents":"<ul><li>Integrated Water Availability Assessments</li><li>National Assessments</li><li>Regional Assessments</li><li>Reference Cited</li></ul>","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"publishedDate":"2020-08-26","noUsgsAuthors":false,"publicationDate":"2020-08-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Miller, Mark P. 0000-0003-1045-1772 mpmiller@usgs.gov","orcid":"https://orcid.org/0000-0003-1045-1772","contributorId":1967,"corporation":false,"usgs":true,"family":"Miller","given":"Mark","email":"mpmiller@usgs.gov","middleInitial":"P.","affiliations":[{"id":38131,"text":"WMA - Office of Planning and Programming","active":true,"usgs":true}],"preferred":true,"id":797269,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Clark, Brian R. 0000-0001-6611-3807 brclark@usgs.gov","orcid":"https://orcid.org/0000-0001-6611-3807","contributorId":1502,"corporation":false,"usgs":true,"family":"Clark","given":"Brian","email":"brclark@usgs.gov","middleInitial":"R.","affiliations":[{"id":38131,"text":"WMA - Office of Planning and Programming","active":true,"usgs":true}],"preferred":true,"id":797270,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Eberts, Sandra M. 0000-0001-5138-8293 smeberts@usgs.gov","orcid":"https://orcid.org/0000-0001-5138-8293","contributorId":127844,"corporation":false,"usgs":true,"family":"Eberts","given":"Sandra","email":"smeberts@usgs.gov","middleInitial":"M.","affiliations":[{"id":38131,"text":"WMA - Office of Planning and Programming","active":true,"usgs":true}],"preferred":true,"id":797271,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Lambert, Patrick M. 0000-0001-6808-2303 plambert@usgs.gov","orcid":"https://orcid.org/0000-0001-6808-2303","contributorId":349,"corporation":false,"usgs":true,"family":"Lambert","given":"Patrick","email":"plambert@usgs.gov","middleInitial":"M.","affiliations":[{"id":38131,"text":"WMA - Office of Planning and Programming","active":true,"usgs":true}],"preferred":true,"id":797272,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Toccalino, Patricia 0000-0003-1066-1702","orcid":"https://orcid.org/0000-0003-1066-1702","contributorId":213727,"corporation":false,"usgs":true,"family":"Toccalino","given":"Patricia","email":"","affiliations":[{"id":38131,"text":"WMA - Office of Planning and Programming","active":true,"usgs":true}],"preferred":true,"id":797273,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70212620,"text":"sir20205085 - 2020 - Grade and tonnage model for tungsten skarn deposits—2020 update","interactions":[],"lastModifiedDate":"2020-08-26T19:48:57.705019","indexId":"sir20205085","displayToPublicDate":"2020-08-26T13:45:00","publicationYear":"2020","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2020-5085","displayTitle":"Grade and Tonnage Model for Tungsten Skarn Deposits—2020 Update","title":"Grade and tonnage model for tungsten skarn deposits—2020 update","docAbstract":"<p>This report presents an updated grade and tonnage model for tungsten skarn deposits. As a critical component of the U.S. Geological Survey’s three-part form of quantitative mineral resource assessment, robust grade and tonnage models are essential to transforming mineral resource assessments into effective tools for decision makers. Using the best data available at the time of publication, this represents the first attempt in nearly 30 years to capture current mineral inventory and cumulative production data for worldwide tungsten skarn deposits. The accuracy of modern assessments of undiscovered tungsten skarn resources is highly influenced by the use of current data on the distribution of the grades and tonnages of well-explored tungsten skarn deposits. Primary factors affecting the changes to these distributions in the model presented here compared with those of previous models are the inclusion of important deposits, especially those in China that had been omitted in previous models; expanded mineral inventories resulting from increased exploration; and changes to international reporting standards. These factors have resulted in dramatic increases in average ore tonnage and slight decreases in the average grade of tungsten skarn deposits compared with previous models. Large increases in contained metal are observed among many of the individual deposits incorporated within this model that were also included in previous tungsten skarn grade and tonnage models. This report also provides recommendations for input parameters related to grade and tonnage models to use with software tools designed to facilitate the three-part form of quantitative mineral resource assessments.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20205085","usgsCitation":"Green, C.J., Lederer, G.W., Parks, H.L., and Zientek, M.L., 2020, Grade and tonnage model for tungsten skarn deposits—2020 update: U.S. Geological Survey Scientific Investigations Report 2020–5085, 23 p., https://doi.org/10.3133/sir20205085.","productDescription":"vi, 23 p.","numberOfPages":"23","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-117570","costCenters":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":377895,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2020/5085/sir20205085.pdf","text":"Report","size":"2.07 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020-5085"},{"id":377894,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2020/5085/coverthb.jpg"}],"contact":"<p><a href=\"https://www.usgs.gov/centers/emersc\" data-mce-href=\"https://www.usgs.gov/centers/emersc\">Eastern Mineral and Environmental Resources Science Center</a><br>U.S. Geological Survey<br>12201 Sunrise Valley Drive<br>954 National Center<br>Reston, VA 20192</p><p><a href=\"https://pubs.er.usgs.gov/contact\" data-mce-href=\"../contact\">Contact Pubs Warehouse</a></p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Assessment Methods</li><li>Descriptive Models</li><li>Previous Grade and Tonnage Models</li><li>Methods</li><li>Results</li><li>Discussion</li><li>Conclusion</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"publishedDate":"2020-08-24","noUsgsAuthors":false,"publicationDate":"2020-08-24","publicationStatus":"PW","contributors":{"authors":[{"text":"Green, Carlin J. 0000-0002-6557-6268 cjgreen@usgs.gov","orcid":"https://orcid.org/0000-0002-6557-6268","contributorId":193013,"corporation":false,"usgs":true,"family":"Green","given":"Carlin","email":"cjgreen@usgs.gov","middleInitial":"J.","affiliations":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":797147,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lederer, Graham W. 0000-0002-9505-9923 glederer@usgs.gov","orcid":"https://orcid.org/0000-0002-9505-9923","contributorId":176465,"corporation":false,"usgs":true,"family":"Lederer","given":"Graham","email":"glederer@usgs.gov","middleInitial":"W.","affiliations":[{"id":432,"text":"National Minerals Information Center","active":true,"usgs":true}],"preferred":false,"id":797148,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Parks, Heather L. 0000-0002-5917-6866 hparks@usgs.gov","orcid":"https://orcid.org/0000-0002-5917-6866","contributorId":4989,"corporation":false,"usgs":true,"family":"Parks","given":"Heather","email":"hparks@usgs.gov","middleInitial":"L.","affiliations":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":797149,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Zientek, Michael L. 0000-0002-8522-9626 mzientek@usgs.gov","orcid":"https://orcid.org/0000-0002-8522-9626","contributorId":2420,"corporation":false,"usgs":true,"family":"Zientek","given":"Michael","email":"mzientek@usgs.gov","middleInitial":"L.","affiliations":[{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":797150,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70228924,"text":"70228924 - 2020 - Drones provide a better method to find nests and estimate nest survival for colonial waterbirds: A demonstration with Western Grebes","interactions":[],"lastModifiedDate":"2022-02-24T19:50:09.363675","indexId":"70228924","displayToPublicDate":"2020-08-26T13:33:20","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3751,"text":"Wetlands Ecology and Management","active":true,"publicationSubtype":{"id":10}},"title":"Drones provide a better method to find nests and estimate nest survival for colonial waterbirds: A demonstration with Western Grebes","docAbstract":"<p><span>Drone use in wildlife biology has greatly increased as they become cheaper and easier to deploy in the field. In this paper we describe a less invasive method of using drones and exploring their limitations for studying colonial nesting waterbirds. Western Grebes, like most colonial nesting waterbirds, can be very sensitive to human interaction. Using a 3DR Solo quad copter equipped with a high-resolution digital camera we were able to effectively map and monitor a Western Grebe breeding colony throughout the nesting period with a series of 6 flights. We were able to use drone collected aerial imagery to model nest survival while minimizing disturbance to the birds. However, we were not able to deploy the drone at all of our study sites. Our ability to effectively deploy the drone was hindered by the environmental and vegetation characteristics of a site. Drone technology can be a useful tool, especially when studying a species sensitive to human interaction. However, there researchers should carefully consider their species and study site to evaluate if a drone is the proper tool to meet their objectives.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s11273-020-09743-y","usgsCitation":"Lachman, D., Conway, C.J., Vierling, K., and Matthews, T., 2020, Drones provide a better method to find nests and estimate nest survival for colonial waterbirds: A demonstration with Western Grebes: Wetlands Ecology and Management, v. 28, p. 837-845, https://doi.org/10.1007/s11273-020-09743-y.","productDescription":"9 p.","startPage":"837","endPage":"845","ipdsId":"IP-119243","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":396449,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Idaho","county":"Valley County","otherGeospatial":"Cascade Reservoir, Deer Flat National Wildlife Refuge, Lake Lowell","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"MultiPolygon\",\"coordinates\":[[[[-116.5113,43.8071],[-116.5124,43.7642],[-116.5126,43.7492],[-116.5118,43.7032],[-116.4691,43.6274],[-116.4712,43.4589],[-116.5141,43.4592],[-116.5131,43.4018],[-116.5129,43.3731],[-116.5133,43.3458],[-116.5123,43.3313],[-116.5126,43.3012],[-116.5122,43.2867],[-116.5181,43.2943],[-116.527,43.2978],[-116.5327,43.2996],[-116.5447,43.2998],[-116.5535,43.2997],[-116.563,43.3027],[-116.5675,43.3045],[-116.5745,43.3085],[-116.5816,43.3143],[-116.5836,43.317],[-116.5888,43.3214],[-116.5921,43.3282],[-116.5981,43.3368],[-116.6001,43.3426],[-116.6041,43.3499],[-116.6087,43.3557],[-116.6197,43.3637],[-116.6236,43.3678],[-116.6262,43.3704],[-116.6332,43.374],[-116.6377,43.3762],[-116.6447,43.3783],[-116.6549,43.3818],[-116.6645,43.3871],[-116.6834,43.4064],[-116.6918,43.4122],[-116.6995,43.417],[-116.7073,43.4233],[-116.7099,43.4264],[-116.7177,43.4322],[-116.728,43.4407],[-116.7359,43.451],[-116.7437,43.4568],[-116.7489,43.4613],[-116.7533,43.4626],[-116.761,43.4651],[-116.7674,43.4691],[-116.7752,43.4749],[-116.7799,43.484],[-116.7828,43.4944],[-116.7829,43.518],[-116.7793,43.524],[-116.784,43.5321],[-116.7971,43.546],[-116.8026,43.5591],[-116.8094,43.5722],[-116.8146,43.5776],[-116.8333,43.5891],[-116.85,43.5961],[-116.8703,43.5971],[-116.8772,43.5965],[-116.8848,43.5968],[-116.8906,43.5994],[-116.9021,43.6043],[-116.9125,43.6114],[-116.9216,43.6194],[-116.9301,43.6256],[-116.9397,43.6295],[-116.9455,43.6335],[-116.9539,43.6375],[-116.9626,43.6505],[-116.9621,43.6537],[-116.9635,43.6582],[-116.9642,43.6609],[-116.9637,43.6628],[-116.9657,43.6668],[-116.9709,43.6717],[-116.9812,43.6743],[-116.9913,43.6732],[-117.0046,43.6748],[-117.0273,43.6816],[-117.0271,43.7786],[-117.027,43.8069],[-117.0271,43.8082],[-117.0269,43.8091],[-117.0242,43.8154],[-117.0237,43.8166],[-117.0215,43.8215],[-117.021,43.8228],[-117.0254,43.8257],[-117.0323,43.8298],[-117.0296,43.8377],[-117.0218,43.843],[-117.0174,43.8403],[-117.011,43.8407],[-117.0084,43.8429],[-117.0094,43.8462],[-117.01,43.8505],[-117.0124,43.8529],[-117.0192,43.8559],[-117.0203,43.8594],[-117.0095,43.8631],[-116.9975,43.8648],[-116.9894,43.8639],[-116.9826,43.8669],[-116.9815,43.8704],[-116.9818,43.8772],[-116.9818,43.882],[-116.9507,43.8826],[-116.9529,43.8364],[-116.9123,43.8358],[-116.9119,43.822],[-116.8913,43.8217],[-116.8923,43.8077],[-116.8517,43.8074],[-116.8518,43.7928],[-116.7918,43.7926],[-116.7919,43.7999],[-116.7516,43.8001],[-116.7511,43.807],[-116.7113,43.8072],[-116.5113,43.8071]]],[[[-114.695,45.1958],[-114.7002,45.1898],[-114.7086,45.1885],[-114.7157,45.188],[-114.7228,45.1811],[-114.7228,45.1656],[-114.7227,45.1647],[-114.7227,45.1633],[-114.7234,45.1629],[-114.7253,45.1583],[-114.7324,45.1528],[-114.7291,45.1451],[-114.7278,45.1323],[-114.7284,45.1295],[-114.7284,45.1282],[-114.7207,45.1199],[-114.7284,45.1094],[-114.729,45.1072],[-114.7296,45.0998],[-114.7316,45.0948],[-114.727,45.0921],[-114.7186,45.0894],[-114.7192,45.0871],[-114.725,45.0802],[-114.727,45.0747],[-114.7276,45.0688],[-114.7269,45.0642],[-114.7256,45.0606],[-114.725,45.0569],[-114.7236,45.0478],[-114.7236,45.0414],[-114.7243,45.035],[-114.7268,45.0286],[-114.7255,45.0195],[-114.7242,45.0136],[-114.7216,45.0076],[-114.7242,45.0053],[-114.7267,45.0035],[-114.7293,45.0021],[-114.7287,44.9985],[-114.7293,44.9921],[-114.7293,44.9912],[-114.7325,44.9848],[-114.735,44.9811],[-114.7344,44.9766],[-114.733,44.9661],[-114.7337,44.961],[-114.7356,44.9569],[-114.7362,44.9551],[-114.7343,44.9533],[-114.7291,44.9492],[-114.7252,44.941],[-114.7226,44.9373],[-114.7226,44.9319],[-114.7348,44.9282],[-114.7368,44.9254],[-114.7297,44.9213],[-114.7284,44.9181],[-114.7297,44.9145],[-114.7309,44.9122],[-114.7322,44.9113],[-114.7309,44.9076],[-114.7257,44.9035],[-114.727,44.9017],[-114.7315,44.8981],[-114.7251,44.8908],[-114.7315,44.8848],[-114.7327,44.8802],[-114.7405,44.8798],[-114.7482,44.8807],[-114.7488,44.8779],[-114.7527,44.8729],[-114.7643,44.8752],[-114.7681,44.8706],[-114.7655,44.8629],[-114.761,44.8551],[-114.7706,44.8523],[-114.7667,44.8455],[-114.7661,44.8441],[-114.7693,44.8428],[-114.7712,44.8418],[-114.7738,44.8414],[-114.777,44.8427],[-114.7835,44.8423],[-114.788,44.84],[-114.7924,44.8354],[-114.7956,44.8322],[-114.7969,44.8308],[-114.7988,44.8258],[-114.8027,44.8217],[-114.8054,44.8186],[-114.8059,44.818],[-114.8084,44.8148],[-114.8123,44.8103],[-114.8161,44.8071],[-114.8213,44.8043],[-114.8296,44.8025],[-114.8373,44.7974],[-114.8424,44.7924],[-114.845,44.7883],[-114.8469,44.7864],[-114.8507,44.7842],[-114.8552,44.7832],[-114.861,44.7828],[-114.8687,44.7805],[-114.8777,44.7754],[-114.8867,44.7695],[-114.895,44.7635],[-114.9001,44.7603],[-114.9033,44.7585],[-114.911,44.7575],[-114.9155,44.7548],[-114.9148,44.7502],[-114.9155,44.7447],[-114.9193,44.7429],[-114.9218,44.7379],[-114.9321,44.7351],[-114.9392,44.7314],[-114.9462,44.7264],[-114.9519,44.7227],[-114.9564,44.7209],[-114.959,44.72],[-114.968,44.7254],[-114.9764,44.7286],[-114.9912,44.7299],[-114.9989,44.7239],[-115.0052,44.7184],[-115.0097,44.7157],[-115.0104,44.7179],[-115.013,44.7229],[-115.0156,44.7316],[-115.0164,44.7458],[-115.0228,44.7453],[-115.024,44.7412],[-115.0279,44.7361],[-115.0291,44.7334],[-115.033,44.7361],[-115.0318,44.7462],[-115.0402,44.7516],[-115.0505,44.7538],[-115.0602,44.757],[-115.0666,44.7602],[-115.0731,44.7683],[-115.0776,44.771],[-115.0809,44.7715],[-115.0854,44.7729],[-115.0885,44.7687],[-115.0982,44.7641],[-115.1065,44.76],[-115.1154,44.7563],[-115.1301,44.7466],[-115.1384,44.7393],[-115.1422,44.7352],[-115.1461,44.732],[-115.1486,44.7297],[-115.146,44.7242],[-115.1434,44.7219],[-115.1408,44.7192],[-115.1401,44.7146],[-115.1433,44.711],[-115.1446,44.7096],[-115.1465,44.7073],[-115.149,44.7018],[-115.1496,44.6932],[-115.1521,44.6886],[-115.1533,44.6799],[-115.1564,44.6726],[-115.1621,44.6644],[-115.1627,44.6562],[-115.169,44.6493],[-115.176,44.6456],[-115.1907,44.6373],[-115.2002,44.6249],[-115.2099,44.6304],[-115.2144,44.6303],[-115.224,44.6316],[-115.2259,44.6266],[-115.2233,44.623],[-115.2239,44.6203],[-115.2258,44.618],[-115.229,44.6193],[-115.2367,44.6211],[-115.2457,44.6192],[-115.2528,44.6187],[-115.2546,44.6146],[-115.2572,44.6105],[-115.259,44.6077],[-115.2668,44.6095],[-115.2758,44.6117],[-115.2815,44.6099],[-115.2859,44.6039],[-115.291,44.5971],[-115.2954,44.5906],[-115.3017,44.5806],[-115.3003,44.571],[-115.2982,44.5583],[-115.2943,44.5519],[-115.2897,44.5442],[-115.2928,44.5359],[-115.2896,44.5305],[-115.2806,44.5287],[-115.2806,44.5255],[-115.2792,44.5196],[-115.2683,44.5197],[-115.2574,44.5197],[-115.2466,44.5221],[-115.2471,44.5166],[-115.2452,44.5143],[-115.2445,44.5134],[-115.2407,44.5116],[-115.2354,44.4984],[-115.2303,44.4953],[-115.2263,44.4825],[-115.2236,44.4761],[-115.2326,44.4701],[-115.2331,44.4665],[-115.2254,44.4647],[-115.2222,44.462],[-115.2273,44.4583],[-115.2292,44.457],[-115.2317,44.4501],[-115.231,44.4483],[-115.2304,44.4464],[-115.2277,44.4383],[-115.2257,44.4296],[-115.2282,44.4214],[-115.2338,44.4127],[-115.2389,44.4086],[-115.2408,44.4017],[-115.2452,44.3958],[-115.2444,44.3848],[-115.2495,44.3807],[-115.2584,44.3747],[-115.264,44.3656],[-115.2723,44.3605],[-115.2786,44.3564],[-115.2818,44.3536],[-115.2811,44.3481],[-115.2817,44.3454],[-115.2874,44.3445],[-115.2906,44.3444],[-115.2931,44.3399],[-115.2982,44.3421],[-115.3072,44.3457],[-115.3252,44.3515],[-115.3322,44.3465],[-115.3462,44.3478],[-115.3526,44.3473],[-115.3583,44.3431],[-115.3512,44.3381],[-115.3543,44.3313],[-115.353,44.3272],[-115.3415,44.3241],[-115.3426,44.3154],[-115.3458,44.3158],[-115.3497,44.3154],[-115.3528,44.3108],[-115.3553,44.3048],[-115.3603,44.2998],[-115.3724,44.2979],[-115.3826,44.2901],[-115.3882,44.2823],[-115.3888,44.2773],[-115.3893,44.2723],[-115.3919,44.269],[-115.3988,44.2644],[-115.4005,44.2635],[-115.3992,44.2596],[-115.4051,44.2587],[-115.4095,44.2643],[-115.4135,44.2668],[-115.422,44.2663],[-115.4297,44.262],[-115.4418,44.2553],[-115.4412,44.2494],[-115.4502,44.2467],[-115.4585,44.2428],[-115.4655,44.2412],[-115.4744,44.2397],[-115.4801,44.2402],[-115.4859,44.2392],[-115.4935,44.2401],[-115.4999,44.2409],[-115.5076,44.24],[-115.5127,44.2404],[-115.5183,44.2349],[-115.5407,44.2347],[-116.0377,44.2372],[-116.0568,44.2369],[-116.1059,44.2373],[-116.1063,44.2263],[-116.1081,44.2204],[-116.1092,44.2131],[-116.1096,44.2039],[-116.1113,44.1962],[-116.1149,44.1838],[-116.1197,44.1742],[-116.1208,44.1655],[-116.1193,44.1555],[-116.1192,44.1532],[-116.1192,44.1501],[-116.1568,44.151],[-116.2142,44.1521],[-116.2133,44.194],[-116.2132,44.2387],[-116.2141,44.3253],[-116.1534,44.3251],[-116.1529,44.4122],[-116.1513,44.5002],[-116.1583,44.5002],[-116.1611,44.5088],[-116.1607,44.5197],[-116.1616,44.5311],[-116.1683,44.5406],[-116.1691,44.5475],[-116.1725,44.5561],[-116.174,44.5634],[-116.1741,44.5702],[-116.1755,44.5761],[-116.1823,44.5883],[-116.1825,44.5979],[-116.1739,44.6126],[-116.1721,44.6186],[-116.1717,44.6273],[-116.1734,44.6437],[-116.1774,44.6486],[-116.1743,44.6546],[-116.1644,44.6711],[-116.1639,44.6748],[-116.1633,44.6762],[-116.1623,44.6885],[-116.1599,44.6958],[-116.1602,44.7095],[-116.1805,44.7239],[-116.1813,44.7293],[-116.1777,44.739],[-116.1766,44.7486],[-116.1818,44.7517],[-116.1936,44.7598],[-116.2002,44.7661],[-116.2067,44.7678],[-116.2087,44.7742],[-116.206,44.792],[-116.2035,44.7966],[-116.2018,44.803],[-116.1987,44.8336],[-116.1959,44.8501],[-116.1968,44.8629],[-116.1881,44.8739],[-116.1884,44.8853],[-116.1827,44.8895],[-116.1688,44.8993],[-116.1606,44.9081],[-116.1603,44.9227],[-116.1604,44.9268],[-116.1606,44.935],[-116.1607,44.9377],[-116.1544,44.9456],[-116.1479,44.9438],[-116.1421,44.9421],[-116.1357,44.9421],[-116.1337,44.9431],[-116.1293,44.945],[-116.1268,44.9509],[-116.1231,44.9578],[-116.1201,44.9638],[-116.1188,44.9665],[-116.1164,44.9743],[-116.1192,44.9802],[-116.127,44.9838],[-116.1292,44.9934],[-116.1346,45.0065],[-116.1297,45.0148],[-116.126,45.0235],[-116.1049,45.0334],[-116.1034,45.048],[-116.1016,45.054],[-116.0945,45.0568],[-116.0895,45.0623],[-116.0896,45.066],[-116.0994,45.0695],[-116.1072,45.0735],[-116.1092,45.0744],[-116.1189,45.0743],[-116.1292,45.0733],[-116.1403,45.0786],[-116.1411,45.0854],[-116.1423,45.1087],[-116.1425,45.116],[-116.135,45.1257],[-116.1345,45.1326],[-116.1327,45.1399],[-116.1264,45.1464],[-116.1209,45.1597],[-116.1138,45.1611],[-116.104,45.1562],[-116.0936,45.1545],[-116.082,45.1551],[-116.0762,45.1566],[-116.0692,45.1626],[-116.0622,45.1645],[-116.0518,45.1651],[-116.0467,45.1683],[-116.0436,45.1738],[-116.0399,45.1803],[-116.0348,45.1826],[-116.0264,45.1827],[-116.0205,45.1832],[-116.0148,45.1865],[-116.0066,45.1962],[-115.9996,45.2027],[-115.9951,45.205],[-115.9881,45.2101],[-115.9869,45.2124],[-115.9831,45.2175],[-115.9799,45.2179],[-115.9747,45.218],[-115.9688,45.213],[-115.9731,45.2043],[-115.9795,45.1988],[-115.9768,45.1961],[-115.9173,45.1962],[-115.8998,45.196],[-115.6565,45.196],[-115.5343,45.197],[-115.4754,45.1974],[-115.3828,45.1972],[-115.3123,45.1971],[-114.8303,45.1964],[-114.695,45.1958]]]]},\"properties\":{\"name\":\"Canyon\",\"state\":\"ID\"}}]}","volume":"28","noUsgsAuthors":false,"publicationDate":"2020-08-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Lachman, Deo","contributorId":280030,"corporation":false,"usgs":false,"family":"Lachman","given":"Deo","affiliations":[{"id":39599,"text":"ui","active":true,"usgs":false}],"preferred":false,"id":835914,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Conway, Courtney J. 0000-0003-0492-2953 cconway@usgs.gov","orcid":"https://orcid.org/0000-0003-0492-2953","contributorId":2951,"corporation":false,"usgs":true,"family":"Conway","given":"Courtney","email":"cconway@usgs.gov","middleInitial":"J.","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":835913,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Vierling, Kerri","contributorId":280031,"corporation":false,"usgs":false,"family":"Vierling","given":"Kerri","affiliations":[{"id":39599,"text":"ui","active":true,"usgs":false}],"preferred":false,"id":835915,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Matthews, Ty","contributorId":280032,"corporation":false,"usgs":false,"family":"Matthews","given":"Ty","affiliations":[{"id":37461,"text":"fws","active":true,"usgs":false}],"preferred":false,"id":835916,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70212769,"text":"70212769 - 2020 - Concentrations and size distribution of TiO2 and Ag engineered particles in five wastewater treatment plants in the United States","interactions":[],"lastModifiedDate":"2020-09-10T20:47:33.696034","indexId":"70212769","displayToPublicDate":"2020-08-26T11:10:56","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Concentrations and size distribution of TiO<sub>2</sub> and Ag engineered particles in five wastewater treatment plants in the United States","title":"Concentrations and size distribution of TiO2 and Ag engineered particles in five wastewater treatment plants in the United States","docAbstract":"<p><span>The growing use of engineered particles (</span><i>e.g.</i><span>, nanosized and pigment sized particles, 1 to 100 nm and 100 to 300 nm, respectively) in a variety of consumer products increases the likelihood of their release into the environment. Wastewater treatment plants (WWTPs) are an important pathways of introduction of engineered particles to the aquatic systems. This study reports the concentrations, removal efficiencies, and particle size distributions of Ag and TiO</span><sub>2</sub><span>&nbsp;engineered particles in five WWTPs in three states in the United States. The concentration of Ag engineered particles was quantified as the total Ag concentration, whereas the concentration of TiO</span><sub>2</sub><span>&nbsp;engineered particles was quantified using mass-balance calculations and shifts in the elemental ratio of Ti/Nb above their natural background elemental ratio. Ratios of Ti/Nb in all WWTP influents, activated sludges, and effluents were 2–12 times higher (</span><i>e.g.</i><span>, 519 to 3243) than the natural background Ti/Nb ratio (</span><i>e.g.</i><span>, 267 ± 9), indicating that 49–92% of Ti originates from anthropogenic sources. The concentration of TiO</span><sub>2</sub><span>&nbsp;engineered particles (in μg TiO</span><sub>2</sub><span>&nbsp;L</span><sup>−1</sup><span>) in the influent, activated sludge, and effluent varied within the ranges of 70–670, 3570–6700, and 7–30, respectively. The concentration of Ag engineered particles (in μg Ag L</span><sup>−1</sup><span>) in the influent, activated sludge, and effluent varied within the ranges of 0.11–0.33, 1.45–1.65, and 0.01–0.04, respectively. The overall removal efficiency (</span><i>e.g.</i><span>, effluent/influent concentrations) of TiO</span><sub>2</sub><span>&nbsp;engineered particles (</span><i>e.g.</i><span>, 90 to 96%) was higher than that for Ag engineered particles (</span><i>e.g.</i><span>, 82 to 95%). Particles entering WWTPs are in the nanosized range for Ag (</span><i>e.g.</i><span>, &gt;99%) and a mixture of nanosized (</span><i>e.g.</i><span>, 15 to 90%) and pigment sized particles (</span><i>e.g.</i><span>, 10 to 85%) for TiO</span><sub>2</sub><span>. Nearly all Ag (&gt;99%) and 55 to 100% of TiO</span><sub>2</sub><span>&nbsp;particles discharged to surface water with WWTP effluent are within the nanosize range. This study provides evidence that TiO</span><sub>2</sub><span>&nbsp;and Ag engineered nanomaterials enter aquatic systems with WWTP effluents, and that their concentrations are expected to increase with the increased applications of TiO</span><sub>2</sub><span>&nbsp;and Ag engineered nanomaterials in consumer products.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2020.142017","usgsCitation":"Md. Mahmudun Nabi, Wang, J., Meyer, M., Croteau, M.N., Ismail, N., and Baalousha, M., 2020, Concentrations and size distribution of TiO2 and Ag engineered particles in five wastewater treatment plants in the United States: Science of the Total Environment, v. 753, 142017, 11 p., https://doi.org/10.1016/j.scitotenv.2020.142017.","productDescription":"142017, 11 p.","ipdsId":"IP-120434","costCenters":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"links":[{"id":455516,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.scitotenv.2020.142017","text":"Publisher Index Page"},{"id":377935,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California, Massachusetts, South Carolina","city":"Amherst, Columbia, Mt. Pleasant, Palo Alto","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.23251342773438,\n              37.38161597475995\n            ],\n            [\n              -122.10067749023438,\n              37.38161597475995\n            ],\n            [\n              -122.10067749023438,\n              37.52551993630741\n            ],\n            [\n              -122.23251342773438,\n              37.52551993630741\n            ],\n            [\n              -122.23251342773438,\n              37.38161597475995\n            ]\n          ]\n        ]\n      }\n    },\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -72.55130767822266,\n              42.3643786536149\n            ],\n            [\n              -72.49500274658203,\n              42.3643786536149\n            ],\n            [\n              -72.49500274658203,\n              42.40317854182803\n            ],\n            [\n              -72.55130767822266,\n              42.40317854182803\n            ],\n            [\n              -72.55130767822266,\n              42.3643786536149\n            ]\n          ]\n        ]\n      }\n    },\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -81.0897445678711,\n              33.951049661182104\n            ],\n            [\n              -80.97610473632811,\n              33.951049661182104\n            ],\n            [\n              -80.97610473632811,\n              34.0236404659703\n            ],\n            [\n              -81.0897445678711,\n              34.0236404659703\n            ],\n            [\n              -81.0897445678711,\n              33.951049661182104\n            ]\n          ]\n        ]\n      }\n    },\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -79.90596771240234,\n              32.75306566002286\n            ],\n            [\n              -79.80966567993164,\n              32.75306566002286\n            ],\n            [\n              -79.80966567993164,\n              32.82738462221177\n            ],\n            [\n              -79.90596771240234,\n              32.82738462221177\n            ],\n            [\n              -79.90596771240234,\n              32.75306566002286\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"753","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Md. Mahmudun Nabi","contributorId":239632,"corporation":false,"usgs":false,"family":"Md. Mahmudun Nabi","affiliations":[{"id":37804,"text":"University of South Carolina","active":true,"usgs":false}],"preferred":false,"id":797436,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wang, Jingjing","contributorId":239635,"corporation":false,"usgs":false,"family":"Wang","given":"Jingjing","email":"","affiliations":[{"id":37804,"text":"University of South Carolina","active":true,"usgs":false}],"preferred":false,"id":797437,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Meyer, Madeleine","contributorId":239638,"corporation":false,"usgs":false,"family":"Meyer","given":"Madeleine","email":"","affiliations":[{"id":37804,"text":"University of South Carolina","active":true,"usgs":false}],"preferred":false,"id":797438,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Croteau, Marie Noele 0000-0003-0346-3580 mcroteau@usgs.gov","orcid":"https://orcid.org/0000-0003-0346-3580","contributorId":895,"corporation":false,"usgs":true,"family":"Croteau","given":"Marie","email":"mcroteau@usgs.gov","middleInitial":"Noele","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":797439,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Ismail, Niveen","contributorId":239641,"corporation":false,"usgs":false,"family":"Ismail","given":"Niveen","affiliations":[{"id":47946,"text":"Smith College","active":true,"usgs":false}],"preferred":false,"id":797440,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Baalousha, Mohammed","contributorId":239642,"corporation":false,"usgs":false,"family":"Baalousha","given":"Mohammed","affiliations":[{"id":37804,"text":"University of South Carolina","active":true,"usgs":false}],"preferred":false,"id":797441,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70212678,"text":"ofr20201078 - 2020 - Assessment of dissolved-selenium concentrations and loads in the Lower Gunnison River Basin, Colorado, as part of the Selenium Management Program, 2011–17","interactions":[],"lastModifiedDate":"2020-08-26T15:51:06.049297","indexId":"ofr20201078","displayToPublicDate":"2020-08-26T10:30:00","publicationYear":"2020","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2020-1078","displayTitle":"Assessment of Dissolved-Selenium Concentrations and Loads in the Lower Gunnison River Basin, Colorado, as  Part of the Selenium Management Program, 2011–17","title":"Assessment of dissolved-selenium concentrations and loads in the Lower Gunnison River Basin, Colorado, as part of the Selenium Management Program, 2011–17","docAbstract":"<p>The Gunnison Basin Selenium Management Program implemented a water-quality monitoring network in 2011 to measure concentrations of selenium in the lower Gunnison River Basin in Colorado. Selenium is a trace element that bioaccumulates in aquatic food chains. Selenium is essential for life, but elevated amounts can cause reproductive failure, deformities, and other harmful effects. The primary goal of the Selenium Management Program is to meet the State of Colorado water-quality standard of 4.6 micrograms per liter (µg/L) for dissolved selenium at the U.S. Geological Survey (USGS) streamflow-gaging station number 09152500—Gunnison River near Grand Junction, Colorado—herein referred to as “Whitewater.” The U.S. Geological Survey, in cooperation with the Bureau of Reclamation, has completed a review of dissolved-selenium data collected from the Selenium Management Program network during Water Year (WY) 2017 (October 1, 2016 through September 30, 2017) to further the understanding of the status and trends of selenium in the basin. This report presents the percentile values for selenium because regulatory agencies in Colorado make decisions based on the U.S. Environmental Protection Agency’s Clean Water Act section 303(d), which uses percentile values for concentrations. Also presented are dissolved-selenium loads at 14 sites in the lower Gunnison River Basin for WYs 2011–17. Annual dissolved-selenium loads were calculated for six sites with continuous U.S. Geological Survey streamflow-gaging stations. These six sites are referred to as “core” sites in this report. The remaining sites, which do not have streamflow-gaging stations, are referred to as “ancillary” sites in this report. During WY 2017, the loads calculated at the six core sites ranged from 306 pounds (lb) at Uncompahgre River at Colona to 12,600 lb at Whitewater, respectively.</p><p>By using discrete water-quality samples and the associated discharge measurements, instantaneous loads were calculated for 14 sites in WYs 2011–17 where discrete water-quality sampling took place. Median instantaneous loads ranged from 0.52 pounds per day (lb/d) at Uncompahgre River at Colona to 35.7 lb/d at Whitewater. Mean instantaneous loads ranged from 0.63 lb/d at Cummings Gulch at mouth to 35.5 lb/d at Whitewater. Most tributary sites in the basin had a median instantaneous dissolved-selenium load of less than 20.0 lb/d. In general, dissolved-selenium loads at Gunnison River main-stem sites showed an increase from upstream to downstream.</p><p>The State of Colorado’s water-quality standard for dissolved selenium of 4.6 µg/L was compared to the 85th percentiles for dissolved selenium at selected sites. Annual 85th percentiles for dissolved selenium were calculated by using estimated dissolved-selenium concentrations from linear regression models for the six core sites with U.S. Geological Survey streamflow-gaging stations. The 85th-percentile concentrations for WY 2017 based on this method ranged from 0.68 µg/L at Uncompahgre River at Colona to 140 µg/L at Loutzenhizer Arroyo at North River Road. The 85th percentiles for concentrations of dissolved selenium also were calculated from water-quality samples collected during WY 2017 from sites with sufficient data. The annual 85th-percentile concentrations based on the discrete samples ranged from 0.75 µg/L at Uncompahgre River at Colona to 106 µg/L at Loutzenhizer Arroyo at North River Road.</p><p>An analysis was completed for Whitewater to determine if an upward or downward trend exists for dissolved-selenium loads during two time periods. The first time period included all data at Whitewater, whereas the second time period focused on more recent data. The trend analysis indicates a decrease from 22,200 to 12,600 lb, which is a 43.1 percent (9,600 lb) reduction during the time period WY 1986 through WY 2017. The trend analysis for the annual dissolved-selenium load for WY 1995 through WY 2017 indicates a decrease of 6,600 lb per year, or 35.5 percent. An evaluation of laboratory bias was completed for selenium data which was used in the trend analysis. Findings indicated a potential positive bias of approximately 12 percent may exist in the data from October 2005 through August 2015.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20201078","collaboration":"Prepared in cooperation with the Bureau of Reclamation","usgsCitation":"Henneberg, M.F., 2020, Assessment of dissolved-selenium concentrations and loads in the Lower Gunnison River Basin, Colorado, as part of the Selenium Management Program, 2011–17: U.S. Geological Survey Open-File Report 2020–1078, 21 p., https://doi.org/10.3133/ofr20201078","productDescription":"v, 21 p.","onlineOnly":"Y","costCenters":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"links":[{"id":377861,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2020/1078/ofr20201078.pdf","text":"Report","size":"1.84 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2020-1078"},{"id":377860,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2020/1078/coverthb.jpg"}],"country":"United States","state":"Colorado","otherGeospatial":"Lower Gunnison River Basin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -108.80584716796875,\n              39.01064750994083\n            ],\n            [\n              -109.11895751953125,\n              38.8782049970615\n            ],\n            [\n              -108.6328125,\n              38.10214399750345\n            ],\n            [\n              -108.69598388671875,\n              37.77288579232439\n            ],\n            [\n              -107.87750244140625,\n              37.309014074275915\n            ],\n            [\n              -107.4462890625,\n              37.31338308990806\n            ],\n            [\n              -107.1441650390625,\n              37.727280276860036\n            ],\n            [\n              -107.18536376953125,\n              38.07620357665235\n            ],\n            [\n              -107.26776123046875,\n              38.50304202775689\n            ],\n            [\n              -107.50671386718749,\n              38.9380483825641\n            ],\n            [\n              -107.6495361328125,\n              39.115144700901475\n            ],\n            [\n              -108.80584716796875,\n              39.01064750994083\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/co-water\" data-mce-href=\"https://www.usgs.gov/centers/co-water\">Colorado Water Science Center</a><br>U.S. Geological Survey<br>Box 25046, MS-415<br>Denver, CO 80225-0046</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Methods</li><li>Assessment of Dissolved-Selenium Concentrations and Loads</li><li>Summary.</li><li>References Cited</li><li>Appendix 1. R-LOADEST Equation Forms, Regression-Model Coefficients, and Statistical Diagnostics</li></ul>","publishedDate":"2020-08-26","noUsgsAuthors":false,"publicationDate":"2020-08-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Henneberg, Mark F. 0000-0002-6991-1211 mfhenneb@usgs.gov","orcid":"https://orcid.org/0000-0002-6991-1211","contributorId":187481,"corporation":false,"usgs":true,"family":"Henneberg","given":"Mark","email":"mfhenneb@usgs.gov","middleInitial":"F.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":797274,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70241502,"text":"70241502 - 2020 - Immune and sex-biased gene expression in the threatened Mojave desert tortoise, Gopherus agassizii","interactions":[],"lastModifiedDate":"2023-03-22T13:13:36.714994","indexId":"70241502","displayToPublicDate":"2020-08-26T08:08:19","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2980,"text":"PLoS ONE","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Immune and sex-biased gene expression in the threatened Mojave desert tortoise, <i>Gopherus agassizii</i>","title":"Immune and sex-biased gene expression in the threatened Mojave desert tortoise, Gopherus agassizii","docAbstract":"<p><span>The immune system of ectotherms, particularly non-avian reptiles, remains poorly characterized regarding the genes involved in immune function, and their function in wild populations. We used RNA-Seq to explore the systemic response of Mojave desert tortoise (</span><i>Gopherus agassizii</i><span>) gene expression to three levels of&nbsp;</span><i>Mycoplasma</i><span>&nbsp;infection to better understand the host response to this bacterial pathogen. We found over an order of magnitude more genes differentially expressed between male and female tortoises (1,037 genes) than differentially expressed among immune groups (40 genes). There were 8 genes differentially expressed among both variables that can be considered sex-biased immune genes in this tortoise. Among experimental immune groups we find enriched GO biological processes for cysteine catabolism, regulation of type 1 interferon production, and regulation of cytokine production involved in immune response. Sex-biased transcription involves iron ion transport, iron ion homeostasis, and regulation of interferon-beta production to be enriched. More detailed work is needed to assess the seasonal response of the candidate genes found here. How seasonal fluctuation of testosterone and corticosterone modulate the immunosuppression of males and their susceptibility to&nbsp;</span><i>Mycoplasma</i><span>&nbsp;infection also warrants further investigation, as well as the importance of iron in the immune function and sex-biased differences of this species. Finally, future transcriptional studies should avoid drawing blood from tortoises via subcarapacial venipuncture as the variable aspiration of lymphatic fluid will confound the differential expression of genes.</span></p>","language":"English","publisher":"PLoS","doi":"10.1371/journal.pone.0238202","usgsCitation":"Xu, C., Dolby, G.A., Drake, K.K., Esque, T., and Kusumi, K., 2020, Immune and sex-biased gene expression in the threatened Mojave desert tortoise, Gopherus agassizii: PLoS ONE, v. 15, no. 8, e0238202, 26 p., https://doi.org/10.1371/journal.pone.0238202.","productDescription":"e0238202, 26 p.","ipdsId":"IP-120652","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":455519,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1371/journal.pone.0238202","text":"Publisher Index Page"},{"id":414542,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"15","issue":"8","noUsgsAuthors":false,"publicationDate":"2020-08-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Xu, Cindy","contributorId":303295,"corporation":false,"usgs":false,"family":"Xu","given":"Cindy","email":"","affiliations":[{"id":6607,"text":"Arizona State University","active":true,"usgs":false}],"preferred":false,"id":867047,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dolby, Greer A. 0000-0002-5923-0690","orcid":"https://orcid.org/0000-0002-5923-0690","contributorId":222726,"corporation":false,"usgs":false,"family":"Dolby","given":"Greer","email":"","middleInitial":"A.","affiliations":[{"id":6607,"text":"Arizona State University","active":true,"usgs":false}],"preferred":false,"id":867048,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Drake, K. Kristina 0000-0003-0711-7634 kdrake@usgs.gov","orcid":"https://orcid.org/0000-0003-0711-7634","contributorId":3799,"corporation":false,"usgs":true,"family":"Drake","given":"K.","email":"kdrake@usgs.gov","middleInitial":"Kristina","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":867049,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Esque, Todd 0000-0002-4166-6234 tesque@usgs.gov","orcid":"https://orcid.org/0000-0002-4166-6234","contributorId":195896,"corporation":false,"usgs":true,"family":"Esque","given":"Todd","email":"tesque@usgs.gov","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":867050,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kusumi, Kenro","contributorId":167536,"corporation":false,"usgs":false,"family":"Kusumi","given":"Kenro","email":"","affiliations":[],"preferred":false,"id":867051,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70212798,"text":"70212798 - 2020 - Distribution and transport of Olympia oyster, Ostrea lurida, larvae in northern Puget Sound, Washington, USA","interactions":[],"lastModifiedDate":"2020-08-28T13:12:46.044405","indexId":"70212798","displayToPublicDate":"2020-08-26T08:05:23","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2455,"text":"Journal of Shellfish Research","active":true,"publicationSubtype":{"id":10}},"title":"Distribution and transport of Olympia oyster, Ostrea lurida, larvae in northern Puget Sound, Washington, USA","docAbstract":"As efforts for restoring Olympia oyster (Ostrea lurida) populations have expanded, there is an increased need to understand local factors that could influence the long-term success of these projects. To address concerns over potential limitations to recruitment at a restoration site in northern Puget Sound, Washington, USA, a study was developed to characterize physical processes governing larval transport in conjunction with larval abundance and environmental factors. Larval presence was not associated with tide cycle, season, or a combination of tide cycle and season. In terms of location, larvae were more likely to be present at offshore and intertidal sites versus the estuarine lagoon where the adult population resides. Larval density was higher during late summer ebbs versus early summer floods. Across sampling dates and locations, larval sizes ranged from 184 to 263 µm, indicating that larvae were released into the water column throughout the reproductive season and retained in the embayment for at least ~16 days. Throughout different tidal cycles in Skagit Bay, acoustic Doppler current profilers were used to measure current direction and velocities, concurrent with plankton sampling. Surface currents in the study area alternated between a clockwise and counterclockwise gyre during initial ebb and flood tides, respectively. Larvae exported from the source population during initial to mid-ebbs are swept into a northward gyre, and potentially retained at intertidal sites alongshore. These results will provide resource managers attempting to restore native bivalves with the ability to expand populations by identifying optimal areas for habitat enhancement through natural recruitment.","language":"English","publisher":"BioOne","doi":"10.2983/035.039.0204","usgsCitation":"Grossman, S., Grossman, E.E., Barber, J.S., Gamblewood, S., and Crosby, S.C., 2020, Distribution and transport of Olympia oyster, Ostrea lurida, larvae in northern Puget Sound, Washington, USA: Journal of Shellfish Research, v. 39, no. 2, p. 215-233, https://doi.org/10.2983/035.039.0204.","productDescription":"19 p.","startPage":"215","endPage":"233","ipdsId":"IP-117290","costCenters":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":377979,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Washington","otherGeospatial":"Northern Puget Sound","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -126.002197265625,\n              46.9502622421856\n            ],\n            [\n              -121.97021484374999,\n              46.9502622421856\n            ],\n            [\n              -121.97021484374999,\n              49.224772722794825\n            ],\n            [\n              -126.002197265625,\n              49.224772722794825\n            ],\n            [\n              -126.002197265625,\n              46.9502622421856\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"39","issue":"2","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Grossman, S.K.","contributorId":239652,"corporation":false,"usgs":false,"family":"Grossman","given":"S.K.","email":"","affiliations":[{"id":47954,"text":"Swinomish Indian Tribal Community Fisheries Department","active":true,"usgs":false}],"preferred":false,"id":797487,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Grossman, Eric E. 0000-0003-0269-6307 egrossman@usgs.gov","orcid":"https://orcid.org/0000-0003-0269-6307","contributorId":196610,"corporation":false,"usgs":true,"family":"Grossman","given":"Eric","email":"egrossman@usgs.gov","middleInitial":"E.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true},{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":797488,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Barber, Julie S.","contributorId":239666,"corporation":false,"usgs":false,"family":"Barber","given":"Julie","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":797538,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Gamblewood, S.K.","contributorId":239654,"corporation":false,"usgs":false,"family":"Gamblewood","given":"S.K.","email":"","affiliations":[{"id":47954,"text":"Swinomish Indian Tribal Community Fisheries Department","active":true,"usgs":false}],"preferred":false,"id":797539,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Crosby, Sean C. 0000-0002-1499-6836","orcid":"https://orcid.org/0000-0002-1499-6836","contributorId":219466,"corporation":false,"usgs":false,"family":"Crosby","given":"Sean","email":"","middleInitial":"C.","affiliations":[{"id":40000,"text":"Contractor, USGS","active":true,"usgs":false}],"preferred":false,"id":797540,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70240189,"text":"70240189 - 2020 - Mineral deposits of the Mesoproterozoic Midcontinent Rift system in the Lake Superior region – A space and time classification","interactions":[],"lastModifiedDate":"2023-02-01T13:16:41.854536","indexId":"70240189","displayToPublicDate":"2020-08-26T07:13:01","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2954,"text":"Ore Geology Reviews","active":true,"publicationSubtype":{"id":10}},"title":"Mineral deposits of the Mesoproterozoic Midcontinent Rift system in the Lake Superior region – A space and time classification","docAbstract":"<p id=\"sp0015\">The Mesoproterozoic Midcontinent Rift System (MRS) of North America hosts a diverse suite of magmatic and hydrothermal mineral deposits in the Lake Superior region where rift rocks are exposed at or near the surface. Historically, hydrothermal deposits, such as Michigan’s native copper deposits and the White Pine sediment-hosted stratiform copper deposit, were major MRS metal producers. On-going exploration for and potential development of copper-nickel sulfide deposits hosted by the Duluth Complex of Minnesota and the opening of the Eagle nickel mine in Michigan indicate an expanding interest in MRS magmatic deposits. MRS hydrothermal and magmatic mineral deposits, many of which are significant past, present, and likely future providers of critical minerals, here are placed into a space and time metallogenic framework. To construct this framework, regional MRS mineral deposits extracted from the U.S. Geological Survey Mineral Resources Data System (MRDS) and the Ontario Ministry of Energy, Northern Development and Mines Mineral Deposit Inventory (MDI) were supplemented by other known and recently recognized mineral deposits described in the literature. All mineral deposits were classified by deposit type, host rock age and type, and estimated timing of mineralization. Deposits were then put into a tectonic evolutionary framework (stages) for the MRS, which shows that deposits formed within discrete spatial and temporal stages of rift evolution.</p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.oregeorev.2020.103716","usgsCitation":"Woodruff, L.G., Schulz, K.J., Nicholson, S.W., and Dicken, C.L., 2020, Mineral deposits of the Mesoproterozoic Midcontinent Rift system in the Lake Superior region – A space and time classification: Ore Geology Reviews, v. 126, 103716, 21 p., https://doi.org/10.1016/j.oregeorev.2020.103716.","productDescription":"103716, 21 p.","ipdsId":"IP-113870","costCenters":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":412532,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada, United States","otherGeospatial":"Lake Superior region","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -98.77134272564261,\n              38.8483191350162\n            ],\n            [\n              -83.3091592101386,\n              38.8483191350162\n            ],\n            [\n              -83.3091592101386,\n              49.57101080820971\n            ],\n            [\n              -98.77134272564261,\n              49.57101080820971\n            ],\n            [\n              -98.77134272564261,\n              38.8483191350162\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"126","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Woodruff, Laurel G. 0000-0002-2514-9923 woodruff@usgs.gov","orcid":"https://orcid.org/0000-0002-2514-9923","contributorId":2224,"corporation":false,"usgs":true,"family":"Woodruff","given":"Laurel","email":"woodruff@usgs.gov","middleInitial":"G.","affiliations":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":862907,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schulz, Klaus J. 0000-0003-2967-4765 kschulz@usgs.gov","orcid":"https://orcid.org/0000-0003-2967-4765","contributorId":2438,"corporation":false,"usgs":true,"family":"Schulz","given":"Klaus","email":"kschulz@usgs.gov","middleInitial":"J.","affiliations":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":862908,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Nicholson, Suzanne W. 0000-0002-9365-1894 swnich@usgs.gov","orcid":"https://orcid.org/0000-0002-9365-1894","contributorId":880,"corporation":false,"usgs":true,"family":"Nicholson","given":"Suzanne","email":"swnich@usgs.gov","middleInitial":"W.","affiliations":[],"preferred":true,"id":862910,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Dicken, Connie L. 0000-0002-1617-8132 cdicken@usgs.gov","orcid":"https://orcid.org/0000-0002-1617-8132","contributorId":57098,"corporation":false,"usgs":true,"family":"Dicken","given":"Connie","email":"cdicken@usgs.gov","middleInitial":"L.","affiliations":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":862909,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70212700,"text":"70212700 - 2020 - Developing post-alert messaging for ShakeAlert, the earthquake early warning system for the West Coast of the United States of America","interactions":[],"lastModifiedDate":"2020-08-26T12:10:02.436919","indexId":"70212700","displayToPublicDate":"2020-08-26T07:04:53","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2036,"text":"International Journal of Disaster Risk Reduction","active":true,"publicationSubtype":{"id":10}},"title":"Developing post-alert messaging for ShakeAlert, the earthquake early warning system for the West Coast of the United States of America","docAbstract":"<p><span>As ShakeAlert, the earthquake early warning system for the West Coast of the U.S., begins its transition to operational public alerting, we explore how post-alert messaging might represent system performance. Planned post-alert messaging can provide timely, crucial information to both emergency managers and ShakeAlert operators as well as calibrate expectations among various publics or public user groups and inform their responses to future alerts. There is a concern among the scientists and emergency managers that false alerts may negatively impact trust in the system, so quickly disseminated post-alert messages are necessary. For a new early warning system, such as ShakeAlert, this is particularly relevant given that the potentially affected population is likely to be unfamiliar with this system. We address this concern in six steps: (1) assessment of ShakeAlert performance to date, (2) characterization of human behavior and response to earthquake alerts, (3) presentation of a decision tree for issuing post-alert messages, (4) design of a critical set of post-alert messaging scenarios, (5) elaboration of these scenarios with message templates for a variety of communication channels, and (6) development of a typology of earthquake alerts. We further explore methods for monitoring and evaluating ShakeAlert post-alert messaging, for continuous improvement to the system.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.ijdrr.2020.101713","usgsCitation":"McBride, S., Bostrom, A., Sutton, J., deGroot, R.M., Baltay Sundstrom, A.S., Terbush, B., Bodin, P., Dixon, M., Holland, E., Arba, R., Laustsen, P.C., Liu, S., and Vinci, M.J., 2020, Developing post-alert messaging for ShakeAlert, the earthquake early warning system for the West Coast of the United States of America: International Journal of Disaster Risk Reduction, v. 50, 101713, 11 p., https://doi.org/10.1016/j.ijdrr.2020.101713.","productDescription":"101713, 11 p.","ipdsId":"IP-110997","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":455524,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.ijdrr.2020.101713","text":"Publisher Index Page"},{"id":377874,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California, Oregon, Washington, Idaho, Nevada, Utah, Arizona","otherGeospatial":"West Coast of United States","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.87109375,\n              48.980216985374994\n            ],\n            [\n              -126.12304687500001,\n              48.3416461723746\n            ],\n            [\n              -124.8046875,\n              38.13455657705411\n            ],\n            [\n              -118.47656249999999,\n              32.69486597787505\n            ],\n            [\n              -110.12695312499999,\n              31.50362930577303\n            ],\n            [\n              -108.6328125,\n              31.50362930577303\n            ],\n            [\n              -108.896484375,\n              41.244772343082076\n            ],\n            [\n              -110.91796875,\n              40.78054143186033\n            ],\n            [\n              -111.4453125,\n              44.715513732021336\n            ],\n            [\n              -114.60937499999999,\n              45.706179285330855\n            ],\n            [\n              -114.169921875,\n              46.31658418182218\n            ],\n            [\n              -116.27929687499999,\n              49.095452162534826\n            ],\n            [\n              -122.87109375,\n              48.980216985374994\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"50","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"McBride, Sara K. 0000-0002-8062-6542","orcid":"https://orcid.org/0000-0002-8062-6542","contributorId":206933,"corporation":false,"usgs":true,"family":"McBride","given":"Sara K.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true},{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"preferred":true,"id":797295,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bostrom, Ann 0000-0002-6399-3404","orcid":"https://orcid.org/0000-0002-6399-3404","contributorId":239575,"corporation":false,"usgs":false,"family":"Bostrom","given":"Ann","email":"","affiliations":[{"id":6934,"text":"University of Washington","active":true,"usgs":false}],"preferred":false,"id":797296,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sutton, Jeannette","contributorId":239576,"corporation":false,"usgs":false,"family":"Sutton","given":"Jeannette","email":"","affiliations":[{"id":12425,"text":"University of Kentucky","active":true,"usgs":false}],"preferred":false,"id":797297,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"deGroot, Robert Michael 0000-0001-9995-4207","orcid":"https://orcid.org/0000-0001-9995-4207","contributorId":239577,"corporation":false,"usgs":true,"family":"deGroot","given":"Robert","email":"","middleInitial":"Michael","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":797298,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Baltay Sundstrom, Annemarie S. 0000-0002-6514-852X abaltay@usgs.gov","orcid":"https://orcid.org/0000-0002-6514-852X","contributorId":4932,"corporation":false,"usgs":true,"family":"Baltay Sundstrom","given":"Annemarie","email":"abaltay@usgs.gov","middleInitial":"S.","affiliations":[{"id":234,"text":"Earthquake Hazards Program","active":true,"usgs":true},{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":797299,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Terbush, Brian","contributorId":239578,"corporation":false,"usgs":false,"family":"Terbush","given":"Brian","email":"","affiliations":[{"id":47925,"text":"Washington Emergency Management Department","active":true,"usgs":false}],"preferred":false,"id":797300,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Bodin, Paul","contributorId":206932,"corporation":false,"usgs":false,"family":"Bodin","given":"Paul","email":"","affiliations":[{"id":12729,"text":"UW","active":true,"usgs":false}],"preferred":false,"id":797301,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Dixon, Maximilian","contributorId":239579,"corporation":false,"usgs":false,"family":"Dixon","given":"Maximilian","email":"","affiliations":[{"id":47925,"text":"Washington Emergency Management Department","active":true,"usgs":false}],"preferred":false,"id":797302,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Holland, Emily","contributorId":239580,"corporation":false,"usgs":false,"family":"Holland","given":"Emily","email":"","affiliations":[{"id":28116,"text":"California Office of Emergency Services","active":true,"usgs":false}],"preferred":false,"id":797303,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Arba, Ryan","contributorId":239581,"corporation":false,"usgs":false,"family":"Arba","given":"Ryan","email":"","affiliations":[{"id":28116,"text":"California Office of Emergency Services","active":true,"usgs":false}],"preferred":false,"id":797304,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Laustsen, Paul C.","contributorId":239582,"corporation":false,"usgs":false,"family":"Laustsen","given":"Paul","email":"","middleInitial":"C.","affiliations":[{"id":5072,"text":"Office of Communication and Publishing","active":true,"usgs":true}],"preferred":false,"id":797305,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Liu, Sophia 0000-0002-8340-4945","orcid":"https://orcid.org/0000-0002-8340-4945","contributorId":239585,"corporation":false,"usgs":true,"family":"Liu","given":"Sophia","email":"","affiliations":[{"id":245,"text":"Eastern Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":797306,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Vinci, Margaret J.","contributorId":239589,"corporation":false,"usgs":false,"family":"Vinci","given":"Margaret","middleInitial":"J.","affiliations":[{"id":13711,"text":"Caltech","active":true,"usgs":false}],"preferred":false,"id":797307,"contributorType":{"id":1,"text":"Authors"},"rank":14}]}}
,{"id":70240330,"text":"70240330 - 2020 - Genetic and environmental indicators of climate change vulnerability for desert bighorn sheep","interactions":[],"lastModifiedDate":"2023-02-06T12:59:43.623009","indexId":"70240330","displayToPublicDate":"2020-08-26T06:53:55","publicationYear":"2020","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3910,"text":"Frontiers in Ecology and Evolution","onlineIssn":"2296-701X","active":true,"publicationSubtype":{"id":10}},"title":"Genetic and environmental indicators of climate change vulnerability for desert bighorn sheep","docAbstract":"<div class=\"JournalAbstract\"><p class=\"mb0\">Assessments of organisms’ vulnerability to potential climatic shifts are increasingly common. Such assessments are often conducted at the species level and focused primarily on the magnitude of anticipated climate change (i.e., climate exposure). However, wildlife management would benefit from population-level assessments that also incorporate measures of local or regional potential for organismal adaptation to change. Estimates of genetic diversity, gene flow, and landscape connectivity can address this need and complement climate exposure estimates to establish management priorities at broad to local scales. We provide an example of this holistic approach for desert bighorn sheep (<i>Ovis canadensis nelsoni</i>) within and surrounding lands administered by the U.S. National Park Service. We used genetic and environmental data from 62 populations across the southwestern U.S. to delineate genetic structure, evaluate relationships between genetic diversity and isolation, and estimate relative climate vulnerability for populations as a function of five variables associated with species’ responses to climate change: genetic diversity, genetic isolation, geographic isolation, forward climate velocity within a population’s habitat patch (a measure of geographic movement rate required for an organism to maintain constant climate conditions), and maximum elevation within the habitat patch (a measure of current climate stress, as lower maximum elevation is associated with higher temperature, lower precipitation, and lower population persistence). Genetic structure analyses revealed a high-level division between populations in southeastern Utah and populations in the remainder of the study area, which were further differentiated into four lower-level genetic clusters. Genetic diversity decreased with population isolation, whereas genetic differentiation increased, but these patterns were stronger for native populations than for translocated populations. Populations exhibited large variation in predicted vulnerability across the study area with respect to all variables, but native populations occupying relatively intact landscapes, such as Death Valley and Grand Canyon national parks, had the lowest overall vulnerability. These results provide local and regional context for conservation and management decisions regarding bighorn populations in a changing climate. Our study further demonstrates how assessments combining multiple factors could allow a more integrated response, such as increasing efforts to maintain connectivity and thus potential for adaptation in areas experiencing rapid climate change.</p></div>","language":"English","publisher":"Frontiers","doi":"10.3389/fevo.2020.00279","usgsCitation":"Creech, T.G., Epps, C.W., Wehausen, J.D., Crowhurst, R.S., Jaeger, J.R., Longshore, K., Holton, B., Sloan, W.B., and Monello, R.J., 2020, Genetic and environmental indicators of climate change vulnerability for desert bighorn sheep: Frontiers in Ecology and Evolution, v. 8, 279, 21 p., https://doi.org/10.3389/fevo.2020.00279.","productDescription":"279, 21 p.","ipdsId":"IP-114695","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":455527,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3389/fevo.2020.00279","text":"Publisher Index Page"},{"id":412728,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arizona, California, Nevada, Utah","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -117.79281227658007,\n              33.624412754810976\n            ],\n            [\n              -110.21546382082948,\n              33.624412754810976\n            ],\n            [\n              -110.21546382082948,\n              38.297241570941964\n            ],\n            [\n              -117.79281227658007,\n              38.297241570941964\n            ],\n            [\n              -117.79281227658007,\n              33.624412754810976\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"8","noUsgsAuthors":false,"publicationDate":"2020-08-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Creech, Tyler G.","contributorId":198152,"corporation":false,"usgs":false,"family":"Creech","given":"Tyler","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":863433,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Epps, Clinton W.","contributorId":198148,"corporation":false,"usgs":false,"family":"Epps","given":"Clinton","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":863434,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wehausen, John D.","contributorId":198149,"corporation":false,"usgs":false,"family":"Wehausen","given":"John","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":863435,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Crowhurst, Rachel S.","contributorId":198153,"corporation":false,"usgs":false,"family":"Crowhurst","given":"Rachel","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":863436,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Jaeger, Jef R.","contributorId":198154,"corporation":false,"usgs":false,"family":"Jaeger","given":"Jef","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":863437,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Longshore, Kathleen 0000-0001-6621-1271","orcid":"https://orcid.org/0000-0001-6621-1271","contributorId":216374,"corporation":false,"usgs":true,"family":"Longshore","given":"Kathleen","email":"","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":863438,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Holton, Brandon","contributorId":191915,"corporation":false,"usgs":false,"family":"Holton","given":"Brandon","affiliations":[],"preferred":false,"id":863439,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Sloan, William B.","contributorId":198150,"corporation":false,"usgs":false,"family":"Sloan","given":"William","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":863440,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Monello, Ryan J.","contributorId":217312,"corporation":false,"usgs":false,"family":"Monello","given":"Ryan","email":"","middleInitial":"J.","affiliations":[{"id":36245,"text":"NPS","active":true,"usgs":false}],"preferred":false,"id":863441,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70212472,"text":"sir20205065 - 2020 - Flood-frequency estimation for very low annual exceedance probabilities using historical, paleoflood, and regional information with consideration of nonstationarity","interactions":[],"lastModifiedDate":"2020-08-26T12:58:26.704616","indexId":"sir20205065","displayToPublicDate":"2020-08-25T14:37:00","publicationYear":"2020","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2020-5065","displayTitle":"Flood-Frequency Estimation for Very Low Annual Exceedance Probabilities Using Historical, Paleoflood, and Regional Information with Consideration of Nonstationarity","title":"Flood-frequency estimation for very low annual exceedance probabilities using historical, paleoflood, and regional information with consideration of nonstationarity","docAbstract":"<p>Streamflow estimates for floods with an annual exceedance probability of 0.001 or lower are needed to accurately portray risks to critical infrastructure, such as nuclear powerplants and large dams. However, extrapolating flood-frequency curves developed from at-site systematic streamflow records to very low annual exceedance probabilities (less than 0.001) results in large uncertainties in the streamflow estimates. Traditionally, methods for statistically estimating flood frequency have relied on the systematic streamflow record, which provides a time series of annual maximum flood peaks, often including some historical peaks. However, most peak-flow records are less than 100 years, and uncertainties are large when trying to extrapolate magnitudes of very low annual exceedance probability events.</p><p>Other data may be available that extend the record beyond the systematic dataset. Historical data are defined as data from outside the period of systematic records but within the period of human records. Examples of historical information include flood estimates from other agencies and newspaper accounts that can be translated to flood magnitude point estimates, interval estimates, or perception thresholds (such as a statement that an 1880 flood was the largest since 1869). Paleoflood data, which may also extend the dataset, include a broad range of information about flood occurrence or magnitude from sources like sediment deposits or tree rings.</p><p>Several assumptions are made in flood-frequency analysis, and an understanding of whether the data conform to these assumptions is desired. A particularly difficult assumption to evaluate for flood-frequency analysis is the underlying assumption that the flood series is stationary—the assumption that a time series of peak flow varies around a constant mean within a particular range of values (constant variance). As the hydrologic community’s understanding of natural systems and anthropogenic effects on streamflows has evolved, the community has come to understand that many surface-water systems exhibit one or more forms of nonstationarity, and thus the stationarity assumption is often violated to some degree. However, there is currently (2020) no consensus among hydrologists regarding the most appropriate flood-frequency-analysis methods for nonstationary systems, and this topic remains an active area of research.</p><p>A literature review was completed to summarize the state of the science of flood frequency. The literature review highlights tools available to detect nonstationarities and identifies approaches that include external information to inform flood-frequency analysis. To demonstrate methods for initial data analysis and for incorporating historical and paleoflood information in flood-frequency analysis, five sites were selected: the Red River of the North at James Avenue Pumping Station, Winnipeg, Manitoba, Canada; lower reach, Rapid Creek, South Dakota; Spring Creek, South Dakota; Cherry Creek near Melvin, Colorado; and Escalante River near Escalante, Utah. The sites were chosen for the availability of published historical and paleoflood data and for their geographic diversity and unique characteristics, which highlighted issues such as autocorrelation, change points, trends, outlier peaks, or short periods of record.</p><p>An initial data analysis that involved examining records for autocorrelation, change points, and trends was completed for all sites. The flood-frequency analysis completed for this study used version 7.2 of the U.S. Geological Survey PeakFQ program. Multiple analyses were done on each site documenting the change in the flood-frequency curve when additional historical or paleoflood data were added. When other flood-frequency studies were available, their results were compared to the results here. The comparisons in some cases simply show the effect of additional years of data, whereas other comparisons show results from probability distributions or fitting methods other than those used in PeakFQ.</p><p>For the Red River of the North, flood-frequency analysis shows that paleoflood data appear necessary to reasonably estimate very low annual exceedance probabilities. For the analysis of the lower reach of Rapid Creek and Spring Creek, paleoflood information helped put a high outlier from the systematic period in context; however, very low annual exceedance probabilities at these sites still had extraordinarily large confidence bounds. These sites also showed that paleoflood information might be transferred from one site to another, with the caveat that this is a case where we had existing paleoflood data to test the transfer of paleoflood information—this is not the case at many sites, and transferring paleoflood information requires assumptions about the comparability of floods at the sites. The Cherry Creek analysis affirmed the result of an earlier study that showed that the generalized Pareto distribution was not a good distribution for estimating very low annual exceedance probabilities. The Escalante River analysis showed that adding paleoflood information might increase uncertainty for very low annual exceedance probabilities, compared to analysis with the systematic period of record information only, when the paleoflood peaks are of much larger magnitudes than the systematic record.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20205065","collaboration":"Prepared in cooperation with the U.S. Nuclear Regulatory Commission","usgsCitation":"Ryberg, K.R., Kolars, K.A., Kiang, J.E., and Carr, M.L., 2020, Flood-frequency estimation for very low annual exceedance probabilities using historical, paleoflood, and regional information with consideration of nonstationarity: U.S. Geological Survey Scientific Investigations Report 2020–5065, 89 p., https://doi.org/10.3133/sir20205065.","productDescription":"Report: xii, 89 p.; 5 Tables; Appendix; Dataset","numberOfPages":"105","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-088812","costCenters":[{"id":37778,"text":"WMA - Integrated Modeling and Prediction Division","active":true,"usgs":true}],"links":[{"id":377559,"rank":8,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2020/5065/sir20205065_appendix.zip","text":"Appendix 1. Data, Settings, and Output for Each Site and Scenario","linkFileType":{"id":6,"text":"zip"},"description":"SIR 2020–5065 Appendix 1","linkHelpText":"— Each zipped file represents the analysis for a particular site and scenario"},{"id":377557,"rank":6,"type":{"id":27,"text":"Table"},"url":"https://pubs.usgs.gov/sir/2020/5065/sir20205065_table_7.pdf","text":"Table 7","size":"114 kB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020–5065 Table 7","linkHelpText":"— Streamflow estimates (fit) for selected annual exceedance probabilities and associated confidence intervals (lower and upper) and variance estimates for flood-frequency analysis under two different scenarios using U.S. Geological Survey PeakFQ software (Veilleux and others, 2014) version 7.2 for streamgage station 06712500 Cherry Creek near Melvin, Colorado, with comparisons to other distributions and fitting methods."},{"id":377553,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2020/5065/sir20205065.pdf","text":"Report","size":"5.16 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020–5065"},{"id":377554,"rank":3,"type":{"id":27,"text":"Table"},"url":"https://pubs.usgs.gov/sir/2020/5065/sir20205065_table_4.pdf","text":"Table 4","size":"139 kB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020–5065 Table 4","linkHelpText":"— Streamflow estimates (fit) for selected annual exceedance probabilities and associated confidence intervals (lower and upper) and variance estimates for flood-frequency analysis under 10 different scenarios using U.S. Geological Survey PeakFQ software (Veilleux and others, 2014) version 7.2 for streamgage station 05OJ015 Red River of the North at James Avenue Pumping Station, Winnipeg, Manitoba, Canada, as well as results from flood-frequency studies by Burn and Goel (2001) and Harden (1999)."},{"id":377697,"rank":9,"type":{"id":28,"text":"Dataset"},"url":"https://doi.org/10.5066/F7P55KJN","text":"U.S. Geological Survey National Water Information System database","description":"USGS Dataset","linkHelpText":"— USGS water data for the Nation"},{"id":377555,"rank":4,"type":{"id":27,"text":"Table"},"url":"https://pubs.usgs.gov/sir/2020/5065/sir20205065_table_5.pdf","text":"Table 5","size":"122 kB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020–5065 Table 5","linkHelpText":"— Streamflow estimates (fit) for selected annual exceedance probabilities and associated confidence intervals (lower and upper) and variance estimates for flood-frequency analysis under three different scenarios using U.S. Geological Survey PeakFQ software (Veilleux and others, 2014) version 7.2 for the lower reach of Rapid Creek, South Dakota, with comparisons to Harden and others (2011)."},{"id":377556,"rank":5,"type":{"id":27,"text":"Table"},"url":"https://pubs.usgs.gov/sir/2020/5065/sir20205065_table_6.pdf","text":"Table 6","size":"112 kB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020–5065 Table 6","linkHelpText":"— Streamflow estimates (fit) for selected annual exceedance probabilities and associated confidence intervals (lower and upper) and variance estimates for flood-frequency analysis under three different scenarios using U.S. Geological Survey PeakFQ software (Veilleux and others, 2014) version 7.2 for Spring Creek, South Dakota, with comparisons to Harden and others (2011)."},{"id":377552,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2020/5065/coverthb.jpg"},{"id":377558,"rank":7,"type":{"id":27,"text":"Table"},"url":"https://pubs.usgs.gov/sir/2020/5065/sir20205065_table_8.pdf","text":"Table 8","size":"116 kB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2020–5065 Table 8","linkHelpText":"— Streamflow estimates (fit) for selected annual exceedance probabilities and associated confidence intervals (lower and upper) and variance estimates for flood-frequency analysis under three different scenarios using U.S. Geological Survey PeakFQ software (Veilleux and others, 2014) version 7.2 for streamgage station 09337500 Escalante River near Escalante, Utah, with comparisons to Webb and others (1988), Webb and Rathburn (1988), and Kenney and others (2008)."}],"contact":"<p>Director, <a data-mce-href=\"https://www.usgs.gov/centers/dakota-water\" href=\"https://www.usgs.gov/centers/dakota-water\">Dakota Water Science Center</a><br>U.S. Geological Survey<br>821 East Interstate Avenue<br>Bismarck, ND 58503<br>1608 Mountain View Road<br>Rapid City, SD 57702<br></p>","tableOfContents":"<ul><li>Author Roles and Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Literature Review of Stationary and Nonstationary Flood-Frequency Analysis</li><li>Methods and Tools for Examining Peak-Flow Series Characteristics and Associated Statistical Assumptions</li><li>Sites Selected for Case Studies</li><li>Data and Methods Used for Case Studies</li><li>Flood-Frequency Analysis</li><li>Case Study Results and Discussion</li><li>Summary</li><li>References Cited</li><li>Appendix 1. Data, Settings, and Output for Each Site and Scenario</li></ul>","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"publishedDate":"2020-08-25","noUsgsAuthors":false,"publicationDate":"2020-08-25","publicationStatus":"PW","contributors":{"authors":[{"text":"Ryberg, Karen R. 0000-0002-9834-2046 kryberg@usgs.gov","orcid":"https://orcid.org/0000-0002-9834-2046","contributorId":1172,"corporation":false,"usgs":true,"family":"Ryberg","given":"Karen","email":"kryberg@usgs.gov","middleInitial":"R.","affiliations":[{"id":34685,"text":"Dakota Water Science Center","active":true,"usgs":true}],"preferred":true,"id":796398,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kolars, Kelsey A. 0000-0002-0540-3285 kkolars@usgs.gov","orcid":"https://orcid.org/0000-0002-0540-3285","contributorId":152116,"corporation":false,"usgs":true,"family":"Kolars","given":"Kelsey","email":"kkolars@usgs.gov","middleInitial":"A.","affiliations":[{"id":478,"text":"North Dakota Water Science Center","active":true,"usgs":true}],"preferred":false,"id":796399,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kiang, Julie E. 0000-0003-0653-4225 jkiang@usgs.gov","orcid":"https://orcid.org/0000-0003-0653-4225","contributorId":2179,"corporation":false,"usgs":true,"family":"Kiang","given":"Julie","email":"jkiang@usgs.gov","middleInitial":"E.","affiliations":[{"id":37778,"text":"WMA - Integrated Modeling and Prediction Division","active":true,"usgs":true},{"id":502,"text":"Office of Surface Water","active":true,"usgs":true}],"preferred":true,"id":796400,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Carr, Meredith L. 0000-0003-1970-8511","orcid":"https://orcid.org/0000-0003-1970-8511","contributorId":238712,"corporation":false,"usgs":false,"family":"Carr","given":"Meredith","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":796401,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
]}