{"pageNumber":"636","pageRowStart":"15875","pageSize":"25","recordCount":69037,"records":[{"id":70173522,"text":"70173522 - 2013 - Estimating transmission of avian influenza in wild birds from incomplete epizootic data: implications for surveillance and disease spreac","interactions":[],"lastModifiedDate":"2016-06-16T13:08:47","indexId":"70173522","displayToPublicDate":"2013-01-30T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2163,"text":"Journal of Applied Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Estimating transmission of avian influenza in wild birds from incomplete epizootic data: implications for surveillance and disease spreac","docAbstract":"<ol id=\"jpe12031-list-0001\" class=\"o-list--numbered o-list--paragraph\">\n<li>Estimating disease transmission in wildlife populations is critical to understand host&ndash;pathogen dynamics, predict disease risks and prioritize surveillance activities. However, obtaining reliable estimates for free-ranging populations is extremely challenging. In particular, disease surveillance programs may routinely miss the onset or end of epizootics and peak prevalence, limiting the ability to evaluate infectious processes.</li>\n<li>We used profile likelihood to estimate the force of infection (FOI) in a low pathogenic avian influenza virus (LPAIv) epizootic model from censored time series of LPAIv prevalence in hatch-year waterfowl (order Anseriformes) at postbreeding and migration sites in North America.</li>\n<li>We found a mean LPAIv FOI of 0&middot;12&nbsp;day<span>&minus;1</span>&nbsp;[95% CI, 0&middot;00&ndash;0&middot;39], corresponding to an incidence rate of 0&middot;11&nbsp;day<span>&minus;1</span>, with geographic heterogeneity (min&ndash;max: 0&middot;02&ndash;0&middot;23&nbsp;day<span>&minus;1</span>) among study sites. These high infection rates indicate that most hatch-year waterfowl are likely infected with LPAIv early in the fall migration.</li>\n<li>Comparison of model-predicted and observed immunity confirmed our assumption of na&iuml;ve hatch-year waterfowl and suggested long-term immunity (&gt;6&nbsp;months) for adults.</li>\n<li>Using the mean LPAIv incidence rate, we predict a shorter and lower epizootic curve for highly pathogenic avian influenza virus (HPAIv; 5&nbsp;weeks with peak prevalence of 28% and 30% mortality) than LPAIv (8&nbsp;weeks with peak prevalence of 50%). These findings indicate it is harder to detect HPAIv than LPAIv with swabs from live birds, which are commonly used during disease surveillance.</li>\n<li><i>Synthesis and applications</i>. Our study highlights the potential of integrating incomplete surveillance data with epizootic models to quantify disease transmission and immunity. This modelling approach provides an important tool to understand spatial and temporal epizootic dynamics and inform disease surveillance. Our findings suggest focusing highly pathogenic avian influenza virus (HPAIv) surveillance on postbreeding areas where mortality of immunologically na&iuml;ve hatch-year birds is most likely to occur, and collecting serology to enhance HPAIv detection. Our modelling approach can integrate various types of disease data facilitating its use with data from other surveillance programs (as illustrated by the estimation of infection rate during an HPAIv outbreak in mute swans<i>Cygnus olor</i>&nbsp;in Europe).</li>\n</ol>","language":"English","publisher":"British Ecological Society","doi":"10.1111/1365-2664.12031","usgsCitation":"Henaux, V., Jane Parmley, Catherine Soos, and Samuel, M.D., 2013, Estimating transmission of avian influenza in wild birds from incomplete epizootic data: implications for surveillance and disease spreac: Journal of Applied Ecology, v. 50, no. 1, p. 223-231, https://doi.org/10.1111/1365-2664.12031.","productDescription":"9 p.","startPage":"223","endPage":"231","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-031995","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":473969,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/1365-2664.12031","text":"Publisher Index Page"},{"id":323752,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada","volume":"50","issue":"1","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2013-01-30","publicationStatus":"PW","scienceBaseUri":"5763cdb4e4b07657d19ba76c","contributors":{"authors":[{"text":"Henaux, Viviane","contributorId":171388,"corporation":false,"usgs":false,"family":"Henaux","given":"Viviane","email":"","affiliations":[{"id":24576,"text":"University of Wisconsin, Madison, WI","active":true,"usgs":false}],"preferred":false,"id":637258,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jane Parmley","contributorId":171387,"corporation":false,"usgs":false,"family":"Jane Parmley","affiliations":[{"id":26882,"text":"University of Guelph, Canadian Cooperative Wildlife Heatlh Centr","active":true,"usgs":false}],"preferred":false,"id":637257,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Catherine Soos","contributorId":171386,"corporation":false,"usgs":false,"family":"Catherine Soos","affiliations":[{"id":6779,"text":"Environment Canada, Burlington, Ontario, Canada","active":true,"usgs":false}],"preferred":false,"id":637256,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Samuel, Michael D. msamuel@usgs.gov","contributorId":1419,"corporation":false,"usgs":true,"family":"Samuel","given":"Michael","email":"msamuel@usgs.gov","middleInitial":"D.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":637255,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70042960,"text":"ofr20131009 - 2013 - Water-quality and flow data, Chulitna River basin, Southwest Alaska, October 2009-June 2012","interactions":[],"lastModifiedDate":"2013-01-29T13:39:59","indexId":"ofr20131009","displayToPublicDate":"2013-01-29T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-1009","title":"Water-quality and flow data, Chulitna River basin, Southwest Alaska, October 2009-June 2012","docAbstract":"The Chulitna River basin in southwest Alaska drains an area of about 1,160 square miles, with the lower 158 square miles of the basin in Lake Clark National Park and Preserve. Water from this basin influences Lake Clark ecosystems that support salmon that, in part, sustain the Bristol Bay fishery. An area of about 391 square miles in the upper part of the Chulitna River basin has been staked for mining development (1,670 claims), and a proposed large scale copper-gold-molybdenum mine (Pebble Mine) lies adjacent to the Chulitna River drainage. The U.S. Geological Survey in cooperation with the National Park Service conducted a water-quality assessment of the Chulitna River from October 2009 to June 2012. Discrete water-quality samples and continuous-records of dissolved oxygen, pH, specific conductance, turbidity, water-stage, and water temperature data were collected from the Chulitna River. In addition, four miscellaneous sites were visited five times during 2010–12 to measure flow and water-quality parameters.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20131009","collaboration":"Prepared in cooperation with the National Park Service","usgsCitation":"Brabets, T.P., 2013, Water-quality and flow data, Chulitna River basin, Southwest Alaska, October 2009-June 2012: U.S. Geological Survey Open-File Report 2013-1009, vi, 30 p., https://doi.org/10.3133/ofr20131009.","productDescription":"vi, 30 p.","numberOfPages":"40","onlineOnly":"Y","additionalOnlineFiles":"N","costCenters":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"links":[{"id":266716,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2013/1009/pdf/ofr20131009.pdf"},{"id":266717,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ofr_2013_1009.jpg"},{"id":266715,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/of/2013/1009/"}],"scale":"63360","projection":"Albers Equal-Area Conic projection","country":"United States","state":"Alaska","otherGeospatial":"Chulitna River;Lake Clark National Park And Preserve","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -155.25,59.5 ], [ -155.25,61.5 ], [ -152.75,61.5 ], [ -152.75,59.5 ], [ -155.25,59.5 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5108ef78e4b0d965cd9f22d8","contributors":{"authors":[{"text":"Brabets, Timothy P. tbrabets@usgs.gov","contributorId":2087,"corporation":false,"usgs":true,"family":"Brabets","given":"Timothy","email":"tbrabets@usgs.gov","middleInitial":"P.","affiliations":[],"preferred":true,"id":472667,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70042913,"text":"sir20125243 - 2013 - Identifying nutrient reference sites in nutrient-enriched regions-Using algal, invertebrate, and fish-community measures to identify stressor-breakpoint thresholds in Indiana rivers and streams, 2005-9","interactions":[],"lastModifiedDate":"2013-01-29T08:38:59","indexId":"sir20125243","displayToPublicDate":"2013-01-29T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2012-5243","title":"Identifying nutrient reference sites in nutrient-enriched regions-Using algal, invertebrate, and fish-community measures to identify stressor-breakpoint thresholds in Indiana rivers and streams, 2005-9","docAbstract":"Excess nutrients in aquatic ecosystems can lead to shifts in species composition, reduced dissolved oxygen concentrations, fish kills, and toxic algal blooms. In this study, nutrients, periphyton chlorophyll a (CHLa), and invertebrate- and fishcommunity data collected during 2005-9 were analyzed from 318 sites on Indiana rivers and streams. The objective of this study was to determine which invertebrate and fish-taxa attributes best reflect the conditions of streams in Indiana along a gradient of nutrient concentrations by (1) determining statistically and ecologically significant relations among the stressor (total nitrogen, total phosphorus, and periphyton CHLa) and response (invertebrate and fish community) variables; and (2) determining the levels at which invertebrate- and fish-community measures change in response to nutrients or periphyton CHL<i>a</i>. For water samples at the headwater sites, total nitrogen (TN) concentrations ranged from 0.343 to 21.6 milligrams per liter (mg/L) (median 2.12 mg/L), total phosphorus (TP) concentrations ranged from 0.050 to 1.44 mg/L (median 0.093 mg/L), and periphyton CHL<i>a</i> ranged from 0.947 to 629 mg/L (median 69.7 mg/L). At the wadable sites, TN concentrations ranged from 0.340 to 10.0 mg/L (median 2.31 mg/L), TP concentrations ranged from 0.050 to 1.24 mg/L (median 0.110 mg/L), and periphyton CHLa ranged from 0.383 to 719 mg/L (median 44.7 mg/L). Recursive partitioning identified statistically significant low and high breakpoint thresholds on invertebrate and fish measures, which demonstrated the ecological response in enriched conditions. The combined community (invertebrate and fish) mean low and high TN breakpoint thresholds were 1.03 and 2.61 mg/L, respectively. The mean low and high breakpoint thresholds for TP were 0.083 and 0.144 mg/L, respectively. The mean low and high breakpoint thresholds for periphyton CHL<i>a</i> were 20.9 and 98.6 milligrams per square meter (mg/m<sup>2</sup>), respectively. Additive quantile regression analysis found similar thresholds (TN of 0.656 mg/L, mean TP of 0.118 mg/L, and periphyton CHLa of 27.2 mg/m<sup>2</sup>) for some stressor variables as determined by the breakpoint analysis. The TN and TP concentrations in this study showed a nutrient gradient that spanned three orders of magnitude. Sites were divided into Low, Medium, and High nutrient groups based on the 10th and 75th percentiles. The invertebrate and fish communities were similar along the nutrient gradient, using an analysis of similarity, demonstrating there was not a species trophic gradient. Within all nutrient groups, invertebrate and fish communities were dominated by nutrient tolerant taxa (algivores, herbivores, and omnivores) that included invertebrates, such as <i>Cheumatopsyche</i> sp., <i>Physella</i> sp., and fish such as Stonerollers (<i>Campostoma</i> spp.) and Bluntnose Minnow (<i>Pimephales notatus</i>). To determine if low nutrient concentrations at some sites were caused by algal uptake and not oligotrophic conditions, sites with low nutrient concentrations (less than 10th percentile for TN or TP) were examined based on the Low (less than or equal to the 10th percentile) and High (greater than the 75th percentile) periphyton CHL<i>a</i> concentrations. Within low nutrient sites, the invertebrate and fish communities were statistically different between Low and High periphyton CHL<i>a</i> categories. The majority of variance between the Low and High periphyton CHL<i>a</i> categories was caused by <i>Cheumatopsyche</i> sp. (caddisfly), <i>Physella</i> sp. (pulmonate snail), and <i>Caenis latipennis</i> (a mayfly) in the invertebrate community; and caused by Stonerollers, Western Blacknose Dace (<i>Rhinichthys atratulus meleagris</i>), and Creek Chub (<i>Semotilus atromaculatus</i>) in the fish community. The dominance of tolerant herbivore and omnivore taxa in the High periphyton CHL<i>a</i> group indicates that low nutrient concentrations are a result of nutrient uptake and increased algal growth. This study highlights the importance of assessing multiple lines of evidence when attempting to identify the trophic condition of a site.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20125243","collaboration":"Prepared in cooperation with the Indiana Department of Environmental Management, Office of Water Quality","usgsCitation":"Caskey, B.J., Bunch, A.R., Shoda, M.E., Frey, J.W., Selvaratnam, S., and Miltner, R.J., 2013, Identifying nutrient reference sites in nutrient-enriched regions-Using algal, invertebrate, and fish-community measures to identify stressor-breakpoint thresholds in Indiana rivers and streams, 2005-9: U.S. Geological Survey Scientific Investigations Report 2012-5243, Report: vii, 30 p.; Download Appendixes 1-11, https://doi.org/10.3133/sir20125243.","productDescription":"Report: vii, 30 p.; Download Appendixes 1-11","numberOfPages":"40","additionalOnlineFiles":"Y","costCenters":[{"id":346,"text":"Indiana Water Science Center","active":true,"usgs":true}],"links":[{"id":266652,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir_2012_5243.jpg"},{"id":266649,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2012/5243/"},{"id":266650,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2012/5243/pdf/sir2012-5243_web.pdf"},{"id":266651,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2012/5243/xls/SIR2012-5243_Appendixes_1-11_Final_Jan2013.xlsx"}],"country":"United States","state":"Indiana","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -88.0979,37.7717 ], [ -88.0979,41.7607 ], [ -84.7847,41.7607 ], [ -84.7847,37.7717 ], [ -88.0979,37.7717 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5108ef71e4b0d965cd9f22b8","contributors":{"authors":[{"text":"Caskey, Brian J.","contributorId":104119,"corporation":false,"usgs":true,"family":"Caskey","given":"Brian","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":472586,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bunch, Aubrey R. 0000-0002-2453-3624 aurbunch@usgs.gov","orcid":"https://orcid.org/0000-0002-2453-3624","contributorId":4351,"corporation":false,"usgs":true,"family":"Bunch","given":"Aubrey","email":"aurbunch@usgs.gov","middleInitial":"R.","affiliations":[{"id":346,"text":"Indiana Water Science Center","active":true,"usgs":true},{"id":27231,"text":"Indiana-Kentucky Water Science Center","active":true,"usgs":true},{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472582,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Shoda, Megan E. 0000-0002-5343-9717 meshoda@usgs.gov","orcid":"https://orcid.org/0000-0002-5343-9717","contributorId":4352,"corporation":false,"usgs":true,"family":"Shoda","given":"Megan","email":"meshoda@usgs.gov","middleInitial":"E.","affiliations":[{"id":27231,"text":"Indiana-Kentucky Water Science Center","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true},{"id":466,"text":"New England Water Science Center","active":true,"usgs":true},{"id":346,"text":"Indiana Water Science Center","active":true,"usgs":true},{"id":451,"text":"National Water Quality Assessment Program","active":true,"usgs":true}],"preferred":true,"id":472583,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Frey, Jeffrey W. 0000-0002-3453-5009 jwfrey@usgs.gov","orcid":"https://orcid.org/0000-0002-3453-5009","contributorId":487,"corporation":false,"usgs":true,"family":"Frey","given":"Jeffrey","email":"jwfrey@usgs.gov","middleInitial":"W.","affiliations":[{"id":346,"text":"Indiana Water Science Center","active":true,"usgs":true},{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true},{"id":27231,"text":"Indiana-Kentucky Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472581,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Selvaratnam, Shivi","contributorId":100968,"corporation":false,"usgs":true,"family":"Selvaratnam","given":"Shivi","email":"","affiliations":[],"preferred":false,"id":472585,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Miltner, Robert J.","contributorId":37227,"corporation":false,"usgs":true,"family":"Miltner","given":"Robert","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":472584,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70042985,"text":"ofr20131021 - 2013 - Groundwater quality in the Mohawk River Basin, New York, 2011","interactions":[],"lastModifiedDate":"2013-01-29T18:11:14","indexId":"ofr20131021","displayToPublicDate":"2013-01-29T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-1021","title":"Groundwater quality in the Mohawk River Basin, New York, 2011","docAbstract":"Water samples were collected from 21 production and domestic wells in the Mohawk River Basin in New York in July 2011 to characterize groundwater quality in the basin. The samples were collected and processed using standard U.S. Geological Survey procedures and were analyzed for 148 physiochemical properties and constituents, including dissolved gases, major ions, nutrients, trace elements, pesticides, volatile organic compounds (VOCs), radionuclides, and indicator bacteria. The Mohawk River Basin covers 3,500 square miles in New York and is underlain by shale, sandstone, carbonate, and crystalline bedrock. The bedrock is overlain by till in much of the basin, but surficial deposits of saturated sand and gravel are present in some areas. Nine of the wells sampled in the Mohawk River Basin are completed in sand and gravel deposits, and 12 are completed in bedrock. Groundwater in the Mohawk River Basin was typically neutral or slightly basic; the water typically was very hard. Bicarbonate, chloride, calcium, and sodium were the major ions with the greatest median concentrations; the dominant nutrient was nitrate. Methane was detected in 15 samples. Strontium, iron, barium, boron, and manganese were the trace elements with the highest median concentrations. Four pesticides, all herbicides or their degradates, were detected in four samples at trace levels; three VOCs, including chloroform and two solvents, were detected in four samples. The greatest radon-222 activity, 2,300 picocuries per liter, was measured in a sample from a bedrock well, but the median radon activity was higher in samples from sand and gravel wells than in samples from bedrock wells. Coliform bacteria were detected in five samples with a maximum of 92 colony-forming units per 100 milliliters. Water quality in the Mohawk River Basin is generally good, but concentrations of some constituents equaled or exceeded current or proposed Federal or New York State drinking-water standards. The standards exceeded are color (1 sample), pH (1 sample), sodium (9 samples), chloride (1 sample), sulfate (2 samples), dissolved solids (7 samples), aluminum (3 samples), iron (8 samples), manganese (6 samples), radon-222 (10 samples), and bacteria (5 samples). Fecal coliform bacteria and Escherichia coli (E. coli) were each detected in one sample. Concentrations of fluoride, nitrate, nitrite, antimony, arsenic, barium, beryllium, cadmium, chromium, copper, lead, mercury, selenium, silver, thallium, zinc, and uranium, and gross alpha activities, did not exceed existing drinking-water standards in any of the samples collected. Methane concentrations in two samples were greater than 28 milligrams per liter, and the maximum measured concentration was 44.3 milligrams per liter.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20131021","collaboration":"Prepared in cooperation with the New York State Department of Environmental Conservation","usgsCitation":"Nystrom, E.A., and Scott, T., 2013, Groundwater quality in the Mohawk River Basin, New York, 2011: U.S. Geological Survey Open-File Report 2013-1021, vi, 43 p., https://doi.org/10.3133/ofr20131021.","productDescription":"vi, 43 p.","startPage":"i","endPage":"43","numberOfPages":"52","onlineOnly":"Y","additionalOnlineFiles":"N","temporalStart":"2011-01-01","temporalEnd":"2011-12-31","costCenters":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"links":[{"id":266730,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/of/2013/1021/"},{"id":266732,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ofr_2013_1021.gif"},{"id":266731,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2013/1021/pdf/OFR2013-1021_nystrom_508.pdf"}],"country":"United States","state":"New York","otherGeospatial":"Mohawk River Basin","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -79.76,40.48 ], [ -79.76,45.02 ], [ -71.86,45.02 ], [ -71.86,40.48 ], [ -79.76,40.48 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5108ef6ee4b0d965cd9f22b0","contributors":{"authors":[{"text":"Nystrom, Elizabeth A. 0000-0002-0886-3439 nystrom@usgs.gov","orcid":"https://orcid.org/0000-0002-0886-3439","contributorId":1072,"corporation":false,"usgs":true,"family":"Nystrom","given":"Elizabeth","email":"nystrom@usgs.gov","middleInitial":"A.","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472738,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Scott, Tia-Marie 0000-0002-5677-0544 tia-mariescott@usgs.gov","orcid":"https://orcid.org/0000-0002-5677-0544","contributorId":5122,"corporation":false,"usgs":true,"family":"Scott","given":"Tia-Marie","email":"tia-mariescott@usgs.gov","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472739,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70042947,"text":"fs20133001 - 2013 - Understanding and managing the effects of groundwater pumping on streamflow","interactions":[],"lastModifiedDate":"2026-06-04T16:28:14.510848","indexId":"fs20133001","displayToPublicDate":"2013-01-29T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-3001","title":"Understanding and managing the effects of groundwater pumping on streamflow","docAbstract":"Groundwater is a critical resource in the United States because it provides drinking water, irrigates crops, supports industry, and is a source of water for rivers, streams, lakes, and springs. Wells that pump water out of aquifers can reduce the amount of groundwater that flows into rivers and streams, which can have detrimental impacts on aquatic ecosystems and the availability of surface water. Estimation of rates, locations, and timing of streamflow depletion due to groundwater pumping is needed for water-resource managers and users throughout the United States, but the complexity of groundwater and surface-water systems and their interactions presents a major challenge. The understanding of streamflow depletion and evaluation of water-management practices have improved during recent years through the use of computer models that simulate aquifer conditions and the effects of pumping groundwater on streams.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20133001","usgsCitation":"Leake, S.A., and Barlow, P.M., 2013, Understanding and managing the effects of groundwater pumping on streamflow: U.S. Geological Survey Fact Sheet 2013-3001, 4 p., https://doi.org/10.3133/fs20133001.","productDescription":"4 p.","additionalOnlineFiles":"N","costCenters":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"links":[{"id":505010,"rank":4,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_98108.htm","linkFileType":{"id":5,"text":"html"}},{"id":266696,"rank":1,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2013/3001/fs2013-3001.pdf"},{"id":266695,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/fs/2013/3001/"},{"id":266697,"rank":3,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/fs_2013_3001.gif"}],"country":"Mexico, United States","state":"Arizona, Sonora","otherGeospatial":"San Pedro River","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -110.75,30.9 ], [ -110.75,32.0 ], [ -109.75,32.0 ], [ -109.75,30.9 ], [ -110.75,30.9 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5108ef77e4b0d965cd9f22d4","contributors":{"authors":[{"text":"Leake, Stanley A. 0000-0003-3568-2542 saleake@usgs.gov","orcid":"https://orcid.org/0000-0003-3568-2542","contributorId":1846,"corporation":false,"usgs":true,"family":"Leake","given":"Stanley","email":"saleake@usgs.gov","middleInitial":"A.","affiliations":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472650,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Barlow, Paul M. 0000-0003-4247-6456 pbarlow@usgs.gov","orcid":"https://orcid.org/0000-0003-4247-6456","contributorId":1200,"corporation":false,"usgs":true,"family":"Barlow","given":"Paul","email":"pbarlow@usgs.gov","middleInitial":"M.","affiliations":[{"id":493,"text":"Office of Ground Water","active":true,"usgs":true}],"preferred":true,"id":472649,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70102982,"text":"70102982 - 2013 - Faulting and groundwater in a desert environment: constraining hydrogeology using time-domain electromagnetic data","interactions":[],"lastModifiedDate":"2014-04-28T13:15:16","indexId":"70102982","displayToPublicDate":"2013-01-28T13:10:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2850,"text":"Near Surface Geophysics","active":true,"publicationSubtype":{"id":10}},"title":"Faulting and groundwater in a desert environment: constraining hydrogeology using time-domain electromagnetic data","docAbstract":"Within the south-western Mojave Desert, the Joshua Basin Water District is considering applying imported water into infiltration ponds in the Joshua Tree groundwater sub-basin in an attempt to artificially recharge the underlying aquifer. Scarce subsurface hydrogeological data are available near the proposed recharge site; therefore, time-domain electromagnetic (TDEM) data were collected and analysed to characterize the subsurface. TDEM soundings were acquired to estimate the depth to water on either side of the Pinto Mountain Fault, a major east-west trending strike-slip fault that transects the proposed recharge site. While TDEM is a standard technique for groundwater investigations, special care must be taken when acquiring and interpreting TDEM data in a twodimensional (2D) faulted environment. A subset of the TDEM data consistent with a layered-earth interpretation was identified through a combination of three-dimensional (3D) forward modelling and diffusion time-distance estimates. Inverse modelling indicates an offset in water table elevation of nearly 40 m across the fault. These findings imply that the fault acts as a low-permeability barrier to groundwater flow in the vicinity of the proposed recharge site. Existing production wells on the south side of the fault, together with a thick unsaturated zone and permeable near-surface deposits, suggest the southern half of the study area is suitable for artificial recharge. These results illustrate the effectiveness of targeted TDEM in support of hydrological studies in a heavily faulted desert environment where data are scarce and the cost of obtaining these data by conventional drilling techniques is prohibitive.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Near Surface Geophysics","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"European Association of Geoscientists & Engineers","doi":"10.3997/1873-0604.2013043","usgsCitation":"Bedrosian, P.A., Burgess, M.K., and Nishikawa, T., 2013, Faulting and groundwater in a desert environment: constraining hydrogeology using time-domain electromagnetic data: Near Surface Geophysics, v. 11, no. 5, p. 545-555, https://doi.org/10.3997/1873-0604.2013043.","productDescription":"9 p.","startPage":"545","endPage":"555","ipdsId":"IP-011505","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":286725,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":286668,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.3997/1873-0604.2013043"}],"volume":"11","issue":"5","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"535f786de4b078dca33ae365","contributors":{"authors":[{"text":"Bedrosian, Paul A. 0000-0002-6786-1038 pbedrosian@usgs.gov","orcid":"https://orcid.org/0000-0002-6786-1038","contributorId":839,"corporation":false,"usgs":true,"family":"Bedrosian","given":"Paul","email":"pbedrosian@usgs.gov","middleInitial":"A.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true},{"id":312,"text":"Geology, Minerals, Energy, and Geophysics Science Center","active":true,"usgs":true}],"preferred":true,"id":493090,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Burgess, Matthew K. 0000-0002-2828-8910 mburgess@usgs.gov","orcid":"https://orcid.org/0000-0002-2828-8910","contributorId":2115,"corporation":false,"usgs":true,"family":"Burgess","given":"Matthew","email":"mburgess@usgs.gov","middleInitial":"K.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true},{"id":615,"text":"Volcano Hazards Program","active":true,"usgs":true}],"preferred":true,"id":493092,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Nishikawa, Tracy 0000-0002-7348-3838 tnish@usgs.gov","orcid":"https://orcid.org/0000-0002-7348-3838","contributorId":1515,"corporation":false,"usgs":true,"family":"Nishikawa","given":"Tracy","email":"tnish@usgs.gov","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":493091,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70175417,"text":"70175417 - 2013 - Long-term groundwater contamination after source removal—The role of sorbed carbon and nitrogen on the rate of reoxygenation of a treated-wastewater plume on Cape Cod, MA, USA","interactions":[],"lastModifiedDate":"2016-08-11T10:29:08","indexId":"70175417","displayToPublicDate":"2013-01-28T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1213,"text":"Chemical Geology","active":true,"publicationSubtype":{"id":10}},"title":"Long-term groundwater contamination after source removal—The role of sorbed carbon and nitrogen on the rate of reoxygenation of a treated-wastewater plume on Cape Cod, MA, USA","docAbstract":"<p>The consequences of groundwater contamination can remain long after a contaminant source has been removed. Documentation of natural aquifer recoveries and empirical tools to predict recovery time frames and associated geochemical changes are generally lacking. This study characterized the long-term natural attenuation of a groundwater contaminant plume in a sand and gravel aquifer on Cape Cod, Massachusetts, after the removal of the treated-wastewater source. Although concentrations of dissolved organic carbon (DOC) and other soluble constituents have decreased substantially in the 15 years since the source was removed, the core of the plume remains anoxic and has sharp redox gradients and elevated concentrations of nitrate and ammonium. Aquifer sediment was collected from near the former disposal site at several points in time and space along a 0.5-km-long transect extending downgradient from the disposal site and analyses of the sediment was correlated with changes in plume composition. Total sediment carbon content was generally low (&lt; 8 to 55.8 &mu;mol (g dry wt)&minus; 1) but was positively correlated with oxygen consumption rates in laboratory incubations, which ranged from 11.6 to 44.7 nmol (g dry wt)&minus; 1 day&minus; 1. Total water extractable organic carbon was &lt; 10&ndash;50% of the total carbon content but was the most biodegradable portion of the carbon pool. Carbon/nitrogen (C/N) ratios in the extracts increased more than 10-fold with time, suggesting that organic carbon degradation and oxygen consumption could become N-limited as the sorbed C and dissolved inorganic nitrogen (DIN) pools produced by the degradation separate with time by differential transport. A 1-D model using total degradable organic carbon values was constructed to simulate oxygen consumption and transport and calibrated by using observed temporal changes in oxygen concentrations at selected wells. The simulated travel velocity of the oxygen gradient was 5&ndash;13% of the groundwater velocity. This suggests that the total sorbed carbon pool is large relative to the rate of oxygen entrainment and will be impacting groundwater geochemistry for many decades. This has implications for long-term oxidation of reduced constituents, such as ammonium, that are being transported downgradient away from the infiltration beds toward surface and coastal discharge zones.</p>","language":"English","publisher":"Elsevier","publisherLocation":"New York, NY","doi":"10.1016/j.chemgeo.2012.11.007","usgsCitation":"Smith, R.L., Repert, D.A., Barber, L.B., and LeBlanc, D.R., 2013, Long-term groundwater contamination after source removal—The role of sorbed carbon and nitrogen on the rate of reoxygenation of a treated-wastewater plume on Cape Cod, MA, USA: Chemical Geology, v. 337-338, p. 38-47, https://doi.org/10.1016/j.chemgeo.2012.11.007.","productDescription":"10 p.","startPage":"38","endPage":"47","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-038423","costCenters":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"links":[{"id":326394,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Massachusetts","otherGeospatial":"Cape Cod","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -70.33447265624999,\n              41.59490508367679\n            ],\n            [\n              -70.33447265624999,\n              42.10229818948117\n            ],\n            [\n              -69.8455810546875,\n              42.10229818948117\n            ],\n            [\n              -69.8455810546875,\n              41.59490508367679\n            ],\n            [\n              -70.33447265624999,\n              41.59490508367679\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"337-338","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57ada1e5e4b0f412a62dfaa7","contributors":{"authors":[{"text":"Smith, Richard L. 0000-0002-3829-0125 rlsmith@usgs.gov","orcid":"https://orcid.org/0000-0002-3829-0125","contributorId":1592,"corporation":false,"usgs":true,"family":"Smith","given":"Richard","email":"rlsmith@usgs.gov","middleInitial":"L.","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":38175,"text":"Toxics Substances Hydrology Program","active":true,"usgs":true},{"id":36183,"text":"Hydro-Ecological Interactions Branch","active":true,"usgs":true}],"preferred":true,"id":645123,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Repert, Deborah A. 0000-0001-7284-1456 darepert@usgs.gov","orcid":"https://orcid.org/0000-0001-7284-1456","contributorId":2578,"corporation":false,"usgs":true,"family":"Repert","given":"Deborah","email":"darepert@usgs.gov","middleInitial":"A.","affiliations":[{"id":36183,"text":"Hydro-Ecological Interactions Branch","active":true,"usgs":true},{"id":37464,"text":"WMA - Laboratory & Analytical Services Division","active":true,"usgs":true},{"id":38175,"text":"Toxics Substances Hydrology Program","active":true,"usgs":true},{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":645120,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Barber, Larry B. 0000-0002-0561-0831 lbbarber@usgs.gov","orcid":"https://orcid.org/0000-0002-0561-0831","contributorId":921,"corporation":false,"usgs":true,"family":"Barber","given":"Larry","email":"lbbarber@usgs.gov","middleInitial":"B.","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true},{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":645122,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"LeBlanc, Denis R. 0000-0002-4646-2628 dleblanc@usgs.gov","orcid":"https://orcid.org/0000-0002-4646-2628","contributorId":1696,"corporation":false,"usgs":true,"family":"LeBlanc","given":"Denis","email":"dleblanc@usgs.gov","middleInitial":"R.","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":645121,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70042894,"text":"sir20125226 - 2013 - Determination of flow losses in the Cape Fear River between B. Everett Jordan Lake and Lillington, North Carolina, 2008-2010","interactions":[],"lastModifiedDate":"2013-01-28T20:02:17","indexId":"sir20125226","displayToPublicDate":"2013-01-28T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2012-5226","title":"Determination of flow losses in the Cape Fear River between B. Everett Jordan Lake and Lillington, North Carolina, 2008-2010","docAbstract":"During 2008-2010, the U.S. Geological Survey conducted a hydrologic investigation in cooperation with the Triangle J Council of Governments Cape Fear River Flow Study Committee and the North Carolina Division of Water Resources to collect hydrologic data in the Cape Fear River between B. Everett Jordan Lake and Lillington in central North Carolina to help determine if suspected flow losses occur in the reach. Flow loss analyses were completed by summing the daily flow releases at Jordan Lake Dam with the daily discharges at Deep River at Moncure and Buckhorn Creek near Corinth, then subtracting these values from the daily discharges at Cape Fear River at Lillington. Examination of long-term records revealed that during 10,227 days of the 1983-2010 water years, 408 days (4.0 percent) had flow loss when conditions were relatively steady with respect to the previous day's records. The flow loss that occurred on these 40 days ranged from 0.49 to 2,150 cubic feet per second with a median flow loss of 37.2 cubic feet per second. The months with the highest number of days with flow losses were June (16. percent), September (16.9 percent), and October (19.4 percent). A series of synoptic discharge measurements made on six separate days in 2009 provided \"snapshots\" of overall flow conditions along the study reach. The largest water diversion is just downstream from the confluence of the Haw and Deep Rivers, and discharges substantially decrease in the main stem downstream from the intake point. Downstream from Buckhorn Dam, minimal gain or loss between the dam and Raven Rock State Park was noted. Analyses of discharge measurements and ratings for two streamgages-one at Deep River at Moncure and the other at Cape Fear River at Lillington-were completed to address the accuracy of the relation between stage and discharge at these sites. The ratings analyses did not indicate a particular time during the 1982-2011 water years in which a consistent bias occurred in the computations of discharge records that would indicate false flow losses. A total of 34 measured discharges at a streamgage on the Haw River below B. Everett Jordan Lake near Moncure were compared with the reported hourly flow releases from Jordan Lake Dam. Because 28 of 34 measurements were within plus or minus 10 percent of the hourly flow releases reported by the U.S Army Corps of Engineers, use of the current discharge computation tables for reporting Jordan Lake Dam flow releases is generally supported. A stage gage was operated on the Cape Fear River at Buckhorn Dam near Corinth to collect continuous stage-only records. Throughout the study period, flow over the dam was observed along its length, and flow loss within the study reach is not attributed to river-level fluctuations at the dam. Water-use information and (or) data were obtained for five industrial facilities, a regional power utility, two municipalities, one small hydropower facility on the Deep River, and one quarry operation also adjacent to the Deep River. The largest water users are the regional power producer, a small hydropower operation, and the two municipalities. The total water-use diversions for these facilities range from almost 25.5 to 38.5 cubic feet per second (39.5 to 59.5 million gallons per day) during the winter and summer periods, respectively. This range is equivalent to 69 to 104 percent of the 37 cubic feet per second median flow loss. The Lockville hydropower station is on the Deep River about 1 mile downstream from the streamgage near Moncure. Run-of-river operations at the facility do not appear to affect flow losses in the study reach. The largest water user in the study area is a regional power producer at a coal-fired power-generation plant located immediately adjacent to the Cape Fear River just downstream from the confluence of the Haw an Deep Rivers. Comparisons of daily water withdrawals, sup-plied by the regional power producer, and discharge records at a streamgage on the diversion canal indicated many days when consumption exceeded the producer's estimates for the cooling towers. Uncertainty surrounding reasonable estimates of consumption remained in effect at the end of the study.  Data concerning evaporative losses were compiled using two approaches-an analysis of available pan-evaporation data from a National Weather Service cooperative observer station in Chapel Hill, North Carolina; and a compilation of reference open-water evaporation computed by the State Climate Office of North Carolina. The potential flow loss by evaporation from the main stem and the Deep River was estimated to be in the range of 4 to 14 cubic feet per second during May through October, equivalent to 10 to 38 percent of the 37 cubic feet per second median flow loss. Daily water-use diversions and evaporation losses were compared to flow-loss occurrences during the period April 2008 through September 2010. In comparing the surface-water, water-use, and evaporation data compiled for 2008-2010, it is evident that documented water diversions combined with flow losses by open-water evaporation can exceed the net flow gain in the study area and result in flow losses from the reach. Analysis of data from a streamgage downstream from the regional power plant on the diversion canal adjacent to the Cape Fear River provided insight into the occurrence of an apparent flow loss at the streamgage at Lillington. Assessment of the daily discharges and subsequent hydrographs for the canal streamgage indicated at least 24 instances during the study when the flows suddenly changed by magnitudes of 100 to more that 200 cubic feet per second, resulting in a noted time-lag effect on the downstream discharges at the Lillington streamgage, beginning 8 to 16 hours after the sudden flow change. A fiber-optic distributed temperature-sensing survey was conducted on the Cape Fear River at the Raven Rock State Park reach August 12-14, 2009, to determine if the presence of diabase dikes were preferentially directing groundwater discharge. No temperature anomalies of colder water were measured during the survey, which indicated that at the time of the survey that particular reach of the Cape Fear River was a \"no-flow\" or losing stream. An aerial thermal-infrared survey was conducted on the Haw and Cape Fear Rivers on February 27, 2010, from Jordan Lake Dam to Lillington to qualitatively delineate areas of groundwater discharge on the basis of the contrast between warm groundwater discharge and cold surface-water temperatures. Dis-charge generally was noted as diffuse seepage, but in a few cases springs were detected as inflow at a discrete point of discharge. Two reaches of the Cape Fear River (regional power plant and Bradley Road reaches) were selected for groundwater monitoring with a transect of piezometers installed within the flood plain. Groundwater-level altitudes at these reaches were analyzed for 1 water year (October 1, 2009, to September 30, 2010). Data collected as part of this study represent only a brief period of time and may not represent all conditions and all years; however, the data indicate that, during the dry summer months, the Cape Fear River within the study area is losing an undetermined quantity of water through seepage. Analyses completed during this investigation indicate a study reach with complex flow patterns affected by numerous concurrent factors resulting in flow losses. The causes of flow loss could not be solely attributed to any one factor. Among the factors considered, the occurrences of water diversions and evaporative losses were determined to be sufficient on some days (particularly during the base-flow period) to exceed the net gain in flows between the upstream and downstream ends of the study area. Losses by diversions and evaporation can exceed the median flow loss of 3 cubic feet per second, which indicates that flow loss from the study reach is real. Groundwater data collected during 2009-2010 indicate the possibility of localized flow loss during the summer, particularly in the impounded reach above Buckhorn Dam. However, no indication of unusual patterns was noted that would cause substantial flow loss by groundwater and surface-water interaction at the river bottom.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20125226","collaboration":"Prepared in cooperation with the Triangle J Council of Governments Cape Fear River Flow Study Committee and the North Carolina Department of Environment and Natural Resources, Division of Water Resources","usgsCitation":"Weaver, J., and McSwain, K., 2013, Determination of flow losses in the Cape Fear River between B. Everett Jordan Lake and Lillington, North Carolina, 2008-2010: U.S. Geological Survey Scientific Investigations Report 2012-5226, x, 76 p., https://doi.org/10.3133/sir20125226.","productDescription":"x, 76 p.","numberOfPages":"90","onlineOnly":"Y","temporalStart":"2008-01-01","temporalEnd":"2010-12-31","costCenters":[{"id":476,"text":"North Carolina Water Science Center","active":true,"usgs":true}],"links":[{"id":266624,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir_2012_5226.gif"},{"id":266620,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2012/5226/"},{"id":266621,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2012/5226/pdf/sir2012-5226_v3.pdf"}],"scale":"100000","country":"United States","state":"North Carolina","city":"Lillington","otherGeospatial":"B. Everett Jordan Lake;Cape Fear River;Shearon Harris Lake","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -79.161987,35.417314 ], [ -79.161987,35.612372 ], [ -78.798752,35.612372 ], [ -78.798752,35.417314 ], [ -79.161987,35.417314 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51079deae4b0df796f216e0c","contributors":{"authors":[{"text":"Weaver, J. Curtis","contributorId":42260,"corporation":false,"usgs":true,"family":"Weaver","given":"J. Curtis","affiliations":[],"preferred":false,"id":472522,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"McSwain, Kristen Bukowski","contributorId":104458,"corporation":false,"usgs":true,"family":"McSwain","given":"Kristen Bukowski","affiliations":[],"preferred":false,"id":472523,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70042845,"text":"70042845 - 2013 - Hydrogeomorphology influences soil nitrogen and phosphorus mineralization in floodplain wetlands","interactions":[],"lastModifiedDate":"2013-01-25T14:01:30","indexId":"70042845","displayToPublicDate":"2013-01-25T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1478,"text":"Ecosystems","active":true,"publicationSubtype":{"id":10}},"title":"Hydrogeomorphology influences soil nitrogen and phosphorus mineralization in floodplain wetlands","docAbstract":"Conceptual models of river–floodplain systems and biogeochemical theory predict that floodplain soil nitrogen (N) and phosphorus (P) mineralization should increase with hydrologic connectivity to the river and thus increase with distance downstream (longitudinal dimension) and in lower geomorphic units within the floodplain (lateral dimension). We measured rates of in situ soil net ammonification, nitrification, N, and P mineralization using monthly incubations of modified resin cores for a year in the forested floodplain wetlands of Difficult Run, a fifth order urban Piedmont river in Virginia, USA. Mineralization rates were then related to potentially controlling ecosystem attributes associated with hydrologic connectivity, soil characteristics, and vegetative inputs. Ammonification and P mineralization were greatest in the wet backswamps, nitrification was greatest in the dry levees, and net N mineralization was greatest in the intermediately wet toe-slopes. Nitrification also was greater in the headwater sites than downstream sites, whereas ammonification was greater in downstream sites. Annual net N mineralization increased with spatial gradients of greater ammonium loading to the soil surface associated with flooding, soil organic and nutrient content, and herbaceous nutrient inputs. Annual net P mineralization was associated negatively with soil pH and coarser soil texture, and positively with ammonium and phosphate loading to the soil surface associated with flooding. Within an intensively sampled low elevation flowpath at one site, sediment deposition during individual incubations stimulated mineralization of N and P. However, the amount of N and P mineralized in soil was substantially less than the amount deposited with sedimentation. In summary, greater inputs of nutrients and water and storage of soil nutrients along gradients of river–floodplain hydrologic connectivity increased floodplain soil nutrient mineralization rates.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Ecosystems","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Springer","publisherLocation":"Amsterdam, Netherlands","doi":"10.1007/s10021-012-9597-0","issn":"1432-9840","usgsCitation":"Noe, G., Hupp, C.R., and Rybicki, N.B., 2013, Hydrogeomorphology influences soil nitrogen and phosphorus mineralization in floodplain wetlands: Ecosystems, v. 16, no. 1, p. 75-94, https://doi.org/10.1007/s10021-012-9597-0.","productDescription":"20 p.","startPage":"75","endPage":"94","ipdsId":"IP-030280","costCenters":[{"id":146,"text":"Branch of Regional Research-Eastern Region","active":false,"usgs":true}],"links":[{"id":266450,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1007/s10021-012-9597-0"},{"id":266455,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":266488,"type":{"id":15,"text":"Index Page"},"url":"https://link.springer.com/article/10.1007%2Fs10021-012-9597-0"}],"country":"United States","state":"Maryl;Virginia","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -78.2,38.6 ], [ -78.2,39.7 ], [ -76.3,39.7 ], [ -76.3,38.6 ], [ -78.2,38.6 ] ] ] } } ] }","volume":"16","issue":"1","noUsgsAuthors":false,"publicationDate":"2012-09-25","publicationStatus":"PW","scienceBaseUri":"5103a960e4b0ce88de6409b3","contributors":{"authors":[{"text":"Noe, Gregory B.","contributorId":77805,"corporation":false,"usgs":true,"family":"Noe","given":"Gregory B.","affiliations":[],"preferred":false,"id":472378,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hupp, Cliff R. 0000-0003-1853-9197 crhupp@usgs.gov","orcid":"https://orcid.org/0000-0003-1853-9197","contributorId":2344,"corporation":false,"usgs":true,"family":"Hupp","given":"Cliff","email":"crhupp@usgs.gov","middleInitial":"R.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":472377,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rybicki, Nancy B. 0000-0002-2205-7927 nrybicki@usgs.gov","orcid":"https://orcid.org/0000-0002-2205-7927","contributorId":2142,"corporation":false,"usgs":true,"family":"Rybicki","given":"Nancy","email":"nrybicki@usgs.gov","middleInitial":"B.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":472376,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70042809,"text":"70042809 - 2013 - Prediction, time variance, and classification of hydraulic response to recharge in two karst aquifers","interactions":[],"lastModifiedDate":"2017-10-14T11:21:43","indexId":"70042809","displayToPublicDate":"2013-01-25T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1928,"text":"Hydrology and Earth System Sciences","active":true,"publicationSubtype":{"id":10}},"title":"Prediction, time variance, and classification of hydraulic response to recharge in two karst aquifers","docAbstract":"Many karst aquifers are rapidly filled and depleted and therefore are likely to be susceptible to changes in short-term climate variability. Here we explore methods that could be applied to model site-specific hydraulic responses, with the intent of simulating these responses to different climate scenarios from high-resolution climate models. We compare hydraulic responses (spring flow, groundwater level, stream base flow, and cave drip) at several sites in two karst aquifers: the Edwards aquifer (Texas, USA) and the Madison aquifer (South Dakota, USA). A lumped-parameter model simulates nonlinear soil moisture changes for estimation of recharge, and a time-variant convolution model simulates the aquifer response to this recharge. Model fit to data is 2.4% better for calibration periods than for validation periods according to the Nash–Sutcliffe coefficient of efficiency, which ranges from 0.53 to 0.94 for validation periods. We use metrics that describe the shapes of the impulse-response functions (IRFs) obtained from convolution modeling to make comparisons in the distribution of response times among sites and between aquifers. Time-variant IRFs were applied to 62% of the sites. Principal component analysis (PCA) of metrics describing the shapes of the IRFs indicates three principal components that together account for 84% of the variability in IRF shape: the first is related to IRF skewness and temporal spread and accounts for 51% of the variability; the second and third largely are related to time-variant properties and together account for 33% of the variability. Sites with IRFs that dominantly comprise exponential curves are separated geographically from those dominantly comprising lognormal curves in both aquifers as a result of spatial heterogeneity. The use of multiple IRF metrics in PCA is a novel method to characterize, compare, and classify the way in which different sites and aquifers respond to recharge. As convolution models are developed for additional aquifers, they could contribute to an IRF database and a general classification system for karst aquifers.","language":"English","publisher":"European Geosciences Union","publisherLocation":"Munich, Germany","doi":"10.5194/hess-17-281-2013","usgsCitation":"Long, A.J., and Mahler, B., 2013, Prediction, time variance, and classification of hydraulic response to recharge in two karst aquifers: Hydrology and Earth System Sciences, v. 17, p. 281-294, https://doi.org/10.5194/hess-17-281-2013.","productDescription":"14 p.","startPage":"281","endPage":"294","additionalOnlineFiles":"Y","ipdsId":"IP-039376","costCenters":[{"id":562,"text":"South Dakota Water Science Center","active":true,"usgs":true},{"id":34685,"text":"Dakota Water Science Center","active":true,"usgs":true}],"links":[{"id":473970,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.5194/hess-17-281-2013","text":"Publisher Index Page"},{"id":266470,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":266476,"type":{"id":7,"text":"Companion Files"},"url":"https://www.hydrol-earth-syst-sci-discuss.net/9/9577/2012/hessd-9-9577-2012.html"},{"id":266473,"type":{"id":7,"text":"Companion Files"},"url":"https://www.hydrol-earth-syst-sci.net/17/281/2013/hess-17-281-2013-supplement.zip"}],"country":"United States","state":"South Dakota, Texas","otherGeospatial":"Edwards Aquifer, Madison Aquifer","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -104.5,28.9 ], [ -104.5,44.5 ], [ -97.25,44.5 ], [ -97.25,28.9 ], [ -104.5,28.9 ] ] ] } } ] }","volume":"17","noUsgsAuthors":false,"publicationDate":"2013-01-24","publicationStatus":"PW","scienceBaseUri":"5103a968e4b0ce88de6409b7","contributors":{"authors":[{"text":"Long, Andrew J. 0000-0001-7385-8081 ajlong@usgs.gov","orcid":"https://orcid.org/0000-0001-7385-8081","contributorId":989,"corporation":false,"usgs":true,"family":"Long","given":"Andrew","email":"ajlong@usgs.gov","middleInitial":"J.","affiliations":[{"id":622,"text":"Washington Water Science Center","active":true,"usgs":true},{"id":562,"text":"South Dakota Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472317,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mahler, Barbara 0000-0002-9150-9552 bjmahler@usgs.gov","orcid":"https://orcid.org/0000-0002-9150-9552","contributorId":1249,"corporation":false,"usgs":true,"family":"Mahler","given":"Barbara","email":"bjmahler@usgs.gov","affiliations":[{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":472318,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70042848,"text":"70042848 - 2013 - Molecular techniques to distinguish morphologically similar <i>Hydrilla verticillata</i>, <i>Egeria densa</i>, <i>Elodea nuttallii</i>, and <i>Elodea canadensis</i>","interactions":[],"lastModifiedDate":"2016-06-28T17:01:07","indexId":"70042848","displayToPublicDate":"2013-01-25T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2180,"text":"Journal of Aquatic Plant Management","active":true,"publicationSubtype":{"id":10}},"title":"Molecular techniques to distinguish morphologically similar <i>Hydrilla verticillata</i>, <i>Egeria densa</i>, <i>Elodea nuttallii</i>, and <i>Elodea canadensis</i>","docAbstract":"<p>The four submerged aquatic species, hydrilla (Hydrilla verticillata [monoecious and dioecious]), Brazilian waterweed (Egeria densa), Canadian waterweed (Elodea canadensis), and western waterweed (Elodea nuttallii), are difficult to positively identify because of their morphological similarity to each other, resulting in possible misidentification. This limits our ability to understand their past and present distribution, which is important in aquatic plant management. We investigated a molecular technique to identify these species, which are problematic because of their invasive nature on multiple continents. Approximately 100 samples of these species, ranging in age from 40-yr-old herbarium samples to recently collected plants, were collected from regions across the United States. The distribution and range of the samples collected in this research were compared to those reported in the literature. We confirmed information on the current wide distribution of both hydrilla biotypes in the United States and discovered that hydrilla had actually invaded the waterways near Washington, DC 6 yr earlier than originally reported. In addition, we found evidence of the confusion, dating back to the 1980s, between Canadian waterweed and western waterweed in the mid-Atlantic region of the United States. Canadian waterweed was previously reported as common and western waterweed as rare; however, our samples indicate the opposite is true. This information indicates there is a need for investigators to anticipate the spread of hydrilla populations to northern U.S. waterways, where it will compete with existing plant species, including Canadian and western waterweeds. Our ability to confirm distribution and pace of spread of invasive and noninvasive species will improve with increased application of molecular techniques.</p>","language":"English","publisher":"Aquatic Plant Management Society","usgsCitation":"Rybicki, N.B., Kirshtein, J.D., and Voytek, M.A., 2013, Molecular techniques to distinguish morphologically similar <i>Hydrilla verticillata</i>, <i>Egeria densa</i>, <i>Elodea nuttallii</i>, and <i>Elodea canadensis</i>: Journal of Aquatic Plant Management, v. 51, p. 94-102.","productDescription":"9 p.","startPage":"94","endPage":"102","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-027435","costCenters":[],"links":[{"id":324578,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":297318,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://apms.org/2015/01/journal-of-aquatic-plant-management-volume-51-2013/"}],"country":"UNITED STATES","volume":"51","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"57739fb3e4b07657d1a90cef","contributors":{"authors":[{"text":"Rybicki, Nancy B. 0000-0002-2205-7927 nrybicki@usgs.gov","orcid":"https://orcid.org/0000-0002-2205-7927","contributorId":2142,"corporation":false,"usgs":true,"family":"Rybicki","given":"Nancy","email":"nrybicki@usgs.gov","middleInitial":"B.","affiliations":[{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":641180,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Kirshtein, Julie D.","contributorId":26033,"corporation":false,"usgs":true,"family":"Kirshtein","given":"Julie","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":641181,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Voytek, Mary A.","contributorId":91943,"corporation":false,"usgs":true,"family":"Voytek","given":"Mary","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":641182,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70042813,"text":"sir20125253 - 2013 - Groundwater quality and the relation between pH values and occurrence of trace elements and radionuclides in water samples collected from private wells in part of the Kickapoo Tribe of Oklahoma Jurisdictional Area, central Oklahoma, 2011","interactions":[],"lastModifiedDate":"2013-01-24T13:52:51","indexId":"sir20125253","displayToPublicDate":"2013-01-24T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2012-5253","title":"Groundwater quality and the relation between pH values and occurrence of trace elements and radionuclides in water samples collected from private wells in part of the Kickapoo Tribe of Oklahoma Jurisdictional Area, central Oklahoma, 2011","docAbstract":"From 1999 to 2007, the Indian Health Service reported that gross alpha-particle activities and concentrations of uranium exceeded the Maximum Contaminant Levels for public drinking-water supplies in water samples from six private wells and two test wells in a rural residential neighborhood in the Kickapoo Tribe of Oklahoma Jurisdictional Area, in central Oklahoma. Residents in this rural area use groundwater from Quaternary-aged terrace deposits and the Permian-aged Garber-Wellington aquifer for domestic purposes. Uranium and other trace elements, specifically arsenic, chromium, and selenium, occur naturally in rocks composing the Garber-Wellington aquifer and in low concentrations in groundwater throughout its extent. Previous studies have shown that pH values above 8.0 from cation-exchange processes in the aquifer cause selected metals such as arsenic, chromium, selenium, and uranium to desorb (if present) from mineral surfaces and become mobile in water. On the basis of this information, the U.S. Geological Survey, in cooperation with the Kickapoo Tribe of Oklahoma, conducted a study in 2011 to describe the occurrence of selected trace elements and radionuclides in groundwater and to determine if pH could be used as a surrogate for laboratory analysis to quickly and inexpensively identify wells that might contain high concentrations of uranium and other trace elements. The pH and specific conductance of groundwater from 59 private wells were measured in the field in an area of about 18 square miles in Lincoln and Pottawatomie Counties. Twenty of the 59 wells also were sampled for dissolved concentrations of major ions, trace elements, gross alpha-particle and gross beta-particle activities, uranium, radium-226, radium-228, and radon-222 gas. Arsenic concentrations exceeded the Maximum Contaminant Level of 10 micrograms per liter in one sample having a concentration of 24.7 micrograms per liter. Selenium concentrations exceeded the Maximum Contaminant Level of 50 micrograms per liter in one sample having a concentration of 147 micrograms per liter. Both samples had alkaline pH values, 8.0 and 8.4, respectively. Uranium concentrations ranged from 0.02 to 383 micrograms per liter with 5 of 20 samples exceeding the Maximum Contaminant Level of 30 micrograms per liter; the five wells with uranium concentrations exceeding 30 micrograms per liter had pH values ranging from 8.0 to 8.5. Concentrations of uranium and radon-222 and gross alpha-particle activity showed a positive relation to pH, with the highest concentrations and activity in samples having pH values of 8.0 or above. The groundwater samples contained dissolved oxygen and high concentrations of bicarbonate; these characteristics are also factors in increasing uranium solubility.  Concentrations of radium-226 and radium-228 (combined) ranged from 0.03 to 1.7 picocuries per liter, with a median concentration of 0.45 picocuries per liter for all samples. Radon-222 concentrations ranged from 95 to 3,600 picocuries per liter with a median concentration of 261 picocuries per liter. Eight samples having pH values ranging from 8.0 to 8.7 exceeded the proposed Maximum Contaminant Level of 300 picocuries per liter for radon-222. Eight samples exceeded the 15 picocuries per liter Maximum Contaminant Level for gross alpha-particle activity at 72 hours (after sample collection) and at 30 days (after the initial count); those samples had pH values ranging from 8.0 to 8.5. Gross beta-particle activity increased in 15 of 21 samples during the interval from 72 hours to 30 days. The increase in gross beta-particle activity over time probably was caused by the ingrowth and decay of uranium daughter products that emit beta particles. Water-quality data collected for this study indicate that pH values above 8.0 are associated with potentially high concentrations of uranium and radon-222 and high gross alpha-particle activity in the study area. High pH values also are associated with potentially high concentrations of arsenic, chromium, and selenium in groundwater when these elements occur in the aquifer matrix along groundwater-flow paths.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20125253","collaboration":"Prepared in cooperation with the Kickapoo Tribe of Oklahoma","usgsCitation":"Becker, C., 2013, Groundwater quality and the relation between pH values and occurrence of trace elements and radionuclides in water samples collected from private wells in part of the Kickapoo Tribe of Oklahoma Jurisdictional Area, central Oklahoma, 2011: U.S. Geological Survey Scientific Investigations Report 2012-5253, vii, 47 p., https://doi.org/10.3133/sir20125253.","productDescription":"vii, 47 p.","numberOfPages":"60","costCenters":[{"id":516,"text":"Oklahoma Water Science Center","active":true,"usgs":true}],"links":[{"id":266417,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir_2012_5253.gif"},{"id":266416,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2012/5253/SIR2012-5253.pdf"},{"id":266415,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2012/5253/"}],"scale":"100000","projection":"Albers Equal Area Conic projection","datum":"North American Datum, 1983","country":"United States","state":"Oklahoma","otherGeospatial":"Kickapoo Tribe Of Oklahoma Jurisdictional Area","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -98.00,35.83 ], [ -98.00,36.16 ], [ -95.67,36.16 ], [ -95.67,35.83 ], [ -98.00,35.83 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51026617e4b0d4f5ea817bf9","contributors":{"authors":[{"text":"Becker, Carol 0000-0001-6652-4542 cjbecker@usgs.gov","orcid":"https://orcid.org/0000-0001-6652-4542","contributorId":2489,"corporation":false,"usgs":true,"family":"Becker","given":"Carol","email":"cjbecker@usgs.gov","affiliations":[{"id":516,"text":"Oklahoma Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472319,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70042804,"text":"ds737 - 2013 - Electron donor concentrations in sediments and sediment properties at the agricultural chemicals team research site near New Providence, Iowa, 2006-07","interactions":[],"lastModifiedDate":"2026-05-18T16:31:17.839821","indexId":"ds737","displayToPublicDate":"2013-01-24T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":310,"text":"Data Series","code":"DS","onlineIssn":"2327-638X","printIssn":"2327-0271","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"737","title":"Electron donor concentrations in sediments and sediment properties at the agricultural chemicals team research site near New Providence, Iowa, 2006-07","docAbstract":"The concentrations of electron donors in aquifer sediments are important to the understanding of the fate and transport of redox-sensitive constituents in groundwater, such as nitrate. For a study by the U.S. Geological Survey National Water-Quality Assessment Program, 50 sediment samples were collected from below the water table from 11 boreholes at the U.S. Geological Survey Agricultural Chemicals Team research site near New Providence, Iowa, during 2006-07. All samples were analyzed for gravel, sand (coarse, medium, and fine), silt, clay, Munsell soil color, inorganic carbon content, and for the following electron donors: organic carbon, ferrous iron, and inorganic sulfide. A subset of 14 sediment samples also was analyzed for organic sulfur, but all of these samples had concentrations less than the method detection limit; therefore, the presence of this potential electron donor was not considered further. X-ray diffraction analyses provided important semi-quantitative information of well-crystallized dominant minerals within the sediments that might be contributing electron donors.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ds737","collaboration":"National Water-Quality Assessment Program","usgsCitation":"Maharjan, B., Korom, S.F., and Smith, E.A., 2013, Electron donor concentrations in sediments and sediment properties at the agricultural chemicals team research site near New Providence, Iowa, 2006-07: U.S. Geological Survey Data Series 737, vi, 17 p., https://doi.org/10.3133/ds737.","productDescription":"vi, 17 p.","numberOfPages":"28","onlineOnly":"Y","ipdsId":"IP-025991","costCenters":[{"id":392,"text":"Minnesota Water Science Center","active":true,"usgs":true}],"links":[{"id":504487,"rank":4,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_98074.htm"},{"id":266359,"rank":1,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/ds/737/ds737.pdf"},{"id":266358,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/ds/737/"},{"id":266360,"rank":3,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ds_737.gif"}],"country":"United States","state":"Iowa","city":"New Providence","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -93.83,42.25 ], [ -93.83,42.58 ], [ -93.00,42.58 ], [ -93.00,42.25 ], [ -93.83,42.25 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5102660fe4b0d4f5ea817bd2","contributors":{"authors":[{"text":"Maharjan, Bijesh","contributorId":99444,"corporation":false,"usgs":true,"family":"Maharjan","given":"Bijesh","email":"","affiliations":[],"preferred":false,"id":472302,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Korom, Scott F.","contributorId":27759,"corporation":false,"usgs":true,"family":"Korom","given":"Scott","email":"","middleInitial":"F.","affiliations":[],"preferred":false,"id":472301,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Smith, Erik A. 0000-0001-8434-0798 easmith@usgs.gov","orcid":"https://orcid.org/0000-0001-8434-0798","contributorId":1405,"corporation":false,"usgs":true,"family":"Smith","given":"Erik","email":"easmith@usgs.gov","middleInitial":"A.","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true},{"id":392,"text":"Minnesota Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472300,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70042825,"text":"ofr20131010 - 2013 - Development of a database-driven system for simulating water temperature in the lower Yakima River main stem, Washington, for various climate scenarios","interactions":[],"lastModifiedDate":"2013-01-24T15:54:30","indexId":"ofr20131010","displayToPublicDate":"2013-01-24T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-1010","title":"Development of a database-driven system for simulating water temperature in the lower Yakima River main stem, Washington, for various climate scenarios","docAbstract":"A model for simulating daily maximum and mean water temperatures was developed by linking two existing models: one developed by the U.S. Geological Survey and one developed by the Bureau of Reclamation. The study area included the lower Yakima River main stem between the Roza Dam and West Richland, Washington. To automate execution of the labor-intensive models, a database-driven model automation program was developed to decrease operation costs, to reduce user error, and to provide the capability to perform simulations quickly for multiple management and climate change scenarios. Microsoft© SQL Server 2008 R2 Integration Services packages were developed to (1) integrate climate, flow, and stream geometry data from diverse sources (such as weather stations, a hydrologic model, and field measurements) into a single relational database; (2) programmatically generate heavily formatted model input files; (3) iteratively run water temperature simulations; (4) process simulation results for export to other models; and (5) create a database-driven infrastructure that facilitated experimentation with a variety of scenarios, node permutations, weather data, and hydrologic conditions while minimizing costs of running the model with various model configurations. As a proof-of-concept exercise, water temperatures were simulated for a \"Current Conditions\" scenario, where local weather data from 1980 through 2005 were used as input, and for \"Plus 1\" and \"Plus 2\" climate warming scenarios, where the average annual air temperatures used in the Current Conditions scenario were increased by 1degree Celsius (°C) and by 2°C, respectively. Average monthly mean daily water temperatures simulated for the Current Conditions scenario were compared to measured values at the Bureau of Reclamation Hydromet gage at Kiona, Washington, for 2002-05. Differences ranged between 1.9° and 1.1°C for February, March, May, and June, and were less than 0.8°C for the remaining months of the year. The difference between current conditions and measured monthly values for the two warmest months (July and August) were 0.5°C and 0.2°C, respectively. The model predicted that water temperature generally becomes less sensitive to air temperature increases as the distance from the mouth of the river decreases. As a consequence, the difference between climate warming scenarios also decreased. The pattern of decreasing sensitivity is most pronounced from August to October. Interactive graphing tools were developed to explore the relative sensitivity of average monthly and mean daily water temperature to increases in air temperature for model output locations along the lower Yakima River main stem.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20131010","usgsCitation":"Voss, F., and Maule, A., 2013, Development of a database-driven system for simulating water temperature in the lower Yakima River main stem, Washington, for various climate scenarios: U.S. Geological Survey Open-File Report 2013-1010, iv, 20 p., https://doi.org/10.3133/ofr20131010.","productDescription":"iv, 20 p.","numberOfPages":"28","onlineOnly":"Y","costCenters":[{"id":622,"text":"Washington Water Science Center","active":true,"usgs":true}],"links":[{"id":266437,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ofr_2013_1010.jpg"},{"id":266435,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/of/2013/1010/"},{"id":266436,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2013/1010/pdf/ofr20131010.pdf"}],"country":"United States","state":"Washington","otherGeospatial":"Yakima River","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -120.67,46.00 ], [ -120.67,47.00 ], [ -119.00,47.00 ], [ -119.00,46.00 ], [ -120.67,46.00 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5102660ee4b0d4f5ea817bcb","contributors":{"authors":[{"text":"Voss, Frank","contributorId":71848,"corporation":false,"usgs":true,"family":"Voss","given":"Frank","affiliations":[],"preferred":false,"id":472340,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Maule, Alec","contributorId":50614,"corporation":false,"usgs":true,"family":"Maule","given":"Alec","affiliations":[],"preferred":false,"id":472339,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70207150,"text":"70207150 - 2013 - Impacts of climate, lake size, and supra- and sub-permafrost groundwater flow on lake-talik evolution, Yukon Flats, Alaska (USA)","interactions":[],"lastModifiedDate":"2019-12-09T14:01:35","indexId":"70207150","displayToPublicDate":"2013-01-23T13:52:18","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1923,"text":"Hydrogeology Journal","active":true,"publicationSubtype":{"id":10}},"title":"Impacts of climate, lake size, and supra- and sub-permafrost groundwater flow on lake-talik evolution, Yukon Flats, Alaska (USA)","docAbstract":"<p><span>In cold regions, hydrologic systems possess seasonal and perennial ice-free zones (taliks) within areas of permafrost that control and are enhanced by groundwater flow. Simulation of talik development that follows lake formation in watersheds modeled after those in the Yukon Flats of interior Alaska (USA) provides insight on the coupled interaction between groundwater flow and ice distribution. The SUTRA groundwater simulator with freeze–thaw physics is used to examine the effect of climate, lake size, and lake–groundwater relations on talik formation. Considering a range of these factors, simulated times for a through-going sub-lake talik to form through 90&nbsp;m of permafrost range from ∼200 to &gt; 1,000 &nbsp;years (vertical thaw rates &lt; 0.1–0.5&nbsp; m yr</span><sup>−1</sup><span>). Seasonal temperature cycles along lake margins impact supra-permafrost flow and late-stage cryologic processes. Warmer climate accelerates complete permafrost thaw and enhances seasonal flow within the supra-permafrost layer. Prior to open talik formation, sub-lake permafrost thaw is dominated by heat conduction. When hydraulic conditions induce upward or downward flow between the lake and sub-permafrost aquifer, thaw rates are greatly increased. The complexity of ground-ice and water-flow interplay, together with anticipated warming in the arctic, underscores the utility of coupled groundwater-energy transport models in evaluating hydrologic systems impacted by permafrost.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s10040-012-0941-4","usgsCitation":"Wellman, T., Voss, C.I., and Walvoord, M.A., 2013, Impacts of climate, lake size, and supra- and sub-permafrost groundwater flow on lake-talik evolution, Yukon Flats, Alaska (USA): Hydrogeology Journal, v. 21, no. 1, p. 281-298, https://doi.org/10.1007/s10040-012-0941-4.","productDescription":"18 p.","startPage":"281","endPage":"298","ipdsId":"IP-041642","costCenters":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"links":[{"id":370114,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","otherGeospatial":"Yukon Flats National Wildlife Refuge","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -148.20556640625,\n              65.7509390575002\n            ],\n            [\n              -143.9703369140625,\n              65.7509390575002\n            ],\n            [\n              -143.9703369140625,\n              66.7116848761489\n            ],\n            [\n              -148.20556640625,\n              66.7116848761489\n            ],\n            [\n              -148.20556640625,\n              65.7509390575002\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"21","issue":"1","noUsgsAuthors":false,"publicationDate":"2013-01-23","publicationStatus":"PW","contributors":{"authors":[{"text":"Wellman, Tristan 0000-0003-3049-6214 twellman@usgs.gov","orcid":"https://orcid.org/0000-0003-3049-6214","contributorId":2166,"corporation":false,"usgs":true,"family":"Wellman","given":"Tristan","email":"twellman@usgs.gov","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":776979,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Voss, Clifford I. 0000-0001-5923-2752 cvoss@usgs.gov","orcid":"https://orcid.org/0000-0001-5923-2752","contributorId":1559,"corporation":false,"usgs":true,"family":"Voss","given":"Clifford","email":"cvoss@usgs.gov","middleInitial":"I.","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"preferred":true,"id":776980,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Walvoord, Michelle Ann 0000-0003-4269-8366 walvoord@usgs.gov","orcid":"https://orcid.org/0000-0003-4269-8366","contributorId":147211,"corporation":false,"usgs":true,"family":"Walvoord","given":"Michelle","email":"walvoord@usgs.gov","middleInitial":"Ann","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":776981,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70042776,"text":"tm6A43 - 2013 - Description of input and examples for PHREEQC version 3: A computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations","interactions":[],"lastModifiedDate":"2025-05-15T13:50:03.749337","indexId":"tm6A43","displayToPublicDate":"2013-01-23T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":335,"text":"Techniques and Methods","code":"TM","onlineIssn":"2328-7055","printIssn":"2328-7047","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"6-A43","title":"Description of input and examples for PHREEQC version 3: A computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations","docAbstract":"PHREEQC version 3 is a computer program written in the C and C++ programming languages that is designed to perform a wide variety of aqueous geochemical calculations. PHREEQC implements several types of aqueous models: two ion-association aqueous models (the Lawrence Livermore National Laboratory model and WATEQ4F), a Pitzer specific-ion-interaction aqueous model, and the SIT (Specific ion Interaction Theory) aqueous model. Using any of these aqueous models, PHREEQC has capabilities for (1) speciation and saturation-index calculations; (2) batch-reaction and one-dimensional (1D) transport calculations with reversible and irreversible reactions, which include aqueous, mineral, gas, solid-solution, surface-complexation, and ion-exchange equilibria, and specified mole transfers of reactants, kinetically controlled reactions, mixing of solutions, and pressure and temperature changes; and (3) inverse modeling, which finds sets of mineral and gas mole transfers that account for differences in composition between waters within specified compositional uncertainty limits. Many new modeling features were added to PHREEQC version 3 relative to version 2. The Pitzer aqueous model (<i>pitzer.dat</i> database, with keyword <i>PITZER</i>) can be used for high-salinity waters that are beyond the range of application for the Debye-Hückel theory. The Peng-Robinson equation of state has been implemented for calculating the solubility of gases at high pressure. Specific volumes of aqueous species are calculated as a function of the dielectric properties of water and the ionic strength of the solution, which allows calculation of pressure effects on chemical reactions and the density of a solution. The specific conductance and the density of a solution are calculated and printed in the output file. In addition to Runge-Kutta integration, a stiff ordinary differential equation solver (CVODE) has been included for kinetic calculations with multiple rates that occur at widely different time scales. Surface complexation can be calculated with the CD-MUSIC (Charge Distribution MUltiSIte Complexation) triple-layer model in addition to the diffuse-layer model. The composition of the electrical double layer of a surface can be estimated by using the Donnan approach, which is more robust and faster than the alternative Borkovec-Westall integration. Multicomponent diffusion, diffusion in the electrostatic double layer on a surface, and transport of colloids with simultaneous surface complexation have been added to the transport module. A series of keyword data blocks has been added for isotope calculations—<i>ISOTOPES, CALCULATE_VALUES, ISOTOPE_ALPHAS, ISOTOPE_RATIOS, and NAMED_EXPRESSIONS</i>. Solution isotopic data can be input in conventional units (for example, permil, percent modern carbon, or tritium units) and the numbers are converted to moles of isotope by PHREEQC. The isotopes are treated as individual components (they must be defined as individual master species) so that each isotope has its own set of aqueous species, gases, and solids. The isotope-related keywords allow calculating equilibrium fractionation of isotopes among the species and phases of a system. The calculated isotopic compositions are printed in easily readable conventional units. New keywords and options facilitate the setup of input files and the interpretation of the results. Keyword data blocks can be copied (keyword <i>COPY</i>) and deleted (keyword <i>DELETE</i>). Keyword data items can be altered by using the keyword data blocks with the _MODIFY extension and a simulation can be run with all reactants of a given index number (keyword <i>RUN_CELLS</i>). The definition of the complete chemical state of all reactants of PHREEQC can be saved in a file in a raw data format ( <i>DUMP</i> and _RAW keywords). The file can be read as part of another input file with the <i>INCLUDE$</i> keyword. These keywords facilitate the use of IPhreeqc, which is a module implementing all PHREEQC version 3 capabilities; the module is designed to be used in other programs that need to implement geochemical calculations; for example, transport codes. Charting capabilities have been added to some versions of PHREEQC. Charting capabilities have been added to Windows distributions of PHREEQC version 3. (Charting on Linux requires installation of Wine.) The keyword data block <i>USER_GRAPH</i> allows selection of data for plotting and manipulation of chart appearance. Almost any results from geochemical simulations (for example, concentrations, activities, or saturation indices) can be retrieved by using Basic language functions and specified as data for plotting in <i>USER_GRAPH</i>. Results of transport simulations can be plotted against distance or time. Data can be added to a chart from tab-separated-values files. All input for PHREEQC version 3 is defined in keyword data blocks, each of which may have a series of identifiers for specific types of data. This report provides a complete description of each keyword data block and its associated identifiers. Input files for 22 examples that demonstrate most of the capabilities of PHREEQC version 3 are described and the results of the example simulations are presented and discussed.","largerWorkType":{"id":18,"text":"Report"},"largerWorkTitle":"Section A: Groundwater in Book 6 <i>Modeling Techniques</i>","largerWorkSubtype":{"id":5,"text":"USGS Numbered Series"},"language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/tm6A43","collaboration":"This report is Chapter 43 of Section A: Groundwater in Book 6 <i>Modeling Techniques</i>.","usgsCitation":"Parkhurst, D.L., and Appelo, C., 2013, Description of input and examples for PHREEQC version 3: A computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations: U.S. Geological Survey Techniques and Methods 6-A43, xx, 497 p., https://doi.org/10.3133/tm6A43.","productDescription":"xx, 497 p.","numberOfPages":"519","onlineOnly":"Y","additionalOnlineFiles":"N","costCenters":[{"id":434,"text":"National Research Program","active":false,"usgs":true}],"links":[{"id":485934,"rank":4,"type":{"id":35,"text":"Software Release"},"url":"https://www.usgs.gov/software/phreeqc-version-3","text":"PHREEQC Version 3"},{"id":266311,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/tm/06/a43/","linkFileType":{"id":5,"text":"html"}},{"id":266313,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/tm_6_a43.gif"},{"id":266312,"rank":3,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/tm/06/a43/pdf/tm6-A43.pdf","linkFileType":{"id":1,"text":"pdf"}}],"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51010684e4b033b1feeb2bd1","contributors":{"authors":[{"text":"Parkhurst, David L. 0000-0003-3348-1544 dlpark@usgs.gov","orcid":"https://orcid.org/0000-0003-3348-1544","contributorId":1088,"corporation":false,"usgs":true,"family":"Parkhurst","given":"David","email":"dlpark@usgs.gov","middleInitial":"L.","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":472233,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Appelo, C.A.J.","contributorId":106539,"corporation":false,"usgs":true,"family":"Appelo","given":"C.A.J.","email":"","affiliations":[],"preferred":false,"id":472234,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70042781,"text":"ofr20121268 - 2013 - Concentrations of elements in fish fillets, fish muscle plugs, and crayfish from the 2011 Missouri Department of Conservation general contaminant monitoring program","interactions":[],"lastModifiedDate":"2013-01-23T14:34:33","indexId":"ofr20121268","displayToPublicDate":"2013-01-23T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2012-1268","title":"Concentrations of elements in fish fillets, fish muscle plugs, and crayfish from the 2011 Missouri Department of Conservation general contaminant monitoring program","docAbstract":"This report presents the results of a contaminant monitoring survey conducted annually by the Missouri Department of Conservation to examine the levels of selected elemental contaminants in fish fillets, fish muscle plugs, and crayfish. Fillet samples of yellow bullhead (<i>Ameiurus natalis</i>), golden redhorse (<i>Moxostoma erythrurum</i>), longear sunfish (<i>Lepomis megalotis</i>), and channel catfish (<i>Ictalurus punctatus</i>) were collected from six sites as part of the Missouri Department of Conservation’s Fish Contaminant Monitoring Program. Fish dorsal muscle plugs were collected from largemouth bass (<i>Micropterus salmoides</i>) at eight of the sites, and crayfish from two sites. Following preparation and analysis of the samples, highlights of the data were as follows: cadmium and lead residues were most elevated in crayfish tissue samples from the Big River at Cherokee Landing, with 1 to 8 micrograms per gram dry weight and 22 to 45 micrograms per gram dry weight, respectively. Some dorsal muscle plugs from largemouth bass collected from Clearwater Lake, Lake St. Louis, Noblett Lake, Hazel Creek Lake, and Harrison County Lake contained mercury residues (1.7 to 4.7 micrograms per gram dry weight) that exceeded the U.S. Environmental Protection Agency Water Quality Criterion of 1.5 micrograms per gram dry weight of fish tissue (equivalent to 0.30 micrograms per gram wet weight).","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20121268","collaboration":"Prepared in collaboration with the Missouri Department of Conservation","usgsCitation":"May, T.W., Walther, M., Brumbaugh, W.G., and McKee, M., 2013, Concentrations of elements in fish fillets, fish muscle plugs, and crayfish from the 2011 Missouri Department of Conservation general contaminant monitoring program: U.S. Geological Survey Open-File Report 2012-1268, iv, 12 p., https://doi.org/10.3133/ofr20121268.","productDescription":"iv, 12 p.","numberOfPages":"20","onlineOnly":"Y","additionalOnlineFiles":"N","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":266316,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ofr_2012_1268.gif"},{"id":266314,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/of/2012/1268/"},{"id":266315,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2012/1268/of12-1268.pdf"}],"country":"United States","state":"Missouri","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -95.78,36.0 ], [ -95.78,40.6 ], [ -89.0,40.6 ], [ -89.0,36.0 ], [ -95.78,36.0 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51010683e4b033b1feeb2bcd","contributors":{"authors":[{"text":"May, Thomas W. tmay@usgs.gov","contributorId":2598,"corporation":false,"usgs":true,"family":"May","given":"Thomas","email":"tmay@usgs.gov","middleInitial":"W.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":false,"id":472249,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Walther, Michael J. mwalther@usgs.gov","contributorId":2852,"corporation":false,"usgs":true,"family":"Walther","given":"Michael J.","email":"mwalther@usgs.gov","affiliations":[],"preferred":true,"id":472250,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Brumbaugh, William G. 0000-0003-0081-375X bbrumbaugh@usgs.gov","orcid":"https://orcid.org/0000-0003-0081-375X","contributorId":493,"corporation":false,"usgs":true,"family":"Brumbaugh","given":"William","email":"bbrumbaugh@usgs.gov","middleInitial":"G.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":472248,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"McKee, Michael J.","contributorId":59527,"corporation":false,"usgs":true,"family":"McKee","given":"Michael J.","affiliations":[],"preferred":false,"id":472251,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70042782,"text":"sir20135004 - 2013 - Simulated effects of Lower Floridan aquifer pumping on the Upper Floridan aquifer at Pooler, Chatham County, Georgia","interactions":[],"lastModifiedDate":"2017-01-17T20:36:07","indexId":"sir20135004","displayToPublicDate":"2013-01-23T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-5004","title":"Simulated effects of Lower Floridan aquifer pumping on the Upper Floridan aquifer at Pooler, Chatham County, Georgia","docAbstract":"A revised regional groundwater-flow model was used to assess the potential effects on the Upper Floridan aquifer (UFA) of pumping the Lower Floridan aquifer (LFA) from a new well (35Q069) located at the City of Pooler in coastal Georgia near Savannah. The spatial resolution of the original regional, steady-state, groundwater-flow model was increased to incorporate detailed hydrogeologic information resulting from field investigations at Pooler and existing wells in the area. Simulation results using the U.S. Geological Survey finite-difference code MODFLOW indicated that long-term pumping at a rate of 780 gallons per minute (gal/min) from the LFA well 35Q069 would cause a maximum drawdown of about 2.52 feet (ft) in the UFA (scenario A). This maximum drawdown in the UFA was greater than the observed draw-down of 0.9 ft in the 72-hour aquifer test, but this is expected because the steady-state simulated drawdown represents long-term pumping conditions. Model results for scenario A indicate that drawdown in the UFA exceeded 1 ft over a 163-square-mile (mi<sup>2</sup>) area. Induced vertical leakage from the UFA provided about 98 percent of the water to the LFA; the area within 1 mile of the pumped well contributed about 81 percent of the water pumped. Simulated pumping changed regional water-budget components slightly and redistributed flow among model layers, namely increasing downward leakage in all layers, decreasing upward leakage in all layers above the LFA, increasing inflow to and decreasing outflow from lateral specified-head boundaries in the UA and LFA, and increasing the volume of induced recharge from the general head boundary to outcrop units. An additional two groundwater-pumping scenarios were run to establish that a linear relation exists between pumping rates of the LFA well 35Q069 (varied from 390 to 1,042 gal/min) and amount of drawdown in the UFA and LFA. Three groundwater-pumping scenarios were run to evaluate the amount of UFA pumping (128 to 340 gal/min) that would produce maximum drawdown in the UFA equivalent to that induced by pumping the LFA well 35Q069 at rates specified in scenarios A, B, and C (390 to 1,042 gal/min). Scenarios in which the LFA well 35Q069 was pumped produced a larger drawdown area in the UFA than scenarios in which the UFA well was pumped to offset the maximum UFA drawdown simulated by scenarios A, B, and C. Three additional groundwater-pumping scenarios were run to evaluate the combination of pumping reductions at existing Pooler UFA public-supply wells with the addition of pumping from the new LFA well. For each scenario, LFA well 35Q069 was pumped at different rates, and pumping at existing Pooler supply wells, located about 3.7 miles northward, was reduced according to UFA drawdown offsets (128 to 340 gal/min) established by scenarios D, E, and F. Decreases in the magnitude and areal extent of drawdown in the UFA in response to pumping the LFA well were realized for scenarios that simulated drawdown offsets (reductions) for the existing UFA wells at Pooler when compared with the magnitude and extent of drawdown resulting from scenarios that did not simulate drawdown offsets for the existing UFA wells at Pooler (scenarios A, B, and C). The revised model was evaluated for sensitivity by altering horizontal and vertical hydraulic conductivity in layers 5 through 7 (Floridan aquifer system) for newly established hydraulic-property zones by factors of 0.1, 0.5, 2.0, and 10.0. Results of the sensitivity analysis indicate that horizontal and vertical hydraulic conductivity of the UFA and LFA are the most important parameters in model simulations. The least sensitive parameters were the horizontal and vertical hydraulic conductivity of the Lower Floridan confining unit; changes to these parameters had little effect on simulated leakage and groundwater levels. The revised model reasonably depicts changes in groundwater levels resulting from pumping the LFA at Pooler at a rate of 780 gal/min. However, results are limited by the same model assumptions and design as the original model and placement of boundaries and type of boundary used exert the greatest control on overall groundwater flow and interaquifer leakage in the system. Simulation results have improved regional characterization of the Floridan aquifer system, which could be used by State officials in evaluating requests for groundwater withdrawal from the LFA.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20135004","collaboration":"Prepared in cooperation with the City of Pooler, Georgia","usgsCitation":"Cherry, G.S., and Clarke, J.S., 2013, Simulated effects of Lower Floridan aquifer pumping on the Upper Floridan aquifer at Pooler, Chatham County, Georgia: U.S. Geological Survey Scientific Investigations Report 2013-5004, viii, 46 p., https://doi.org/10.3133/sir20135004.","productDescription":"viii, 46 p.","numberOfPages":"58","onlineOnly":"Y","additionalOnlineFiles":"N","costCenters":[{"id":13634,"text":"South Atlantic Water Science Center","active":true,"usgs":true}],"links":[{"id":266324,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir_2013_5004.gif"},{"id":266318,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2013/5004/pdf/sir2013-5004.pdf"},{"id":266317,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2013/5004/"}],"country":"United States","state":"Georgia","county":"Beaufort County, Bryan County, Bulloch County, Chatham County, Effingham County, Evans County, Jasper County, Liberty County, Long County","city":"Pooler","otherGeospatial":"Upper Floridan aquifer","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -81.75,31.75 ], [ -81.75,32.25 ], [ -80.75,32.25 ], [ -80.75,31.75 ], [ -81.75,31.75 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51010686e4b033b1feeb2bd9","contributors":{"authors":[{"text":"Cherry, Gregory S. 0000-0002-5567-1587 gccherry@usgs.gov","orcid":"https://orcid.org/0000-0002-5567-1587","contributorId":1567,"corporation":false,"usgs":true,"family":"Cherry","given":"Gregory","email":"gccherry@usgs.gov","middleInitial":"S.","affiliations":[{"id":316,"text":"Georgia Water Science Center","active":true,"usgs":true},{"id":13634,"text":"South Atlantic Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472253,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Clarke, John S. jsclarke@usgs.gov","contributorId":400,"corporation":false,"usgs":true,"family":"Clarke","given":"John","email":"jsclarke@usgs.gov","middleInitial":"S.","affiliations":[{"id":316,"text":"Georgia Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472252,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70042759,"text":"sim3233 - 2013 - Bedrock topography of western Cape Cod, Massachusetts, based on bedrock altitudes from geologic borings and analysis of ambient seismic noise by the horizontal-to-vertical spectral-ratio method","interactions":[],"lastModifiedDate":"2013-01-23T11:30:27","indexId":"sim3233","displayToPublicDate":"2013-01-23T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":333,"text":"Scientific Investigations Map","code":"SIM","onlineIssn":"2329-132X","printIssn":"2329-1311","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"3233","title":"Bedrock topography of western Cape Cod, Massachusetts, based on bedrock altitudes from geologic borings and analysis of ambient seismic noise by the horizontal-to-vertical spectral-ratio method","docAbstract":"This report presents a topographic map of the bedrock surface beneath western Cape Cod, Massachusetts, that was prepared for use in groundwater-flow models of the Sagamore lens of the Cape Cod aquifer. The bedrock surface of western Cape Cod had been characterized previously through seismic refraction surveys and borings drilled to bedrock. The borings were mostly on and near the Massachusetts Military Reservation (MMR). The bedrock surface was first mapped by Oldale (1969), and mapping was updated in 2006 by the Air Force Center for Environmental Excellence (AFCEE, 2006). This report updates the bedrock-surface map with new data points collected by using a passive seismic technique based on the horizontal-to-vertical spectral ratio (HVSR) of ambient seismic noise (Lane and others, 2008) and from borings drilled to bedrock since the 2006 map was prepared. The HVSR method is based on a relationship between the resonance frequency of ambient seismic noise as measured at land surface and the thickness of the unconsolidated sediments that overlie consolidated bedrock. The HVSR method was shown by Lane and others (2008) to be an effective method for determining sediment thickness on Cape Cod owing to the distinct difference in the acoustic impedance between the sediments and the underlying bedrock. The HVSR data for 164 sites were combined with data from 559 borings to bedrock in the study area to create a spatially distributed dataset that was manually contoured to prepare a topographic map of the bedrock surface. The interpreted bedrock surface generally slopes downward to the southeast as was shown on the earlier maps by Oldale (1969) and AFCEE (2006). The surface also has complex small-scale topography characteristic of a glacially eroded surface. More information about the methods used to prepare the map is given in the pamphlet that accompanies this plate.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sim3233","collaboration":"Prepared in cooperation with the Army National Guard and the Air Forice Center for Engineering and the Environment. This report is available online and in CD-ROM format, please contact the <a href=\"https://mail.google.com/mail/?view=cm&fs=1&tf=1&to=dc_ma@usgs.gov\">Office Chief</a> for ordering information.","usgsCitation":"Fairchild, G.M., Lane, J.W., Voytek, E.B., and LeBlanc, D.R., 2013, Bedrock topography of western Cape Cod, Massachusetts, based on bedrock altitudes from geologic borings and analysis of ambient seismic noise by the horizontal-to-vertical spectral-ratio method: U.S. Geological Survey Scientific Investigations Map 3233, Pamphlet: iv, 17 p.; 1 Sheet: 48 x 36 inches; GIS materials; GIS instructions; 3 Tables; CD-ROM, https://doi.org/10.3133/sim3233.","productDescription":"Pamphlet: iv, 17 p.; 1 Sheet: 48 x 36 inches; GIS materials; GIS instructions; 3 Tables; CD-ROM","numberOfPages":"22","additionalOnlineFiles":"Y","costCenters":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"links":[{"id":266291,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sim_3233.jpg"},{"id":266278,"type":{"id":17,"text":"Plate"},"url":"https://pubs.usgs.gov/sim/3233/plates_pdfs/fairchild_ARCH_E_01-04-13_web_508.pdf"},{"id":266276,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sim/3233/"},{"id":266277,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sim/3233/pdf/sim3233_fairchild_pamphlet_508_01-10-13.pdf"},{"id":266279,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/sim/3233/gis_pack/gis.zip"},{"id":266280,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/sim/3233/pdf/GIS_file_guide_01-07-13_n.pdf"},{"id":266281,"type":{"id":2,"text":"Additional Report Piece"},"url":"https://pubs.usgs.gov/sim/3233/excel/fairchild_table1-1_20121203.xlsx"},{"id":266282,"type":{"id":2,"text":"Additional Report Piece"},"url":"https://pubs.usgs.gov/sim/3233/excel/fairchild_table1-2_20121203.xlsx"},{"id":266283,"type":{"id":2,"text":"Additional Report Piece"},"url":"https://pubs.usgs.gov/sim/3233/excel/fairchild_table1-3_20121203.xlsx"},{"id":266284,"type":{"id":25,"text":"Version History"},"url":"https://pubs.usgs.gov/sim/3233/versionHist.txt"},{"id":266285,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/sim/3233/sim3233_selector.htm"}],"scale":"24000","projection":"Universal Transverse Mercator projection, Zone 19","datum":"North American Datum of 1983","country":"United States","state":"Massachusetts","county":"Bourne;Falmouth;Mashper;Sandwich","otherGeospatial":"Cape Cod","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -70.708333,41.5 ], [ -70.708333,41.791667 ], [ -70.375,41.791667 ], [ -70.375,41.5 ], [ -70.708333,41.5 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51010660e4b033b1feeb2bc9","contributors":{"authors":[{"text":"Fairchild, Gillian M. gfairchi@usgs.gov","contributorId":4418,"corporation":false,"usgs":true,"family":"Fairchild","given":"Gillian","email":"gfairchi@usgs.gov","middleInitial":"M.","affiliations":[],"preferred":true,"id":472186,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lane, John W. Jr. jwlane@usgs.gov","contributorId":1738,"corporation":false,"usgs":true,"family":"Lane","given":"John","suffix":"Jr.","email":"jwlane@usgs.gov","middleInitial":"W.","affiliations":[{"id":486,"text":"OGW Branch of Geophysics","active":true,"usgs":true}],"preferred":false,"id":472184,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Voytek, Emily B. 0000-0003-0981-453X ebvoytek@usgs.gov","orcid":"https://orcid.org/0000-0003-0981-453X","contributorId":3575,"corporation":false,"usgs":true,"family":"Voytek","given":"Emily","email":"ebvoytek@usgs.gov","middleInitial":"B.","affiliations":[{"id":486,"text":"OGW Branch of Geophysics","active":true,"usgs":true}],"preferred":true,"id":472185,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"LeBlanc, Denis R. 0000-0002-4646-2628 dleblanc@usgs.gov","orcid":"https://orcid.org/0000-0002-4646-2628","contributorId":1696,"corporation":false,"usgs":true,"family":"LeBlanc","given":"Denis","email":"dleblanc@usgs.gov","middleInitial":"R.","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472183,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70042742,"text":"70042742 - 2013 - Implications for future survival of delta smelt from four climate change scenarios for the Sacramento–San Joaquin Delta, California","interactions":[],"lastModifiedDate":"2013-06-17T08:54:21","indexId":"70042742","displayToPublicDate":"2013-01-23T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1584,"text":"Estuaries and Coasts","active":true,"publicationSubtype":{"id":10}},"title":"Implications for future survival of delta smelt from four climate change scenarios for the Sacramento–San Joaquin Delta, California","docAbstract":"Changes in the position of the low salinity zone, a habitat suitability index, turbidity, and water temperature modeled from four 100-year scenarios of climate change were evaluated for possible effects on delta smelt <i>Hypomesus transpacificus</i>, which is endemic to the Sacramento–San Joaquin Delta. The persistence of delta smelt in much of its current habitat into the next century appears uncertain. By mid-century, the position of the low salinity zone in the fall and the habitat suitability index converged on values only observed during the worst droughts of the baseline period (1969–2000). Projected higher water temperatures would render waters historically inhabited by delta smelt near the confluence of the Sacramento and San Joaquin rivers largely uninhabitable. However, the scenarios of climate change are based on assumptions that require caution in the interpretation of the results. Projections like these provide managers with a useful tool for anticipating long-term challenges to managing fish populations and possibly adapting water management to ameliorate those challenges.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Estuaries and Coasts","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Springer","doi":"10.1007/s12237-013-9585-4","usgsCitation":"Brown, L.R., Bennett, W.A., Wagner, R.W., Morgan-King, T., Knowles, N., Feyrer, F., Schoellhamer, D., Stacey, M., and Dettinger, M., 2013, Implications for future survival of delta smelt from four climate change scenarios for the Sacramento–San Joaquin Delta, California: Estuaries and Coasts, v. 36, no. 4, p. 754-774, https://doi.org/10.1007/s12237-013-9585-4.","productDescription":"21 p.","startPage":"754","endPage":"774","ipdsId":"IP-030485","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":266275,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":266274,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1007/s12237-013-9585-4"}],"country":"United States","state":"California","city":"Antioch;Rio Vista","otherGeospatial":"Sacramento River;San Joaquin River;Suisun Bay","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -122.0,37.75 ], [ -122.0,38.5 ], [ -121.25,38.5 ], [ -121.25,37.75 ], [ -122.0,37.75 ] ] ] } } ] }","volume":"36","issue":"4","noUsgsAuthors":false,"publicationDate":"2013-01-17","publicationStatus":"PW","scienceBaseUri":"51010685e4b033b1feeb2bd5","contributors":{"authors":[{"text":"Brown, Larry R. 0000-0001-6702-4531 lrbrown@usgs.gov","orcid":"https://orcid.org/0000-0001-6702-4531","contributorId":1717,"corporation":false,"usgs":true,"family":"Brown","given":"Larry","email":"lrbrown@usgs.gov","middleInitial":"R.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472146,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bennett, William A.","contributorId":88988,"corporation":false,"usgs":true,"family":"Bennett","given":"William","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":472150,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wagner, R. Wayne","contributorId":40339,"corporation":false,"usgs":true,"family":"Wagner","given":"R.","email":"","middleInitial":"Wayne","affiliations":[],"preferred":false,"id":472149,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Morgan-King, Tara 0000-0001-5632-5232","orcid":"https://orcid.org/0000-0001-5632-5232","contributorId":32804,"corporation":false,"usgs":true,"family":"Morgan-King","given":"Tara","affiliations":[],"preferred":false,"id":472148,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Knowles, Noah 0000-0001-5652-1049 nknowles@usgs.gov","orcid":"https://orcid.org/0000-0001-5652-1049","contributorId":1380,"corporation":false,"usgs":true,"family":"Knowles","given":"Noah","email":"nknowles@usgs.gov","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"preferred":true,"id":472145,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Feyrer, Frederick 0000-0003-1253-2349","orcid":"https://orcid.org/0000-0003-1253-2349","contributorId":106736,"corporation":false,"usgs":true,"family":"Feyrer","given":"Frederick","affiliations":[],"preferred":false,"id":472151,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Schoellhamer, David H. 0000-0001-9488-7340 dschoell@usgs.gov","orcid":"https://orcid.org/0000-0001-9488-7340","contributorId":631,"corporation":false,"usgs":true,"family":"Schoellhamer","given":"David H.","email":"dschoell@usgs.gov","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472143,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Stacey, Mark T.","contributorId":13367,"corporation":false,"usgs":true,"family":"Stacey","given":"Mark T.","affiliations":[],"preferred":false,"id":472147,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Dettinger, Mike 0000-0002-7509-7332 mddettin@usgs.gov","orcid":"https://orcid.org/0000-0002-7509-7332","contributorId":859,"corporation":false,"usgs":true,"family":"Dettinger","given":"Mike","email":"mddettin@usgs.gov","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"preferred":false,"id":472144,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70073367,"text":"70073367 - 2013 - Nutrient cycling, connectivity, and free-floating plant abundance in backwater lakes of the Upper Mississippi River","interactions":[],"lastModifiedDate":"2014-01-21T14:59:43","indexId":"70073367","displayToPublicDate":"2013-01-22T14:49:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3302,"text":"River Systems","active":true,"publicationSubtype":{"id":10}},"title":"Nutrient cycling, connectivity, and free-floating plant abundance in backwater lakes of the Upper Mississippi River","docAbstract":"River eutrophication may cause the formation of dense surface mats of free floating plants (FFP; e.g., duckweeds and filamentous algae) which may adversely affect the ecosystem. We investigated associations among hydraulic connectivity to the channel, nutrient cycling, FFP, submersed aquatic vegetation (SAV), and dissolved oxygen concentration (DO) in ten backwater lakes of the Upper Mississippi River (UMR) that varied in connectivity to the channel. Greater connectivity was associated with higher water column nitrate (NO3-N) concentration, higher rates of sediment phosphorus (P) release, and higher rates of NO3-N flux to the sediments. Rates of sediment P and N (as NH4-N) release were similar to those of eutrophic lakes. Water column nutrient concentrations were high, and FFP tissue was nutrient rich suggesting that the eutrophic condition of the UMR often facilitated abundant FFP. However, tissue nutrient concentrations, and the associations between FFP biomass and water column nutrient concentrations, suggested that nutrients constrained FFP abundance at some sites. FFP abundance was positively associated with SAV abundance and negatively associated with dissolved oxygen concentration. These results illustrate important connections among hydraulic connectivity, nutrient cycling, FFP, SAV, and DO in the backwaters of a large, floodplain river.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"River Systems","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Schweizerbart and Borntraeger science publishers","doi":"10.1127/1868-5749/2013/0080","usgsCitation":"Houser, J.N., Giblin, S.M., James, W., Langrehr, H., Rogala, J.T., Sullivan, J.F., and Gray, B.R., 2013, Nutrient cycling, connectivity, and free-floating plant abundance in backwater lakes of the Upper Mississippi River: River Systems, v. 21, no. 1, p. 71-89, https://doi.org/10.1127/1868-5749/2013/0080.","productDescription":"19 p.","startPage":"71","endPage":"89","numberOfPages":"19","ipdsId":"IP-030913","costCenters":[],"links":[{"id":281344,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":281343,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1127/1868-5749/2013/0080"}],"country":"United States","otherGeospatial":"Upper Mississippi River","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -95.25,37.19 ], [ -95.25,47.50 ], [ -89.09,47.50 ], [ -89.09,37.19 ], [ -95.25,37.19 ] ] ] } } ] }","volume":"21","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"53cd696ae4b0b29085102aa5","contributors":{"authors":[{"text":"Houser, Jeffrey N. 0000-0003-3295-3132 jhouser@usgs.gov","orcid":"https://orcid.org/0000-0003-3295-3132","contributorId":2769,"corporation":false,"usgs":true,"family":"Houser","given":"Jeffrey","email":"jhouser@usgs.gov","middleInitial":"N.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":488645,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Giblin, Shawn M.","contributorId":99889,"corporation":false,"usgs":true,"family":"Giblin","given":"Shawn","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":488649,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"James, William F.","contributorId":75472,"corporation":false,"usgs":true,"family":"James","given":"William F.","affiliations":[],"preferred":false,"id":488648,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Langrehr, H.A.","contributorId":32082,"corporation":false,"usgs":true,"family":"Langrehr","given":"H.A.","email":"","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":false,"id":488647,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Rogala, James T. 0000-0002-1954-4097 jrogala@usgs.gov","orcid":"https://orcid.org/0000-0002-1954-4097","contributorId":2651,"corporation":false,"usgs":true,"family":"Rogala","given":"James","email":"jrogala@usgs.gov","middleInitial":"T.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":488644,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Sullivan, John F.","contributorId":21067,"corporation":false,"usgs":false,"family":"Sullivan","given":"John","email":"","middleInitial":"F.","affiliations":[{"id":6913,"text":"Wisconsin Department of Natural Resources","active":true,"usgs":false}],"preferred":false,"id":488646,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Gray, Brian R. 0000-0001-7682-9550 brgray@usgs.gov","orcid":"https://orcid.org/0000-0001-7682-9550","contributorId":2615,"corporation":false,"usgs":true,"family":"Gray","given":"Brian","email":"brgray@usgs.gov","middleInitial":"R.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":488643,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70042726,"text":"sir20125252 - 2013 - Estimates of gains and losses from unmeasured sources and sinks for streamflow and dissolved-solids load in selected reaches of the Arkansas River, southeastern Colorado, 2009-2010","interactions":[],"lastModifiedDate":"2013-01-22T10:20:44","indexId":"sir20125252","displayToPublicDate":"2013-01-22T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2012-5252","title":"Estimates of gains and losses from unmeasured sources and sinks for streamflow and dissolved-solids load in selected reaches of the Arkansas River, southeastern Colorado, 2009-2010","docAbstract":"The Arkansas River is an important municipal water supply and is the primary supply for about 400,000 acres of irrigated land in southeastern Colorado. The suitability of this water for domestic, agricultural, and industrial use is affected by high salinity in parts of the Arkansas River. There is a need to quantify mass loading of dissolved solids (DS) in the Arkansas River. In 2009, the U.S. Geological Survey, in cooperation with the Arkansas River Basin Regional Resource Planning Group and the Colorado Water Conservation Board, began a study to estimate gains and losses from unmeasured sources and sinks for streamflow and DS load in selected reaches of the Arkansas River in southeastern Colorado. Two study reaches were selected for investigation—Canon City to just upstream from Pueblo Reservoir (UARB) and Avondale to Las Animas (LARB). The results from the water-budget analyses indicated that potential areas of unmeasured sources and sinks of streamflow were identifiable in the two study reaches. In the UARB, a substantial volume of water in the subreach from Ark at Canon City to the seasonal gaging station 5 miles downstream (Ark nr Canon City) was unaccounted for by the methodology used in this analysis. The daily gain from unmeasured sources in this subreach was estimated to be about 100 cubic feet per second (ft<sup>3</sup>/s) or about 20 ft<sup>3</sup>/s per river mile. Water-budget estimates for the remaining 18 miles of the UARB study reach indicated that gains or losses from unmeasured sources or sinks were within the measurement error as defined for this report. In the LARB, gains and losses from unmeasured sources and sinks were identified in some of the subreaches but the magnitude of the flux generally was small. Unmeasured sources ranging from less than 2 to 3 ft<sup>3</sup>/s per mile were identified in the river subreaches from Ark at Catlin Dam downstream to Ark at Swink. A streamflow loss was indicated along the subreach from Ark at Nepesta to Ark at Catlin Dam, particularly in 2010. The mechanism and spatial extent of this sink was not identified, and further investigation would be required to better quantify the loss. The results from the analyses of unmeasured sources of DS load indicated that potential source areas were identifiable in the study areas. It might be expected that unmeasured DS load flux would be identified along the same reaches where unmeasured streamflow flux was identified. To that extent, some of the observed results from the analysis of daily DS loading did mirror the streamflow results. In some subreaches of the Arkansas River, however, unmeasured sources and sinks of DS load did not appear to be directly associated with unmeasured sources and sinks of streamflow. In the UARB from Ark at Canon City to Ark nr Canon City, unmeasured gains in DS load were estimated to range from 11 to 22 tons per day per mile in 2009 and from about 8 to 13 tons per day per mile in 2010; streamflow from unmeasured sources was estimated to be about 20 ft<sup>3</sup>/s per mile along this same reach. Downstream from this short reach, DS load to the river from unmeasured sources was estimated to range from 5.4 to 7.6 tons per day per mile in 2010 for Ark nr Canon City to Ark at Portland and from 11 to 16 tons per day per mile in 2009 for Ark at Portland to Ark nr Portland. Unmeasured gains in streamflow were not identified in either of these subreaches. Several small tributaries with DS concentrations ranging from 3,000 mg/L to as high as 6,000 mg/L enter the river along these subreaches. These inputs may indicate a potential source of groundwater that could affect DS loading in the river. Further investigation would be needed to identify the unmeasured source or sources of DS load to determine the nature and extent of unmeasured inputs. In the LARB, gains in DS load from unmeasured sources were identified for the subreach from Ark nr Avondale to Ark at Nepesta, although no substantial amounts of streamflow from unmeasured sources were identified for this subreach. In 2009, the estimated gain in DS load from unmeasured sources for this subreach was 4.7 tons per day per mile. An increase in DS load from unmeasured sources also was identified along the subreach of the river from Ark at Catlin to Swink; the DS load from unmeasured sources was estimated to range from 10 to 28 tons per day per mile. The only loss of DS load was identified for the subreach from Nepesta to Catlin Dam in 2010. The mechanism and spatial extent of the losses were not identified, and further investigation would be required to better understand the results.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20125252","collaboration":"Prepared in cooperation with the City of Aurora, Colorado Springs Utilities, Colorado Water Conservation Board, Lower Arkansas Valley Water Conservancy District, Pueblo Board of Water Works, Southeastern Colorado Water Conservancy District, and Upper Arkansas Water Conservancy District","usgsCitation":"Ortiz, R.F., 2013, Estimates of gains and losses from unmeasured sources and sinks for streamflow and dissolved-solids load in selected reaches of the Arkansas River, southeastern Colorado, 2009-2010: U.S. Geological Survey Scientific Investigations Report 2012-5252, viii, 53 p., https://doi.org/10.3133/sir20125252.","productDescription":"viii, 53 p.","numberOfPages":"64","onlineOnly":"Y","additionalOnlineFiles":"N","temporalStart":"2009-01-01","temporalEnd":"2010-12-31","costCenters":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"links":[{"id":266220,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir_2012_5252.gif"},{"id":266218,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2012/5252/"},{"id":266219,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2012/5252/SIR12-5252.pdf"}],"projection":"Universal Transverse Mercator projection, Zone 13","datum":"North American Datum of 1983","country":"United States","state":"Colorado","county":"Baca;Bent;Chaffee;Cheyenne;Costilla;Crowley;Custer;El Paso;Elbert;Fremont;Huerfano;Kiowa;Lake;Las Animas;Lincoln;Otero;Park;Prowers;Pueblo;Saguache;Teller","otherGeospatial":"Arkansas River","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -107.0,37.0 ], [ -107.0,39.5 ], [ -102.0,39.5 ], [ -102.0,37.0 ], [ -107.0,37.0 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"50fee5cfe4b0fcbbbbab753f","contributors":{"authors":[{"text":"Ortiz, Roderick F. rfortiz@usgs.gov","contributorId":1126,"corporation":false,"usgs":true,"family":"Ortiz","given":"Roderick","email":"rfortiz@usgs.gov","middleInitial":"F.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472119,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70068732,"text":"70068732 - 2013 - Simultaneous estimation of local-scale and flow path-scale dual-domain mass transfer parameters using geoelectrical monitoring","interactions":[],"lastModifiedDate":"2014-01-13T10:27:52","indexId":"70068732","displayToPublicDate":"2013-01-21T10:23:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3722,"text":"Water Resources Research","onlineIssn":"1944-7973","printIssn":"0043-1397","active":true,"publicationSubtype":{"id":10}},"title":"Simultaneous estimation of local-scale and flow path-scale dual-domain mass transfer parameters using geoelectrical monitoring","docAbstract":"Anomalous solute transport, modeled as rate-limited mass transfer, has an observable geoelectrical signature that can be exploited to infer the controlling parameters. Previous experiments indicate the combination of time-lapse geoelectrical and fluid conductivity measurements collected during ionic tracer experiments provides valuable insight into the exchange of solute between mobile and immobile porosity. Here, we use geoelectrical measurements to monitor tracer experiments at a former uranium mill tailings site in Naturita, Colorado. We use nonlinear regression to calibrate dual-domain mass transfer solute-transport models to field data. This method differs from previous approaches by calibrating the model simultaneously to observed fluid conductivity and geoelectrical tracer signals using two parameter scales: effective parameters for the flow path upgradient of the monitoring point and the parameters local to the monitoring point. We use regression statistics to rigorously evaluate the information content and sensitivity of fluid conductivity and geophysical data, demonstrating multiple scales of mass transfer parameters can simultaneously be estimated. Our results show, for the first time, field-scale spatial variability of mass transfer parameters (i.e., exchange-rate coefficient, porosity) between local and upgradient effective parameters; hence our approach provides insight into spatial variability and scaling behavior. Additional synthetic modeling is used to evaluate the scope of applicability of our approach, indicating greater range than earlier work using temporal moments and a Lagrangian-based Damköhler number. The introduced Eulerian-based Damköhler is useful for estimating tracer injection duration needed to evaluate mass transfer exchange rates that range over several orders of magnitude.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Water Resources Research","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Wiley","doi":"10.1002/wrcr.20397","usgsCitation":"Briggs, M., Day-Lewis, F.D., Ong, J.B., Curtis, G.P., and Lane, J.W., 2013, Simultaneous estimation of local-scale and flow path-scale dual-domain mass transfer parameters using geoelectrical monitoring: Water Resources Research, v. 49, no. 9, p. 5615-5630, https://doi.org/10.1002/wrcr.20397.","productDescription":"16 p.","startPage":"5615","endPage":"5630","ipdsId":"IP-045190","costCenters":[{"id":486,"text":"OGW Branch of Geophysics","active":true,"usgs":true}],"links":[{"id":280849,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":280841,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1002/wrcr.20397"}],"volume":"49","issue":"9","noUsgsAuthors":false,"publicationDate":"2013-09-13","publicationStatus":"PW","scienceBaseUri":"53cd72fee4b0b29085108a7c","contributors":{"authors":[{"text":"Briggs, Martin A.","contributorId":10321,"corporation":false,"usgs":true,"family":"Briggs","given":"Martin A.","affiliations":[],"preferred":false,"id":488075,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Day-Lewis, Frederick D. 0000-0003-3526-886X daylewis@usgs.gov","orcid":"https://orcid.org/0000-0003-3526-886X","contributorId":1672,"corporation":false,"usgs":true,"family":"Day-Lewis","given":"Frederick","email":"daylewis@usgs.gov","middleInitial":"D.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":493,"text":"Office of Ground Water","active":true,"usgs":true},{"id":486,"text":"OGW Branch of Geophysics","active":true,"usgs":true}],"preferred":true,"id":488071,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Ong, John B. jbong@usgs.gov","contributorId":5190,"corporation":false,"usgs":true,"family":"Ong","given":"John","email":"jbong@usgs.gov","middleInitial":"B.","affiliations":[],"preferred":true,"id":488074,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Curtis, Gary P. 0000-0003-3975-8882 gpcurtis@usgs.gov","orcid":"https://orcid.org/0000-0003-3975-8882","contributorId":2346,"corporation":false,"usgs":true,"family":"Curtis","given":"Gary","email":"gpcurtis@usgs.gov","middleInitial":"P.","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true}],"preferred":true,"id":488073,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Lane, John W. Jr. jwlane@usgs.gov","contributorId":1738,"corporation":false,"usgs":true,"family":"Lane","given":"John","suffix":"Jr.","email":"jwlane@usgs.gov","middleInitial":"W.","affiliations":[{"id":486,"text":"OGW Branch of Geophysics","active":true,"usgs":true}],"preferred":false,"id":488072,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70042723,"text":"ofr20131022 - 2013 - Information to support to monitoring and habitat restoration on Ash Meadows National Wildlife Refuge","interactions":[],"lastModifiedDate":"2013-01-19T11:57:31","indexId":"ofr20131022","displayToPublicDate":"2013-01-19T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-1022","title":"Information to support to monitoring and habitat restoration on Ash Meadows National Wildlife Refuge","docAbstract":"The Ash Meadows National Wildlife Refuge staff focuses on improving habitat for the highest incidence of endemic species for an area of its size in the continental United States. Attempts are being made to restore habitat to some semblance of its pre-anthropogenic undisturbed condition, and to provide habitat conditions to which native plant and animal species have evolved. Unfortunately, restoring the Ash Meadows’ Oases to its pre-anthropogenic undisturbed condition is almost impossible. First, there are constraints on water manipulation because there are private holdings within the refuge boundary; second, there has been at least one species extinction—the Ash Meadows pool fish (<i>Empetrichthys merriami</i>). It is also quite possible that thermal endemic invertebrate species were lost before ever being described. Perhaps the primary obstacle to restoring Ash Meadows to its pre-anthropogenic undisturbed conditions is the presence of invasive species. However, invasive species, such as red swamp crayfish (<i>Procambarus clarki</i>) and western mosquitofish (<i>Gambusia affinis</i>), are a primary driving force in restoring Ash Meadows’ spring systems, because under certain habitat conditions they can all but replace native species. Returning Ash Meadows’ physical landscape to some semblance of its pre-anthropogenic undisturbed condition through natural processes may take decades. Meanwhile, the natural dissolution of concrete and earthen irrigation channels threatens to allow cattail marshes to flourish instead of spring-brooks immediately downstream of spring discharge. This successional stage favors non-native crayfish and mosquitofish over the native Amargosa pupfish (<i>Cyprinodon nevadensis</i>). Thus, restoration is needed to control non-natives and to promote native species, and without such intervention the probability of native fish reduction or loss, is anticipated. The four studies in this report are intended to provide information for restoring native fish habitat and for monitoring native fish populations in relation to restoration efforts on the Ash Meadows National Wildlife Refuge. There are no precise records on conditions of each of the spring systems prior to anthropogenic alteration; however, fostering conditions that favor native over non-natives will be key to habitat restoration. Information regarding native species carbon source is needed to create habitat that favors native species, thus habitat restoration fostering food stuff consumed by native species should be considered in restoration efforts. In compiling data for the first part of this report, we tracked carbon source for native and non-native species at four stations along the Jackrabbit Spring system. Thus, we were able to contrast carbon source in warm- and cool-water habitats. Habitat in Jackrabbit Spring was improved for native fishes in 2007. The second paper in this report focuses on native fish populations in Jackrabbit Spring system pre- and post-restoration. Much of the Ash Meadows Oases is marsh habitat where non-native red swamp crayfish and western mosquitofish are often abundant, to the detriment of non-natives. Because marsh habitat is broadly represented in the Ash Meadows landscape, establishing marsh habitat most conducive to the native fishes is important to the restoration effort, and the third paper addresses marsh habitat type with the relative abundance of fishes and crayfish. There are previous years of monitoring Ash Meadows’ native fish populations, but not all monitoring occurred at the same time of year. Desert-fish populations sometimes undergo seasonal fluctuation, so it might not be valid to compare population trends using difference seasons. For report four, we tracked a closed population of Amargosa pupfish (<i>Cyprinodon nevadensis</i>) year round to track seasonal trends. Knowledge of seasonal trends is important in tracking changes of populations pre- and post-restoration.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20131022","usgsCitation":"Scoppettone, G.G., 2013, Information to support to monitoring and habitat restoration on Ash Meadows National Wildlife Refuge: U.S. Geological Survey Open-File Report 2013-1022, viii, 56 p.; col. ill.; maps (col.), https://doi.org/10.3133/ofr20131022.","productDescription":"viii, 56 p.; col. ill.; maps (col.)","startPage":"i","endPage":"56","numberOfPages":"68","additionalOnlineFiles":"N","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":266019,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ofr_2013_1022.jpg"},{"id":266017,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2013/1022/pdf/ofr20131022.pdf"},{"id":266018,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/of/2013/1022/"}],"country":"United States","state":"Nevada","otherGeospatial":"Ash Meadows National Wildlife Refuge","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -116.324209,36.410509 ], [ -116.324209,36.430513 ], [ -116.304201,36.430513 ], [ -116.304201,36.410509 ], [ -116.324209,36.410509 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"50fbc063e4b09c29612f80b0","contributors":{"authors":[{"text":"Scoppettone, G. Gary","contributorId":61137,"corporation":false,"usgs":true,"family":"Scoppettone","given":"G.","email":"","middleInitial":"Gary","affiliations":[],"preferred":false,"id":472118,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70042698,"text":"sir20125277 - 2013 - Nutrient and sediment concentrations, yields, and loads in impaired streams and rivers in the Taunton River Basin, Massachusetts, 1997-2008","interactions":[],"lastModifiedDate":"2015-09-14T08:20:39","indexId":"sir20125277","displayToPublicDate":"2013-01-18T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2012-5277","title":"Nutrient and sediment concentrations, yields, and loads in impaired streams and rivers in the Taunton River Basin, Massachusetts, 1997-2008","docAbstract":"<p>Rapid development, population growth, and the changes in land and water use accompanying development are placing increasing stress on water resources in the Taunton River Basin. An assessment by the Massachusetts Department of Environmental Protection determined that a number of tributary streams to the Taunton River are impaired for a variety of beneficial uses because of nutrient enrichment. Most of the impaired reaches are in the Matfield River drainage area in the vicinity of the City of Brockton. In addition to impairments of stream reaches in the basin, discharge of nutrient-rich water from the Taunton River contributes to eutrophication of Mount Hope and Narragansett Bays. To assess water quality and loading in the impaired tributary stream reaches in the basin, the U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection compiled existing water-quality data from previous studies for the period 1997-2006, developed and calibrated a Hydrological Simulation Program-FORTRAN (HSPF) precipitation-runoff model to simulate streamflow in areas of the basin that contain the impaired reaches for the same time period, and collected additional streamflow and water-quality data from sites on the Matfield and Taunton Rivers in 2008. A majority of the waterquality samples used in the study were collected between 1999 and 2006. Overall, the concentration, yield, and load data presented in this report represent water-quality conditions in the basin for the period 1997-2008. Water-quality data from 52 unique sites were used in the study. Most of the samples from previous studies were collected between June and September under dry weather conditions. Simulated or measured daily mean streamflow and water-quality data were used to estimate constituent yields and loads in the impaired tributary stream reaches and the main stem of the Taunton River and to develop yield-duration plots for reaches with sufficient water-quality data. Total phosphorus concentrations in the impaired-reach areas ranged from 0.0046 to 0.91 milligrams per liter (mg/L) in individual samples (number of samples (n)=331), with a median of 0.090 mg/L; total nitrogen concentrations ranged from 0.34 to 14 mg/L in individual samples (n=139), with a median of 1.35 mg/L; and total suspended solids concentrations ranged from 2/d) for total phosphorus and 100 lb/mi<sup>2</sup>/d for total nitrogen in these reaches. In most of the impaired reaches not affected by the Brockton Advanced Water Reclamation Facility outfall, yields were lower than in reaches downstream from the outfall, and the difference between measured and threshold yields was fairly uniform over a wide range of flows, suggesting that multiple processes contribute to nonpoint loading in these reaches. The Northeast and Mid-Atlantic SPAtially-Referenced Regression On Watershed (SPARROW) models for total phosphorus and total nitrogen also were used to estimate annual nutrient loads in the impaired tributary stream reaches and main stem of the Taunton River and predict the distribution of these loads among point and diffuse sources in reach drainage areas. SPARROW is a regional, statistical model that relates nutrient loads in streams to upstream sources and land-use characteristics and can be used to make predictions for streams that do not have nutrient-load data. The model predicts mean annual loads based on longterm streamflow and water-quality data and nutrient source conditions for the year 2002. Predicted mean annual nutrient loads from the SPARROW models were consistent with the measured yield and load data from sampling sites in the basin. For conditions in 2002, the Brockton Advanced Water Reclamation Facility outfall accounted for over 75 percent of the total nitrogen load and over 93 percent of the total phosphorus load in the Salisbury Plain and Matfield Rivers downstream from the outfall. Municipal point sources also accounted for most of the load in the main stem of the Taunton River. Multiple municipal wastewater discharges in the basin accounted for about 76 and 46 percent of the delivered loads of total phosphorus and total nitrogen, respectively, to Mount Hope Bay. For similarly sized watersheds, total delivered loads were lower in watersheds without point sources compared to those with point sources, and sources associated with developed land accounted for most of the delivered phosphorus and nitrogen loads to the impaired reaches. The concentration, yield, and load data evaluated in this study may not be representative of current (2012) point-source loading in the basin; in particular, most of the water-quality data used in the study (1999-2006) were collected prior to completion of upgrades to the Brockton Advanced Water Reclamation Facility that reduced total phosphorus and nitrogen concentrations in treated effluent. Effluent concentration data indicate that, for a given flow rate, effluent loads of total phosphorus and total nitrogen declined by about 80 and 30 percent, respectively, between the late 1990s and 2008 in response to plant upgrades. Consequently, current (2012) water-quality conditions in the impaired reaches downstream from the facility likely have improved compared to conditions described in the report.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20125277","collaboration":"Prepared in cooperation with the Massachusetts Department of Environmental Protection, Division of Watershed Management","usgsCitation":"Barbaro, J.R., and Sorenson, J.R., 2013, Nutrient and sediment concentrations, yields, and loads in impaired streams and rivers in the Taunton River Basin, Massachusetts, 1997-2008: U.S. Geological Survey Scientific Investigations Report 2012-5277, Report: ix, 89 p.; Appendix 2, https://doi.org/10.3133/sir20125277.","productDescription":"Report: ix, 89 p.; Appendix 2","numberOfPages":"103","onlineOnly":"Y","additionalOnlineFiles":"Y","costCenters":[],"links":[{"id":265860,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir_2012_5277.gif"},{"id":265859,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2012/5277/appendix/sir2012-5277_appx02_table.xlsx"},{"id":265858,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2012/5277/pdf/sir2012-5277_report_508.pdf"},{"id":265857,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2012/5277/"}],"projection":"Massachusetts state plane projection, mainland zone","datum":"1983 North American datum","country":"United States","state":"Massachusetts","otherGeospatial":"Taunton River Basin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -71.34933471679688,\n              41.67086022030498\n            ],\n            [\n              -71.34933471679688,\n              42.14405981155152\n            ],\n            [\n              -70.71487426757812,\n              42.14405981155152\n            ],\n            [\n              -70.71487426757812,\n              41.67086022030498\n            ],\n            [\n              -71.34933471679688,\n              41.67086022030498\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"50fa6f27e4b061045bf9ab9b","contributors":{"authors":[{"text":"Barbaro, Jeffrey R. 0000-0002-6107-2142 jrbarbar@usgs.gov","orcid":"https://orcid.org/0000-0002-6107-2142","contributorId":1626,"corporation":false,"usgs":true,"family":"Barbaro","given":"Jeffrey","email":"jrbarbar@usgs.gov","middleInitial":"R.","affiliations":[{"id":376,"text":"Massachusetts Water Science Center","active":true,"usgs":true},{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472080,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Sorenson, Jason R. 0000-0001-5553-8594 jsorenso@usgs.gov","orcid":"https://orcid.org/0000-0001-5553-8594","contributorId":3468,"corporation":false,"usgs":true,"family":"Sorenson","given":"Jason","email":"jsorenso@usgs.gov","middleInitial":"R.","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":472081,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
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