{"pageNumber":"656","pageRowStart":"16375","pageSize":"25","recordCount":40804,"records":[{"id":70047748,"text":"70047748 - 2013 - Chemical controls on fault behavior: weakening of serpentinite sheared against quartz-bearing rocks and its significance for fault creep in the San Andreas system","interactions":[],"lastModifiedDate":"2013-08-22T08:16:11","indexId":"70047748","displayToPublicDate":"2013-05-01T08:06:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2314,"text":"Journal of Geophysical Research B: Solid Earth","active":true,"publicationSubtype":{"id":10}},"title":"Chemical controls on fault behavior: weakening of serpentinite sheared against quartz-bearing rocks and its significance for fault creep in the San Andreas system","docAbstract":"The serpentinized ultramafic rocks found in many plate-tectonic settings commonly are juxtaposed against crustal rocks along faults, and the chemical contrast between the rock types potentially could influence the mechanical behavior of such faults.  To investigate this possibility, we conducted triaxial experiments under hydrothermal conditions (200-350&deg;C), shearing serpentinite gouge between forcing blocks of granite or quartzite.  In an ultramafic chemical environment, the coefficient of friction, µ, of lizardite and antigorite serpentinite is 0.5-0.6, and µ increases with increasing temperature over the tested range.  However, when either lizardite or antigorite serpentinite is sheared against granite or quartzite, strength is reduced to µ ~ 0.3, with the greatest strength reductions at the highest temperatures (temperature weakening) and slowest shearing rates (velocity strengthening).  The weakening is attributed to a solution-transfer process that is promoted by the enhanced solubility of serpentine in pore fluids whose chemistry has been modified by interaction with the quartzose wall rocks.  The operation of this process will promote aseismic slip (creep) along serpentinite-bearing crustal faults at otherwise seismogenic depths.  During short-term experiments serpentine minerals reprecipitate in low-stress areas, whereas in longer experiments new Mg-rich phyllosilicates crystallize in response to metasomatic exchanges across the serpentinite-crustal rock contact.  Long-term shear of serpentinite against crustal rocks will cause the metasomatic mineral assemblages, which may include extremely weak minerals such as saponite or talc, to play an increasingly important role in the mechanical behavior of the fault.  Our results may explain the distribution of creep on faults in the San Andreas system.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Journal of Geophysical Research B: Solid Earth","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Wiley","doi":"10.1002/jgrb.50140","usgsCitation":"Moore, D.E., and Lockner, D.A., 2013, Chemical controls on fault behavior: weakening of serpentinite sheared against quartz-bearing rocks and its significance for fault creep in the San Andreas system: Journal of Geophysical Research B: Solid Earth, v. 118, no. 5, p. 2558-2570, https://doi.org/10.1002/jgrb.50140.","productDescription":"13 p.","startPage":"2558","endPage":"2570","numberOfPages":"13","ipdsId":"IP-038378","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":473854,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/jgrb.50140","text":"Publisher Index Page"},{"id":276880,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":276875,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1002/jgrb.50140"}],"country":"United States","state":"California","otherGeospatial":"San Andreas Fault System","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -124.41,32.53 ], [ -124.41,41.12 ], [ -115.25,41.12 ], [ -115.25,32.53 ], [ -124.41,32.53 ] ] ] } } ] }","volume":"118","issue":"5","noUsgsAuthors":false,"publicationDate":"2013-05-28","publicationStatus":"PW","scienceBaseUri":"521732e3e4b043bae8d2e5cb","contributors":{"authors":[{"text":"Moore, Diane E. 0000-0002-8641-1075 dmoore@usgs.gov","orcid":"https://orcid.org/0000-0002-8641-1075","contributorId":2704,"corporation":false,"usgs":true,"family":"Moore","given":"Diane","email":"dmoore@usgs.gov","middleInitial":"E.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":482883,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lockner, David A. 0000-0001-8630-6833 dlockner@usgs.gov","orcid":"https://orcid.org/0000-0001-8630-6833","contributorId":567,"corporation":false,"usgs":true,"family":"Lockner","given":"David","email":"dlockner@usgs.gov","middleInitial":"A.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true},{"id":234,"text":"Earthquake Hazards Program","active":true,"usgs":true}],"preferred":true,"id":482882,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70045736,"text":"sir20135045 - 2013 - Investigations of groundwater system and simulation of regional groundwater flow for North Penn Area 7 Superfund site, Montgomery County, Pennsylvania","interactions":[],"lastModifiedDate":"2015-05-01T08:11:34","indexId":"sir20135045","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-5045","title":"Investigations of groundwater system and simulation of regional groundwater flow for North Penn Area 7 Superfund site, Montgomery County, Pennsylvania","docAbstract":"<p>Groundwater in the vicinity of several industrial facilities in Upper Gwynedd Township and vicinity, Montgomery County, in southeast Pennsylvania has been shown to be contaminated with volatile organic compounds (VOCs), the most common of which is the solvent trichloroethylene (TCE). The 2-square-mile area was placed on the National Priorities List as the North Penn Area 7 Superfund site by the U.S. Environmental Protection Agency (USEPA) in 1989. The U.S. Geological Survey (USGS) conducted geophysical logging, aquifer testing, and water-level monitoring, and measured streamflows in and near North Penn Area 7 from fall 2000 through fall 2006 in a technical assistance study for the USEPA to develop an understanding of the hydrogeologic framework in the area as part of the USEPA Remedial Investigation. In addition, the USGS developed a groundwater-flow computer model based on the hydrogeologic framework to simulate regional groundwater flow and to estimate directions of groundwater flow and pathways of groundwater contaminants. The study area is underlain by Triassic- and Jurassic-age sandstones and shales of the Lockatong Formation and Brunswick Group in the Mesozoic Newark Basin. Regionally, these rocks strike northeast and dip to the northwest. The sequence of rocks form a fractured-sedimentary-rock aquifer that acts as a set of confined to partially confined layers of differing permeabilities. Depth to competent bedrock typically is less than 20 ft below land surface. The aquifer layers are recharged locally by precipitation and discharge locally to streams. The general configuration of the potentiometric surface in the aquifer is similar to topography, except in areas affected by pumping. The headwaters of Wissahickon Creek are nearby, and the stream flows southwest, parallel to strike, to bisect North Penn Area 7. Groundwater is pumped in the vicinity of North Penn Area 7 for industrial use, public supply, and residential supply. Results of field investigations by USGS at the site and results from other studies support, and are consistent with, a conceptual model of a layered leaky aquifer where the dip of the beds has a strong control on hydraulic connections in the groundwater system. Connections within and (or) parallel to bedding tend to be greater than across bedding. Transmissivities of aquifer intervals isolated by packers ranged over three orders of magnitude [from about 2.8 to 2,290 square feet per day (ft<sup>2</sup>/d) or 0.26 to 213 square meters per day (m<sup>2</sup>/d)], did not appear to differ much by mapped geologic unit, but showed some relation to depth being relatively smaller in the shallowest and deepest intervals (0 to 50 ft and more than 250 ft below land surface, respectively) compared to the intermediate depth intervals (50 to 250 ft below land surface) tested. Transmissivities estimated from multiple-observation well aquifer tests ranged from about 700 to 2,300 ft<sup>2</sup>/d (65 to 214 m<sup>2</sup>/d). Results of chemical analyses of water from isolated intervals or monitoring wells open to short sections of the aquifer show vertical differences in concentrations; chloride and silica concentrations generally were greater in shallow intervals than in deeper intervals. Chloride concentrations greater than 100 milligrams per liter (mg/L), combined with distinctive chloride/bromide ratios, indicate a different source of chloride in the western part of North Penn Area 7 than elsewhere in the site. Groundwater flow at a regional scale under steady-state conditions was simulated by use of a numerical model (MODFLOW-2000) for North Penn Area 7 with different layers representing saprolite/highly weathered rock near the surface and unweathered competent bedrock. The sedimentary formations that underlie the study area were modeled using dipping model layers for intermediate and deep zones of unweathered, fractured rock. Horizontal cell model size was 100 meters (m) by 100 meters (328 ft by 328 ft), and model layer thickness ranged from 6 m (19.7 ft) representing shallow weathered rock and saprolite up to 200 m (656 ft) representing deeper dipping bedrock. The model did not include detailed structure to account for local-scale differences in hydraulic properties, with the result that local-scale groundwater flow may not be well simulated. Additional detailed multi-well aquifer tests would be needed to establish the extent of interconnection between intervals at the local scale to address remediation of contamination at each source area. This regional groundwater-flow model was calibrated against measured groundwater levels (1996, 2000, and 2005) and base flow estimated from selected streamflow measurements by use of nonlinear-regression parameter-estimation algorithms to determine hydraulic conductivity and anisotropy of hydraulic conductivity, streambed hydraulic conductivity, and recharge during calibration periods. Results of the simulation using the calibrated regional model indicate that the aquifer appears to be anisotropic where hydraulic conductivity is greatest parallel to the orientation of bedding of the formations underlying the area and least in the cross-bed direction. The maximum hydraulic conductivity is aligned with the average regional strike of the formations, which is &ldquo;subhorizontal&rdquo; in the model because the altitudes of the beds and model cells vary in the strike, as well as dip, direction. Estimated subhorizontal hydraulic conductivities (in strike direction parallel to dipping beds) range from 0.001 to 1.67 meters per day (0.0032 to 5.5 feet per day). The ratio of minimum (dip direction) to maximum (strike direction) subhorizontal hydraulic conductivity ranges from 1/3.1 to 1/8.6, and the ratio of vertical to horizontal hydraulic conductivity ranges from 1/1 to 1/478. However, limited available field data precluded rigorous calibration of vertical anisotropy in the model. Estimated recharge rates corresponding to calibration periods in 1996, 2000, and 2005 are 150, 109, and 124 millimeters per year (5.9, 4.3, and 4.9 inches per year), respectively. The calibrated groundwater-flow model was used to simulate groundwater flow under steady-state conditions during periods of relatively high withdrawals (pumpage) (1990) and relatively low withdrawals (2000 and 2005). Groundwater-flow paths originating from recharge areas near known areas of soil contamination (sources) were simulated. Pumped industrial and production wells captured more groundwater from several of these sources during 1990 than after 1990 when pumping declined or ceased and greater amounts of contaminated groundwater moved away from North Penn Area 7 Superfund site to surrounding areas. Uncertainty in simulated groundwater-flow paths from contaminant sources and contributing areas, resulting from uncertainty in estimated hydraulic properties of the model, was illustrated through Monte Carlo simulations. The effect of uncertainty in the vertical anisotropy was not included in the Monte Carlo simulations. Contributing areas indicating the general configuration of groundwater flow towards production well MG-202 (L-22) in the study area also were simulated for the different time periods; as simulated, the flow paths do not pass through any identified contaminant source in North Penn Area 7. However, contributing areas to wells, such as MG-202, located near many pumped wells are particularly complex and, in some cases, include areas that contribute flow to streams that subsequently recharge the aquifer through stream loss. In these cases, water-quality constituents, including contaminants that are present in surface water may be drawn into the aquifer to nearby pumped wells. Results of a simulated shutdown of well MG-202 under steady-state 2005 conditions showed that the area contributing recharge for nearby production well MG-76 (L-17), when MG-202 is not pumping, shifts downstream and is similar to the area contributing recharge for MG-202 when both wells are pumping. Concentrations of constituents in groundwater samples collected in fall 2005 or spring 2006 were compared to simulated groundwater-flow paths for the year 2005 to provide a qualitative assessment of model results. The observed spatial distribution of selected constituents, including TCE, CFC-11, and CFC-113 in groundwater in 2005 and the chloride/bromide mass ratios in 2006, generally were consistent with the model results of the simulated 2005 groundwater-flow paths at North Penn Area 7, indicating the presence of several separate sources of contaminants within North Penn Area 7.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20135045","collaboration":"Prepared in cooperation with the U.S. Environmental Protection Agency","usgsCitation":"Senior, L.A., and Goode, D., 2013, Investigations of groundwater system and simulation of regional groundwater flow for North Penn Area 7 Superfund site, Montgomery County, Pennsylvania (Version 1: Originally posted April 30, 2013; Version 1.1: April 30, 2015): U.S. Geological Survey Scientific Investigations Report 2013-5045, xii, 95 p., https://doi.org/10.3133/sir20135045.","productDescription":"xii, 95 p.","numberOfPages":"112","onlineOnly":"Y","additionalOnlineFiles":"N","temporalStart":"1990-01-01","temporalEnd":"2006-07-01","costCenters":[{"id":532,"text":"Pennsylvania Water Science Center","active":true,"usgs":true}],"links":[{"id":300001,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir20135045.jpg"},{"id":271689,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2013/5045/"},{"id":271690,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2013/5045/support/sir2013-5045.pdf","text":"Report","size":"14.9 MB","linkFileType":{"id":1,"text":"pdf"},"description":"Report"}],"scale":"24000","projection":"Universal Transverse Mercator, Zone 18","datum":"North American Datum of 1927","country":"United States","state":"Pennsylvania","county":"Montgomery","city":"Upper Gwynedd","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -75.33050537109375,\n              40.17939793281656\n            ],\n            [\n              -75.33050537109375,\n              40.23079086353824\n            ],\n            [\n              -75.23162841796875,\n              40.23079086353824\n            ],\n            [\n              -75.23162841796875,\n              40.17939793281656\n            ],\n            [\n              -75.33050537109375,\n              40.17939793281656\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","edition":"Version 1: Originally posted April 30, 2013; Version 1.1: April 30, 2015","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5543522ee4b0a658d79414af","contributors":{"authors":[{"text":"Senior, Lisa A. 0000-0003-2629-1996 lasenior@usgs.gov","orcid":"https://orcid.org/0000-0003-2629-1996","contributorId":2150,"corporation":false,"usgs":true,"family":"Senior","given":"Lisa","email":"lasenior@usgs.gov","middleInitial":"A.","affiliations":[{"id":532,"text":"Pennsylvania Water Science Center","active":true,"usgs":true}],"preferred":true,"id":478213,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Goode, Daniel J. 0000-0002-8527-2456 djgoode@usgs.gov","orcid":"https://orcid.org/0000-0002-8527-2456","contributorId":2433,"corporation":false,"usgs":true,"family":"Goode","given":"Daniel J.","email":"djgoode@usgs.gov","affiliations":[{"id":532,"text":"Pennsylvania Water Science Center","active":true,"usgs":true}],"preferred":false,"id":478214,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70043407,"text":"70043407 - 2013 - Reevaluation of the Piermont-Frontenac allochthon in the Upper Connecticut Valley: Restoration of a coherent Boundary Mountains–Bronson Hill stratigraphic sequence","interactions":[],"lastModifiedDate":"2013-06-07T15:09:37","indexId":"70043407","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1786,"text":"Geological Society of America Bulletin","active":true,"publicationSubtype":{"id":10}},"title":"Reevaluation of the Piermont-Frontenac allochthon in the Upper Connecticut Valley: Restoration of a coherent Boundary Mountains–Bronson Hill stratigraphic sequence","docAbstract":"The regional extent and mode and time of emplacement of the Piermont-Frontenac allochthon in the Boundary Mountains–Bronson Hill anticlinorium of the Upper Connecticut Valley, New Hampshire–Vermont, are controversial. Moench and coworkers beginning in the 1980s proposed that much of the autochthonous pre–Middle Ordovician section of the anticlinorium was a large allochthon of Silurian to Early Devonian rocks correlated to those near Rangeley, Maine. This ∼200-km-long allochthon was postulated to have been transported westward in the latest Silurian to Early Devonian as a soft-sediment gravity slide on a hypothesized Foster Hill fault. New mapping and U-Pb geochronology do not support this interpretation. The undisputed Rangeley sequence in the Bean Brook slice is different from the disputed sequence in the proposed larger Piermont-Frontenac allochthon, and field evidence for the Foster Hill fault is lacking. At the type locality on Foster Hill, the postulated “fault” is a stratigraphic contact within the Ordovician Ammonoosuc Volcanics. The proposed Foster Hill fault would place the Piermont-Frontenac allochthon over the inverted limb of the Cornish(?) nappe, which includes the Emsian Littleton Formation, thus limiting the alleged submarine slide to post-Emsian time. Mafic dikes of the 419 Ma Comerford Intrusive Complex intrude previously folded strata attributed to the larger Piermont-Frontenac allochthon as well as the autochthonous Albee Formation and Ammonoosuc Volcanics. The Lost Nation pluton intruded and produced hornfels in previously deformed Albee strata. Zircons from an apophysis of the pluton in the hornfels have a thermal ionization mass spectrometry <sup>207</sup>Pb/<sup>206</sup>Pb age of 444.1 ± 2.1 Ma. Tonalite near Bath, New Hampshire, has a zircon sensitive high-resolution ion microprobe <sup>206</sup>Pb/<sup>238</sup>U age of 492.5 ± 7.8 Ma. The tonalite intrudes the Albee Formation, formerly interpreted as the Silurian Perry Mountain Formation of the proposed allochthon. Collectively, these features indicate that the large Piermont-Frontenac allochthon gravity slide of Silurian-Devonian strata, as previously proposed, cannot exist. Allochthonous rocks are restricted to a 25 km<sup>2</sup> klippe, the Bean Brook slice, emplaced by hard-rock thrusting in the post-Emsian Devonian. The Albee Formation, the oldest unit in the study area, is older than the Late Cambrian tonalite at Bath. The correlation and apparent continuity along strike to the northeast of the Albee Formation with the Dead River Formation suggest that the Albee Formation, like the Dead River Formation, is of Ganderian affinity and that the Bronson Hill magmatic arc in the Upper Connecticut Valley was built on Ganderian crust. The Dead River Formation is unconformably overlain by Middle and Upper Ordovician volcanic units; the unconformity is attributed to the pre-Arenig Penobscottian orogeny. Some of the pre-Silurian deformation in the Upper Connecticut Valley may be Penobscottian rather than Taconian. New stratigraphic units defined herein include the pelitic Scarritt Member of the Albee Formation, the Ordovician Washburn Brook Formation consisting of synsedimentary breccia and coticule, chert, and ironstone, and the Devonian–Silurian Sawyer Mountain Formation, probably correlative with the Frontenac Formation. The Partridge Formation is partially coeval with the Ammonoosuc Volcanics.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Geological Society of America Bulletin","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"The Geological Society of America","doi":"10.1130/B30590.1","usgsCitation":"Rankin, D., Tucker, R.D., and Amelin, Y., 2013, Reevaluation of the Piermont-Frontenac allochthon in the Upper Connecticut Valley: Restoration of a coherent Boundary Mountains–Bronson Hill stratigraphic sequence: Geological Society of America Bulletin, v. 125, no. 5-6, p. 998-1024, https://doi.org/10.1130/B30590.1.","productDescription":"27 p.","startPage":"998","endPage":"1024","ipdsId":"IP-035967","costCenters":[{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true}],"links":[{"id":273462,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":273461,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1130/B30590.1"}],"country":"United States","state":"New Hampshire;Vermont","volume":"125","issue":"5-6","noUsgsAuthors":false,"publicationDate":"2012-11-21","publicationStatus":"PW","scienceBaseUri":"51b300e6e4b01368e589e3f8","contributors":{"authors":[{"text":"Rankin, Douglas W. dwrankin@usgs.gov","contributorId":1770,"corporation":false,"usgs":true,"family":"Rankin","given":"Douglas W.","email":"dwrankin@usgs.gov","affiliations":[],"preferred":true,"id":473536,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Tucker, Robert D. 0000-0001-8463-4358 rtucker@usgs.gov","orcid":"https://orcid.org/0000-0001-8463-4358","contributorId":2007,"corporation":false,"usgs":true,"family":"Tucker","given":"Robert","email":"rtucker@usgs.gov","middleInitial":"D.","affiliations":[{"id":243,"text":"Eastern Geology and Paleoclimate Science Center","active":true,"usgs":true}],"preferred":true,"id":473537,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Amelin, Yuri","contributorId":94955,"corporation":false,"usgs":true,"family":"Amelin","given":"Yuri","affiliations":[],"preferred":false,"id":473538,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70045743,"text":"ds709Y - 2013 - Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the Ahankashan mineral district in Afghanistan","interactions":[],"lastModifiedDate":"2013-05-01T21:37:12","indexId":"ds709Y","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":310,"text":"Data Series","code":"DS","onlineIssn":"2327-638X","printIssn":"2327-0271","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"709","chapter":"Y","title":"Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the Ahankashan mineral district in Afghanistan","docAbstract":"The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This part of the DS consists of the locally enhanced ALOS image mosaics for the Ahankashan mineral district, which has copper and gold deposits.\n\nALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420–500 nanometer, nm), green (520–600 nm), red (610–690 nm), and near-infrared (760–890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520–770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency (©JAXA,2007,2008, 2009, 2010),but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement.\n\nThe selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. Therefore, it was necessary to (1) register the 10-m AVNIR multispectral imagery to a well-controlled Landsat image base, (2) mosaic the individual multispectral images into a single image of the entire area of interest, (3) register each panchromatic image to the registered multispectral image base, and (4) mosaic the individual panchromatic images into a single image of the entire area of interest. The two image-registration steps were facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using the SPARKLE logic, which is described in Davis (2006). Each of the four-band images within the resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band's picture element based on the digital values of all picture elements within a 500-m radius. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands).\n\nAll image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area's local zone (41 for Ahankashan) and the WGS84 datum. The final image mosaics were subdivided into five overlapping tiles or quadrants because of the large size of the target area. The five image tiles (or quadrants) for the Ahankashan area are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image.","largerWorkType":{"id":18,"text":"Report"},"largerWorkTitle":"Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan (DS 709)","largerWorkSubtype":{"id":5,"text":"USGS Numbered Series"},"language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ds709Y","collaboration":"Prepared in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations and the Afghanistan Geological Survey","usgsCitation":"Davis, P.A., 2013, Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the Ahankashan mineral district in Afghanistan: U.S. Geological Survey Data Series 709, HTML Document; Readme; 4 Index Maps; 10 Image Files; 10 Metadata; Shapefiles, https://doi.org/10.3133/ds709Y.","productDescription":"HTML Document; Readme; 4 Index Maps; 10 Image Files; 10 Metadata; Shapefiles","onlineOnly":"Y","additionalOnlineFiles":"Y","costCenters":[{"id":387,"text":"Mineral Resources Program","active":true,"usgs":true}],"links":[{"id":271706,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ds709Y.png"},{"id":271700,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/ds/709/y/"},{"id":271701,"type":{"id":20,"text":"Read Me"},"url":"https://pubs.usgs.gov/ds/709/y/1_readme.txt"},{"id":271702,"type":{"id":17,"text":"Plate"},"url":"https://pubs.usgs.gov/ds/709/y/index_maps/index_maps.html"},{"id":271703,"type":{"id":14,"text":"Image"},"url":"https://pubs.usgs.gov/ds/709/y/image_files/image_files.html"},{"id":271704,"type":{"id":16,"text":"Metadata"},"url":"https://pubs.usgs.gov/ds/709/y/metadata/metadata.html"},{"id":271705,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/ds/709/y/shapefiles/shapefiles.html"}],"country":"Afghanistan","otherGeospatial":"Ahankashan Mineral District","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ 60.52,29.38 ], [ 60.52,38.49 ], [ 74.89,38.49 ], [ 74.89,29.38 ], [ 60.52,29.38 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51822b6be4b04bbc6ead2702","contributors":{"editors":[{"text":"Davis, Philip A. pdavis@usgs.gov","contributorId":692,"corporation":false,"usgs":true,"family":"Davis","given":"Philip","email":"pdavis@usgs.gov","middleInitial":"A.","affiliations":[],"preferred":true,"id":509319,"contributorType":{"id":2,"text":"Editors"},"rank":1}],"authors":[{"text":"Davis, Philip A. pdavis@usgs.gov","contributorId":692,"corporation":false,"usgs":true,"family":"Davis","given":"Philip","email":"pdavis@usgs.gov","middleInitial":"A.","affiliations":[],"preferred":true,"id":478226,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70042887,"text":"70042887 - 2013 - Short-term variability of <sup>7</sup>Be atmospheric deposition and watershed response in a Pacific coastal stream, Monterey Bay, California, USA","interactions":[],"lastModifiedDate":"2013-05-10T10:30:22","indexId":"70042887","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2263,"text":"Journal of Environmental Radioactivity","active":true,"publicationSubtype":{"id":10}},"title":"Short-term variability of <sup>7</sup>Be atmospheric deposition and watershed response in a Pacific coastal stream, Monterey Bay, California, USA","docAbstract":"Beryllium-7 is a powerful and commonly used tracer for environmental processes such as watershed sediment provenance, soil erosion, fluvial and nearshore sediment cycling, and atmospheric fallout. However, few studies have quantified temporal or spatial variability of <sup>7</sup>Be accumulation from atmospheric fallout, and parameters that would better define the uses and limitations of this geochemical tracer. We investigated the abundance and variability of <sup>7</sup>Be in atmospheric deposition in both rain events and dry periods, and in stream surface-water samples collected over a ten-month interval at sites near northern Monterey Bay (37°N, 122°W) on the central California coast, a region characterized by a rainy winters, dry summers, and small mountainous streams with flashy hydrology. The range of <sup>7</sup>Be activity in rainwater samples from the main sampling site was 1.3–4.4 Bq L<sup>−1</sup>, with a mean (±standard deviation) of 2.2 ± 0.9 Bq L<sup>−1</sup>, and a volume-weighted average of 2.0 Bq L<sup>−1</sup>. The range of wet atmospheric deposition was 18–188 Bq m<sup>−2</sup> per rain event, with a mean of 72 ± 53 Bq m<sup>−2</sup>. Dry deposition fluxes of <sup>7</sup>Be ranged from less than 0.01 up to 0.45 Bq m<sup>−2</sup> d<sup>−1</sup>, with an estimated dry season deposition of 7 Bq m<sup>−2</sup> month<sup>−1</sup>. Annualized <sup>7</sup>Be atmospheric deposition was approximately 1900 Bq m<sup>−2</sup> yr<sup>−1</sup>, with most deposition via rainwater (>95%) and little via dry deposition. Overall, these activities and deposition fluxes are similar to values found in other coastal locations with comparable latitude and Mediterranean-type climate. Particulate <sup>7</sup>Be values in the surface water of the San Lorenzo River in Santa Cruz, California, ranged from <0.01 Bq g<sup>−1</sup> to 0.6 Bq g<sup>−1</sup>, with a median activity of 0.26 Bq g<sup>−1</sup>. A large storm event in January 2010 characterized by prolonged flooding resulted in the entrainment of <sup>7</sup>Be-depleted sediment, presumably from substantial erosion in the watershed. There were too few particulate <sup>7</sup>Be data over the storm to accurately model a <sup>7</sup>Be load, but the results suggest enhanced watershed export of <sup>7</sup>Be from small, mountainous river systems compared to other watershed types.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Journal of Environmental Radioactivity","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Elsevier","doi":"10.1016/j.jenvrad.2013.02.004","usgsCitation":"Conaway, C., Storlazzi, C., Draut, A.E., and Swarzenski, P.W., 2013, Short-term variability of <sup>7</sup>Be atmospheric deposition and watershed response in a Pacific coastal stream, Monterey Bay, California, USA: Journal of Environmental Radioactivity, v. 120, p. 94-103, https://doi.org/10.1016/j.jenvrad.2013.02.004.","startPage":"94","endPage":"103","numberOfPages":"10","ipdsId":"IP-041747","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":272171,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":272170,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1016/j.jenvrad.2013.02.004"}],"country":"United States","state":"California","otherGeospatial":"Monterey Bay;San Lorenzo River","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -122.3,36.9 ], [ -122.3,37.3 ], [ -122.9,37.3 ], [ -122.9,36.9 ], [ -122.3,36.9 ] ] ] } } ] }","volume":"120","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"518e16e1e4b05ebc8f7cc2ff","contributors":{"authors":[{"text":"Conaway, Christopher H.","contributorId":52620,"corporation":false,"usgs":true,"family":"Conaway","given":"Christopher H.","affiliations":[],"preferred":false,"id":472506,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Storlazzi, Curt D. 0000-0001-8057-4490","orcid":"https://orcid.org/0000-0001-8057-4490","contributorId":77889,"corporation":false,"usgs":true,"family":"Storlazzi","given":"Curt D.","affiliations":[],"preferred":false,"id":472507,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Draut, Amy E.","contributorId":92215,"corporation":false,"usgs":true,"family":"Draut","given":"Amy","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":472508,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Swarzenski, Peter W. 0000-0003-0116-0578 pswarzen@usgs.gov","orcid":"https://orcid.org/0000-0003-0116-0578","contributorId":1070,"corporation":false,"usgs":true,"family":"Swarzenski","given":"Peter","email":"pswarzen@usgs.gov","middleInitial":"W.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":472505,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70045745,"text":"ds709BB - 2013 - Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the North Bamyan mineral district in Afghanistan","interactions":[],"lastModifiedDate":"2013-05-01T22:02:40","indexId":"ds709BB","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":310,"text":"Data Series","code":"DS","onlineIssn":"2327-638X","printIssn":"2327-0271","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"709","chapter":"BB","title":"Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the North Bamyan mineral district in Afghanistan","docAbstract":"The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This part of the DS consists of the locally enhanced ALOS image mosaics for the North Bamyan mineral district, which has copper deposits.\n\nALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420–500 nanometer, nm), green (520–600 nm), red (610–690 nm), and near-infrared (760–890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520–770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency (©JAXA,2006,2007, 2008), but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement.\n\nThe selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. Therefore, it was necessary to (1) register the 10-m AVNIR multispectral imagery to a well-controlled Landsat image base, (2) mosaic the individual multispectral images into a single image of the entire area of interest, (3) register each panchromatic image to the registered multispectral image base, and (4) mosaic the individual panchromatic images into a single image of the entire area of interest. The two image-registration steps were facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using the SPARKLE logic, which is described in Davis (2006). Each of the four-band images within the resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band's picture element based on the digital values of all picture elements within a 500-m radius. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands).\n\nAll image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area's local zone (42 for North Bamyan) and the WGS84 datum. The final image mosaics were subdivided into two overlapping tiles or quadrants because of the large size of the target area. The two image tiles (or quadrants) for the North Bamyan area are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image.","largerWorkType":{"id":18,"text":"Report"},"largerWorkTitle":"Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan (DS 709)","largerWorkSubtype":{"id":5,"text":"USGS Numbered Series"},"language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ds709BB","collaboration":"Prepared in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations and the Afghanistan Geological Survey","usgsCitation":"Davis, P.A., 2013, Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the North Bamyan mineral district in Afghanistan: U.S. Geological Survey Data Series 709, HTML Document; Readme; 4 Index Maps; 4 Image Files; 4 Metadata; Shapefiles, https://doi.org/10.3133/ds709BB.","productDescription":"HTML Document; Readme; 4 Index Maps; 4 Image Files; 4 Metadata; Shapefiles","onlineOnly":"Y","additionalOnlineFiles":"Y","costCenters":[{"id":387,"text":"Mineral Resources Program","active":true,"usgs":true}],"links":[{"id":271720,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ds709BB.jpg"},{"id":271716,"type":{"id":17,"text":"Plate"},"url":"https://pubs.usgs.gov/ds/709/bb/index_maps/index_maps.html"},{"id":271717,"type":{"id":14,"text":"Image"},"url":"https://pubs.usgs.gov/ds/709/bb/image_files/image_files.html"},{"id":271718,"type":{"id":16,"text":"Metadata"},"url":"https://pubs.usgs.gov/ds/709/bb/metadata/metadata.html"},{"id":271719,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/ds/709/bb/shapefiles/shapefiles.html"},{"id":271714,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/ds/709/bb/"},{"id":271715,"type":{"id":20,"text":"Read Me"},"url":"https://pubs.usgs.gov/ds/709/bb/1_readme.txt"}],"country":"Afghanistan","otherGeospatial":"North Bamyan Mineral District","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ 60.52,29.38 ], [ 60.52,38.49 ], [ 74.89,38.49 ], [ 74.89,29.38 ], [ 60.52,29.38 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51822b6ce4b04bbc6ead2706","contributors":{"editors":[{"text":"Davis, Philip A. pdavis@usgs.gov","contributorId":692,"corporation":false,"usgs":true,"family":"Davis","given":"Philip","email":"pdavis@usgs.gov","middleInitial":"A.","affiliations":[],"preferred":true,"id":509321,"contributorType":{"id":2,"text":"Editors"},"rank":1}],"authors":[{"text":"Davis, Philip A. pdavis@usgs.gov","contributorId":692,"corporation":false,"usgs":true,"family":"Davis","given":"Philip","email":"pdavis@usgs.gov","middleInitial":"A.","affiliations":[],"preferred":true,"id":478228,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70045744,"text":"ds709AA - 2013 - Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the South Bamyan mineral district in Afghanistan","interactions":[],"lastModifiedDate":"2013-05-01T21:52:05","indexId":"ds709AA","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":310,"text":"Data Series","code":"DS","onlineIssn":"2327-638X","printIssn":"2327-0271","active":false,"publicationSubtype":{"id":5}},"seriesNumber":"709","chapter":"AA","title":"Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the South Bamyan mineral district in Afghanistan","docAbstract":"The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the areas and (2) provide useful information to private investors who are considering investment in a particular area for development of its natural resources. The set of satellite-image mosaics provided in this Data Series (DS) is one such database. Although airborne digital color-infrared imagery was acquired for parts of Afghanistan in 2006, the image data have radiometric variations that preclude their use in creating a consistent image mosaic for geologic analysis. Consequently, image mosaics were created using ALOS (Advanced Land Observation Satellite; renamed Daichi) satellite images, whose radiometry has been well determined (Saunier, 2007a,b). This part of the DS consists of the locally enhanced ALOS image mosaics for the South Bamyan mineral district, which has areas with a spectral reflectance anomaly that require field investigation.\n\nALOS was launched on January 24, 2006, and provides multispectral images from the AVNIR (Advanced Visible and Near-Infrared Radiometer) sensor in blue (420–500 nanometer, nm), green (520–600 nm), red (610–690 nm), and near-infrared (760–890 nm) wavelength bands with an 8-bit dynamic range and a 10-meter (m) ground resolution. The satellite also provides a panchromatic band image from the PRISM (Panchromatic Remote-sensing Instrument for Stereo Mapping) sensor (520–770 nm) with the same dynamic range but a 2.5-m ground resolution. The image products in this DS incorporate copyrighted data provided by the Japan Aerospace Exploration Agency (©JAXA,2006,2007, 2008),but the image processing has altered the original pixel structure and all image values of the JAXA ALOS data, such that original image values cannot be recreated from this DS. As such, the DS products match JAXA criteria for value added products, which are not copyrighted, according to the ALOS end-user license agreement.\n\nThe selection criteria for the satellite imagery used in our mosaics were images having (1) the highest solar-elevation angles (near summer solstice) and (2) the least cloud, cloud-shadow, and snow cover. The multispectral and panchromatic data were orthorectified with ALOS satellite ephemeris data, a process which is not as accurate as orthorectification using digital elevation models (DEMs); however, the ALOS processing center did not have a precise DEM. As a result, the multispectral and panchromatic image pairs were generally not well registered to the surface and not coregistered well enough to perform resolution enhancement on the multispectral data. Therefore, it was necessary to (1) register the 10-m AVNIR multispectral imagery to a well-controlled Landsat image base, (2) mosaic the individual multispectral images into a single image of the entire area of interest, (3) register each panchromatic image to the registered multispectral image base, and (4) mosaic the individual panchromatic images into a single image of the entire area of interest. The two image-registration steps were facilitated using an automated control-point algorithm developed by the USGS that allows image coregistration to within one picture element. Before rectification, the multispectral and panchromatic images were converted to radiance values and then to relative-reflectance values using the methods described in Davis (2006). Mosaicking the multispectral or panchromatic images started with the image with the highest sun-elevation angle and the least atmospheric scattering, which was treated as the standard image. The band-reflectance values of all other multispectral or panchromatic images within the area were sequentially adjusted to that of the standard image by determining band-reflectance correspondence between overlapping images using linear least-squares analysis. The resolution of the multispectral image mosaic was then increased to that of the panchromatic image mosaic using the SPARKLE logic, which is described in Davis (2006). Each of the four-band images within the resolution-enhanced image mosaic was individually subjected to a local-area histogram stretch algorithm (described in Davis, 2007), which stretches each band's picture element based on the digital values of all picture elements within a 500-m radius. The final databases, which are provided in this DS, are three-band, color-composite images of the local-area-enhanced, natural-color data (the blue, green, and red wavelength bands) and color-infrared data (the green, red, and near-infrared wavelength bands).\n\nAll image data were initially projected and maintained in Universal Transverse Mercator (UTM) map projection using the target area's local zone (42 for South Bamyan) and the WGS84 datum. The final image mosaics for the South Bamyan area are provided as embedded geotiff images, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image.","largerWorkType":{"id":18,"text":"Report"},"largerWorkTitle":"Local-area-enhanced, high-resolution natural-color and color-infrared satellite-image mosaics of mineral districts in Afghanistan (DS 709)","largerWorkSubtype":{"id":5,"text":"USGS Numbered Series"},"language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ds709AA","collaboration":"Prepared in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations and the Afghanistan Geological Survey","usgsCitation":"Davis, P.A., 2013, Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the South Bamyan mineral district in Afghanistan: U.S. Geological Survey Data Series 709, HTML Document; Readme; 4 Index Maps; 2 Image Files; 2 Metadata; Shapefiles, https://doi.org/10.3133/ds709AA.","productDescription":"HTML Document; Readme; 4 Index Maps; 2 Image Files; 2 Metadata; Shapefiles","onlineOnly":"Y","additionalOnlineFiles":"Y","costCenters":[{"id":387,"text":"Mineral Resources Program","active":true,"usgs":true}],"links":[{"id":271713,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/ds709AA.png"},{"id":271709,"type":{"id":17,"text":"Plate"},"url":"https://pubs.usgs.gov/ds/709/aa/index_maps/index_maps.html"},{"id":271710,"type":{"id":14,"text":"Image"},"url":"https://pubs.usgs.gov/ds/709/aa/image_files/image_files.html"},{"id":271711,"type":{"id":16,"text":"Metadata"},"url":"https://pubs.usgs.gov/ds/709/aa/metadata/metadata.html"},{"id":271712,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/ds/709/aa/shapefiles/shapefiles.html"},{"id":271707,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/ds/709/aa/"},{"id":271708,"type":{"id":20,"text":"Read Me"},"url":"https://pubs.usgs.gov/ds/709/aa/1_readme.txt"}],"country":"Afghanistan","otherGeospatial":"South Bamyan Mineral District","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ 60.52,29.38 ], [ 60.52,38.49 ], [ 74.89,38.49 ], [ 74.89,29.38 ], [ 60.52,29.38 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51822b6ce4b04bbc6ead270a","contributors":{"editors":[{"text":"Davis, Philip A. pdavis@usgs.gov","contributorId":692,"corporation":false,"usgs":true,"family":"Davis","given":"Philip","email":"pdavis@usgs.gov","middleInitial":"A.","affiliations":[],"preferred":true,"id":509320,"contributorType":{"id":2,"text":"Editors"},"rank":1}],"authors":[{"text":"Davis, Philip A. pdavis@usgs.gov","contributorId":692,"corporation":false,"usgs":true,"family":"Davis","given":"Philip","email":"pdavis@usgs.gov","middleInitial":"A.","affiliations":[],"preferred":true,"id":478227,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70045741,"text":"sir20135024 - 2013 - Estimated rates of groundwater recharge to the Chicot, Evangeline and Jasper aquifers by using environmental tracers in Montgomery and adjacent counties, Texas, 2008 and 2011","interactions":[],"lastModifiedDate":"2016-08-05T14:04:03","indexId":"sir20135024","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-5024","title":"Estimated rates of groundwater recharge to the Chicot, Evangeline and Jasper aquifers by using environmental tracers in Montgomery and adjacent counties, Texas, 2008 and 2011","docAbstract":"<p>Montgomery County is in the northern part of the Houston, Texas, metropolitan area, the fourth most populous metropolitan area in the United States. As populations have increased since the 1980s, groundwater has become an important resource for public-water supply and industry in the rapidly growing area of Montgomery County. Groundwater availability from the Gulf Coast aquifer system is a primary concern for water managers and community planners in Montgomery County and requires a better understanding of the rate of recharge to the system. The Gulf Coast aquifer system in Montgomery County consists of the Chicot, Evangeline, and Jasper aquifers, the Burkeville confining unit, and underlying Catahoula confining system. The individual sand and clay sequences of the aquifers composing the Gulf Coast aquifer system are not laterally or vertically continuous on a regional scale; however, on a local scale, individual sand and clay lenses can extend over several miles. The U.S. Geological Survey, in cooperation with the Lone Star Groundwater Conservation District, collected groundwater-quality samples from selected wells within or near Montgomery County in 2008 and analyzed these samples for concentrations of chlorofluorocarbons (CFCs), sulfur hexafluoride (SF<sub>6</sub>), tritium (3H), helium-3/tritium (<sup>3</sup>He/<sup>3</sup>H), helium-4 (<sup>4</sup>He), and dissolved gases (DG) that include argon, carbon dioxide, methane, nitrogen and oxygen. Groundwater ages, or apparent age, representing residence times since time of recharge, were determined by using the assumption of a piston-flow transport model. Most of the environmental tracer data indicated the groundwater was recharged prior to the 1950s, limiting the usefulness of CFCs, SF<sub>6</sub>, and <sup>3</sup>H concentrations as tracers. In many cases, no tracer was usable at a well for the purpose of estimating an apparent age. Wells not usable for estimating an apparent age were resampled in 2011 and analyzed for concentrations of major ions and carbon-14 (<sup>14</sup>C). At six of these wells, additional <sup>4</sup>He and DG samples were collected and analyzed.</p>\n<p>Recharge rates estimated from environmental tracer data are dependent upon several hydrogeologic variables and have inherent uncertainties. By using the recharge estimates derived from samples collected from 14 wells completed in the Chicot aquifer for which apparent groundwater ages could be determined, recharge to the Chicot aquifer ranged from 0.2 to 7.2 inches (in.) per year (yr). Based on data from one well, estimated recharge to the unconfined zone of the Evangeline aquifer (outcrop) was 0.1 in./yr. Based on data collected from eight wells, estimated rates of recharge to the confined zone of the Evangeline aquifer ranged from less than 0.1 to 2.8 in./yr. Based on data from one well, estimated recharge to the unconfined zone of the Jasper aquifer (outcrop) was 0.5 in./yr. Based on data collected from nine wells, estimated rates of recharge to the confined zone of the Jasper aquifer ranged from less than 0.1 to 0.1 in./yr. The complexity of the hydrogeology in the area, uncertainty in the conceptual model, and numerical assumptions required in the determination of the recharge rates all pose limitations and need to be considered when evaluating these data on a countywide or regional scale. The estimated recharge rates calculated for this study are specific to each well location and should not be extrapolated or inferred as a countywide average. Local variations in the hydrogeology and surficial conditions can affect the recharge rate at a local scale.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20135024","collaboration":"Prepared in cooperation with the Lone Star Groundwater Conservation District","usgsCitation":"Oden, T., and Truini, M., 2013, Estimated rates of groundwater recharge to the Chicot, Evangeline and Jasper aquifers by using environmental tracers in Montgomery and adjacent counties, Texas, 2008 and 2011: U.S. Geological Survey Scientific Investigations Report 2013-5024, Document: viii, 50 p.; Appendixes 1-5, https://doi.org/10.3133/sir20135024.","productDescription":"Document: viii, 50 p.; Appendixes 1-5","numberOfPages":"61","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-042849","costCenters":[{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true}],"links":[{"id":271699,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir20135024.gif"},{"id":271693,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2013/5024/SIR2013-5024.pdf"},{"id":271694,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2013/5024/Appendixes/Appendix%202.xlsx","text":"Appendix 2"},{"id":271695,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2013/5024/Appendixes/Appendix%201.xlsx","text":"Appendix 1"},{"id":271692,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2013/5024/"},{"id":271696,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2013/5024/Appendixes/Appendix%203.pdf","text":"Appendix 3"},{"id":271697,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2013/5024/Appendixes/Appendix%204.xlsx","text":"Appendix 4"},{"id":271698,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2013/5024/Appendixes/Appendix%205.xlsx","text":"Appendix 5"}],"country":"United States","state":"Texas","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -106.6,25.8 ], [ -106.6,36.5 ], [ -93.5,36.5 ], [ -93.5,25.8 ], [ -106.6,25.8 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"51822b53e4b04bbc6ead26f6","contributors":{"authors":[{"text":"Oden, Timothy D. toden@usgs.gov","contributorId":1284,"corporation":false,"usgs":true,"family":"Oden","given":"Timothy D.","email":"toden@usgs.gov","affiliations":[],"preferred":true,"id":478225,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Truini, Margot mtruini@usgs.gov","contributorId":599,"corporation":false,"usgs":true,"family":"Truini","given":"Margot","email":"mtruini@usgs.gov","affiliations":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"preferred":true,"id":478224,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70134601,"text":"70134601 - 2013 - Method- and species-specific detection probabilities of fish occupancy in Arctic lakes: Implications for design and management","interactions":[],"lastModifiedDate":"2014-12-03T11:04:32","indexId":"70134601","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1169,"text":"Canadian Journal of Fisheries and Aquatic Sciences","active":true,"publicationSubtype":{"id":10}},"title":"Method- and species-specific detection probabilities of fish occupancy in Arctic lakes: Implications for design and management","docAbstract":"<p>Studies examining species occurrence often fail to account for false absences in field sampling. We investigate detection probabilities of five gear types for six fish species in a sample of lakes on the North Slope, Alaska. We used an occupancy modeling approach to provide estimates of detection probabilities for each method. Variation in gear- and species-specific detection probability was considerable. For example, detection probabilities for the fyke net ranged from 0.82 (SE = 0.05) for least cisco (<em>Coregonus sardinella</em>) to 0.04 (SE = 0.01) for slimy sculpin (<em>Cottus cognatus</em>). Detection probabilities were also affected by site-specific variables such as depth of the lake, year, day of sampling, and lake connection to a stream. With the exception of the dip net and shore minnow traps, each gear type provided the highest detection probability of at least one species. Results suggest that a multimethod approach may be most effective when attempting to sample the entire fish community of Arctic lakes. Detection probability estimates will be useful for designing optimal fish sampling and monitoring protocols in Arctic lakes.</p>","language":"English","publisher":"NRC Research Press","doi":"10.1139/cjfas-2012-0527","usgsCitation":"Haynes, T.B., Rosenberger, A.E., Lindberg, M., Whitman, M., and Schmutz, J.A., 2013, Method- and species-specific detection probabilities of fish occupancy in Arctic lakes: Implications for design and management: Canadian Journal of Fisheries and Aquatic Sciences, v. 70, no. 7, p. 1055-1062, https://doi.org/10.1139/cjfas-2012-0527.","productDescription":"8 p.","startPage":"1055","endPage":"1062","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-045099","costCenters":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"links":[{"id":296409,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","otherGeospatial":"North Slope","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -141.328125,\n              71.63599288330606\n            ],\n            [\n              -141.6796875,\n              58.81374171570782\n            ],\n            [\n              -178.2421875,\n              50.62507306341435\n            ],\n            [\n              -165.76171875,\n              71.69129271863999\n            ],\n            [\n              -141.328125,\n              71.63599288330606\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"70","issue":"7","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"54803428e4b0ac64d148dceb","contributors":{"authors":[{"text":"Haynes, Trevor B.","contributorId":100302,"corporation":false,"usgs":false,"family":"Haynes","given":"Trevor","email":"","middleInitial":"B.","affiliations":[{"id":6752,"text":"University of Alaska Fairbanks","active":true,"usgs":false}],"preferred":false,"id":526252,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rosenberger, Amanda E. 0000-0002-5520-8349 arosenberger@usgs.gov","orcid":"https://orcid.org/0000-0002-5520-8349","contributorId":5581,"corporation":false,"usgs":true,"family":"Rosenberger","given":"Amanda","email":"arosenberger@usgs.gov","middleInitial":"E.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true},{"id":396,"text":"Missouri Water Science Center","active":true,"usgs":true}],"preferred":true,"id":526253,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Lindberg, Mark S.","contributorId":89466,"corporation":false,"usgs":false,"family":"Lindberg","given":"Mark S.","affiliations":[{"id":6752,"text":"University of Alaska Fairbanks","active":true,"usgs":false}],"preferred":false,"id":526254,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Whitman, Matthew","contributorId":19257,"corporation":false,"usgs":false,"family":"Whitman","given":"Matthew","affiliations":[],"preferred":false,"id":526255,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Schmutz, Joel A. 0000-0002-6516-0836 jschmutz@usgs.gov","orcid":"https://orcid.org/0000-0002-6516-0836","contributorId":1805,"corporation":false,"usgs":true,"family":"Schmutz","given":"Joel","email":"jschmutz@usgs.gov","middleInitial":"A.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":526221,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70148138,"text":"70148138 - 2013 - A novel approach to surveying sturgeon using side-scan sonar and occupancy modeling","interactions":[],"lastModifiedDate":"2015-05-27T14:25:37","indexId":"70148138","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2680,"text":"Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science","active":true,"publicationSubtype":{"id":10}},"title":"A novel approach to surveying sturgeon using side-scan sonar and occupancy modeling","docAbstract":"<p><span>Technological advances represent opportunities to enhance and supplement traditional fisheries sampling approaches. One example with growing importance for fisheries research is hydroacoustic technologies such as side-scan sonar. Advantages of side-scan sonar over traditional techniques include the ability to sample large areas efficiently and the potential to survey fish without physical handling-important for species of conservation concern, such as endangered sturgeons. Our objectives were to design an efficient survey methodology for sampling Atlantic Sturgeon&nbsp;</span><i>Acipenser oxyrinchus</i><span>&nbsp;by using side-scan sonar and to developmethods for analyzing these data. In North Carolina and South Carolina, we surveyed six rivers thought to contain varying abundances of sturgeon by using a combination of side-scan sonar, telemetry, and video cameras (i.e., to sample jumping sturgeon). Lower reaches of each river near the saltwater-freshwater interface were surveyed on three occasions (generally successive days), and we used occupancy modeling to analyze these data.We were able to detect sturgeon in five of six rivers by using these methods. Side-scan sonar was effective in detecting sturgeon, with estimated gear-specific detection probabilities ranging from 0.2 to 0.5 and river-specific occupancy estimates (per 2-km river segment) ranging from 0.0 to 0.8. Future extensions of this occupancy modeling framework will involve the use of side-scan sonar data to assess sturgeon habitat and abundance in different river systems.</span></p>","language":"English","publisher":"American Fisheries Society","doi":"10.1080/19425120.2013.816396","usgsCitation":"Flowers, H.J., and Hightower, J.E., 2013, A novel approach to surveying sturgeon using side-scan sonar and occupancy modeling: Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science, v. 5, no. 1, p. 211-223, https://doi.org/10.1080/19425120.2013.816396.","productDescription":"13 p.","startPage":"211","endPage":"223","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-043165","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":473857,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1080/19425120.2013.816396","text":"Publisher Index Page"},{"id":300869,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"North Carolina, South Carolina","otherGeospatial":"Cape Fear River, Edisto River, Neuse River, Pee Dee-Waccamaw River, Roanoke River, Santee River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -77.76123046875,\n              36.53612263184686\n            ],\n            [\n              -78.92578124999999,\n              35.782170703266075\n            ],\n            [\n              -80.123291015625,\n              35.003003395276714\n            ],\n            [\n              -80.91430664062499,\n              34.116352469972746\n            ],\n            [\n              -81.84814453125,\n              33.247875947924385\n            ],\n            [\n              -81.529541015625,\n              33.00866349457558\n            ],\n            [\n              -81.38671875,\n              32.602361666817515\n            ],\n            [\n              -81.112060546875,\n              32.24997445586331\n            ],\n            [\n              -80.85937499999999,\n              31.924192605327708\n            ],\n            [\n              -80.31005859375,\n              32.52828936482526\n            ],\n            [\n              -79.881591796875,\n              32.75032260780972\n            ],\n            [\n              -79.25537109375,\n              33.165145408240285\n            ],\n            [\n              -78.936767578125,\n              33.669496972795535\n            ],\n            [\n              -78.06884765624999,\n              33.93424531117312\n            ],\n            [\n              -77.82714843749999,\n              34.1890858311724\n            ],\n            [\n              -77.266845703125,\n              34.63320791137959\n            ],\n            [\n              -76.53076171875,\n              34.687427949314845\n            ],\n            [\n              -76.0693359375,\n              35.074964853989556\n            ],\n            [\n              -75.509033203125,\n              35.28150065789119\n            ],\n            [\n              -75.552978515625,\n              35.84453450421662\n            ],\n            [\n              -75.882568359375,\n              36.56260003738548\n            ],\n            [\n              -77.76123046875,\n              36.53612263184686\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"5","issue":"1","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationDate":"2013-09-19","publicationStatus":"PW","scienceBaseUri":"5566eab3e4b0d9246a9ec2ca","contributors":{"authors":[{"text":"Flowers, H. Jared","contributorId":140974,"corporation":false,"usgs":false,"family":"Flowers","given":"H.","email":"","middleInitial":"Jared","affiliations":[],"preferred":false,"id":547784,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hightower, Joseph E. jhightower@usgs.gov","contributorId":835,"corporation":false,"usgs":true,"family":"Hightower","given":"Joseph","email":"jhightower@usgs.gov","middleInitial":"E.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":547467,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70189218,"text":"70189218 - 2013 - Colloid transport in saturated porous media: Elimination of attachment efficiency in a new colloid transport model","interactions":[],"lastModifiedDate":"2018-04-02T16:50:16","indexId":"70189218","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3722,"text":"Water Resources Research","onlineIssn":"1944-7973","printIssn":"0043-1397","active":true,"publicationSubtype":{"id":10}},"title":"Colloid transport in saturated porous media: Elimination of attachment efficiency in a new colloid transport model","docAbstract":"<p><span>A colloid transport model is introduced that is conceptually simple yet captures the essential features of colloid transport and retention in saturated porous media when colloid retention is dominated by the secondary minimum because an electrostatic barrier inhibits substantial deposition in the primary minimum. This model is based on conventional colloid filtration theory (CFT) but eliminates the empirical concept of attachment efficiency. The colloid deposition rate is computed directly from CFT by assuming all predicted interceptions of colloids by collectors result in at least temporary deposition in the secondary minimum. Also, a new paradigm for colloid re-entrainment based on colloid population heterogeneity is introduced. To accomplish this, the initial colloid population is divided into two fractions. One fraction, by virtue of physiochemical characteristics (e.g., size and charge), will always be re-entrained after capture in a secondary minimum. The remaining fraction of colloids, again as a result of physiochemical characteristics, will be retained “irreversibly” when captured by a secondary minimum. Assuming the dispersion coefficient can be estimated from tracer behavior, this model has only two fitting parameters: (1) the fraction of the initial colloid population that will be retained “irreversibly” upon interception by a secondary minimum, and (2) the rate at which reversibly retained colloids leave the secondary minimum. These two parameters were correlated to the depth of the Derjaguin-Landau-Verwey-Overbeek (DLVO) secondary energy minimum and pore-water velocity, two physical forces that influence colloid transport. Given this correlation, the model serves as a heuristic tool for exploring the influence of physical parameters such as surface potential and fluid velocity on colloid transport.</span></p>","language":"English","publisher":"AGU","doi":"10.1002/wrcr.20195","usgsCitation":"Landkamer, L.L., Harvey, R.W., Scheibe, T.D., and Ryan, J.N., 2013, Colloid transport in saturated porous media: Elimination of attachment efficiency in a new colloid transport model: Water Resources Research, v. 49, no. 5, p. 2952-2965, https://doi.org/10.1002/wrcr.20195.","productDescription":"14 p.","startPage":"2952","endPage":"2965","ipdsId":"IP-014563","costCenters":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"links":[{"id":473855,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/wrcr.20195","text":"Publisher Index Page"},{"id":343392,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"49","issue":"5","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2013-05-30","publicationStatus":"PW","scienceBaseUri":"595f4c43e4b0d1f9f057e368","contributors":{"authors":[{"text":"Landkamer, Lee L.","contributorId":65679,"corporation":false,"usgs":true,"family":"Landkamer","given":"Lee","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":703562,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Harvey, Ronald W. 0000-0002-2791-8503 rwharvey@usgs.gov","orcid":"https://orcid.org/0000-0002-2791-8503","contributorId":564,"corporation":false,"usgs":true,"family":"Harvey","given":"Ronald","email":"rwharvey@usgs.gov","middleInitial":"W.","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":703560,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Scheibe, Timothy D.","contributorId":194243,"corporation":false,"usgs":false,"family":"Scheibe","given":"Timothy","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":703563,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Ryan, Joseph N.","contributorId":54290,"corporation":false,"usgs":false,"family":"Ryan","given":"Joseph","email":"","middleInitial":"N.","affiliations":[{"id":604,"text":"University of Colorado- Boulder","active":false,"usgs":true}],"preferred":false,"id":703561,"contributorType":{"id":1,"text":"Authors"},"rank":13}]}}
,{"id":70187305,"text":"70187305 - 2013 - Assessing the potential of reservoir outflow management to reduce sedimentation using continuous turbidity monitoring and reservoir modelling","interactions":[],"lastModifiedDate":"2017-04-27T14:31:57","indexId":"70187305","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1924,"text":"Hydrological Processes","active":true,"publicationSubtype":{"id":10}},"title":"Assessing the potential of reservoir outflow management to reduce sedimentation using continuous turbidity monitoring and reservoir modelling","docAbstract":"<p><span>In-stream sensors are increasingly deployed as part of ambient water quality-monitoring networks. Temporally dense data from these networks can be used to better understand the transport of constituents through streams, lakes or reservoirs. Data from existing, continuously recording in-stream flow and water quality monitoring stations were coupled with the two-dimensional hydrodynamic CE-QUAL-W2 model to assess the potential of altered reservoir outflow management to reduce sediment trapping in John Redmond Reservoir, located in east-central Kansas. Monitoring stations upstream and downstream from the reservoir were used to estimate 5.6 million metric tons of sediment transported to John Redmond Reservoir from 2007 through 2010, 88% of which was trapped within the reservoir. The two-dimensional model was used to estimate the residence time of 55 equal-volume releases from the reservoir; sediment trapping for these releases varied from 48% to 97%. Smaller trapping efficiencies were observed when the reservoir was maintained near the normal operating capacity (relative to higher flood pool levels) and when average residence times were relatively short. An idealized, alternative outflow management scenario was constructed, which minimized reservoir elevations and the length of time water was in the reservoir, while continuing to meet downstream flood control end points identified in the reservoir water control manual. The alternative scenario is projected to reduce sediment trapping in the reservoir by approximately 3%, preventing approximately 45 000 metric tons of sediment from being deposited within the reservoir annually. This article presents an approach to quantify the potential of reservoir management using existing in-stream data; actual management decisions need to consider the effects on other reservoir benefits, such as downstream flood control and aquatic life. </span></p>","language":"English","publisher":"Wiley","doi":"10.1002/hyp.9284","usgsCitation":"Lee, C.J., and Foster, G.M., 2013, Assessing the potential of reservoir outflow management to reduce sedimentation using continuous turbidity monitoring and reservoir modelling: Hydrological Processes, v. 27, no. 10, p. 1426-1439, https://doi.org/10.1002/hyp.9284.","productDescription":"14 p.","startPage":"1426","endPage":"1439","ipdsId":"IP-026625","costCenters":[{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true}],"links":[{"id":340523,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"27","issue":"10","noUsgsAuthors":false,"publicationDate":"2012-04-23","publicationStatus":"PW","scienceBaseUri":"59030329e4b0e862d230f753","contributors":{"authors":[{"text":"Lee, Casey J. 0000-0002-5753-2038 cjlee@usgs.gov","orcid":"https://orcid.org/0000-0002-5753-2038","contributorId":2627,"corporation":false,"usgs":true,"family":"Lee","given":"Casey","email":"cjlee@usgs.gov","middleInitial":"J.","affiliations":[{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true},{"id":27111,"text":"National Water Quality Program","active":true,"usgs":true},{"id":37786,"text":"WMA - Observing Systems Division","active":true,"usgs":true}],"preferred":true,"id":693240,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Foster, Guy M. 0000-0002-9581-057X gfoster@usgs.gov","orcid":"https://orcid.org/0000-0002-9581-057X","contributorId":149145,"corporation":false,"usgs":true,"family":"Foster","given":"Guy","email":"gfoster@usgs.gov","middleInitial":"M.","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":693241,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70188365,"text":"70188365 - 2013 - Annual modulation of non-volcanic tremor in northern Cascadia","interactions":[],"lastModifiedDate":"2017-06-07T11:42:08","indexId":"70188365","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2314,"text":"Journal of Geophysical Research B: Solid Earth","active":true,"publicationSubtype":{"id":10}},"title":"Annual modulation of non-volcanic tremor in northern Cascadia","docAbstract":"<p><span>Two catalogs of episodic tremor events in northern Cascadia, one from 2006 to 2012 and the other from 1997 to 2011, reveal two systematic patterns of tremor occurrence in southern Vancouver Island: (1) most individual events tend to occur in the third quarter of the year; (2) the number of events in prolonged episodes (i.e., episodic tremor and slip events), which generally propagate to Vancouver Island from elsewhere along the Cascadia subduction zone, is inversely correlated with the amount of precipitation that occurred in the preceding 2 months. We rationalize these patterns as the product of hydrologic loading of the crust of southern Vancouver Island and the surrounding continental region, superimposed with annual variations from oceanic tidal loading. Loading of the Vancouver Island crust in the winter (when the land surface receives ample precipitation) and unloading in the summer tends to inhibit and enhance downdip shear stress, respectively. Quantitatively, for an annually variable surface load, the predicted stress perturbation depends on mantle viscoelastic rheology. A mechanical model of downdip shear stress on the transition zone beneath Vancouver Island—driven predominantly by the annual hydrologic cycle—is consistent with the 1997–2012 tremor observations, with peak-to-peak downdip shear stress of about 0.4 kPa. This seasonal dependence of tremor occurrence appears to be restricted to southern Vancouver Island because of its unique situation as an elongated narrow-width land mass surrounded by ocean, which permits seasonal perturbations in shear stress at depth.</span></p>","language":"English","publisher":"AGU","doi":"10.1002/jgrb.50181","usgsCitation":"Pollitz, F., Wech, A.G., Kao, H., and Burgmann, R., 2013, Annual modulation of non-volcanic tremor in northern Cascadia: Journal of Geophysical Research B: Solid Earth, v. 118, no. 5, p. 2445-2459, https://doi.org/10.1002/jgrb.50181.","productDescription":"15 p.","startPage":"2445","endPage":"2459","ipdsId":"IP-045029","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":473858,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/jgrb.50181","text":"Publisher Index Page"},{"id":342223,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -128.5400390625,\n              46.28622391806706\n            ],\n            [\n              -121.1572265625,\n              46.28622391806706\n            ],\n            [\n              -121.1572265625,\n              50.958426723359935\n            ],\n            [\n              -128.5400390625,\n              50.958426723359935\n            ],\n            [\n              -128.5400390625,\n              46.28622391806706\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"118","issue":"5","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2013-05-13","publicationStatus":"PW","scienceBaseUri":"593910b4e4b0764e6c5e88e6","contributors":{"authors":[{"text":"Pollitz, Frederick 0000-0002-4060-2706 fpollitz@usgs.gov","orcid":"https://orcid.org/0000-0002-4060-2706","contributorId":139578,"corporation":false,"usgs":true,"family":"Pollitz","given":"Frederick","email":"fpollitz@usgs.gov","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":697410,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wech, Aaron G. 0000-0003-4983-1991 awech@usgs.gov","orcid":"https://orcid.org/0000-0003-4983-1991","contributorId":5344,"corporation":false,"usgs":true,"family":"Wech","given":"Aaron","email":"awech@usgs.gov","middleInitial":"G.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":697411,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Kao, Honn","contributorId":105419,"corporation":false,"usgs":true,"family":"Kao","given":"Honn","email":"","affiliations":[],"preferred":false,"id":697412,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Burgmann, Roland","contributorId":192700,"corporation":false,"usgs":false,"family":"Burgmann","given":"Roland","affiliations":[],"preferred":false,"id":697413,"contributorType":{"id":1,"text":"Authors"},"rank":13}]}}
,{"id":70192154,"text":"70192154 - 2013 - Rupture history of the 2011 M 9 Tohoku Japan earthquake determined from strong‐motion and high‐rate GPS recordings: Subevents radiating energy in different frequency bands","interactions":[],"lastModifiedDate":"2017-10-31T15:16:34","indexId":"70192154","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1135,"text":"Bulletin of the Seismological Society of America","onlineIssn":"1943-3573","printIssn":"0037-1106","active":true,"publicationSubtype":{"id":10}},"title":"Rupture history of the 2011 M 9 Tohoku Japan earthquake determined from strong‐motion and high‐rate GPS recordings: Subevents radiating energy in different frequency bands","docAbstract":"<p><span>Strong‐motion records from KiK‐net and K‐NET, along with 1&nbsp;sample/s Global Positioning System (GPS) records from GEONET, were analyzed to determine the location, timing, and slip of subevents of the&nbsp;</span><strong>M</strong><span>&nbsp;9 2011 Tohoku earthquake. Timing of arrivals on stations along the coast shows that the first subevent was located closer to the coast than subevent (2), which produced the largest slip. A waveform inversion of data from 0 to 0.2&nbsp;Hz indicates that the first subevent primarily ruptured down‐dip and north of the hypocenter and had an<span>&nbsp;</span></span><strong>M</strong><span><span>&nbsp;</span>of 8.5. The areas of this subevent that generated the low (&lt;0.2  Hz) and high (&gt;0.2  Hz) frequency energy are located in the same vicinity. The inversion result for the second subevent (</span><strong>M</strong><span>&nbsp;9.0) has large slip on the shallow part of the fault with peak slip of about 65&nbsp;m above about 25&nbsp;km depth. This slip generated the tsunami. The preferred inversion has initiation of subevent 2 on the shallow portion of the fault so that rupture proceeded down‐dip and mainly to the south. Subevent 2 started about 35&nbsp;s after subevent 1, which allows for the possibility of dynamic triggering from subevent 1. The slip model predicts displacements comparable to those found from ocean‐bottom transducers near the epicenter. At frequencies that most affect tall buildings (0.1–0.5&nbsp;Hz), there is a strong pulse (subevent 3) in the strong‐motion records that arrives after the near‐field ramp from subevent 2. High‐frequency subevent 3 was located down‐dip and south of the high‐slip portion of subevent 2 and was initiated as rupture from subevent 2 proceeded down‐dip. The compact pulse for subevent 3 is modeled with an<span>&nbsp;</span></span><strong>M</strong><span>&nbsp;8.0 source in a 75 by 30&nbsp;km area that ruptured down‐dip and to the south with a high slip velocity, indicating high stress drop.</span></p>","language":"English","publisher":"Seismological Society of America","doi":"10.1785/0120120148","usgsCitation":"Frankel, A.D., 2013, Rupture history of the 2011 M 9 Tohoku Japan earthquake determined from strong‐motion and high‐rate GPS recordings: Subevents radiating energy in different frequency bands: Bulletin of the Seismological Society of America, v. 103, no. 2B, p. 1290-1306, https://doi.org/10.1785/0120120148.","productDescription":"17 p.","startPage":"1290","endPage":"1306","ipdsId":"IP-037700","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":347916,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Japan","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              140,\n              35.5\n            ],\n            [\n              143,\n              35.5\n            ],\n            [\n              143,\n              40\n            ],\n            [\n              140,\n              40\n            ],\n            [\n              140,\n              35.5\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"103","issue":"2B","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2013-05-02","publicationStatus":"PW","scienceBaseUri":"59f98bbde4b0531197afa02f","contributors":{"authors":[{"text":"Frankel, Arthur D. 0000-0001-9119-6106 afrankel@usgs.gov","orcid":"https://orcid.org/0000-0001-9119-6106","contributorId":146285,"corporation":false,"usgs":true,"family":"Frankel","given":"Arthur","email":"afrankel@usgs.gov","middleInitial":"D.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":714469,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70173756,"text":"70173756 - 2013 - Incorporating harvest rates into the sex-age-kill model for white-tailed deer","interactions":[],"lastModifiedDate":"2016-06-08T16:14:05","indexId":"70173756","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2508,"text":"Journal of Wildlife Management","active":true,"publicationSubtype":{"id":10}},"title":"Incorporating harvest rates into the sex-age-kill model for white-tailed deer","docAbstract":"<p><span>Although monitoring population trends is an essential component of game species management, wildlife managers rarely have complete counts of abundance. Often, they rely on population models to monitor population trends. As imperfect representations of real-world populations, models must be rigorously evaluated to be applied appropriately. Previous research has evaluated population models for white-tailed deer (</span><i>Odocoileus virginianus</i><span>); however, the precision and reliability of these models when tested against empirical measures of variability and bias largely is untested. We were able to statistically evaluate the Pennsylvania sex-age-kill (PASAK) population model using realistic error measured using data from 1,131 radiocollared white-tailed deer in Pennsylvania from 2002 to 2008. We used these data and harvest data (number killed, age-sex structure, etc.) to estimate precision of abundance estimates, identify the most efficient harvest data collection with respect to precision of parameter estimates, and evaluate PASAK model robustness to violation of assumptions. Median coefficient of variation (CV) estimates by Wildlife Management Unit, 13.2% in the most recent year, were slightly above benchmarks recommended for managing game species populations. Doubling reporting rates by hunters or doubling the number of deer checked by personnel in the field reduced median CVs to recommended levels. The PASAK model was robust to errors in estimates for adult male harvest rates but was sensitive to errors in subadult male harvest rates, especially in populations with lower harvest rates. In particular, an error in subadult (1.5-yr-old) male harvest rates resulted in the opposite error in subadult male, adult female, and juvenile population estimates. Also, evidence of a greater harvest probability for subadult female deer when compared with adult (&ge;2.5-yr-old) female deer resulted in a 9.5% underestimate of the population using the PASAK model. Because obtaining appropriate sample sizes, by management unit, to estimate harvest rate parameters each year may be too expensive, assumptions of constant annual harvest rates may be necessary. However, if changes in harvest regulations or hunter behavior influence subadult male harvest rates, the PASAK model could provide an unreliable index to population changes.&nbsp;</span></p>","language":"English","publisher":"The Wildlife Society","doi":"10.1002/jwmg.486","usgsCitation":"Norton, A.S., Diefenbach, D.R., Rosenberry, C.S., and Wallingford, B.D., 2013, Incorporating harvest rates into the sex-age-kill model for white-tailed deer: Journal of Wildlife Management, v. 77, no. 3, p. 606-615, https://doi.org/10.1002/jwmg.486.","productDescription":"10 p.","startPage":"606","endPage":"615","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-031059","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":323328,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"77","issue":"3","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2012-12-11","publicationStatus":"PW","scienceBaseUri":"575941ffe4b04f417c2568a4","contributors":{"authors":[{"text":"Norton, Andrew S.","contributorId":171631,"corporation":false,"usgs":false,"family":"Norton","given":"Andrew","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":638133,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Diefenbach, Duane R. 0000-0001-5111-1147 drd11@usgs.gov","orcid":"https://orcid.org/0000-0001-5111-1147","contributorId":5235,"corporation":false,"usgs":true,"family":"Diefenbach","given":"Duane","email":"drd11@usgs.gov","middleInitial":"R.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":638068,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rosenberry, Christopher S.","contributorId":171633,"corporation":false,"usgs":false,"family":"Rosenberry","given":"Christopher","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":638134,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Wallingford, Bret D.","contributorId":171632,"corporation":false,"usgs":false,"family":"Wallingford","given":"Bret","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":638135,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70171356,"text":"70171356 - 2013 - To stock or not to stock? Assessing restoration potential of a remnant American shad spawning run with hatchery supplementation","interactions":[],"lastModifiedDate":"2016-05-30T12:33:02","indexId":"70171356","displayToPublicDate":"2013-05-01T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"To stock or not to stock? Assessing restoration potential of a remnant American shad spawning run with hatchery supplementation","docAbstract":"<p><span>Hatchery supplementation has been widely used as a restoration technique for American Shad&nbsp;</span><i>Alosa sapidissima</i><span>&nbsp;on the East Coast of the USA, but results have been equivocal. In the Penobscot River, Maine, dam removals and other improvements to fish passage will likely reestablish access to the majority of this species&rsquo; historic spawning habitat. Additional efforts being considered include the stocking of larval American Shad. The decision about whether to stock a river system undergoing restoration should be made after evaluating the probability of natural recolonization and examining the costs and benefits of potentially accelerating recovery using a stocking program. However, appropriate evaluation can be confounded by a dearth of information about the starting population size and age structure of the remnant American Shad spawning run in the river. We used the Penobscot River as a case study to assess the theoretical sensitivity of recovery time to either scenario (stocking or not) by building a deterministic model of an American Shad population. This model is based on the best available estimates of size at age, fecundity, rate of iteroparity, and recruitment. Density dependence was imposed, such that the population reached a plateau at an arbitrary recovery goal of 633,000 spawning adults. Stocking had a strong accelerating effect on the time to modeled recovery (as measured by the time to reach 50% of the recovery goal) in the base model, but stocking had diminishing effects with larger population sizes. There is a diminishing return to stocking when the starting population is modestly increased. With a low starting population (a spawning run of 1,000), supplementation with 12 million larvae annually accelerated modeled recovery by 12&nbsp;years. Only a 2-year acceleration was observed if the starting population was 15,000. Such a heuristic model may aid managers in assessing the costs and benefits of stocking by incorporating a structured decision framework.</span></p>","language":"English","publisher":"American Fisheries Society","doi":"10.1080/02755947.2013.763874","usgsCitation":"Bailey, M.M., and Zydlewski, J.D., 2013, To stock or not to stock? Assessing restoration potential of a remnant American shad spawning run with hatchery supplementation: North American Journal of Fisheries Management, v. 33, no. 3, p. 459-467, https://doi.org/10.1080/02755947.2013.763874.","productDescription":"9 p.","startPage":"459","endPage":"467","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-034521","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":321851,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"33","issue":"3","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2013-04-29","publicationStatus":"PW","scienceBaseUri":"574d6667e4b07e28b6685008","contributors":{"authors":[{"text":"Bailey, Michael M.","contributorId":169684,"corporation":false,"usgs":false,"family":"Bailey","given":"Michael","email":"","middleInitial":"M.","affiliations":[{"id":25572,"text":"University of Maine, Orono","active":true,"usgs":false}],"preferred":false,"id":630705,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Zydlewski, Joseph D. 0000-0002-2255-2303 jzydlewski@usgs.gov","orcid":"https://orcid.org/0000-0002-2255-2303","contributorId":2004,"corporation":false,"usgs":true,"family":"Zydlewski","given":"Joseph","email":"jzydlewski@usgs.gov","middleInitial":"D.","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true},{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":false,"id":630704,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70045697,"text":"sir20135042 - 2013 - Simulation of groundwater flow, effects of artificial recharge, and storage volume changes in the Equus Beds aquifer near the city of Wichita, Kansas well field, 1935–2008","interactions":[],"lastModifiedDate":"2013-04-30T10:39:05","indexId":"sir20135042","displayToPublicDate":"2013-04-30T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-5042","title":"Simulation of groundwater flow, effects of artificial recharge, and storage volume changes in the Equus Beds aquifer near the city of Wichita, Kansas well field, 1935–2008","docAbstract":"The Equus Beds aquifer is a primary water-supply source for Wichita, Kansas and the surrounding area because of shallow depth to water, large saturated thickness, and generally good water quality. Substantial water-level declines in the Equus Beds aquifer have resulted from pumping groundwater for agricultural and municipal needs, as well as periodic drought conditions. In March 2006, the city of Wichita began construction of the Equus Beds Aquifer Storage and Recovery project to store and later recover groundwater, and to form a hydraulic barrier to the known chloride-brine plume near Burrton, Kansas. In October 2009, the U.S. Geological Survey, in cooperation with the city of Wichita, began a study to determine groundwater flow in the area of the Wichita well field, and chloride transport from the Arkansas River and Burrton oilfield to the Wichita well field.  Groundwater flow was simulated for the Equus Beds aquifer using the three-dimensional finite-difference groundwater-flow model MODFLOW-2000. The model simulates steady-state and transient conditions. The groundwater-flow model was calibrated by adjusting model input data and model geometry until model results matched field observations within an acceptable level of accuracy. The root mean square (RMS) error for water-level observations for the steady-state calibration simulation is 9.82 feet. The ratio of the RMS error to the total head loss in the model area is 0.049 and the mean error for water-level observations is 3.86 feet. The difference between flow into the model and flow out of the model across all model boundaries is -0.08 percent of total flow for the steady-state calibration. The RMS error for water-level observations for the transient calibration simulation is 2.48 feet, the ratio of the RMS error to the total head loss in the model area is 0.0124, and the mean error for water-level observations is 0.03 feet. The RMS error calculated for observed and simulated base flow gains or losses for the Arkansas River for the transient simulation is 7,916,564 cubic feet per day (91.6 cubic feet per second) and the RMS error divided by (/) the total range in streamflow (7,916,564/37,461,669 cubic feet per day) is 22 percent. The RMS error calculated for observed and simulated streamflow gains or losses for the Little Arkansas River for the transient simulation is 5,610,089 cubic feet per day(64.9 cubic feet per second) and the RMS error divided by the total range in streamflow (5,612,918/41,791,091 cubic feet per day) is 13 percent. The mean error between observed and simulated base flow gains or losses was 29,999 cubic feet per day (0.34 cubic feet per second) for the Arkansas River and -1,369,250 cubic feet per day (-15.8 cubic feet per second) for the Little Arkansas River. Cumulative streamflow gain and loss observations are similar to the cumulative simulated equivalents. Average percent mass balance difference for individual stress periods ranged from -0.46 to 0.51 percent. The cumulative mass balance for the transient calibration was 0.01 percent.  Composite scaled sensitivities indicate the simulations are most sensitive to parameters with a large areal distribution. For the steady-state calibration, these parameters include recharge, hydraulic conductivity, and vertical conductance. For the transient simulation, these parameters include evapotranspiration, recharge, and hydraulic conductivity.  The ability of the calibrated model to account for the additional groundwater recharged to the Equus Beds aquifer as part of the Aquifer Storage and Recovery project was assessed by using the U.S. Geological Survey subregional water budget program ZONEBUDGET and comparing those results to metered recharge for 2007 and 2008 and previous estimates of artificial recharge. The change in storage between simulations is the volume of water that estimates the recharge credit for the aquifer storage and recovery system.  The estimated increase in storage of 1,607 acre-ft in the basin storage area compared to metered recharge of 1,796 acre-ft indicates some loss of metered recharge. Increased storage outside of the basin storage area of 183 acre-ft accounts for all but 6 acre-ft or 0.33 percent of the total. Previously estimated recharge credits for 2007 and 2008 are 1,018 and 600 acre-ft, respectively, and a total estimated recharge credit of 1,618 acre-ft. Storage changes calculated for this study are 4.42 percent less for 2007 and 5.67 percent more for 2008 than previous estimates. Total storage change for 2007 and 2008 is 0.68 percent less than previous estimates. The small difference between the increase in storage from artificial recharge estimated with the groundwater-flow model and metered recharge indicates the groundwater model correctly accounts for the additional water recharged to the Equus Beds aquifer as part of the Aquifer Storage and Recovery project. Small percent differences between inflows and outflows for all stress periods and all index cells in the basin storage area, improved calibration compared to the previous model, and a reasonable match between simulated and measured long-term base flow indicates the groundwater model accurately simulates groundwater flow in the study area.  The change in groundwater level through recent years compared to the August 1940 groundwater level map has been documented and used to assess the change of storage volume of the Equus Beds aquifer in and near the Wichita well field for three different areas. Two methods were used to estimate changes in storage from simulation results using simulated change in groundwater levels in layer 1 between stress periods, and using ZONEBUDGET to calculate the change in storage in the same way the effects of artificial recharge were estimated within the basin storage area. The three methods indicate similar trends although the magnitude of storage changes differ.  Information about the change in storage in response to hydrologic stresses is important for managing groundwater resources in the study area. The comparison between the three methods indicates similar storage change trends are estimated and each could be used to determine relative increases or decreases in storage. Use of groundwater level changes that do not include storage changes that occur in confined or semi-confined parts of the aquifer will slightly underestimate storage changes; however, use of specific yield and groundwater level changes to estimate storage change in confined or semi-confined parts of the aquifer will overestimate storage changes. Using only changes in shallow groundwater levels would provide more accurate storage change estimates for the measured groundwater levels method.  The value used for specific yield is also an important consideration when estimating storage. For the Equus Beds aquifer the reported specific yield ranges between 0.08 and 0.35 and the storage coefficient (for confined conditions) ranges between 0.0004 and 0.16. Considering the importance of the value of specific yield and storage coefficient to estimates of storage change over time, and the wide range and substantial overlap for the reported values for specific yield and storage coefficient in the study area, further information on the distribution of specific yield and storage coefficient within the Equus Beds aquifer in the study area would greatly enhance the accuracy of estimated storage changes using both simulated groundwater level, simulated groundwater budget, or measured groundwater level methods.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20135042","collaboration":"Prepared in cooperation with the city of Wichita, Kansas, as part of the Equus Beds Groundwater Recharge Project","usgsCitation":"Kelly, B.P., Pickett, L.L., Hansen, C.V., and Ziegler, A., 2013, Simulation of groundwater flow, effects of artificial recharge, and storage volume changes in the Equus Beds aquifer near the city of Wichita, Kansas well field, 1935–2008: U.S. Geological Survey Scientific Investigations Report 2013-5042, Report: viii, 92 p.; Downloads Directory, https://doi.org/10.3133/sir20135042.","productDescription":"Report: viii, 92 p.; Downloads Directory","numberOfPages":"102","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-042806","costCenters":[{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true}],"links":[{"id":271633,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/SIR20135042.gif"},{"id":271632,"type":{"id":7,"text":"Companion Files"},"url":"https://pubs.usgs.gov/sir/2013/5042/downloads/"},{"id":271630,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2013/5042/"},{"id":271631,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2013/5042/sir2013-5042.pdf"}],"country":"United States","state":"Kansas","city":"Wichita","otherGeospatial":"Equus Beds Aquifer","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -98.3,37.6 ], [ -98.3,38.05 ], [ -97.16,38.05 ], [ -97.16,37.6 ], [ -98.3,37.6 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5180d9dce4b0df838b924d35","contributors":{"authors":[{"text":"Kelly, Brian P. 0000-0001-6378-2837 bkelly@usgs.gov","orcid":"https://orcid.org/0000-0001-6378-2837","contributorId":897,"corporation":false,"usgs":true,"family":"Kelly","given":"Brian","email":"bkelly@usgs.gov","middleInitial":"P.","affiliations":[{"id":396,"text":"Missouri Water Science Center","active":true,"usgs":true},{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true}],"preferred":true,"id":478069,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Pickett, Linda L.","contributorId":108377,"corporation":false,"usgs":true,"family":"Pickett","given":"Linda","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":478070,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hansen, Cristi V. chansen@usgs.gov","contributorId":435,"corporation":false,"usgs":true,"family":"Hansen","given":"Cristi","email":"chansen@usgs.gov","middleInitial":"V.","affiliations":[{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true}],"preferred":false,"id":478068,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Ziegler, Andrew C. aziegler@usgs.gov","contributorId":433,"corporation":false,"usgs":true,"family":"Ziegler","given":"Andrew C.","email":"aziegler@usgs.gov","affiliations":[{"id":353,"text":"Kansas Water Science Center","active":false,"usgs":true}],"preferred":false,"id":478067,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70045674,"text":"sir20125290 - 2013 - Estimates of future inundation of salt marshes in response to sea-level rise in and around Acadia National Park, Maine","interactions":[],"lastModifiedDate":"2013-04-29T13:35:29","indexId":"sir20125290","displayToPublicDate":"2013-04-29T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2012-5290","title":"Estimates of future inundation of salt marshes in response to sea-level rise in and around Acadia National Park, Maine","docAbstract":"Salt marshes are ecosystems that provide many important ecological functions in the Gulf of Maine. The U.S. Geological Survey investigated salt marshes in and around Acadia National Park from Penobscot Bay to the Schoodic Peninsula to map the potential for landward migration of marshes using a static inundation model of a sea-level rise scenario of 60 centimeters (cm; 2 feet). The resulting inundation contours can be used by resource managers to proactively adapt to sea-level rise by identifying and targeting low-lying coastal areas adjacent to salt marshes for conservation or further investigation, and to identify risks to infrastructure in the coastal zone. For this study, the mapping of static inundation was based on digital elevation models derived from light detection and ranging (LiDAR) topographic data collected in October 2010. Land-surveyed control points were used to evaluate the accuracy of the LiDAR data in the study area, yielding a root mean square error of 11.3 cm. An independent accuracy assessment of the LiDAR data specific to salt-marsh land surfaces indicated a root mean square error of 13.3 cm and 95-percent confidence interval of  &plusmn; 26.0 cm. LiDAR-derived digital elevation models and digital color aerial photography, taken during low tide conditions in 2008, with a pixel resolution of 0.5 meters, were used to identify the highest elevation of the land surface at each salt marsh in the study area. Inundation contours for 60-cm of sea-level rise were delineated above the highest marsh elevation for each marsh. Confidence interval contours (95-percent,&plusmn;  26.0 cm) were delineated above and below the 60-cm inundation contours, and artificial structures, such as roads and bridges, that may present barriers to salt-marsh migration were mapped. This study delineated 114 salt marshes totaling 340 hectares (ha), ranging in size from 0.11 ha (marshes less than 0.2 ha were mapped only if they were on Acadia National Park property) to 52 ha, with a median size of 1.0 ha. Inundation contours were mapped at 110 salt marshes. Approximately 350 ha of low-lying upland areas adjacent to these marshes will be inundated with 60 cm of sea-level rise. Many of these areas are currently freshwater wetlands. There are potential barriers to marsh migration at 27 of the 114 marshes. Although only 23 percent of the salt marshes in the study are on ANP property, about half of the upland areas that will be inundated are within ANP; most of the predicted inundated uplands (approximately 170 ha) include freshwater wetlands in the Northeast Creek and Bass Harbor Marsh areas. Most of the salt marshes analyzed do not have a significant amount of upland area available for migration. Seventy-five percent of the salt marshes have 20 meters or less of adjacent upland that would be inundated along most of their edges. All inundation contours, salt marsh locations, potential barriers, and survey data are stored in geospatial files for use in a geographic information system and are a part of this report.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20125290","collaboration":"Prepared in cooperation with the National Park Service","usgsCitation":"Nielsen, M.G., and Dudley, R.W., 2013, Estimates of future inundation of salt marshes in response to sea-level rise in and around Acadia National Park, Maine: U.S. Geological Survey Scientific Investigations Report 2012-5290, Report: viii, 20 p.; Appendix 1: Geospatial Data, https://doi.org/10.3133/sir20125290.","productDescription":"Report: viii, 20 p.; Appendix 1: Geospatial Data","onlineOnly":"Y","additionalOnlineFiles":"Y","costCenters":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"links":[{"id":271615,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir20125290.gif"},{"id":271612,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2012/5290/"},{"id":271613,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2012/5290/pdf/sir2012-5290_nielsen_508.pdf"},{"id":271614,"type":{"id":3,"text":"Appendix"},"url":"https://pubs.usgs.gov/sir/2012/5290/appendix.html"}],"scale":"24000","projection":"Universe Transverse Mercator, zone 19N","datum":"North American Datum of 1983","country":"United States","state":"Maine","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -68.6598,44.0059 ], [ -68.6598,44.4314 ], [ -68.0373,44.4314 ], [ -68.0373,44.0059 ], [ -68.6598,44.0059 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"517f884fe4b0e41721f7a320","contributors":{"authors":[{"text":"Nielsen, Martha G. 0000-0003-3038-9400 mnielsen@usgs.gov","orcid":"https://orcid.org/0000-0003-3038-9400","contributorId":4169,"corporation":false,"usgs":true,"family":"Nielsen","given":"Martha","email":"mnielsen@usgs.gov","middleInitial":"G.","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":478024,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dudley, Robert W. 0000-0002-0934-0568 rwdudley@usgs.gov","orcid":"https://orcid.org/0000-0002-0934-0568","contributorId":2223,"corporation":false,"usgs":true,"family":"Dudley","given":"Robert","email":"rwdudley@usgs.gov","middleInitial":"W.","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true},{"id":371,"text":"Maine Water Science Center","active":true,"usgs":true}],"preferred":true,"id":478023,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70045613,"text":"fs20133014 - 2013 - Mount St. Helens, 1980 to now—what’s going on?","interactions":[],"lastModifiedDate":"2017-05-18T10:58:23","indexId":"fs20133014","displayToPublicDate":"2013-04-26T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-3014, version 1.1","title":"Mount St. Helens, 1980 to now—what’s going on?","docAbstract":"Mount St. Helens seized the world’s attention in 1980 when the largest historical landslide on Earth and a powerful explosive eruption reshaped the volcano, created its distinctive crater, and dramatically modified the surrounding landscape. An enormous lava dome grew episodically in the crater until 1986, when the volcano became relatively quiet. A new glacier grew in the crater, wrapping around and partly burying the lava dome. From 1987 to 2003, sporadic earthquake swarms and small steam explosions indicated that magma (molten rock) was being replenished deep underground. In 2004, steam-and-ash explosions heralded the start of another eruption. A quieter phase of continuous lava extrusion followed and lasted until 2008, building a new dome and doubling the volume of lava on the crater floor. Scientists with the U.S. Geological Survey and University of Washington’s Pacific Northwest Seismograph Network maintain constant watch for signs of renewed activity at Mount St. Helens and other Cascade volcanoes. Now is an ideal time for both actual and virtual visitors to Mount St. Helens to learn more about dramatic changes taking place on and beneath this active volcano.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20133014","collaboration":"U.S. GEOLOGICAL SURVEY and the U.S. FOREST SERVICE—OUR VOLCANIC PUBLIC LANDS","usgsCitation":"Dzurisin, D., Driedger, C.L., and Faust, L.M., 2013, Mount St. Helens, 1980 to now—what’s going on? (Originally posted on April 23, 2013; Revised May 28, 2013): U.S. Geological Survey Fact Sheet 2013-3014, version 1.1, Report: 6 p.; Videos folder: 6 video links; Transcripts folder, https://doi.org/10.3133/fs20133014.","productDescription":"Report: 6 p.; Videos folder: 6 video links; Transcripts folder","numberOfPages":"6","onlineOnly":"Y","additionalOnlineFiles":"Y","costCenters":[{"id":157,"text":"Cascades Volcano Observatory","active":false,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":271503,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/fs20133014.gif"},{"id":271502,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/fs/2013/3014/transcripts"},{"id":271501,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/fs/2013/3014/videos"},{"id":271499,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/fs/2013/3014/"},{"id":271500,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2013/3014/fs2013-3014_text.pdf"}],"country":"United States","state":"Washington","otherGeospatial":"Mount St. Helens","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.30495452880858,\n              46.12608040848373\n            ],\n            [\n              -122.07527160644531,\n              46.12608040848373\n            ],\n            [\n              -122.07527160644531,\n              46.27815664309132\n            ],\n            [\n              -122.30495452880858,\n              46.27815664309132\n            ],\n            [\n              -122.30495452880858,\n              46.12608040848373\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","edition":"Originally posted on April 23, 2013; Revised May 28, 2013","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"517b93cee4b09d6a5f9a2ea2","contributors":{"authors":[{"text":"Dzurisin, Daniel 0000-0002-0138-5067 dzurisin@usgs.gov","orcid":"https://orcid.org/0000-0002-0138-5067","contributorId":538,"corporation":false,"usgs":true,"family":"Dzurisin","given":"Daniel","email":"dzurisin@usgs.gov","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":477954,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Driedger, Carolyn L. 0000-0002-4011-4112 driedger@usgs.gov","orcid":"https://orcid.org/0000-0002-4011-4112","contributorId":537,"corporation":false,"usgs":true,"family":"Driedger","given":"Carolyn","email":"driedger@usgs.gov","middleInitial":"L.","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":477953,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Faust, Lisa M. 0000-0001-6175-8999 lisaf@usgs.gov","orcid":"https://orcid.org/0000-0001-6175-8999","contributorId":5131,"corporation":false,"usgs":true,"family":"Faust","given":"Lisa","email":"lisaf@usgs.gov","middleInitial":"M.","affiliations":[],"preferred":true,"id":477955,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70045614,"text":"sir20135022 - 2013 - Salmonids, stream temperatures, and solar loading--modeling the shade provided to the Klamath River by vegetation and geomorphology","interactions":[],"lastModifiedDate":"2013-04-26T09:14:32","indexId":"sir20135022","displayToPublicDate":"2013-04-26T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2013-5022","title":"Salmonids, stream temperatures, and solar loading--modeling the shade provided to the Klamath River by vegetation and geomorphology","docAbstract":"The U.S. Geological Survey is studying approaches to characterize the thermal regulation of water and the dynamics of cold water refugia. High temperatures have physiological impacts on anadromous fish species. Factors affecting the presence, variability, and quality of thermal refugia are known, such as riverine and watershed processes, hyporheic flows, deep pools and bathymetric factors, thermal stratification of reservoirs, and other broader climatic considerations. This research develops a conceptual model and methodological techniques to quantify the change in solar insolation load to the Klamath River caused by riparian and floodplain vegetation, the morphology of the river, and the orientation and topographic characteristics of its watersheds. Using multiple scales of input data from digital elevation models and airborne light detection and ranging (LiDAR) derivatives, different analysis methods yielded three different model results. These models are correlated with thermal infrared imagery for ground-truth information at the focal confluence with the Scott River. Results from nonparametric correlation tests, geostatistical cross-covariograms, and cross-correlograms indicate that statistical relationships between the insolation models and the thermal infrared imagery exist and are significant. Furthermore, the use of geostatistics provides insights to the spatial structure of the relationships that would not be apparent otherwise. To incorporate a more complete representation of the temperature dynamics in the river system, other variables including the factors mentioned above, and their influence on solar loading, are discussed. With similar datasets, these methods could be applied to any river in the United States—especially those listed as temperature impaired under Section 303(d) of the Clean Water Act—or international riverine systems. Considering the importance of thermal refugia for aquatic species, these methods can help investigate opportunities for riparian restoration, identify problematic reaches unlikely to provide good habitat, and simulate changes to solar loading estimates from alternative landscape configurations.","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20135022","usgsCitation":"Forney, W.M., Soulard, C.E., and Chickadel, C.C., 2013, Salmonids, stream temperatures, and solar loading--modeling the shade provided to the Klamath River by vegetation and geomorphology: U.S. Geological Survey Scientific Investigations Report 2013-5022, iv, 26 p., https://doi.org/10.3133/sir20135022.","productDescription":"iv, 26 p.","numberOfPages":"32","onlineOnly":"Y","additionalOnlineFiles":"N","costCenters":[{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"links":[{"id":271506,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/sir20135022.gif"},{"id":271504,"type":{"id":15,"text":"Index Page"},"url":"https://pubs.usgs.gov/sir/2013/5022/"},{"id":271505,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2013/5022/sir2013-5022.pdf"}],"country":"United States","state":"California","otherGeospatial":"Klamath River;Scott River","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -122.85,41.36 ], [ -122.85,41.37 ], [ -122.82,41.37 ], [ -122.82,41.36 ], [ -122.85,41.36 ] ] ] } } ] }","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"517b93d7e4b09d6a5f9a2ea6","contributors":{"authors":[{"text":"Forney, William M.","contributorId":43490,"corporation":false,"usgs":true,"family":"Forney","given":"William","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":477957,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Soulard, Christopher E. 0000-0002-5777-9516 csoulard@usgs.gov","orcid":"https://orcid.org/0000-0002-5777-9516","contributorId":2642,"corporation":false,"usgs":true,"family":"Soulard","given":"Christopher","email":"csoulard@usgs.gov","middleInitial":"E.","affiliations":[{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"preferred":true,"id":477956,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Chickadel, C. Christopher","contributorId":106337,"corporation":false,"usgs":true,"family":"Chickadel","given":"C.","email":"","middleInitial":"Christopher","affiliations":[],"preferred":false,"id":477958,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70118244,"text":"70118244 - 2013 - A new data set for estimating organic carbon storage to 3 m depth in soils of the northern circumpolar permafrost region","interactions":[],"lastModifiedDate":"2014-07-28T09:21:37","indexId":"70118244","displayToPublicDate":"2013-04-25T09:16:52","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1426,"text":"Earth System Science Data","active":true,"publicationSubtype":{"id":10}},"title":"A new data set for estimating organic carbon storage to 3 m depth in soils of the northern circumpolar permafrost region","docAbstract":"High-latitude terrestrial ecosystems are key components in the global carbon cycle. The Northern Circumpolar Soil Carbon Database (NCSCD) was developed to quantify stocks of soil organic carbon (SOC) in the northern circumpolar permafrost region (a total area of 18.7 × 10<sup>6</sup> km<sup>2</sup>). The NCSCD is a geographical information system (GIS) data set that has been constructed using harmonized regional soil classification maps together with pedon data from the northern permafrost region. Previously, the NCSCD has been used to calculate SOC storage to the reference depths 0–30 cm and 0–100 cm (based on 1778 pedons). It has been shown that soils of the northern circumpolar permafrost region also contain significant quantities of SOC in the 100–300 cm depth range, but there has been no circumpolar compilation of pedon data to quantify this deeper SOC pool and there are no spatially distributed estimates of SOC storage below 100 cm depth in this region. Here we describe the synthesis of an updated pedon data set for SOC storage (kg C m<sup>-2</sup>) in deep soils of the northern circumpolar permafrost regions, with separate data sets for the 100–200 cm (524 pedons) and 200–300 cm (356 pedons) depth ranges. These pedons have been grouped into the North American and Eurasian sectors and the mean SOC storage for different soil taxa (subdivided into Gelisols including the sub-orders Histels, Turbels, Orthels, permafrost-free Histosols, and permafrost-free mineral soil orders) has been added to the updated NCSCDv2. The updated version of the data set is freely available online in different file formats and spatial resolutions that enable spatially explicit applications in GIS mapping and terrestrial ecosystem models. While this newly compiled data set adds to our knowledge of SOC in the 100–300 cm depth range, it also reveals that large uncertainties remain. Identified data gaps include spatial coverage of deep (> 100 cm) pedons in many regions as well as the spatial extent of areas with thin soils overlying bedrock and the quantity and distribution of massive ground ice.  An open access data-portal for the pedon data set and the GIS-data sets is available online at <a href=\"http://bolin.su.se/data/ncscd/\" target=\"_blank\">http://bolin.su.se/data/ncscd/</a>.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Earth System Science Data","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Copernicus","publisherLocation":"Katlenberg-Lindau, Germany","doi":"10.5194/essd-5-393-2013","usgsCitation":"Hugelius, G., Bockheim, J.G., Camill, P., Elberling, B., Grosse, G., Harden, J., Johnson, K., Jorgenson, T., Koven, C., Kuhry, P., Michaelson, G., Mishra, U., Palmtag, J., Ping, C., O'Donnell, J., Schirrmeister, L., Schuur, E., Sheng, Y., Smith, L., Strauss, J., and Yu, Z., 2013, A new data set for estimating organic carbon storage to 3 m depth in soils of the northern circumpolar permafrost region: Earth System Science Data, v. 5, no. 2, p. 393-402, https://doi.org/10.5194/essd-5-393-2013.","productDescription":"10 p.","startPage":"393","endPage":"402","numberOfPages":"10","costCenters":[],"links":[{"id":473860,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.5194/essd-5-393-2013","text":"Publisher Index Page"},{"id":291088,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":291087,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.5194/essd-5-393-2013"}],"volume":"5","issue":"2","noUsgsAuthors":false,"publicationDate":"2013-12-23","publicationStatus":"PW","scienceBaseUri":"57f7f301e4b0bc0bec0a070e","contributors":{"authors":[{"text":"Hugelius, G.","contributorId":27338,"corporation":false,"usgs":true,"family":"Hugelius","given":"G.","affiliations":[],"preferred":false,"id":496511,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bockheim, James G.","contributorId":41948,"corporation":false,"usgs":false,"family":"Bockheim","given":"James","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":496518,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Camill, P.","contributorId":78185,"corporation":false,"usgs":true,"family":"Camill","given":"P.","affiliations":[],"preferred":false,"id":496524,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Elberling, B.","contributorId":70305,"corporation":false,"usgs":true,"family":"Elberling","given":"B.","affiliations":[],"preferred":false,"id":496523,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Grosse, G.","contributorId":82140,"corporation":false,"usgs":true,"family":"Grosse","given":"G.","affiliations":[],"preferred":false,"id":496525,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Harden, J.W. 0000-0002-6570-8259","orcid":"https://orcid.org/0000-0002-6570-8259","contributorId":38585,"corporation":false,"usgs":true,"family":"Harden","given":"J.W.","affiliations":[],"preferred":false,"id":496516,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Johnson, Kevin","contributorId":83287,"corporation":false,"usgs":true,"family":"Johnson","given":"Kevin","affiliations":[],"preferred":false,"id":496526,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Jorgenson, T.","contributorId":19769,"corporation":false,"usgs":true,"family":"Jorgenson","given":"T.","email":"","affiliations":[],"preferred":false,"id":496510,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Koven, C.D.","contributorId":34017,"corporation":false,"usgs":true,"family":"Koven","given":"C.D.","affiliations":[],"preferred":false,"id":496514,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Kuhry, P.","contributorId":57277,"corporation":false,"usgs":false,"family":"Kuhry","given":"P.","affiliations":[],"preferred":false,"id":496519,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Michaelson, G.","contributorId":30851,"corporation":false,"usgs":true,"family":"Michaelson","given":"G.","affiliations":[],"preferred":false,"id":496512,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Mishra, U.","contributorId":99906,"corporation":false,"usgs":true,"family":"Mishra","given":"U.","email":"","affiliations":[],"preferred":false,"id":496528,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Palmtag, J.","contributorId":62532,"corporation":false,"usgs":true,"family":"Palmtag","given":"J.","email":"","affiliations":[],"preferred":false,"id":496521,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Ping, C.-L.","contributorId":60843,"corporation":false,"usgs":true,"family":"Ping","given":"C.-L.","email":"","affiliations":[],"preferred":false,"id":496520,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"O'Donnell, J.","contributorId":34785,"corporation":false,"usgs":true,"family":"O'Donnell","given":"J.","affiliations":[],"preferred":false,"id":496515,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Schirrmeister, L.","contributorId":41355,"corporation":false,"usgs":true,"family":"Schirrmeister","given":"L.","affiliations":[],"preferred":false,"id":496517,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Schuur, E.A.G.","contributorId":106679,"corporation":false,"usgs":true,"family":"Schuur","given":"E.A.G.","affiliations":[],"preferred":false,"id":496529,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Sheng, Y.","contributorId":66611,"corporation":false,"usgs":true,"family":"Sheng","given":"Y.","email":"","affiliations":[],"preferred":false,"id":496522,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Smith, L.C.","contributorId":88561,"corporation":false,"usgs":true,"family":"Smith","given":"L.C.","email":"","affiliations":[],"preferred":false,"id":496527,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Strauss, J.","contributorId":8770,"corporation":false,"usgs":true,"family":"Strauss","given":"J.","affiliations":[],"preferred":false,"id":496509,"contributorType":{"id":1,"text":"Authors"},"rank":20},{"text":"Yu, Z.","contributorId":32696,"corporation":false,"usgs":true,"family":"Yu","given":"Z.","email":"","affiliations":[],"preferred":false,"id":496513,"contributorType":{"id":1,"text":"Authors"},"rank":21}]}}
,{"id":70045600,"text":"70045600 - 2013 - Expression kinetics of key genes in the early innate immune response to Great Lakes viral hemorrhagic septicemia virus IVb infection in yellow perch (<i>Perca flavescens</i>)","interactions":[],"lastModifiedDate":"2016-05-17T08:58:34","indexId":"70045600","displayToPublicDate":"2013-04-25T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1383,"text":"Developmental and Comparative Immunology","active":true,"publicationSubtype":{"id":10}},"title":"Expression kinetics of key genes in the early innate immune response to Great Lakes viral hemorrhagic septicemia virus IVb infection in yellow perch (<i>Perca flavescens</i>)","docAbstract":"<p><span>The recently discovered strain of viral hemorrhagic septicemia virus, VHSV-IVb, represents an example of the introduction of an extremely pathogenic rhabdovirus capable of infecting a wide variety of new fish species in a new host-environment. The goal of the present study was to delineate the expression kinetics of key genes in the innate immune response relative to the very early stages of VHSV-IVb infection using the yellow perch (</span><i>Perca flavescens</i><span>) as a model. Administration of VHSV-IVb by IP-injection into juvenile yellow perch resulted in 84% cumulative mortality, indicating their high susceptibility to this disease. In fish sampled in the very early stages of infection, a significant up-regulation of Mx gene expression in the liver, as well as IL-1&beta; and SAA activation in the head kidney, spleen, and liver was directly correlated to viral load. The potential down-regulation of Mx in the hematopoietic tissues, head kidney and spleen, may represent a strategy utilized by the virus to increase replication.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.dci.2013.03.012","usgsCitation":"Olson, W., Emmenegger, E., Glenn, J., Simchick, C., Winton, J., and Goetz, F., 2013, Expression kinetics of key genes in the early innate immune response to Great Lakes viral hemorrhagic septicemia virus IVb infection in yellow perch (<i>Perca flavescens</i>): Developmental and Comparative Immunology, v. 41, no. 1, p. 11-19, https://doi.org/10.1016/j.dci.2013.03.012.","productDescription":"9 p.","startPage":"11","endPage":"19","numberOfPages":"9","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-043828","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":271486,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"41","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"517a425be4b072c16ef14adf","contributors":{"authors":[{"text":"Olson, Wendy","contributorId":104794,"corporation":false,"usgs":true,"family":"Olson","given":"Wendy","email":"","affiliations":[],"preferred":false,"id":477934,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Emmenegger, Eveline","contributorId":79780,"corporation":false,"usgs":true,"family":"Emmenegger","given":"Eveline","affiliations":[],"preferred":false,"id":477932,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Glenn, Jolene","contributorId":73900,"corporation":false,"usgs":true,"family":"Glenn","given":"Jolene","affiliations":[],"preferred":false,"id":477931,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Simchick, Crystal","contributorId":94570,"corporation":false,"usgs":true,"family":"Simchick","given":"Crystal","email":"","affiliations":[],"preferred":false,"id":477933,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Winton, Jim","contributorId":35213,"corporation":false,"usgs":true,"family":"Winton","given":"Jim","email":"","affiliations":[],"preferred":false,"id":477929,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Goetz, Frederick","contributorId":71854,"corporation":false,"usgs":true,"family":"Goetz","given":"Frederick","email":"","affiliations":[],"preferred":false,"id":477930,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70118247,"text":"70118247 - 2013 - Simulating boreal forest carbon dynamics after stand-replacing fire disturbance: insights from a global process-based vegetation model","interactions":[],"lastModifiedDate":"2014-07-28T09:29:07","indexId":"70118247","displayToPublicDate":"2013-04-24T09:24:36","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1011,"text":"Biogeosciences","active":true,"publicationSubtype":{"id":10}},"title":"Simulating boreal forest carbon dynamics after stand-replacing fire disturbance: insights from a global process-based vegetation model","docAbstract":"Stand-replacing fires are the dominant fire type in North American boreal forests. They leave a historical legacy of a mosaic landscape of different aged forest cohorts. This forest age dynamics must be included in vegetation models to accurately quantify the role of fire in the historical and current regional forest carbon balance. The present study adapted the global process-based vegetation model ORCHIDEE to simulate the CO<sub>2</sub> emissions from boreal forest fire and the subsequent recovery after a stand-replacing fire; the model represents postfire new cohort establishment, forest stand structure and the self-thinning process. Simulation results are evaluated against observations of three clusters of postfire forest chronosequences in Canada and Alaska. The variables evaluated include: fire carbon emissions, CO<sub>2</sub> fluxes (gross primary production, total ecosystem respiration and net ecosystem exchange), leaf area index, and biometric measurements (aboveground biomass carbon, forest floor carbon, woody debris carbon, stand individual density, stand basal area, and mean diameter at breast height). When forced by local climate and the atmospheric CO<sub>2</sub> history at each chronosequence site, the model simulations generally match the observed CO<sub>2</sub> fluxes and carbon stock data well, with model-measurement mean square root of deviation comparable with the measurement accuracy (for CO<sub>2</sub> flux ~100 g C m<sup>−2</sup> yr<sup>−1</sup>, for biomass carbon ~1000 g C m<sup>−2</sup> and for soil carbon ~2000 g C m<sup>−2</sup>). We find that the current postfire forest carbon sink at the evaluation sites, as observed by chronosequence methods, is mainly due to a combination of historical CO<sub>2</sub> increase and forest succession. Climate change and variability during this period offsets some of these expected carbon gains. The negative impacts of climate were a likely consequence of increasing water stress caused by significant temperature increases that were not matched by concurrent increases in precipitation. Our simulation results demonstrate that a global vegetation model such as ORCHIDEE is able to capture the essential ecosystem processes in fire-disturbed boreal forests and produces satisfactory results in terms of both carbon fluxes and carbon-stock evolution after fire. This makes the model suitable for regional simulations in boreal regions where fire regimes play a key role in the ecosystem carbon balance.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Biogeosciences","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"European Geosciences Union","publisherLocation":"Göttingen, Germany","doi":"10.5194/bg-10-8233-2013","usgsCitation":"Yue, C., Ciais, P., Luyssaert, S., Cadule, P., Harden, J., Randerson, J., Bellassen, V., Wang, T., Piao, S., Poulter, B., and Viovy, N., 2013, Simulating boreal forest carbon dynamics after stand-replacing fire disturbance: insights from a global process-based vegetation model: Biogeosciences, v. 10, no. 12, p. 8233-8252, https://doi.org/10.5194/bg-10-8233-2013.","productDescription":"20 p.","startPage":"8233","endPage":"8252","numberOfPages":"20","costCenters":[],"links":[{"id":473862,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.5194/bg-10-8233-2013","text":"Publisher Index Page"},{"id":291091,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":291090,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.5194/bg-10-8233-2013"}],"volume":"10","issue":"12","noUsgsAuthors":false,"publicationDate":"2013-12-13","publicationStatus":"PW","scienceBaseUri":"57f7f301e4b0bc0bec0a0710","contributors":{"authors":[{"text":"Yue, C.","contributorId":49283,"corporation":false,"usgs":true,"family":"Yue","given":"C.","email":"","affiliations":[],"preferred":false,"id":496561,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ciais, P.","contributorId":39604,"corporation":false,"usgs":true,"family":"Ciais","given":"P.","affiliations":[],"preferred":false,"id":496559,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Luyssaert, S.","contributorId":94230,"corporation":false,"usgs":true,"family":"Luyssaert","given":"S.","email":"","affiliations":[],"preferred":false,"id":496567,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Cadule, P.","contributorId":85521,"corporation":false,"usgs":true,"family":"Cadule","given":"P.","email":"","affiliations":[],"preferred":false,"id":496566,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Harden, J.","contributorId":43918,"corporation":false,"usgs":true,"family":"Harden","given":"J.","email":"","affiliations":[],"preferred":false,"id":496560,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Randerson, J.","contributorId":94458,"corporation":false,"usgs":true,"family":"Randerson","given":"J.","affiliations":[],"preferred":false,"id":496568,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Bellassen, V.","contributorId":72721,"corporation":false,"usgs":true,"family":"Bellassen","given":"V.","email":"","affiliations":[],"preferred":false,"id":496564,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Wang, T.","contributorId":53707,"corporation":false,"usgs":true,"family":"Wang","given":"T.","affiliations":[],"preferred":false,"id":496563,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Piao, S.L.","contributorId":28911,"corporation":false,"usgs":true,"family":"Piao","given":"S.L.","email":"","affiliations":[],"preferred":false,"id":496558,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Poulter, B.","contributorId":49718,"corporation":false,"usgs":true,"family":"Poulter","given":"B.","email":"","affiliations":[],"preferred":false,"id":496562,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Viovy, N.","contributorId":81421,"corporation":false,"usgs":true,"family":"Viovy","given":"N.","email":"","affiliations":[],"preferred":false,"id":496565,"contributorType":{"id":1,"text":"Authors"},"rank":11}]}}
,{"id":70045584,"text":"70045584 - 2013 - Estimating floodplain sedimentation in the Laguna de Santa Rosa, Sonoma County, CA","interactions":[],"lastModifiedDate":"2013-04-24T16:57:38","indexId":"70045584","displayToPublicDate":"2013-04-24T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3750,"text":"Wetlands","onlineIssn":"1943-6246","printIssn":"0277-5212","active":true,"publicationSubtype":{"id":10}},"title":"Estimating floodplain sedimentation in the Laguna de Santa Rosa, Sonoma County, CA","docAbstract":"We present a conceptual and analytical framework for predicting the spatial distribution of floodplain sedimentation for the Laguna de Santa Rosa, Sonoma County, CA. We assess the role of the floodplain as a sink for fine-grained sediment and investigate concerns regarding the potential loss of flood storage capacity due to historic sedimentation. We characterized the spatial distribution of sedimentation during a post-flood survey and developed a spatially distributed sediment deposition potential map that highlights zones of floodplain sedimentation. The sediment deposition potential map, built using raster files that describe the spatial distribution of relevant hydrologic and landscape variables, was calibrated using 2 years of measured overbank sedimentation data and verified using longer-term rates determined using dendrochronology. The calibrated floodplain deposition potential relation was used to estimate an average annual floodplain sedimentation rate (3.6 mm/year) for the ~11 km<sup>2</sup> floodplain. This study documents the development of a conceptual model of overbank sedimentation, describes a methodology to estimate the potential for various parts of a floodplain complex to accumulate sediment over time, and provides estimates of short and long-term overbank sedimentation rates that can be used for ecosystem management and prioritization of restoration activities.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Wetlands","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Springer","doi":"10.1007/s13157-012-0350-4","usgsCitation":"Curtis, J.A., Flint, L.E., and Hupp, C.R., 2013, Estimating floodplain sedimentation in the Laguna de Santa Rosa, Sonoma County, CA: Wetlands, v. 33, no. 1, p. 29-45, https://doi.org/10.1007/s13157-012-0350-4.","productDescription":"17 p.","startPage":"29","endPage":"45","ipdsId":"IP-018988","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":271425,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":271424,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1007/s13157-012-0350-4"}],"country":"United States","state":"California","county":"Sonoma County","city":"Santa Rosa","geographicExtents":"{ \"type\": \"FeatureCollection\", \"features\": [ { \"type\": \"Feature\", \"properties\": {}, \"geometry\": { \"type\": \"Polygon\", \"coordinates\": [ [ [ -122.8341,38.3637 ], [ -122.8341,38.5074 ], [ -122.573,38.5074 ], [ -122.573,38.3637 ], [ -122.8341,38.3637 ] ] ] } } ] }","volume":"33","issue":"1","noUsgsAuthors":false,"publicationDate":"2012-12-20","publicationStatus":"PW","scienceBaseUri":"5178f0dee4b0d842c705f6b8","contributors":{"authors":[{"text":"Curtis, Jennifer A. 0000-0001-7766-994X jacurtis@usgs.gov","orcid":"https://orcid.org/0000-0001-7766-994X","contributorId":927,"corporation":false,"usgs":true,"family":"Curtis","given":"Jennifer","email":"jacurtis@usgs.gov","middleInitial":"A.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":477874,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Flint, Lorraine E. 0000-0002-7868-441X lflint@usgs.gov","orcid":"https://orcid.org/0000-0002-7868-441X","contributorId":1184,"corporation":false,"usgs":true,"family":"Flint","given":"Lorraine","email":"lflint@usgs.gov","middleInitial":"E.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":477875,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hupp, Cliff R. 0000-0003-1853-9197 crhupp@usgs.gov","orcid":"https://orcid.org/0000-0003-1853-9197","contributorId":2344,"corporation":false,"usgs":true,"family":"Hupp","given":"Cliff","email":"crhupp@usgs.gov","middleInitial":"R.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":436,"text":"National Research Program - Eastern Branch","active":true,"usgs":true}],"preferred":true,"id":477876,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70044120,"text":"70044120 - 2013 - Development and evaluation of a bioenergetics model for bull trout","interactions":[],"lastModifiedDate":"2013-04-24T22:01:02","indexId":"70044120","displayToPublicDate":"2013-04-24T00:00:00","publicationYear":"2013","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3624,"text":"Transactions of the American Fisheries Society","active":true,"publicationSubtype":{"id":10}},"title":"Development and evaluation of a bioenergetics model for bull trout","docAbstract":"We conducted laboratory experiments to parameterize a bioenergetics model for wild Bull Trout Salvelinus confluentus, estimating the effects of body mass (12–1,117 g) and temperature (3–20°C) on maximum consumption (C <sub>max</sub>) and standard metabolic rates. The temperature associated with the highest C <sub>max</sub> was 16°C, and C <sub>max</sub> showed the characteristic dome-shaped temperature-dependent response. Mass-dependent values of C <sub>max</sub> (N = 28) at 16°C ranged from 0.03 to 0.13 g·g<sup>−1</sup>·d<sup>−1</sup>. The standard metabolic rates of fish (N = 110) ranged from 0.0005 to 0.003 g·O<sub>2</sub>·g<sup>−1</sup>·d<sup>−1</sup> and increased with increasing temperature but declined with increasing body mass. In two separate evaluation experiments, which were conducted at only one ration level (40% of estimated C <sub>max</sub>), the model predicted final weights that were, on average, within 1.2 ± 2.5% (mean ± SD) of observed values for fish ranging from 119 to 573 g and within 3.5 ± 4.9% of values for 31–65 g fish. Model-predicted consumption was within 5.5 ± 10.9% of observed values for larger fish and within 12.4 ± 16.0% for smaller fish. Our model should be useful to those dealing with issues currently faced by Bull Trout, such as climate change or alterations in prey availability.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Transactions of the American Fisheries Society","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Taylor & Francis","doi":"10.1080/00028487.2012.720628","usgsCitation":"Mesa, M.G., Welland, L.K., Christiansen, H.E., Sauter, S.T., and Beauchamp, D.A., 2013, Development and evaluation of a bioenergetics model for bull trout: Transactions of the American Fisheries Society, v. 142, no. 1, p. 41-49, https://doi.org/10.1080/00028487.2012.720628.","productDescription":"9 p.","startPage":"41","endPage":"49","ipdsId":"IP-034158","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":271439,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":271438,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1080/00028487.2012.720628"}],"volume":"142","issue":"1","noUsgsAuthors":false,"publicationDate":"2012-12-04","publicationStatus":"PW","scienceBaseUri":"5178f0dde4b0d842c705f6b0","contributors":{"authors":[{"text":"Mesa, Matthew G. mmesa@usgs.gov","contributorId":3423,"corporation":false,"usgs":true,"family":"Mesa","given":"Matthew","email":"mmesa@usgs.gov","middleInitial":"G.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":474833,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Welland, Lisa K.","contributorId":89782,"corporation":false,"usgs":true,"family":"Welland","given":"Lisa","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":474836,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Christiansen, Helena E. hchristiansen@usgs.gov","contributorId":4530,"corporation":false,"usgs":true,"family":"Christiansen","given":"Helena","email":"hchristiansen@usgs.gov","middleInitial":"E.","affiliations":[],"preferred":true,"id":474835,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sauter, Sally T. ssauter@usgs.gov","contributorId":2921,"corporation":false,"usgs":true,"family":"Sauter","given":"Sally","email":"ssauter@usgs.gov","middleInitial":"T.","affiliations":[],"preferred":true,"id":474832,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Beauchamp, David A. 0000-0002-3592-8381 fadave@usgs.gov","orcid":"https://orcid.org/0000-0002-3592-8381","contributorId":4205,"corporation":false,"usgs":true,"family":"Beauchamp","given":"David","email":"fadave@usgs.gov","middleInitial":"A.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":474834,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
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