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Riparian areas provide high-quality habitat for many species of declining migratory breeding birds. We analyzed changes in vegetation and bird abundance at a wildlife refuge in southeastern Oregon over 24 years, following cessation of 120 years of livestock grazing. We quantified long-term changes in overall avian abundance and species richness and, specifically, in the abundances of 20 focal species. We then compared the local responses of the focal species to population-scale trends of the same species at three different large spatial scales. Overall avian abundance increased 23% during the 12 years after removal and remained consistent from then through year 24. Three times as many species colonized the survey sites as dropped out. Of the focal species, most riparian woodland-tree or shrub dependent, sagebrush obligate, and grassland or meadow taxa increased in abundance or remained stable locally. As these species were generally of conservation concern, the population increases contradicted regionally declining or stable trends. In contrast, most riparian woodland-cavity nester species decreased in abundance locally, reflecting disruption of aspen stand dynamics by decades of grazing. Avian nest parasites and competitors of native species declined in abundance locally, matching regional trends. Restoring riparian ecosystems by removing livestock appeared to be beneficial to the conservation of many of these declining populations of migratory birds.","language":"English","publisher":"Elsevier","doi":"10.1016/j.biocon.2019.108378","usgsCitation":"Poessel, S.A., Hagar, J., Haggerty, P., and Katzner, T., 2019, Removal of cattle grazing correlates with increases in vegetation productivity and in abundance of imperiled breeding birds: Biological Conservation, v. 214, 108378, https://doi.org/10.1016/j.biocon.2019.108378.","productDescription":"108378","ipdsId":"IP-103030","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":458920,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.biocon.2019.108378","text":"Publisher Index Page"},{"id":370497,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United 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,{"id":70207537,"text":"70207537 - 2019 - Comparative functional skeletal morphology among three genera of shrews: Implications for the evolution of locomotor behavior in the Soricinae (Eulipotyphla: Soricidae)","interactions":[],"lastModifiedDate":"2019-12-24T11:21:20","indexId":"70207537","displayToPublicDate":"2019-12-19T11:18:39","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2373,"text":"Journal of Mammalogy","onlineIssn":"1545-1542","printIssn":"0022-2372","active":true,"publicationSubtype":{"id":10}},"title":"Comparative functional skeletal morphology among three genera of shrews: Implications for the evolution of locomotor behavior in the Soricinae (Eulipotyphla: Soricidae)","docAbstract":"<p><span>The clade comprising the soricid tribes Blarinellini (</span><i>Blarinella</i><span>) and Blarinini (</span><i>Blarina</i><span>&nbsp;and&nbsp;</span><i>Cryptotis</i><span>) is notable within the Soricidae (Eulipotyphla) for the large proportion of reportedly semifossorial species. To better define locomotor modes among species in these two tribes, we quantified purported locomotor adaptations by calculating 23 functional indices from postcranial measurements obtained from museum specimens of&nbsp;</span><i>Blarina</i><span>&nbsp;and&nbsp;</span><i>Blarinella</i><span>&nbsp;and published measurements for 16 species of&nbsp;</span><i>Cryptotis</i><span>. We then analyzed relative ambulatory–fossorial function of each species using principal component analyses and mean percentile rank (MPR) analysis of the indices. Species within the Blarinellini–Blarinini clade exhibit a graded series of morphologies with four primary functional groupings that we classified as “ambulatory,” “intermediate,” “semifossorial,” and “fossorial.” To obtain a preliminary overview of evolution of locomotor modes in this group, we mapped MPRs on a composite phylogeny and examined the resulting patterns. That analysis revealed that the most recent common ancestor of the Blarinellini–Blarinini clade most likely had an intermediate or semifossorial locomotor morphology. Individual subclades subsequently evolved either more ambulatory or more fossorial morphologies. Hence, evolution of locomotor traits within this clade is complex. Multiple shifts in locomotor mode likely occurred, and no single directional tendency is apparent either among the major modes or in levels of complexity.</span></p>","language":"English","publisher":"Oxford Academic Press","doi":"10.1093/jmammal/gyz098","usgsCitation":"Woodman, N., and Wilken, A.T., 2019, Comparative functional skeletal morphology among three genera of shrews: Implications for the evolution of locomotor behavior in the Soricinae (Eulipotyphla: Soricidae): Journal of Mammalogy, v. 100, no. 6, p. 1750-1764, https://doi.org/10.1093/jmammal/gyz098.","productDescription":"15 p.","startPage":"1750","endPage":"1764","ipdsId":"IP-108146","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":458923,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/jmammal/gyz098","text":"Publisher Index Page"},{"id":370666,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"100","issue":"6","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2019-12-19","publicationStatus":"PW","contributors":{"authors":[{"text":"Woodman, Neal 0000-0003-2689-7373 nwoodman@usgs.gov","orcid":"https://orcid.org/0000-0003-2689-7373","contributorId":3547,"corporation":false,"usgs":true,"family":"Woodman","given":"Neal","email":"nwoodman@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":778388,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wilken, Alec T.","contributorId":217703,"corporation":false,"usgs":false,"family":"Wilken","given":"Alec","email":"","middleInitial":"T.","affiliations":[{"id":39687,"text":"University of Missouri, Columbia","active":true,"usgs":false}],"preferred":false,"id":778389,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70205733,"text":"fs20193053 - 2019 - Assessment of coal resources and reserves in the Little Snake River coal field and Red Desert assessment area, Greater Green River Basin, Wyoming","interactions":[],"lastModifiedDate":"2022-04-19T21:19:35.302655","indexId":"fs20193053","displayToPublicDate":"2019-12-19T11:00:00","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-3053","displayTitle":"Assessment of Coal Resources and Reserves in the Little Snake River Coal Field and Red Desert Assessment Area, Greater Green River Basin, Wyoming","title":"Assessment of coal resources and reserves in the Little Snake River coal field and Red Desert assessment area, Greater Green River Basin, Wyoming","docAbstract":"<p>The assessment of the Little Snake River coal field and Red Desert area covers approximately 2,300 square miles in the eastern portion of the Greater Green River Basin in south-central Wyoming. Coal-bearing formations are present throughout the Eocene, Paleocene, and Cretaceous strata in the assessment area. Paleogene-age coal beds are present in the Eocene Wasatch Formation and Paleocene Fort Union Formation. Cretaceous-age coal beds are present in the Lance, Almond, and Allen Ridge Formations. Utilizing over 4,000 data points, 55 individual coal beds were identified in the assessment area. Coal resources were calculated using geologic models generated from these data points, using criteria for minimum thickness and areal extent. The geologic modeling criteria indicated that 33 of the 55 individual coal beds had sufficient thickness and areal extent to be economically significant. Calculated original coal resources within the assessment area were approximately 73.2 billion short tons (BST). After excluding coal resources lost due to land use and technical restrictions, recoverable coal resources were approximately 19.37 BST, including 2.14 BST of coal resources that could be extracted using surface mining methods and 17.23 BST of coal resources that could be extracted using underground mining methods. Due to mining costs and projected low potential sales value of the coal resources, only approximately 167 million short tons (MST) can be classified as reserves, which is less than 1 percent of the recoverable coal resources</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20193053","usgsCitation":"Shaffer, B.N., Pierce, P.E., Kinney, S.A., Olea, R., and Luppens, J.A., 2019, Assessment of coal resources and reserves in the Little Snake River coal field and Red Desert assessment area, Greater Green River Basin, Wyoming: U.S. Geological Survey Fact Sheet 2019–3053, 6 p., https://doi.org/10.3133/fs20193053.","productDescription":"6 p.","onlineOnly":"N","ipdsId":"IP-109360","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":370380,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2019/3053/coverthb.jpg"},{"id":370382,"rank":3,"type":{"id":22,"text":"Related Work"},"url":"https://doi.org/10.3133/pp1836","text":"Coal Geology and Assessment of Resources and Reserves in the Little Snake River Coal Field and Red Desert Assessment Area, Greater Green River Basin, Wyoming"},{"id":370381,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2019/3053/fs20193053.pdf","text":"Report","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2019-3053"},{"id":399136,"rank":4,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_109583.htm"}],"country":"United States","state":"Wyoming","otherGeospatial":"Little Snake River coal field, Red Desert assessment area","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -108.35,\n              41\n            ],\n            [\n              -107.3333,\n              41\n            ],\n            [\n              -107.3333,\n              42.1078\n            ],\n            [\n              -108.35,\n              42.1078\n            ],\n            [\n              -108.35,\n              41\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"http://energy.usgs.gov/\" data-mce-href=\"http://energy.usgs.gov/\">Central Energy Resources Science Center</a><br>U.S. Geological Survey<br>Box 25046, MS-939<br>Denver, CO 80225-0046</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Setting and Background Information</li><li>Assessment Criteria</li><li>Assessment Results</li><li>Conclusions</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"publishedDate":"2019-12-19","noUsgsAuthors":false,"publicationDate":"2019-12-19","publicationStatus":"PW","contributors":{"authors":[{"text":"Shaffer, Brian N. 0000-0002-8787-7504","orcid":"https://orcid.org/0000-0002-8787-7504","contributorId":203755,"corporation":false,"usgs":true,"family":"Shaffer","given":"Brian N.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":774811,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Pierce, Paul E. 0000-0001-9675-7320","orcid":"https://orcid.org/0000-0001-9675-7320","contributorId":203757,"corporation":false,"usgs":true,"family":"Pierce","given":"Paul E.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":774812,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kinney, Scott A. 0000-0001-5008-5813 skinney@usgs.gov","orcid":"https://orcid.org/0000-0001-5008-5813","contributorId":1395,"corporation":false,"usgs":true,"family":"Kinney","given":"Scott","email":"skinney@usgs.gov","middleInitial":"A.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":774813,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Olea, Ricardo A. 0000-0003-4308-0808 rolea@usgs.gov","orcid":"https://orcid.org/0000-0003-4308-0808","contributorId":208109,"corporation":false,"usgs":true,"family":"Olea","given":"Ricardo","email":"rolea@usgs.gov","middleInitial":"A.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":774814,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Luppens, James A. 0000-0001-7607-8750 jluppens@usgs.gov","orcid":"https://orcid.org/0000-0001-7607-8750","contributorId":550,"corporation":false,"usgs":true,"family":"Luppens","given":"James","email":"jluppens@usgs.gov","middleInitial":"A.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":774815,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70196299,"text":"pp1836 - 2019 - Coal geology and assessment of resources and reserves in the Little Snake River Coal Field and Red Desert Assessment Area, Greater Green River Basin, Wyoming","interactions":[],"lastModifiedDate":"2023-06-26T19:55:03.421537","indexId":"pp1836","displayToPublicDate":"2019-12-19T11:00:00","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":331,"text":"Professional Paper","code":"PP","onlineIssn":"2330-7102","printIssn":"1044-9612","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"1836","displayTitle":"Coal Geology and Assessment of Resources and Reserves in the Little Snake River Coal Field and Red Desert Assessment Area, Greater Green River Basin, Wyoming","title":"Coal geology and assessment of resources and reserves in the Little Snake River Coal Field and Red Desert Assessment Area, Greater Green River Basin, Wyoming","docAbstract":"<p>The U.S. Geological Survey is studying regional-scale assessments of resources and reserves of primary coal beds in the major coal bed basins in the United States to help formulate policy for Federal, State, and local energy and land use. This report summarizes the geology and coal resources and reserves in the Little Snake River coal field and Red Desert assessment area in the Greater Green River Basin, southwestern Wyoming. These areas are contiguous and referred to as the “assessment area” in this report. The assessment area covers about 2,300 square miles of the eastern section of the 15,400-square-mile Greater Green River Basin. This area was prioritized for assessment because no comprehensive resource assessment had previously been completed in the area; abundant, previously unavailable drill hole data from cooperators and stakeholders became available; and there are active coal mines in the Greater Green River Basin area producing from some of the same formations as those found in the assessment area.</p><p>Coal-bearing Eocene, Paleocene, and Upper Cretaceous formations have a composite thickness of more than 11,000 feet in the assessment area. Stratigraphic sequences that contain multiple coal beds within a formation or member are referred to as coal zones in this report. Paleogene coal beds are found within coal zones in the Eocene Wasatch Formation and the Paleocene Fort Union Formation. Cretaceous coal beds are within coal zones in the Lance, Almond, and Allen Ridge Formations.</p><p>A total of 4,214 drill holes and measured sections were used to construct a geologic database for this assessment. From these data, 7 coal zones containing 55 individual coal beds were identified. Not all 55 coal beds were assessed; only those beds that were at least 3 feet thick and had at least a 2-square-mile areal extent were considered. Using a geology-based assessment methodology, the U.S. Geological Survey estimated original, available, and recoverable coal resources for 33 coal beds that met those criteria.</p><p>An original resource of 73.2 billion short tons of coal was calculated for the 33 coal beds that met the criteria in the assessment area. To be considered extractable by surface mining methods, coal beds had to be equal to or greater than 3 feet thick and less than 300 feet deep. Of the 73.2 billion short tons (BST), 19.3 BST were determined to be recoverable resources, of which approximately 2.1 BST were considered as recoverable resources by surface mining methods at a stripping ratio of 10:1 or less. (defined as recoverable resources for this assessment, based on economic modeling and regional mining analogs). Recoverable resources for underground mining methods (coal 8 to 15 feet thick and between 300 and 3,000 feet deep) totaled 17.2 BST. Out of the 19.3 BST assessed as recoverable coal resources, approximately 167 million short tons (MST) were considered to be reserves.</p><p>Within the 7 coal zones, the Wasatch coal zone contains an original resource of about 6.8 BST billion short tons of coal, of which 2.6 BST are considered a recoverable resource and approximately 26.7 MST are considered reserves. The Overland coal zone, in the Fort Union Formation, contains an original resource of approximately 23 BST of coal, of which 8.4 BST are considered a recoverable resource and approximately 74 MST are considered reserves. The China Butte coal zone, in the Fort Union Formation, contains an original resource of 36.2 BST of coal, of which 6.3 BST are considered a recoverable resource and approximately 5.5 MST are considered reserves. The Almond coal zone, in the Almond Formation, contains an original resource of 7.0 BST, of which approximately 2.0 BST are considered a recoverable resource and 61 MST are considered reserves. Resources were not calculated for the coal zones within the Niland Tongue of the Wasatch Formation or the Cretaceous Lance and Allen Ridge Formations because the coal beds in those zones are relatively thin, discontinuous, and have a limited areal extent.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/pp1836","usgsCitation":"Scott, D.C., Shaffer, B.N., Haacke, J.E., Pierce, P.E., and Kinney, S.A., 2019, Coal geology and assessment of resources and reserves in the Little Snake River coal field and Red Desert assessment area, Greater Green River Basin, Wyoming: U.S. Geological Survey Professional Paper 1836, 169 p., https://doi.org/10.3133/pp1836.","productDescription":"xiii, 169 p.","onlineOnly":"Y","ipdsId":"IP-077210","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":370383,"rank":3,"type":{"id":22,"text":"Related Work"},"url":"https://doi.org/10.3133/fs20193053","text":"Assessment of Coal Resources and Reserves in the Little Snake River Coal Field and Red Desert Assessment Area, Greater Green River Basin, Wyoming"},{"id":356626,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/pp/1836/pp1836.pdf","text":"Report","size":"32.0 MB","linkFileType":{"id":1,"text":"pdf"},"description":"PP 1836"},{"id":356625,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/pp/1836/coverthb.jpg"}],"country":"United States","state":"Wyoming","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -111.02783203125,\n              43.14909399920127\n            ],\n            [\n              -111.07177734375,\n              41.02964338716638\n            ],\n            [\n              -108.3251953125,\n              40.9964840143779\n            ],\n            [\n              -106.8310546875,\n              41.02964338716638\n            ],\n            [\n              -105.380859375,\n              41.04621681452063\n            ],\n            [\n              -104.9853515625,\n              41.47566020027821\n            ],\n            [\n              -107.24853515625,\n              42.90816007196054\n            ],\n            [\n              -109.09423828125,\n              43.8028187190472\n            ],\n            [\n              -110.9619140625,\n              43.8503744993026\n            ],\n            [\n              -111.02783203125,\n              43.14909399920127\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"http://energy.usgs.gov/\" data-mce-href=\"http://energy.usgs.gov/\">Central Energy Resources Science Center</a><br>U.S. Geological Survey<br>Box 25046, MS-939<br>Denver, CO 80225-0046</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Regional Structural Trends in the Greater Green River Basin</li><li>Generalized Stratigraphy of the Assessment Area</li><li>Methodology</li><li>Coal Bed Assessment</li><li>Summary</li><li>Acknowledgments</li><li>References Cited</li><li>Glossary</li></ul>","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"publishedDate":"2019-12-19","noUsgsAuthors":false,"publicationDate":"2019-12-19","publicationStatus":"PW","contributors":{"authors":[{"text":"Scott, David C. 0000-0002-7925-7452 dscott@usgs.gov","orcid":"https://orcid.org/0000-0002-7925-7452","contributorId":629,"corporation":false,"usgs":true,"family":"Scott","given":"David","email":"dscott@usgs.gov","middleInitial":"C.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":732228,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Shaffer, Brian N. 0000-0002-8787-7504 bshaffer@usgs.gov","orcid":"https://orcid.org/0000-0002-8787-7504","contributorId":172673,"corporation":false,"usgs":true,"family":"Shaffer","given":"Brian","email":"bshaffer@usgs.gov","middleInitial":"N.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":732231,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Haacke, Jon E. 0000-0002-6910-2852 jhaacke@usgs.gov","orcid":"https://orcid.org/0000-0002-6910-2852","contributorId":630,"corporation":false,"usgs":true,"family":"Haacke","given":"Jon","email":"jhaacke@usgs.gov","middleInitial":"E.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":732229,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Pierce, Paul E. 0000-0001-9675-7320 ppierce@usgs.gov","orcid":"https://orcid.org/0000-0001-9675-7320","contributorId":3732,"corporation":false,"usgs":true,"family":"Pierce","given":"Paul","email":"ppierce@usgs.gov","middleInitial":"E.","affiliations":[],"preferred":true,"id":732233,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kinney, Scott A. 0000-0001-5008-5813 skinney@usgs.gov","orcid":"https://orcid.org/0000-0001-5008-5813","contributorId":1395,"corporation":false,"usgs":true,"family":"Kinney","given":"Scott","email":"skinney@usgs.gov","middleInitial":"A.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":742999,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70214610,"text":"70214610 - 2019 - The burning of biocrusts facilitates the emergence of a bare soil community of poorly-connected chemoheterotrophic bacteria with depressed ecosystem services","interactions":[],"lastModifiedDate":"2020-09-30T13:25:08.224963","indexId":"70214610","displayToPublicDate":"2019-12-19T08:17:43","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3910,"text":"Frontiers in Ecology and Evolution","onlineIssn":"2296-701X","active":true,"publicationSubtype":{"id":10}},"title":"The burning of biocrusts facilitates the emergence of a bare soil community of poorly-connected chemoheterotrophic bacteria with depressed ecosystem services","docAbstract":"<div class=\"JournalAbstract\"><p>Wildfires destabilize biocrust, requiring decades for most biological constituents to regenerate, but bacteria may recover quickly and mitigate the detrimental consequences of burnt soils. To evaluate the short-term recovery of biocrust bacteria, we tracked shifts in bacterial community form and function in Cyanobacteria/lichen-dominated (shrub interspaces) and Cyanobacteria/moss-dominated (beneath<span>&nbsp;</span><i>Artemisia tridentata</i>) biocrusts 1 week, 2 months, and 1 year following a large-scale burn manipulations in a cold desert (Utah, USA). We found no evidence of the burned bacterial community recovering to a burgeoning biocrust. The foundational biocrust phyla, Cyanobacteria, dominated by<span>&nbsp;</span><i>Microcoleus viginatus</i><span>&nbsp;</span>(Microcoleaceae), disappeared from burned soils creating communities void of photosynthetic taxa. One year after the fire, the burned biocrust constituents had eroded away and the bare soils supported the formation of a convergent community of chemoheterotrophic copiotrophs regardless of location. The emergent community was dominated by a previously rare<span>&nbsp;</span><i>Planococcus</i><span>&nbsp;</span>species (family Planococcaceae, Firmicutes) and taxa in the Cellulomonadaceae (Actinobacteria), and Oxalobacteraceae (Betaproteobacteria). Previously burnt soils maintained similar levels of bacterial biomass, alpha diversity, and richness as unburned biocrusts, but supported diffuse, poorly-interconnected communities with 75% fewer species interactions. Nitrogen fixation declined at least 3.5-fold in the burnt soils but ammonium concentrations continued to rise through the year, suggesting that the exhaustion of organic C released from the fire, and not N, may diminish the longevity of the emergent community. Our results demonstrate that biocrust bacteria may recover rapidly after burning, albeit along a different community trajectory, as rare bacteria become dominant, species interconnectedness diminishes, and ecosystem services fail to rebound.</p></div>","language":"English","publisher":"Frontiers","doi":"10.3389/fevo.2019.00467","usgsCitation":"Aanderud, Z.T., Bahr, J., Robinson, D.M., Belnap, J., Campbell, T., Gill, R., McMillian, B., and St. Clair, S.B., 2019, The burning of biocrusts facilitates the emergence of a bare soil community of poorly-connected chemoheterotrophic bacteria with depressed ecosystem services: Frontiers in Ecology and Evolution, v. 7, 467, 14 p., https://doi.org/10.3389/fevo.2019.00467.","productDescription":"467, 14 p.","ipdsId":"IP-112582","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":458924,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3389/fevo.2019.00467","text":"Publisher Index Page"},{"id":378894,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"7","noUsgsAuthors":false,"publicationDate":"2019-12-13","publicationStatus":"PW","contributors":{"authors":[{"text":"Aanderud, Zachary T.","contributorId":176977,"corporation":false,"usgs":false,"family":"Aanderud","given":"Zachary","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":800214,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bahr, Jason","contributorId":241946,"corporation":false,"usgs":false,"family":"Bahr","given":"Jason","email":"","affiliations":[],"preferred":false,"id":800215,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Robinson, David M.","contributorId":241947,"corporation":false,"usgs":false,"family":"Robinson","given":"David","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":800216,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Belnap, Jayne 0000-0001-7471-2279 jayne_belnap@usgs.gov","orcid":"https://orcid.org/0000-0001-7471-2279","contributorId":1332,"corporation":false,"usgs":true,"family":"Belnap","given":"Jayne","email":"jayne_belnap@usgs.gov","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":800217,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Campbell, Tayte","contributorId":176980,"corporation":false,"usgs":false,"family":"Campbell","given":"Tayte","email":"","affiliations":[],"preferred":false,"id":800218,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Gill, Richard 0000-0001-8981-0621","orcid":"https://orcid.org/0000-0001-8981-0621","contributorId":196799,"corporation":false,"usgs":false,"family":"Gill","given":"Richard","email":"","affiliations":[{"id":6681,"text":"Brigham Young University","active":true,"usgs":false}],"preferred":false,"id":800219,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"McMillian, Brock","contributorId":241948,"corporation":false,"usgs":false,"family":"McMillian","given":"Brock","email":"","affiliations":[],"preferred":false,"id":800220,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"St. Clair, Samuel B","contributorId":152583,"corporation":false,"usgs":false,"family":"St. Clair","given":"Samuel","email":"","middleInitial":"B","affiliations":[{"id":590,"text":"U.S. Army Corps of Engineers","active":false,"usgs":false}],"preferred":false,"id":800221,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70208686,"text":"70208686 - 2019 - A comparison of bacteria cultured from unionid mussel hemolymph between stable populations in the upper Mississippi River and a mortality event in the Clinch River","interactions":[],"lastModifiedDate":"2020-10-22T21:13:10.869206","indexId":"70208686","displayToPublicDate":"2019-12-19T07:36:53","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5254,"text":"Freshwater Mollusk Biology and Conservation","active":true,"publicationSubtype":{"id":10}},"title":"A comparison of bacteria cultured from unionid mussel hemolymph between stable populations in the upper Mississippi River and a mortality event in the Clinch River","docAbstract":"The diagnosis of bacterial disease in freshwater unionid mussels has been hindered by a lack of baseline information regarding the microbial communities associated with these animals. In this study, we cultured and identified bacteria from the hemolymph of stable mussel populations from the upper Mississippi River basin and compared results to those from mussel populations experiencing a mortality event in the Clinch River, VA and TN. Several bacterial genera were consistently identified across mussel species and locations, appearing to be part of the natural bacterial flora. One noteworthy bacterial species was identified from the Clinch River: Yokenella regensbergei. Y.regensbergei occurred in relatively high prevalence during the mortality event but was absent from samples acquired after the mortality event. Its role, if any, in the mortality event is unknown but deserves further investigation. We suggest that future studies of freshwater mussel health incorporate hemolymph as a sample type due to its relative separation from the aquatic environment, its role in the circulatory system and the fact that it can be collected nonlethally.","language":"English","publisher":"Freshwater Mollusk Conservation Society","doi":"10.31931/fmbc.v22i2.2019.70–80","usgsCitation":"Leis, E., Erickson, S., Waller, D.L., Richard, J., and Goldberg, T., 2019, A comparison of bacteria cultured from unionid mussel hemolymph between stable populations in the upper Mississippi River and a mortality event in the Clinch River: Freshwater Mollusk Biology and Conservation, v. 22, no. 2, p. 70-80, https://doi.org/10.31931/fmbc.v22i2.2019.70–80.","productDescription":"11 p.","startPage":"70","endPage":"80","ipdsId":"IP-106219","costCenters":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"links":[{"id":372598,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":372645,"rank":2,"type":{"id":15,"text":"Index Page"},"url":"https://bioone.org/journals/freshwater-mollusk-biology-and-conservation/volume-22/issue-2/fmbc.v22i2.2019.70%E2%80%9380/A-Comparison-of-Bacteria-Cultured-from-Unionid-Mussel-Hemolymph-between/10.31931/fmbc.v22i2.2019.70%E2%80%9380.full"}],"country":"United States","otherGeospatial":"Mississippi River basin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -98.4375,\n              28.22697003891834\n            ],\n            [\n              -84.90234375,\n              28.22697003891834\n            ],\n            [\n              -84.90234375,\n              49.26780455063753\n            ],\n            [\n              -98.4375,\n              49.26780455063753\n            ],\n            [\n              -98.4375,\n              28.22697003891834\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"22","issue":"2","publishingServiceCenter":{"id":15,"text":"Madison PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Leis, Eric","contributorId":179325,"corporation":false,"usgs":false,"family":"Leis","given":"Eric","affiliations":[],"preferred":false,"id":782991,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Erickson, Sarah","contributorId":211790,"corporation":false,"usgs":false,"family":"Erickson","given":"Sarah","email":"","affiliations":[{"id":6654,"text":"USFWS","active":true,"usgs":false}],"preferred":false,"id":782992,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Waller, Diane L. 0000-0002-6104-810X dwaller@usgs.gov","orcid":"https://orcid.org/0000-0002-6104-810X","contributorId":5272,"corporation":false,"usgs":true,"family":"Waller","given":"Diane","email":"dwaller@usgs.gov","middleInitial":"L.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":782990,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Richard, Jordan","contributorId":211789,"corporation":false,"usgs":false,"family":"Richard","given":"Jordan","email":"","affiliations":[{"id":6654,"text":"USFWS","active":true,"usgs":false}],"preferred":false,"id":782993,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Goldberg, Tony","contributorId":211788,"corporation":false,"usgs":false,"family":"Goldberg","given":"Tony","affiliations":[{"id":38319,"text":"UW Madison","active":true,"usgs":false}],"preferred":false,"id":782994,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70207598,"text":"70207598 - 2019 - Using maintenance records from a long-term sensor monitoring network to evaluate the relationship between maintenance schedule and data quality","interactions":[],"lastModifiedDate":"2019-12-31T08:35:20","indexId":"70207598","displayToPublicDate":"2019-12-18T16:26:43","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1552,"text":"Environmental Monitoring and Assessment","onlineIssn":"1573-2959","printIssn":"0167-6369","active":true,"publicationSubtype":{"id":10}},"title":"Using maintenance records from a long-term sensor monitoring network to evaluate the relationship between maintenance schedule and data quality","docAbstract":"Sensor-based environmental monitoring networks are beginning to provide the large-scale, long-term data required to address important fundamental and applied questions in ecology. However, the data quality from deployed sensors can be difficult and costly to ensure. In this study, we use maintenance records from the 12-year history of Louisiana’s Coastwide Reference Monitoring System (CRMS) to assess the relationship between various dimensions of data quality and the frequency of field visits to the sensors. We use hierarchical Bayesian models to estimate the probability of missing data, the probability that a corrective offset of the sensor is required, and the magnitude of required offsets for water elevation and salinity data. We compared these estimates to predetermined risk thresholds to the help identify maintenance schedules that balanced the efficient use of labor resources without sacrificing data quality. We found that the relationship between data quality and increasing maintenance interval varied across metrics. Additionally, for most metrics, the maintenance interval when the metric’s credible interval and risk threshold intersected varied throughout the year and with wetland type. These results suggest that complex maintenance schedules, in which field visits vary in frequency throughout the year and with environmental context, are likely to provide the best tradeoff between labor cost and data quality. This analysis demonstrates that quantitative assessment of maintenance records can positively impact the sustainability of long-term data collection projects by helping identify new potential efficiencies in monitoring program management.","language":"English","publisher":"Springer","doi":"10.1007/s10661-019-7967-1","usgsCitation":"Schoolmaster, D.R., and Piazza, S., 2019, Using maintenance records from a long-term sensor monitoring network to evaluate the relationship between maintenance schedule and data quality: Environmental Monitoring and Assessment, v. 192, 54, 14 p., https://doi.org/10.1007/s10661-019-7967-1.","productDescription":"54, 14 p.","ipdsId":"IP-108219","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":370879,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Louisiana 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Jr. 0000-0003-0910-4458","orcid":"https://orcid.org/0000-0003-0910-4458","contributorId":221551,"corporation":false,"usgs":true,"family":"Schoolmaster","given":"Donald","suffix":"Jr.","middleInitial":"R.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":778644,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Piazza, Sarai 0000-0001-6962-9008","orcid":"https://orcid.org/0000-0001-6962-9008","contributorId":221552,"corporation":false,"usgs":true,"family":"Piazza","given":"Sarai","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":778645,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70208715,"text":"70208715 - 2019 - Understanding tidal marsh trajectories: Evaluation of multiple indicators of marsh persistence","interactions":[],"lastModifiedDate":"2020-02-25T15:22:04","indexId":"70208715","displayToPublicDate":"2019-12-18T15:19:44","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1562,"text":"Environmental Research Letters","active":true,"publicationSubtype":{"id":10}},"title":"Understanding tidal marsh trajectories: Evaluation of multiple indicators of marsh persistence","docAbstract":"Robust assessments of ecosystem stability are critical for informing conservation and management decisions. Tidal marsh ecosystems provide vital services, yet are globally threatened by anthropogenic alterations to physical and biological processes. A variety of monitoring and modeling approaches have been undertaken to determine which tidal marshes are likely to persist into the future. Here, we conduct the most robust comparison of marsh metrics to date, building on two foundational studies that had previously and independently developed metrics for marsh condition. We characterized pairs of marshes with contrasting trajectories (of marsh cover ) across six regions of the United States, using a combination of remote-sensing and field-based metrics. We also quantified decadal trends in marsh conversion to mudflat/open water at these twelve marshes. Our results suggest that metrics quantifying the distribution of vegetation across an elevational gradient represent the best indicators of marsh trajectories. The unvegetated to vegetated ratio and flood-ebb sediment differential also served as valuable indicators. No single metric universally predicted marsh trajectories, and therefore a more robust approach includes a suite of spatially integrated, landscape-scale metrics that are mostly obtainable from remote sensing. Data from surface elevation tables and marker horizons revealed that degrading marshes can have higher rates of vertical accretion and elevation gain than more intact counterparts, likely due to longer inundation times potentially combined with internal recycling of material. A high rate of elevation gain relative to local sea-level rise has been considered critical to marsh persistence, but our results suggest that it also may serve as a signature of degradation in marshes that have already begun to deteriorate. This investigation, with rigorous comparison and integration of metrics initially developed independently, tested at a broad geographic scale, provides a model for collaborative science to develop management tools for improving conservation outcomes.","language":"English","publisher":"IOP Science","doi":"10.1088/1748-9326/ab5a94","usgsCitation":"Wasson, K., Ganju, N., Defne, Z., Endris, C., Elsey-Quirk, T., Thorne, K., Freeman, C.M., Guntenspergen, G.R., Nowacki, D.J., and Raposa, K.B., 2019, Understanding tidal marsh trajectories: Evaluation of multiple indicators of marsh persistence: Environmental Research Letters, v. 14, no. 12, 124073, 13 p., https://doi.org/10.1088/1748-9326/ab5a94.","productDescription":"124073, 13 p.","ipdsId":"IP-113125","costCenters":[{"id":678,"text":"Woods Hole Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":458927,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1088/1748-9326/ab5a94","text":"Publisher Index Page"},{"id":372640,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"geometry\": {\n        \"type\": \"MultiPolygon\",\n        \"coordinates\": [\n          [\n            [\n              [\n                -94.81758,\n                49.38905\n              ],\n              [\n                -94.64,\n                48.84\n              ],\n              [\n                -94.32914,\n                48.67074\n              ],\n              [\n                -93.63087,\n                48.60926\n              ],\n              [\n                -92.61,\n                48.45\n              ],\n              [\n                -91.64,\n                48.14\n              ],\n              [\n             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,{"id":70204611,"text":"ofr20191082 - 2019 - Economic analysis for U.S. Geological Survey Coal Basin Assessments","interactions":[],"lastModifiedDate":"2020-01-06T20:11:51","indexId":"ofr20191082","displayToPublicDate":"2019-12-18T14:45:00","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-1082","displayTitle":"Economic Analysis for U.S. Geological Survey Coal Basin Assessments","title":"Economic analysis for U.S. Geological Survey Coal Basin Assessments","docAbstract":"<p>This report presents economic principles and applications as&nbsp;they pertain to the U.S. Geological Survey’s U.S. Coal Resources&nbsp;and Reserves Assessment Project. 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A component of the congressionally mandated National Cooperative Geologic Mapping Program, EDMAP is a partnership among the U.S. Geological Survey, the Association of American State Geologists, and participating colleges and universities that provides mentorship and training opportunities to geology students nationwide. Under the guidance of a faculty member, EDMAP supports upper level undergraduate and graduate students to gain meaningful experience working on 1-year geologic-mapping projects. Between 1996 and 2019, EDMAP funded research projects for more than 1,200 students at more than 160 universities. Every Federal dollar awarded through the EDMAP program is matched by the student’s university.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20193059","usgsCitation":"Ackerman, A., and McPhee, D.K., 2019, U.S. Geological Survey EDMAP Program—Training the next generation of geologic mappers (ver. 1.1, July 2020): U.S. Geological Survey Fact Sheet 2019–3059, 4 p., https://doi.org/10.3133/fs20193059.","productDescription":"4 p.","numberOfPages":"4","ipdsId":"IP-098123","costCenters":[{"id":5061,"text":"National Cooperative Geologic Mapping and Landslide Hazards","active":true,"usgs":true}],"links":[{"id":370408,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2019/3059/coverthb3.jpg"},{"id":370409,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2019/3059/fs20193059_v1.1.pdf","text":"Report","size":"12 MB","linkFileType":{"id":1,"text":"pdf"},"description":"Fact Sheet 2019-3059"},{"id":376389,"rank":3,"type":{"id":25,"text":"Version History"},"url":"https://pubs.usgs.gov/fs/2019/3059/versionHist.txt","size":"2 KB","linkFileType":{"id":2,"text":"txt"}}],"edition":"Version 1.0: December 18, 2019; Version 1.1: July 14, 2020","contact":"<p><a data-mce-href=\"https://www.usgs.gov/core-science-systems/national-cooperative-geologic-mapping-program/connect\" href=\"https://www.usgs.gov/core-science-systems/national-cooperative-geologic-mapping-program/connect\" target=\"_blank\" rel=\"noopener\">Director</a><br><a data-mce-href=\"https://www.usgs.gov/core-science-systems/national-cooperative-geologic-mapping-program\" href=\"https://www.usgs.gov/core-science-systems/national-cooperative-geologic-mapping-program\" target=\"_blank\" rel=\"noopener\">National Cooperative Geologic Mapping Program</a><br><a href=\"https://usgs.gov/\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://usgs.gov\">U.S. Geological Survey</a><br>12201 Sunrise Valley Drive Mail Stop 908<br>Reston, Virginia 20192<br></p>","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"publishedDate":"2019-12-18","revisedDate":"2020-07-14","noUsgsAuthors":false,"publicationDate":"2019-12-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Ackerman, Abby","contributorId":221317,"corporation":false,"usgs":false,"family":"Ackerman","given":"Abby","email":"","affiliations":[{"id":40350,"text":"American Geosciences Institute","active":true,"usgs":false}],"preferred":false,"id":777815,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"McPhee, Darcy 0000-0002-5177-3068 dmcphee@usgs.gov","orcid":"https://orcid.org/0000-0002-5177-3068","contributorId":2621,"corporation":false,"usgs":true,"family":"McPhee","given":"Darcy","email":"dmcphee@usgs.gov","affiliations":[{"id":412,"text":"National Cooperative Geologic Mapping Program","active":false,"usgs":true}],"preferred":true,"id":777814,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70205635,"text":"sim3442 - 2019 - Sedimentation survey of Lago Guayabal, Villalba, Puerto Rico, December 2017","interactions":[],"lastModifiedDate":"2019-12-18T19:58:59","indexId":"sim3442","displayToPublicDate":"2019-12-18T12:55:46","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":333,"text":"Scientific Investigations Map","code":"SIM","onlineIssn":"2329-132X","printIssn":"2329-1311","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"3442","displayTitle":"Sedimentation Survey of Lago Guayabal, Villalba, Puerto Rico, December 2017","title":"Sedimentation survey of Lago Guayabal, Villalba, Puerto Rico, December 2017","docAbstract":"<p>The U.S. Geological Survey, in cooperation with the Puerto Rico Electric Power Authority, conducted a sedimentation survey of Lago Guayabal in 2017 to determine reservoir infill sedimentation rates, generate a bathymetric map of the bottom elevations of the reservoir, and create a stage-volume relation. The original (1913) capacity of Lago Guayabal was 11.82 million cubic meters, and efforts to increase the storage capacity were made in 1950 by the installation of flashboards. The 2017 survey indicated that storage capacity of Lago Guayabal is 4.98 million cubic meters. The estimated full sediment infill of Lago Guayabal is expected in 77 years, based on the long-term sedimentation rate of 0.065 million cubic meters per year determined for the 1972–2017 period.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sim3442","collaboration":"Prepared in cooperation with the Puerto Rico Electric Power Authority","usgsCitation":"Gómez-Fragoso, J.M., and Rosario, M., 2019, Sedimentation survey of Lago Guayabal, Villalba, Puerto Rico, December 2017: U.S. Geological Survey Scientific Investigations Map 3442, 1 sheet, https://doi.org/10.3133/sim3442.","productDescription":"1 Plate: 29.00 x 32.00 inches; Data Release","onlineOnly":"Y","ipdsId":"IP-099137","costCenters":[{"id":27821,"text":"Caribbean-Florida Water Science Center","active":true,"usgs":true}],"links":[{"id":370191,"rank":2,"type":{"id":26,"text":"Sheet"},"url":"https://pubs.usgs.gov/sim/3442/sim3442.pdf","text":"Report","size":"7.55 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIM 3442"},{"id":370190,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sim/3442/coverthb.jpg"},{"id":370192,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://dx.doi.org/10.5066/P9FD12Y5","text":"USGS data release","description":"USGS Data Release","linkHelpText":"Sedimentation survey data for Lago Guayabal, December 2017"}],"otherGeospatial":"Puerto Rico","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -66.51569366455078,\n              18.082058622333665\n            ],\n            [\n              -66.49080276489258,\n              18.082058622333665\n            ],\n            [\n              -66.49080276489258,\n              18.104331760155084\n            ],\n            [\n              -66.51569366455078,\n              18.104331760155084\n            ],\n            [\n              -66.51569366455078,\n              18.082058622333665\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, <a data-mce-href=\"https://www2.usgs.gov/water/caribbeanflorida/index.html\" href=\"https://www2.usgs.gov/water/caribbeanflorida/index.html\">Caribbean-Florida Water Science Center</a> <br>U.S. Geological Survey <br>4446 Pet Lane, Suite 108 <br>Lutz, FL 33559</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Methods of Survey and Analysis</li><li>Storage Capacity, Sedimentation Rate, and Useful Life</li><li>Summary</li><li>Acknowledgments</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"publishedDate":"2019-12-18","noUsgsAuthors":false,"publicationDate":"2019-12-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Gómez-Fragoso, Julieta M. 0000-0002-1080-2950","orcid":"https://orcid.org/0000-0002-1080-2950","contributorId":201641,"corporation":false,"usgs":true,"family":"Gómez-Fragoso","given":"Julieta M.","affiliations":[{"id":27821,"text":"Caribbean-Florida Water Science Center","active":true,"usgs":true}],"preferred":true,"id":771951,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Rosario, Manuel mrosario@usgs.gov","contributorId":5624,"corporation":false,"usgs":true,"family":"Rosario","given":"Manuel","email":"mrosario@usgs.gov","affiliations":[],"preferred":true,"id":777264,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70208434,"text":"70208434 - 2019 - The seasonal energetic landscape of an apex marine carnivore, the polar bear","interactions":[],"lastModifiedDate":"2020-02-10T06:16:28","indexId":"70208434","displayToPublicDate":"2019-12-18T12:25:42","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1465,"text":"Ecology","active":true,"publicationSubtype":{"id":10}},"title":"The seasonal energetic landscape of an apex marine carnivore, the polar bear","docAbstract":"Divergent movement strategies have enabled wildlife populations to adapt to environmental change. In recent decades, the Southern Beaufort Sea subpopulation of polar bears (Ursus maritimus) has developed a divergent movement strategy in response to diminishing sea ice where the majority of the subpopulation (73–85%) stays on the sea ice in summer and the remaining bears move to land. Although declines in sea ice are generally considered a challenge to energy balance in polar bears residing in some regions of the Arctic, little quantitative data exists concerning the seasonal energy expenditures of this apex marine carnivore. We used GPS satellite collars with tri-axial accelerometers and conductivity sensors to measure the location, behavior, and energy expenditure of five adult female polar bears in the southern Beaufort Sea across seasons of sea ice breakup and minimum extent. Using a Bayesian mixed-effects model, we found that energy expenditure was influenced by month, ocean depth, and habitat type (sea ice or land). Total energy expenditure from May to October ranged from 37.7 – 47.2 mJ kg-1 for individual bears. Bears that moved to land expended 7% more energy on average from May to October than bears that remained on the receding sea ice. In August, when bears were moving from the sea ice to land or moving north with the receding pack ice, bears that moved to land spent 7% more time swimming and expended 22% more energy. Meaning the immediate cost of moving to land exceeded the cost of remaining on the receding summer pack ice. These findings suggest a physiological reason why the majority of the Southern Beaufort Sea subpopulation continues to inhabit a diminishing summer ice platform. However, bears that moved to land spent 29% more time in preferred hunting habitats over the continental shelf than bears that remained on the sea ice. Bears on land also had access to subsistence-harvested bowhead whale carcasses. Hence, our findings indicate there may be a greater overall energetic benefit to move to land in this region, which suggests that the use of the diminishing summer sea ice may be functioning as an ecological trap.","language":"English","publisher":"Wiley","doi":"10.1002/ecy.2959","usgsCitation":"Pagano, A.M., Atwood, T.C., Durner, G.M., and Williams, T.M., 2019, The seasonal energetic landscape of an apex marine carnivore, the polar bear: Ecology, e02959, 37 p., https://doi.org/10.1002/ecy.2959.","productDescription":"e02959, 37 p.","ipdsId":"IP-108858","costCenters":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"links":[{"id":372170,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska","otherGeospatial":"Southern Beaufort Sea","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -141.0205078125,\n              69.19379976461904\n            ],\n            [\n              -141.240234375,\n              71.91088787611527\n            ],\n            [\n              -152.4462890625,\n              72.3157853052617\n            ],\n            [\n              -159.4775390625,\n              72.71190310803662\n            ],\n            [\n              -160.8837890625,\n              71.85622888185527\n            ],\n            [\n              -159.5654296875,\n              70.48089578887483\n            ],\n            [\n              -141.0205078125,\n              69.19379976461904\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2020-03-02","publicationStatus":"PW","contributors":{"authors":[{"text":"Pagano, Anthony M. 0000-0003-2176-0909 apagano@usgs.gov","orcid":"https://orcid.org/0000-0003-2176-0909","contributorId":3884,"corporation":false,"usgs":true,"family":"Pagano","given":"Anthony","email":"apagano@usgs.gov","middleInitial":"M.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":781864,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Atwood, Todd C. 0000-0002-1971-3110 tatwood@usgs.gov","orcid":"https://orcid.org/0000-0002-1971-3110","contributorId":4368,"corporation":false,"usgs":true,"family":"Atwood","given":"Todd","email":"tatwood@usgs.gov","middleInitial":"C.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":781865,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Durner, George M. 0000-0002-3370-1191 gdurner@usgs.gov","orcid":"https://orcid.org/0000-0002-3370-1191","contributorId":3576,"corporation":false,"usgs":true,"family":"Durner","given":"George","email":"gdurner@usgs.gov","middleInitial":"M.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":781866,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Williams, Terrie M.","contributorId":191735,"corporation":false,"usgs":false,"family":"Williams","given":"Terrie","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":781867,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70206094,"text":"sir20195121 - 2019 - Simulated water-table and pond-level responses to proposed public water-supply withdrawals in the Hyannis Ponds Wildlife Management Area, Barnstable, Massachusetts","interactions":[],"lastModifiedDate":"2019-12-19T13:54:34","indexId":"sir20195121","displayToPublicDate":"2019-12-18T11:45:00","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-5121","displayTitle":"Simulated Water-Table and Pond-Level Responses to Proposed Public Water-Supply Withdrawals in the Hyannis Ponds Wildlife Management Area, Barnstable, Massachusetts","title":"Simulated water-table and pond-level responses to proposed public water-supply withdrawals in the Hyannis Ponds Wildlife Management Area, Barnstable, Massachusetts","docAbstract":"<p>The glacial kettle ponds in the Hyannis Ponds Wildlife Management Area in Barnstable, Massachusetts, support a community of rare and endangered plants. The ponds are hydraulically connected to the unconfined aquifer that underlies Cape Cod. The plants are adapted to the rise and fall of water levels in the ponds as the water table fluctuates in response to seasonal and year-to-year natural changes in recharge. Pumping from wells for public water supply and recharge of wastewater at water pollution control facilities and septic systems also affect groundwater levels. The Hyannis Water System has proposed to install two additional wells in the Hyannis Ponds Wildlife Management Area and adjust rates of withdrawals and recharge of wastewater return flows for the municipal system that serves the village of Hyannis in the town of Barnstable. The proposal has raised concerns that pumping from the proposed wells could cause long-term average changes in pond levels that could adversely affect the critical pond-shore plant habitat.</p><p>An available three-dimensional steady-state groundwater-flow model was used to simulate the hydrologic effects of nine pumping and wastewater return-flow scenarios prepared by the Hyannis Water System. These effects were quantified by comparison of water levels simulated for the scenarios to water levels simulated for a reference condition based on 2015 withdrawal and wastewater return-flow rates. Maps of water-level responses were prepared to show the effects of pumping from a single well at different locations in the Hyannis Ponds Wildlife Management Area on the water levels of six ponds. Steady-state simulations of the nine scenarios indicated that the shapes of the simulated water-table contours near the wildlife management area changed only slightly at the regional scale, with the largest shifts near the wildlife management area and the Barnstable Water Pollution Control Facility. The simulated changes in pond levels at 10 ponds of interest for the nine scenarios relative to the simulated pond levels for the 2015 reference condition ranged from small increases (less than 0.1 foot) in one pond each in two scenarios to declines (drawdowns) of 1.03–1.11 feet at three ponds in one scenario. Water levels at the Barnstable Water Pollution Control Facility increased because part of the increase in total withdrawals from the Hyannis Water System wells was recharged as wastewater at the water pollution control facility.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20195121","collaboration":"Prepared in cooperation with the Town of Barnstable","usgsCitation":"LeBlanc, D.R., McCobb, T.D., and Barbaro, J.R., 2019, Simulated water-table and pond-level responses to proposed public water-supply withdrawals in the Hyannis Ponds Wildlife Management Area, Barnstable, Massachusetts: U.S. Geological Survey Scientific Investigations Report 2019–5121, 32 p., https://doi.org/10.3133/sir20195121.","productDescription":"Report: vii, 32 p.; Data Release","numberOfPages":"44","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-109032","costCenters":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"links":[{"id":370347,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2019/5121/sir20195121.pdf","text":"Report","size":"3.89 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2019-5121"},{"id":370346,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2019/5121/coverthb.jpg"},{"id":370348,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9U5AKLC","text":"USGS data release","linkHelpText":"MODFLOW2005 groundwater-flow model used to simulate water-supply pumping scenarios near the Hyannis Ponds Wildlife Management Area, Barnstable, Massachusetts"}],"country":"United States","state":"Massachusetts","city":"Barnstable","otherGeospatial":"Hyannis Ponds Wildlife Management Area","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -70.28074264526367,\n              41.67297593102651\n            ],\n            [\n              -70.26091575622559,\n              41.67297593102651\n            ],\n            [\n              -70.26091575622559,\n              41.68771986229327\n            ],\n            [\n              -70.28074264526367,\n              41.68771986229327\n            ],\n            [\n              -70.28074264526367,\n              41.67297593102651\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"mailto:dc_nweng@usgs.gov\" data-mce-href=\"mailto:dc_nweng@usgs.gov\">Director</a>, <a href=\"https://www.usgs.gov/centers/new-england-water\" data-mce-href=\"https://www.usgs.gov/centers/new-england-water\">New England Water Science Center</a><br>U.S. Geological Survey<br>331 Commerce Way, Suite 2<br>Pembroke, NH 03275</p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Pumping and Wastewater Return-Flow Scenarios</li><li>Groundwater Model and Simulation Approach</li><li>Simulated Pond-Level and Water-Table Responses</li><li>Limitations of the Simulations</li><li>Summary and Conclusions</li><li>References Cited</li><li>Appendix 1. Modifications to the Groundwater-Flow Model and Results of the Model Recalibration</li></ul>","publishingServiceCenter":{"id":11,"text":"Pembroke PSC"},"publishedDate":"2019-12-18","noUsgsAuthors":false,"publicationDate":"2019-12-18","publicationStatus":"PW","contributors":{"authors":[{"text":"LeBlanc, Denis R. 0000-0002-4646-2628","orcid":"https://orcid.org/0000-0002-4646-2628","contributorId":219907,"corporation":false,"usgs":true,"family":"LeBlanc","given":"Denis","email":"","middleInitial":"R.","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true},{"id":38175,"text":"Toxics Substances Hydrology Program","active":true,"usgs":true}],"preferred":true,"id":773558,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"McCobb, Timothy D. 0000-0003-1533-847X","orcid":"https://orcid.org/0000-0003-1533-847X","contributorId":219908,"corporation":false,"usgs":true,"family":"McCobb","given":"Timothy D.","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":773559,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Barbaro, Jeffrey R. 0000-0002-6107-2142","orcid":"https://orcid.org/0000-0002-6107-2142","contributorId":219909,"corporation":false,"usgs":true,"family":"Barbaro","given":"Jeffrey","email":"","middleInitial":"R.","affiliations":[{"id":466,"text":"New England Water Science Center","active":true,"usgs":true}],"preferred":true,"id":773560,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70208322,"text":"70208322 - 2019 - Use of subsistence-harvested whale carcasses by polar bears in the southern Beaufort Sea","interactions":[],"lastModifiedDate":"2020-02-04T11:35:19","indexId":"70208322","displayToPublicDate":"2019-12-18T11:33:22","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":894,"text":"Arctic","active":true,"publicationSubtype":{"id":10}},"title":"Use of subsistence-harvested whale carcasses by polar bears in the southern Beaufort Sea","docAbstract":"The availability of a food subsidy has the potential to influence the condition, behavior, fitness, and population dynamics of a species. Since the early 2000s, monitoring efforts along the coast of northern Alaska indicated a higher proportion of polar bears (Ursus maritimus) of the southern Beaufort Sea (SB) subpopulation come onshore and feed at subsistence-harvested bowhead whale (Balaena mysticetus) carcasses during the fall and early winter seasons. This increase in onshore usage by polar bears is a consequence of decreasing sea ice coverage. Concurrently, Indigenous communities annually hunt bowhead whale and deposit the unused remains at localized “bone piles” creating the potential for human-bear interactions. Our objective was to determine the annual number of polar bears feeding at the bone pile near Kaktovik, Alaska. Using a hair snag surrounding the bone pile, we collected hair samples to identify individual bears via microsatellite genotypes during 2011-2014. We used capture-mark-recapture data in the POPAN open-population model to estimate the number of bears visiting the bone pile. We estimated that 146 (SE = 21) bears (sexes combined) used the bone pile in 2012, which represents approximately 16% of the SB polar bear subpopulation. Our results indicated that numerous SB polar bears, males and females, visited the bone pile within a given year. Thus, it will be important to monitor the number of bears using the bone pile and subsequent human-bear interactions and conflicts along the northern coast of Alaska. This is particularly important if polar sea ice continues to recede, which will likely result in increasing numbers of polar bears using the bone pile as a food subsidy.","language":"English","publisher":"Arctic Institute of North America","doi":"10.14430/arctic69449","usgsCitation":"Lillie, K.M., Gese, E.M., Atwood, T.C., and Conner, M.M., 2019, Use of subsistence-harvested whale carcasses by polar bears in the southern Beaufort Sea: Arctic, v. 72, no. 4, p. 337-484, https://doi.org/10.14430/arctic69449.","productDescription":"148 p.","startPage":"337","endPage":"484","ipdsId":"IP-099187","costCenters":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"links":[{"id":458930,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.14430/arctic69449","text":"Publisher Index Page"},{"id":437256,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F78G8HX8","text":"USGS data release","linkHelpText":"Polar Bear Microsatellite Data Southern Beaufort Sea 2010-2013"},{"id":372009,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Alaska ","otherGeospatial":"Southern Beaufort Sea","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -161.455078125,\n              70.31873847853124\n            ],\n            [\n              -140.9765625,\n              68.52823492039876\n            ],\n            [\n              -140.888671875,\n              70.49557354093136\n            ],\n            [\n              -158.466796875,\n              72.04683989379397\n            ],\n            [\n              -161.455078125,\n              70.31873847853124\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"72","issue":"4","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2019-12-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Lillie, Kate M","contributorId":222150,"corporation":false,"usgs":false,"family":"Lillie","given":"Kate","email":"","middleInitial":"M","affiliations":[{"id":6682,"text":"Utah State University","active":true,"usgs":false}],"preferred":false,"id":781408,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Gese, Eric M","contributorId":222151,"corporation":false,"usgs":false,"family":"Gese","given":"Eric","email":"","middleInitial":"M","affiliations":[{"id":6682,"text":"Utah State University","active":true,"usgs":false}],"preferred":false,"id":781409,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Atwood, Todd C. 0000-0002-1971-3110 tatwood@usgs.gov","orcid":"https://orcid.org/0000-0002-1971-3110","contributorId":4368,"corporation":false,"usgs":true,"family":"Atwood","given":"Todd","email":"tatwood@usgs.gov","middleInitial":"C.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true},{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":781407,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Conner, Mary M","contributorId":222152,"corporation":false,"usgs":false,"family":"Conner","given":"Mary","email":"","middleInitial":"M","affiliations":[{"id":6682,"text":"Utah State University","active":true,"usgs":false}],"preferred":false,"id":781410,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70216113,"text":"70216113 - 2019 - Illuminating subduction zone rheological properties in the wake of a giant earthquake","interactions":[],"lastModifiedDate":"2021-04-14T14:01:07.982301","indexId":"70216113","displayToPublicDate":"2019-12-18T08:54:02","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5010,"text":"Science Advances","active":true,"publicationSubtype":{"id":10}},"title":"Illuminating subduction zone rheological properties in the wake of a giant earthquake","docAbstract":"<p><span>Deformation associated with plate convergence at subduction zones is accommodated by a complex system involving fault slip and viscoelastic flow. These processes have proven difficult to disentangle. The 2010&nbsp;</span><i>M</i><sub>w</sub><span>&nbsp;8.8 Maule earthquake occurred close to the Chilean coast within a dense network of continuously recording Global Positioning System stations, which provide a comprehensive history of surface strain. We use these data to assemble a detailed picture of a structurally controlled megathrust fault frictional patchwork and the three-dimensional rheological and time-dependent viscosity structure of the lower crust and upper mantle, all of which control the relative importance of afterslip and viscoelastic relaxation during postseismic deformation. These results enhance our understanding of subduction dynamics including the interplay of localized and distributed deformation during the subduction zone earthquake cycle.</span></p>","language":"English","publisher":"AAAS","doi":"10.1126/sciadv.aax6720","usgsCitation":"Weiss, J., Qiu, Q., Barbot, S., Wright, T.J., Foster, J.H., Saunders, A., Brooks, B.A., Bevis, M., Kendrick, E., Ericksen, T., Avery, J., Smalley, R., Cimbaro, S.R., Lenzano, L.E., Baron, J., Báez, J., and Echalar, A., 2019, Illuminating subduction zone rheological properties in the wake of a giant earthquake: Science Advances, v. 5, no. 12, eaax6720, 12 p., https://doi.org/10.1126/sciadv.aax6720.","productDescription":"eaax6720, 12 p.","ipdsId":"IP-106773","costCenters":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"links":[{"id":458931,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1126/sciadv.aax6720","text":"Publisher Index Page"},{"id":385090,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"5","issue":"12","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Weiss, Jonathan","contributorId":244549,"corporation":false,"usgs":false,"family":"Weiss","given":"Jonathan","affiliations":[{"id":48936,"text":"COMET, School of Earth and Environment, University of Leeds, UK","active":true,"usgs":false}],"preferred":false,"id":804155,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Qiu, Qiang","contributorId":244550,"corporation":false,"usgs":false,"family":"Qiu","given":"Qiang","email":"","affiliations":[{"id":48937,"text":"Earth Observatory of Singapore, Nanyang Technological University, Singapore","active":true,"usgs":false}],"preferred":false,"id":804156,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Barbot, Sylvain","contributorId":244551,"corporation":false,"usgs":false,"family":"Barbot","given":"Sylvain","affiliations":[{"id":48938,"text":"Department of Earth Sciences, University of Southern California, Los Angeles, CA, USA","active":true,"usgs":false}],"preferred":false,"id":804157,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Wright, Tim J.","contributorId":244552,"corporation":false,"usgs":false,"family":"Wright","given":"Tim","email":"","middleInitial":"J.","affiliations":[{"id":48936,"text":"COMET, School of Earth and Environment, University of Leeds, UK","active":true,"usgs":false}],"preferred":false,"id":804158,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Foster, James H.","contributorId":244553,"corporation":false,"usgs":false,"family":"Foster","given":"James","email":"","middleInitial":"H.","affiliations":[{"id":48939,"text":"Hawaii Institute of Geophysics and Planetology, University of Hawaii at Manoa, HI, USA","active":true,"usgs":false}],"preferred":false,"id":804159,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Saunders, Alexander","contributorId":244554,"corporation":false,"usgs":false,"family":"Saunders","given":"Alexander","email":"","affiliations":[{"id":48936,"text":"COMET, School of Earth and Environment, University of Leeds, UK","active":true,"usgs":false}],"preferred":false,"id":804160,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Brooks, Benjamin A. 0000-0001-7954-6281 bbrooks@usgs.gov","orcid":"https://orcid.org/0000-0001-7954-6281","contributorId":5237,"corporation":false,"usgs":true,"family":"Brooks","given":"Benjamin","email":"bbrooks@usgs.gov","middleInitial":"A.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":804161,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Bevis, Michael","contributorId":244555,"corporation":false,"usgs":false,"family":"Bevis","given":"Michael","affiliations":[{"id":48940,"text":"School of Earth Sciences, Ohio State University, Columbus, OH, USA","active":true,"usgs":false}],"preferred":false,"id":804162,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Kendrick, Eric","contributorId":244556,"corporation":false,"usgs":false,"family":"Kendrick","given":"Eric","email":"","affiliations":[{"id":48940,"text":"School of Earth Sciences, Ohio State University, Columbus, OH, USA","active":true,"usgs":false}],"preferred":false,"id":804163,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Ericksen, Todd 0000-0001-9340-575X tericksen@usgs.gov","orcid":"https://orcid.org/0000-0001-9340-575X","contributorId":198145,"corporation":false,"usgs":true,"family":"Ericksen","given":"Todd","email":"tericksen@usgs.gov","affiliations":[],"preferred":true,"id":814239,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Avery, Jonathan","contributorId":244557,"corporation":false,"usgs":false,"family":"Avery","given":"Jonathan","email":"","affiliations":[{"id":48939,"text":"Hawaii Institute of Geophysics and Planetology, University of Hawaii at Manoa, HI, USA","active":true,"usgs":false}],"preferred":false,"id":804164,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Smalley, Robert Jr.","contributorId":244558,"corporation":false,"usgs":false,"family":"Smalley","given":"Robert","suffix":"Jr.","email":"","affiliations":[{"id":48941,"text":"Center for Earthquake Research and Information, University of Memphis, Memphis, TN, USA","active":true,"usgs":false}],"preferred":false,"id":804165,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Cimbaro, Sergio R.","contributorId":244559,"corporation":false,"usgs":false,"family":"Cimbaro","given":"Sergio","email":"","middleInitial":"R.","affiliations":[{"id":48942,"text":"Dirección de Geodesia, Instituto Geográfico Nacional, Buenos Aires, Argentina","active":true,"usgs":false}],"preferred":false,"id":804166,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Lenzano, Luis E.","contributorId":244560,"corporation":false,"usgs":false,"family":"Lenzano","given":"Luis","email":"","middleInitial":"E.","affiliations":[{"id":48943,"text":"International Center for Earth Sciences, Universidad Nacional de Cuyo, Mendoza, Argentina","active":true,"usgs":false}],"preferred":false,"id":804167,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Baron, Jorge","contributorId":244561,"corporation":false,"usgs":false,"family":"Baron","given":"Jorge","email":"","affiliations":[{"id":48943,"text":"International Center for Earth Sciences, Universidad Nacional de Cuyo, Mendoza, Argentina","active":true,"usgs":false}],"preferred":false,"id":804168,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Báez, Juan Carlos","contributorId":244562,"corporation":false,"usgs":false,"family":"Báez","given":"Juan Carlos","affiliations":[{"id":48944,"text":"Centro Sismilógico Nacional, Universidad de Chile, Santiago, Chile","active":true,"usgs":false}],"preferred":false,"id":804169,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Echalar, Arturo","contributorId":244563,"corporation":false,"usgs":false,"family":"Echalar","given":"Arturo","email":"","affiliations":[{"id":48945,"text":"Instituto Geográfico Militar, La Paz, Bolivia","active":true,"usgs":false}],"preferred":false,"id":804170,"contributorType":{"id":1,"text":"Authors"},"rank":17}]}}
,{"id":70207535,"text":"70207535 - 2019 - Influence of turbulence and in-stream structures on the transport and survival of grass carp eggs and larvae at various developmental stages","interactions":[],"lastModifiedDate":"2019-12-23T07:41:05","indexId":"70207535","displayToPublicDate":"2019-12-18T07:38:31","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":873,"text":"Aquatic Sciences","active":true,"publicationSubtype":{"id":10}},"title":"Influence of turbulence and in-stream structures on the transport and survival of grass carp eggs and larvae at various developmental stages","docAbstract":"Understanding the response of grass carp to flow and turbulence regimes during early life stages is fundamental to monitoring and controlling their spread. A comprehensive set of hydrodynamic experiments was conducted with live grass carp eggs and larvae, to better understand their drifting and swimming patterns with 3 different in-stream obstructions: (1) a gravel bump, (2) a single cylinder, and (3) submerged vegetation. The hydrodynamic behavior of eggs and larvae with each obstruction was continuously monitored for about 85 consecutive hours. Transient spatial distributions of the locations of eggs and larvae throughout the water column were generated for each flow scenario. Results show that the active swimming capabilities of larvae allow them to seek areas of low turbulence and low shear stresses, and that eggs are susceptible to damage by high levels of turbulence, which was further corroborated with tests in an oscillating grid-stirred turbulence tank. Our study seeks to better inform field collection of grass carp during early life stages, and to guide the design of alternative approaches to control the dispersal of this invasive species in North America.","language":"English","publisher":"Springer","doi":"10.1007/s00027-019-0689-1","usgsCitation":"Prada, A.F., George, A.E., Stahlschmidt, B.H., Jackson, P.R., Chapman, D., and Tinoco, R.O., 2019, Influence of turbulence and in-stream structures on the transport and survival of grass carp eggs and larvae at various developmental stages: Aquatic Sciences, v. 82, no. 1, 16, 16 p., https://doi.org/10.1007/s00027-019-0689-1.","productDescription":"16, 16 p.","ipdsId":"IP-108300","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":458934,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s00027-019-0689-1","text":"Publisher Index Page"},{"id":437257,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P926SZLN","text":"USGS data release","linkHelpText":"Survival and hydrodynamic behavior of grass carp eggs and larvae in relation to turbulence and in-stream obstructions"},{"id":370628,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"82","issue":"1","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"noUsgsAuthors":false,"publicationDate":"2019-12-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Prada, Andres F.","contributorId":211778,"corporation":false,"usgs":false,"family":"Prada","given":"Andres","email":"","middleInitial":"F.","affiliations":[{"id":38317,"text":"Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL","active":true,"usgs":false}],"preferred":false,"id":778365,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"George, Amy E. 0000-0003-1150-8646 ageorge@usgs.gov","orcid":"https://orcid.org/0000-0003-1150-8646","contributorId":3950,"corporation":false,"usgs":true,"family":"George","given":"Amy","email":"ageorge@usgs.gov","middleInitial":"E.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":778364,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Stahlschmidt, Benjamin H. 0000-0001-6197-662X","orcid":"https://orcid.org/0000-0001-6197-662X","contributorId":211250,"corporation":false,"usgs":true,"family":"Stahlschmidt","given":"Benjamin","email":"","middleInitial":"H.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":778366,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Jackson, P. Ryan 0000-0002-3154-6108 pjackson@usgs.gov","orcid":"https://orcid.org/0000-0002-3154-6108","contributorId":194529,"corporation":false,"usgs":true,"family":"Jackson","given":"P.","email":"pjackson@usgs.gov","middleInitial":"Ryan","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true},{"id":35680,"text":"Illinois-Iowa-Missouri Water Science Center","active":true,"usgs":true},{"id":344,"text":"Illinois Water Science Center","active":true,"usgs":true}],"preferred":true,"id":778367,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Chapman, Duane 0000-0002-1086-8853 dchapman@usgs.gov","orcid":"https://orcid.org/0000-0002-1086-8853","contributorId":1291,"corporation":false,"usgs":true,"family":"Chapman","given":"Duane","email":"dchapman@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true},{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":778368,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Tinoco, Rafael O.","contributorId":211779,"corporation":false,"usgs":false,"family":"Tinoco","given":"Rafael","email":"","middleInitial":"O.","affiliations":[{"id":38317,"text":"Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL","active":true,"usgs":false}],"preferred":false,"id":778369,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70227290,"text":"70227290 - 2019 - Fossilized diatoms of siliceous hydrothermal deposits in Yellowstone National Park, USA","interactions":[],"lastModifiedDate":"2022-01-07T13:14:23.071853","indexId":"70227290","displayToPublicDate":"2019-12-18T07:07:13","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1388,"text":"Diatom Research","active":true,"publicationSubtype":{"id":10}},"title":"Fossilized diatoms of siliceous hydrothermal deposits in Yellowstone National Park, USA","docAbstract":"<div class=\"hlFld-Abstract\"><div class=\"abstractSection abstractInFull\"><p>The study of eukaryotic extremophiles is relatively novel, and, therefore, documentation of the structure and function of micro-organisms in continental hydrothermal systems globally is limited. In this study, we investigate fossil diatoms in siliceous hydrothermal deposits of the Upper Geyser and Yellowstone Lake hydrothermal basins in Yellowstone National Park, and utilize preserved diatom assemblages to infer local environmental conditions. Siliceous sinter from both the Upper Geyser Basin and Yellowstone Lake contains evidence of<span>&nbsp;</span><i>in-situ</i><span>&nbsp;</span>diatom growth within these environments. At Upper Geyser Basin, the assemblage consisted of species that could grow on moist siliceous sinter and was dominated by<span>&nbsp;</span><i>Rhopalodia gibberula</i>. Diatom valves were found in various preservation states, ranging from nearly pristine to highly diagenetically altered. Diatoms collected from siliceous spires in Yellowstone Lake consisted largely of tychoplanktonic and benthic species that were almost certainly growing on the outside of the structure, with an assemblage indicative of relatively shallow, alkaline waters. What remains unclear without access to material for high-resolution dating is whether diatoms colonized the spires during hydrothermal activity or after activity ceased. Our results indicate that diatom frustules can, to some extent, survive alteration in low-temperature (&lt;76°C) hydrothermal environments.</p></div></div>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/0269249X.2019.1698466","usgsCitation":"Brown, S., Fritz, S., Morgan Morzel, L.A., and Shanks, W., 2019, Fossilized diatoms of siliceous hydrothermal deposits in Yellowstone National Park, USA: Diatom Research, v. 34, no. 4, p. 193-204, https://doi.org/10.1080/0269249X.2019.1698466.","productDescription":"12 p.","startPage":"193","endPage":"204","ipdsId":"IP-108931","costCenters":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true},{"id":35995,"text":"Geology, Geophysics, and Geochemistry Science Center","active":true,"usgs":true}],"links":[{"id":394011,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Wyoming","otherGeospatial":"Yellowstone National Park","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -111.09374999999999,\n              43.24520272203356\n            ],\n            [\n              -108.599853515625,\n              43.24520272203356\n            ],\n            [\n              -108.599853515625,\n              45.034714778688624\n            ],\n            [\n              -111.09374999999999,\n              45.034714778688624\n            ],\n            [\n              -111.09374999999999,\n              43.24520272203356\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"34","issue":"4","noUsgsAuthors":false,"publicationDate":"2019-12-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Brown, Sabrina","contributorId":270990,"corporation":false,"usgs":false,"family":"Brown","given":"Sabrina","email":"","affiliations":[{"id":36892,"text":"University of Nebraska","active":true,"usgs":false}],"preferred":false,"id":830315,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fritz, Sherilyn","contributorId":270991,"corporation":false,"usgs":false,"family":"Fritz","given":"Sherilyn","email":"","affiliations":[{"id":36892,"text":"University of Nebraska","active":true,"usgs":false}],"preferred":false,"id":830316,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Morgan Morzel, Lisa Ann 0000-0002-5460-8754","orcid":"https://orcid.org/0000-0002-5460-8754","contributorId":270992,"corporation":false,"usgs":true,"family":"Morgan Morzel","given":"Lisa","email":"","middleInitial":"Ann","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":830317,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Shanks, Wayne (Pat)","contributorId":240838,"corporation":false,"usgs":true,"family":"Shanks","given":"Wayne (Pat)","affiliations":[{"id":35995,"text":"Geology, Geophysics, and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":830318,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70208582,"text":"70208582 - 2019 - Phosphorus runoff risk assessment in karstic regions of the U.S.","interactions":[],"lastModifiedDate":"2020-02-19T20:16:32","indexId":"70208582","displayToPublicDate":"2019-12-17T20:15:23","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5490,"text":"Agricultural & Environmental Letters","onlineIssn":"2471-9625","active":true,"publicationSubtype":{"id":10}},"title":"Phosphorus runoff risk assessment in karstic regions of the U.S.","docAbstract":"The Phosphorus (P) Index risk assessment tool has been widely adopted across the U.S. to identify and rank site vulnerability to P runoff as part of the Natural Resources Conservation Service (NRCS) nutrient management planning (NMP) process. However, limited success has been achieved in addressing the risk of P loss by subsurface flow pathways, despite its relative importance in certain areas of the U.S., particularly in those States dominated by karst terrain. Here we review how States with varying land areas classified as having karst features address the risk of P runoff during the NMP process. Indices adopted in Illinois and Indiana require setbacks (15 – 72 m widths) around surface karst features. The remaining States with karst, address the risk of P loss in NMP development rather than the application of a P Index. Given the spatially variable hydrogeologic properties of karst, technically rigorous field‐scale factors are unlikely to be developed in the near future.","language":"English","publisher":"Wiley","doi":"10.1002/ael2.20001","usgsCitation":"Sharpley, A.N., Hays, P.D., Daniels, M.B., and VanDevender, K.W., 2019, Phosphorus runoff risk assessment in karstic regions of the U.S.: Agricultural & Environmental Letters, v. 5, no. 1, e20001, 8 p., https://doi.org/10.1002/ael2.20001.","productDescription":"e20001, 8 p.","ipdsId":"IP-112871","costCenters":[{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true}],"links":[{"id":458936,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/ael2.20001","text":"Publisher Index Page"},{"id":372432,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"5","issue":"1","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationDate":"2020-02-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Sharpley, Andrew N.","contributorId":189875,"corporation":false,"usgs":false,"family":"Sharpley","given":"Andrew","email":"","middleInitial":"N.","affiliations":[],"preferred":false,"id":782594,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hays, Phillip D. 0000-0001-5491-9272 pdhays@usgs.gov","orcid":"https://orcid.org/0000-0001-5491-9272","contributorId":4145,"corporation":false,"usgs":true,"family":"Hays","given":"Phillip","email":"pdhays@usgs.gov","middleInitial":"D.","affiliations":[{"id":369,"text":"Louisiana Water Science Center","active":true,"usgs":true},{"id":129,"text":"Arkansas Water Science Center","active":true,"usgs":true},{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true}],"preferred":true,"id":782593,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Daniels, Michael B. 0000-0002-6642-0812","orcid":"https://orcid.org/0000-0002-6642-0812","contributorId":222571,"corporation":false,"usgs":false,"family":"Daniels","given":"Michael","email":"","middleInitial":"B.","affiliations":[{"id":6623,"text":"University of Arkansas","active":true,"usgs":false}],"preferred":false,"id":782595,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"VanDevender, Karl W.","contributorId":222572,"corporation":false,"usgs":false,"family":"VanDevender","given":"Karl","email":"","middleInitial":"W.","affiliations":[{"id":6623,"text":"University of Arkansas","active":true,"usgs":false}],"preferred":false,"id":782596,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
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,{"id":70205913,"text":"sir20195107 - 2019 - Determination of study reporting limits for pesticide constituent data for the California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project, 2004–2018—Part 1: National Water Quality Schedules 2003, 2032, or 2033, and 2060","interactions":[],"lastModifiedDate":"2019-12-18T19:52:50","indexId":"sir20195107","displayToPublicDate":"2019-12-17T12:03:49","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-5107","displayTitle":"Determination of Study Reporting Limits for Pesticide Constituent Data for the California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project, 2004–2018—Part 1: National Water Quality Laboratory Schedules 2003, 2032, or 2033, and 2060","title":"Determination of study reporting limits for pesticide constituent data for the California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project, 2004–2018—Part 1: National Water Quality Schedules 2003, 2032, or 2033, and 2060","docAbstract":"<p>The California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project (GAMA-PBP) is a long-term cooperative project designed to assess the quality of groundwater resources used for public and domestic drinking water supplies in the State of California, to monitor and evaluate changes to that quality, to investigate the human and natural factors controlling water quality, and to improve the availability of comprehensive groundwater quality data and information. Between May 18, 2004, and May 3, 2018, the GAMA-PBP collected 3001 groundwater samples for analysis of pesticide constituents by the U.S. Geological Survey (USGS) National Water Quality Laboratory (NWQL)(note that ‘pesticide constituents’ includes parent compounds and degradates). Of these samples, 2994 were analyzed for pesticide constituents on schedules 2003, 2032, or 2033 (65 to 84 constituents), and 840 were analyzed for pesticide constituents on schedule 2060 (58 constituents). The original dataset reported by the NWQL to the USGS National Water Information System (NWIS) database contained a total of 2,688 detections of 78 pesticide constituents and 253,825 non-detections. In this original dataset, 33 percent of the 3,001 samples analyzed had reported detections of one or more pesticide constituents.</p><p>This report describes the GAMA-PBP data-quality objectives for pesticide data, the procedures used to establish study reporting limits, and use of those reporting limits to censor the data from the NWQL so that the final data published by the GAMA-PBP meet these data-quality objectives. The final GAMA-PBP dataset for samples collected from May 2004 to May 2018, after censoring, had a total of 1,632 detections of 37 pesticide constituents. In the final GAMA-PBP dataset, 25 percent of the 3,001 samples analyzed had detections of one or more pesticide constituents.</p><p>The presence of pesticides in groundwater is commonly evaluated by calculating detection frequencies. Detection frequencies for pesticides are sensitive to detection limits and method performance for concentrations near those limits; therefore, the two primary data quality issues addressed in the GAMA-PBP data-quality objectives for pesticides are (1) establishing criteria for classifying data from the laboratory as detections or non-detections for the purpose of data reporting by the project and (2) accounting for changes in analytical methods or method performance over time. The GAMA-PBP addresses these issues by developing study reporting limits that are used as the boundary between detections and non-detections for the reporting of GAMA-PBP results. These reporting limits are defined from method detection limits (MDLs) provided by the NWQL, unless examination of results from laboratory set blanks (LSBs) and GAMA-PBP field blanks indicates that a higher concentration censoring limit is warranted. The GAMA-PBP selected the MDL as the primary choice for defining study reporting limits for consistency with U.S. Environmental Protection Agency (EPA) guidelines for reporting detections of pesticides and other organic constituents.</p><p>A five-step procedure is used to develop study reporting limits and censor the GAMA-PBP dataset accordingly. The effect of the censoring at each step is described to provide information about the relative effect of each step on the overall censoring of the dataset. Steps 1 and 2 can be implemented at the time the data are received, whereas steps 3−5 require information accumulated over an extended period.</p><ul><li>Step 1: Reject results that were most likely the result of specific contamination instances attributable to unusual field or laboratory conditions during sample collection or processing. Two such instances were identified, leading to rejection of 25 detections, which were assigned a data-quality indicator code of “Q” for “reviewed and rejected” in the NWIS database.</li><li>Step 2: Use the NWQL MDLs in effect at the time each sample was analyzed as the reporting limit. A total of 506 detections were censored on this basis.</li><li>Step 3: Use the maximum MDL established by the NWQL during July 2004–August 2018 (MDLmax) as the reporting limit. The rationale for using the MDLmax as the reporting limit is based primarily on the observation that the concentrations of MDLs generally increased over time. A total of 438 detections were censored on this basis.</li><li>Step 4: Use the LSBs to identify periods of greater potential laboratory contamination bias and define raised reporting limits to be used during those periods. These periods were defined by using a moving average detection frequency approach. For consistency with the NWQL procedures for defining raised reporting limits on the basis of detections in LSBs, the raised reporting limits were defined as equal to three times the highest concentration measured in an LSB during the period. A total of 25 detections in groundwater samples analyzed during periods of increased laboratory contamination bias were censored.</li><li>Step 5: Use the LSBs and field blanks to identify potential contamination bias from field or laboratory processes outside of the time periods identified in step 4. The NWQL protocols were used to define the MDLs from blanks analyzed outside of the periods identified in step 4. If an MDL defined from blanks was greater than the MDLmax, the MDL defined from blanks was used to censor the data. One constituent had a study reporting limit defined on this basis, and a total of 62 detections in groundwater samples were censored.</li></ul><p>As of 2019, the USGS NWIS database does not have the capability to store both the original value reported by the NWQL and the final value published by the GAMA-PBP that reflects application of the quality-control censoring described in this report. In the interim, while this capability is developed, the 1,031 results censored in steps 2−5 are blocked from public release in NWIS, and the GAMA-PBP has published the original and final values in a USGS data release accompanying this report. The entire GAMA-PBP final dataset for pesticide constituents on schedules 2003, 2032, or 2033, or on schedule 2060 is publicly available in that USGS data release, through the USGS GAMA-PBP public web portal, and through the California State Water Resources Control Board GAMA public groundwater information system.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20195107","collaboration":"Prepared in cooperation with the California State Water Resources Control Board","usgsCitation":"Fram, M.S., and Stork, S.V., 2019, Determination of study reporting limits for pesticide constituent data for the California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project, 2004–2018—Part 1: National Water Quality Schedules 2003, 2032, or 2033, and 2060: U.S. Geological Survey Scientific Investigations Report 2019–5107, 129 p., https://doi.org/10.3133/sir20195107.","productDescription":"Report: viii, 129 p.; 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 \"}}]}","contact":"<p><a href=\"mailto:dc_ca@usgs.gov\" data-mce-href=\"mailto:dc_ca@usgs.gov\">Director</a>,<br><a href=\"https://ca.water.usgs.gov/\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://ca.water.usgs.gov\">California Water Science Center</a><br><a href=\"https://usgs.gov/\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://usgs.gov\">U.S. Geological Survey</a><br>6000 J Street, Placer Hall<br>Sacramento, California 95819</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>National Water Quality Laboratory Data Reporting Conventions</li><li>GAMA Priority Basin Project Data Quality Objectives for Pesticide Constituents</li><li>Review and Censoring of the GAMA Priority Basin Project Dataset</li><li>GAMA Priority Basin Project Data Reporting</li><li>Summary and Conclusions</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"publishedDate":"2019-12-17","noUsgsAuthors":false,"publicationDate":"2019-12-17","publicationStatus":"PW","contributors":{"authors":[{"text":"Fram, Miranda S. 0000-0002-6337-059X mfram@usgs.gov","orcid":"https://orcid.org/0000-0002-6337-059X","contributorId":1156,"corporation":false,"usgs":true,"family":"Fram","given":"Miranda","email":"mfram@usgs.gov","middleInitial":"S.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":772850,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Stork, Sylvia V. 0000-0002-1994-5560 svstork@usgs.gov","orcid":"https://orcid.org/0000-0002-1994-5560","contributorId":5096,"corporation":false,"usgs":true,"family":"Stork","given":"Sylvia","email":"svstork@usgs.gov","middleInitial":"V.","affiliations":[],"preferred":true,"id":772851,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70206598,"text":"pp1842Y - 2019 - The effects of management practices on grassland birds—Thick-billed Longspur (Rhynchophanes mccownii)","interactions":[{"subject":{"id":70206598,"text":"pp1842Y - 2019 - The effects of management practices on grassland birds—Thick-billed Longspur (Rhynchophanes mccownii)","indexId":"pp1842Y","publicationYear":"2019","noYear":false,"chapter":"Y","displayTitle":"The Effects of Management Practices on Grassland Birds—Thick-billed Longspur (<i>Rhynchophanes mccownii</i>)","title":"The effects of management practices on grassland birds—Thick-billed Longspur (Rhynchophanes mccownii)"},"predicate":"IS_PART_OF","object":{"id":70203022,"text":"pp1842 - 2019 - The effects of management practices on grassland birds","indexId":"pp1842","publicationYear":"2019","noYear":false,"title":"The effects of management practices on grassland birds"},"id":1}],"isPartOf":{"id":70203022,"text":"pp1842 - 2019 - The effects of management practices on grassland birds","indexId":"pp1842","publicationYear":"2019","noYear":false,"title":"The effects of management practices on grassland birds"},"lastModifiedDate":"2023-12-20T21:26:07.204653","indexId":"pp1842Y","displayToPublicDate":"2019-12-17T10:27:12","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":331,"text":"Professional Paper","code":"PP","onlineIssn":"2330-7102","printIssn":"1044-9612","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"1842","chapter":"Y","displayTitle":"The Effects of Management Practices on Grassland Birds—Thick-billed Longspur (<i>Rhynchophanes mccownii</i>)","title":"The effects of management practices on grassland birds—Thick-billed Longspur (Rhynchophanes mccownii)","docAbstract":"<p>The key to <span>Thick-billed </span> Longspur (<i>Rhynchophanes mccownii</i>) management is providing short, sparsely vegetated native grasslands of adequate size. Mixed-grass prairies can be made suitable for breeding <span>Thick-billed </span> Longspurs by implementing moderate-to-heavy or season-long grazing. <span>Thick-billed </span> Longspurs have been reported to use habitats with 5–42 centimeters (cm) average vegetation height, 3–7 cm visual obstruction reading, 15–67 percent grass cover, less than (&lt;) 8 percent forb cover, &lt;7 percent shrub cover, 2–60 percent bare ground, 10–63 percent litter cover, and &lt;5 cm litter depth.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/pp1842Y","usgsCitation":"Shaffer, J.A., Igl, L.D., Johnson, D.H., Sondreal, M.L., Goldade, C.M., Rabie, P.A., Wooten, T.L., and Euliss, B.R., 2019, The effects of management practices on grassland birds—Thick-billed Longspur (<i>Rhynchophanes mccownii</i>) (ver. 1.1, March 2022), chap. Y <i>of</i> Johnson, D.H., Igl, L.D., Shaffer, J.A., and DeLong, J.P., eds., The effects of management practices on grassland birds: U.S. Geological Survey Professional Paper 1842, 10 p., https://doi.org/10.3133/pp1842Y.","productDescription":"iv, 10 p.","numberOfPages":"18","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-095144","costCenters":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":370325,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/pp/1842/y/coverthb2.jpg"},{"id":370326,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/pp/1842/y/pp1842y.pdf","text":"Report","size":"1.93 MB","linkFileType":{"id":1,"text":"pdf"},"description":"PP 1842–Y"},{"id":397826,"rank":3,"type":{"id":25,"text":"Version History"},"url":"https://pubs.usgs.gov/pp/1842/y/versionhist.txt","text":"Version History","size":"1 kB","linkFileType":{"id":2,"text":"txt"}}],"edition":"Version 1.0: December 17, 2019; Version 1.1: March 31, 2022","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/npwrc\" data-mce-href=\"https://www.usgs.gov/centers/npwrc\">Northern Prairie Wildlife Research Center</a> <br>U.S. Geological Survey<br>8711 37th Street Southeast <br>Jamestown, ND 58401</p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Capsule Statement</li><li>Breeding Range</li><li>Suitable Habitat</li><li>Area Requirements and Landscape Associations</li><li>Brood Parasitism by Cowbirds and Other Species</li><li>Breeding-Season Phenology and Site Fidelity</li><li>Species’ Response to Management</li><li>Management Recommendations from the Literature</li><li>References</li></ul>","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"publishedDate":"2019-12-17","revisedDate":"2022-03-31","noUsgsAuthors":false,"publicationDate":"2019-12-17","publicationStatus":"PW","contributors":{"authors":[{"text":"Shaffer, Jill A. 0000-0003-3172-0708","orcid":"https://orcid.org/0000-0003-3172-0708","contributorId":220515,"corporation":false,"usgs":true,"family":"Shaffer","given":"Jill","email":"","middleInitial":"A.","affiliations":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":775097,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Igl, Lawrence D. 0000-0003-0530-7266","orcid":"https://orcid.org/0000-0003-0530-7266","contributorId":220514,"corporation":false,"usgs":true,"family":"Igl","given":"Lawrence D.","affiliations":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":775096,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Johnson, Douglas H. 0000-0002-7778-6641","orcid":"https://orcid.org/0000-0002-7778-6641","contributorId":220516,"corporation":false,"usgs":true,"family":"Johnson","given":"Douglas H.","affiliations":[{"id":480,"text":"Northern Prairie Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":775098,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sondreal, Marriah L.","contributorId":215631,"corporation":false,"usgs":false,"family":"Sondreal","given":"Marriah","email":"","middleInitial":"L.","affiliations":[{"id":39297,"text":"former U.S. Geological Survey employee","active":true,"usgs":false}],"preferred":false,"id":775099,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Goldade, Christopher M.","contributorId":215632,"corporation":false,"usgs":false,"family":"Goldade","given":"Christopher","email":"","middleInitial":"M.","affiliations":[{"id":39297,"text":"former U.S. Geological Survey employee","active":true,"usgs":false}],"preferred":false,"id":775100,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Rabie, Paul A.","contributorId":210022,"corporation":false,"usgs":false,"family":"Rabie","given":"Paul A.","affiliations":[{"id":38051,"text":"Western EcoSystems Technology, Inc.","active":true,"usgs":false}],"preferred":false,"id":775101,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Wooten, Travis L.","contributorId":215633,"corporation":false,"usgs":false,"family":"Wooten","given":"Travis","email":"","middleInitial":"L.","affiliations":[{"id":39297,"text":"former U.S. Geological Survey employee","active":true,"usgs":false}],"preferred":false,"id":775102,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Euliss, Betty R.","contributorId":191881,"corporation":false,"usgs":false,"family":"Euliss","given":"Betty","email":"","middleInitial":"R.","affiliations":[{"id":24583,"text":"former USGS employee","active":true,"usgs":false}],"preferred":false,"id":775103,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70210921,"text":"70210921 - 2019 - Inactivation of viable surrogates for the select agents virulent Newcastle disease virus and highly pathogenic avian influenza virus using either commercial lysis buffer or heat","interactions":[],"lastModifiedDate":"2020-07-03T14:07:41.942112","indexId":"70210921","displayToPublicDate":"2019-12-17T09:05:15","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5970,"text":"Applied Biosafety","active":true,"publicationSubtype":{"id":10}},"title":"Inactivation of viable surrogates for the select agents virulent Newcastle disease virus and highly pathogenic avian influenza virus using either commercial lysis buffer or heat","docAbstract":"<div class=\"NLM_sec NLM_sec_level_1\"><div class=\"sectionInfo\"><h2 class=\"sectionHeading\">Introduction:</h2></div><p>Federal Select Agent Program regulations require laboratories to document a validated procedure for inactivating select agents prior to movement outside registered space. Avian influenza viruses and virulent Newcastle disease virus (vNDV) are cultured in chicken amnio-allantoic fluid (AAF), but the efficacy of commercial lysis buffers to inactivate viruses in protein-rich media has not been documented.</p></div><div class=\"NLM_sec NLM_sec_level_1\"><div class=\"sectionInfo\"><h2 class=\"sectionHeading\">Objectives:</h2></div><p>We assesses the efficacy of MagMAX™ lysis buffer for inactivating highly pathogenic avian influenza virus (HPAIV) and vNDV in chicken AAF and confirm the inactivation of avian influenza in serum using heat.</p></div><div class=\"NLM_sec NLM_sec_level_1\"><div class=\"sectionInfo\"><h2 class=\"sectionHeading\">Methods:</h2></div><p>Low pathogenic avian influenza virus (LPAIV) and avian paramyxovirus subtype-1 (APMV-1) were incubated with lysis buffer and tested for viability. Known viable LPAIV and APMV-1 RNA was extracted from AAF using MagMAX™-96 AI/ND Viral RNA Isolation kit, and the eluate was tested for remaining infectious agent. Finally, inactivation of LPAIV in serum was examined over 3 combinations of temperature and incubation time.</p></div><div class=\"NLM_sec NLM_sec_level_1\"><div class=\"sectionInfo\"><h2 class=\"sectionHeading\">Results:</h2></div><p>MagMAX™ lysis buffer inactivated both LPAIV and APMV-1 in AAF when incubated for 30 minutes at room temperature. The full extraction process eliminated viable virus from the final RNA eluate. LPAIV in serum heated to 70°C for 30 minutes was rendered noninfectious.</p></div><div class=\"NLM_sec NLM_sec_level_1\"><div class=\"sectionInfo\"><h2 class=\"sectionHeading\">Conclusion:</h2></div><p>The ability of a diagnostic laboratory to move samples from one space to another is critical to maintaining biosecurity as well as efficient laboratory workflow. Our study demonstrates a method to ensure the inactivation of viable avian influenza and avian paramyxoviruses in AAF, RNA eluate, and viable avian influenza virus in sera.</p></div>","language":"English","publisher":"Sage","doi":"10.1177/1535676019888920","usgsCitation":"Alger, K.E., Ip, S., Hall, J.S., Nashold, S., Richgels, K., and Smith, C.A., 2019, Inactivation of viable surrogates for the select agents virulent Newcastle disease virus and highly pathogenic avian influenza virus using either commercial lysis buffer or heat: Applied Biosafety, v. 24, no. 4, p. 189-199, https://doi.org/10.1177/1535676019888920.","productDescription":"11 p.","startPage":"189","endPage":"199","ipdsId":"IP-111927","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":458939,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1177/1535676019888920","text":"Publisher Index Page"},{"id":376121,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"24","issue":"4","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Alger, Katrina E. 0000-0001-7708-0203","orcid":"https://orcid.org/0000-0001-7708-0203","contributorId":228815,"corporation":false,"usgs":true,"family":"Alger","given":"Katrina","email":"","middleInitial":"E.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":792142,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ip, S. 0000-0003-4844-7533 hip@usgs.gov","orcid":"https://orcid.org/0000-0003-4844-7533","contributorId":727,"corporation":false,"usgs":true,"family":"Ip","given":"S.","email":"hip@usgs.gov","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":792143,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hall, Jeffrey S. 0000-0001-5599-2826 jshall@usgs.gov","orcid":"https://orcid.org/0000-0001-5599-2826","contributorId":2254,"corporation":false,"usgs":true,"family":"Hall","given":"Jeffrey","email":"jshall@usgs.gov","middleInitial":"S.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":792144,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Nashold, Sean 0000-0002-8869-6633","orcid":"https://orcid.org/0000-0002-8869-6633","contributorId":214978,"corporation":false,"usgs":true,"family":"Nashold","given":"Sean","email":"","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":792145,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Richgels, Katherine 0000-0003-2834-9477 krichgels@usgs.gov","orcid":"https://orcid.org/0000-0003-2834-9477","contributorId":167016,"corporation":false,"usgs":true,"family":"Richgels","given":"Katherine","email":"krichgels@usgs.gov","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":792146,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Smith, Carrie Alison 0000-0002-2684-3407","orcid":"https://orcid.org/0000-0002-2684-3407","contributorId":228816,"corporation":false,"usgs":true,"family":"Smith","given":"Carrie","email":"","middleInitial":"Alison","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":792147,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70215093,"text":"70215093 - 2019 - Migrating bison engineer the green wave","interactions":[],"lastModifiedDate":"2020-10-08T13:43:07.595505","indexId":"70215093","displayToPublicDate":"2019-12-17T08:40:03","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3165,"text":"Proceedings of the National Academy of Sciences of the United States of America","active":true,"publicationSubtype":{"id":10}},"title":"Migrating bison engineer the green wave","docAbstract":"<div id=\"abstract-2\" class=\"section abstract\"><p id=\"p-5\">Newly emerging plants provide the best forage for herbivores. To exploit this fleeting resource, migrating herbivores align their movements to surf the wave of spring green-up. With new technology to track migrating animals, the Green Wave Hypothesis has steadily gained empirical support across a diversity of migratory taxa. This hypothesis assumes the green wave is controlled by variation in climate, weather, and topography, and its progression dictates the timing, pace, and extent of migrations. However, aggregate grazers that are also capable of engineering grassland ecosystems make some of the world’s most impressive migrations, and it is unclear how the green wave determines their movements. Here we show that Yellowstone’s bison (<i>Bison bison</i>) do not choreograph their migratory movements to the wave of spring green-up. Instead, bison modify the green wave as they migrate and graze. While most bison surfed during early spring, they eventually slowed and let the green wave pass them by. However, small-scale experiments indicated that feedback from grazing sustained forage quality. Most importantly, a 6-fold decadal shift in bison density revealed that intense grazing caused grasslands to green up faster, more intensely, and for a longer duration. Our finding broadens our understanding of the ways in which animal movements underpin the foraging benefit of migration. The widely accepted Green Wave Hypothesis needs to be revised to include large aggregate grazers that not only move to find forage, but also engineer plant phenology through grazing, thereby shaping their own migratory movements.</p></div>","language":"English","publisher":"PNAS","doi":"10.1073/pnas.1913783116","usgsCitation":"Geremia, C., Merkle, J., Eacker, D.R., Wallen, R.L., White, P.J., Hebblewhite, M., and Kauffman, M., 2019, Migrating bison engineer the green wave: Proceedings of the National Academy of Sciences of the United States of America, v. 116, no. 51, p. 25707-25713, https://doi.org/10.1073/pnas.1913783116.","productDescription":"7 p.","startPage":"25707","endPage":"25713","ipdsId":"IP-106984","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":458942,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1073/pnas.1913783116","text":"Publisher Index Page"},{"id":379227,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","otherGeospatial":"Yellowstone National Park","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -111.082763671875,\n              42.85985981506279\n            ],\n            [\n              -108.83056640625,\n              42.85985981506279\n            ],\n            [\n              -108.83056640625,\n              44.99588261816546\n            ],\n            [\n              -111.082763671875,\n              44.99588261816546\n            ],\n            [\n              -111.082763671875,\n              42.85985981506279\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"116","issue":"51","noUsgsAuthors":false,"publicationDate":"2019-11-21","publicationStatus":"PW","contributors":{"authors":[{"text":"Geremia, Chris","contributorId":167003,"corporation":false,"usgs":false,"family":"Geremia","given":"Chris","email":"","affiliations":[],"preferred":false,"id":800813,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Merkle, Jerod","contributorId":172972,"corporation":false,"usgs":false,"family":"Merkle","given":"Jerod","affiliations":[{"id":35288,"text":"Wyoming Cooperative Fish and Wildlife Research Unit, University of Wyoming","active":true,"usgs":false}],"preferred":false,"id":800814,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Eacker, Daniel R.","contributorId":189250,"corporation":false,"usgs":false,"family":"Eacker","given":"Daniel","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":800815,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Wallen, Rick L.","contributorId":169529,"corporation":false,"usgs":false,"family":"Wallen","given":"Rick","email":"","middleInitial":"L.","affiliations":[{"id":5106,"text":"National Park Service, Yellowstone National Park, Mammoth, Wyoming 82190","active":true,"usgs":false}],"preferred":false,"id":800816,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"White, P. J.","contributorId":242797,"corporation":false,"usgs":false,"family":"White","given":"P.","email":"","middleInitial":"J.","affiliations":[{"id":36245,"text":"NPS","active":true,"usgs":false}],"preferred":false,"id":800817,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hebblewhite, Mark","contributorId":190188,"corporation":false,"usgs":false,"family":"Hebblewhite","given":"Mark","email":"","affiliations":[],"preferred":false,"id":800818,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Kauffman, Matthew J. 0000-0003-0127-3900 mkauffman@usgs.gov","orcid":"https://orcid.org/0000-0003-0127-3900","contributorId":189179,"corporation":false,"usgs":true,"family":"Kauffman","given":"Matthew J.","email":"mkauffman@usgs.gov","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":506,"text":"Office of the AD Ecosystems","active":true,"usgs":true}],"preferred":false,"id":800819,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70212607,"text":"70212607 - 2019 - Simulating land cover change impacts on groundwater recharge under selected climate projections, Maui, Hawaiʻi","interactions":[],"lastModifiedDate":"2020-08-24T13:35:16.949522","indexId":"70212607","displayToPublicDate":"2019-12-17T08:30:15","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3250,"text":"Remote Sensing","active":true,"publicationSubtype":{"id":10}},"title":"Simulating land cover change impacts on groundwater recharge under selected climate projections, Maui, Hawaiʻi","docAbstract":"<div class=\"art-abstract in-tab hypothesis_container\">This project developed an integrated land cover/hydrological modeling framework using remote sensing and geographic information systems (GIS) data, stakeholder input, climate information and projections, and empirical data to estimate future groundwater recharge on the Island of Maui, Hawaiʻi, USA. End-of-century mean annual groundwater recharge was estimated under four future land cover scenarios: Future 1 (conservation-focused), Future 2 (status-quo), Future 3 (development-focused), and Future 4 (balanced conservation and development), and two downscaled climate projections: a coupled model intercomparison project (CMIP) phase 5 (CMIP5) representative concentration pathway (RCP) 8.5 “dry climate” future and a CMIP3 A1B “wet climate” future. Results were compared to recharge estimated using the 2017 baseline land cover to understand how changing land management and climate could influence groundwater recharge. Estimated recharge increased island-wide under all future land cover and climate combinations and was dominated by specific land cover transitions. For the dry future climate, recharge for land cover Futures 1 to 4 increased by 12%, 0.7%, 0.01%, and 11% relative to 2017 land cover conditions, respectively. Corresponding increases under the wet future climate were 10%, 0.9%, 0.6%, and 9.3%. Conversion from fallow/grassland to diversified agriculture increased irrigation, and therefore recharge. Above the cloud zone (610 m), conversion from grassland to native or alien forest led to increased fog interception, which increased recharge. The greatest changes to recharge occurred in Futures 1 and 4 in areas where irrigation increased, and where forest expanded within the cloud zone. Furthermore, new future urban expansion is currently slated for coastal areas that are already water-stressed and had low recharge projections. This study demonstrated that a spatially-explicit scenario planning process and modeling framework can communicate the possible consequences and tradeoffs of land cover change under a changing climate, and the outputs from this study serve as relevant tools for landscape-level management and interventions.<span>&nbsp;</span></div>","language":"English","publisher":"MDPI","doi":"10.3390/rs11243048","usgsCitation":"Brewington, L., Keener, V., and Mair, A., 2019, Simulating land cover change impacts on groundwater recharge under selected climate projections, Maui, Hawaiʻi: Remote Sensing, v. 11, no. 24, 3048, 23 p., https://doi.org/10.3390/rs11243048.","productDescription":"3048, 23 p.","ipdsId":"IP-114153","costCenters":[{"id":525,"text":"Pacific Islands Water Science Center","active":true,"usgs":true}],"links":[{"id":458944,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3390/rs11243048","text":"Publisher Index Page"},{"id":437258,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P976IWWS","text":"USGS data release","linkHelpText":"Mean annual water-budget components for the Island of Maui, Hawaii, for a set of eight future climate and land-cover scenarios"},{"id":377781,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Hawaii","otherGeospatial":"Maui","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -156.70074462890625,\n              20.53507732696281\n            ],\n            [\n              -155.9454345703125,\n              20.53507732696281\n            ],\n            [\n              -155.9454345703125,\n              21.099875492701216\n            ],\n            [\n              -156.70074462890625,\n              21.099875492701216\n            ],\n            [\n              -156.70074462890625,\n              20.53507732696281\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"11","issue":"24","noUsgsAuthors":false,"publicationDate":"2019-12-17","publicationStatus":"PW","contributors":{"authors":[{"text":"Brewington, Laura","contributorId":239493,"corporation":false,"usgs":false,"family":"Brewington","given":"Laura","email":"","affiliations":[{"id":13398,"text":"East-West Center","active":true,"usgs":false}],"preferred":false,"id":797066,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Keener, Victoria","contributorId":212170,"corporation":false,"usgs":false,"family":"Keener","given":"Victoria","affiliations":[{"id":38447,"text":"East-West Center, Honolulu, Hawai`i","active":true,"usgs":false}],"preferred":false,"id":797067,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Mair, Alan 0000-0003-0302-6647 dmair@usgs.gov","orcid":"https://orcid.org/0000-0003-0302-6647","contributorId":4975,"corporation":false,"usgs":true,"family":"Mair","given":"Alan","email":"dmair@usgs.gov","affiliations":[{"id":525,"text":"Pacific Islands Water Science Center","active":true,"usgs":true}],"preferred":true,"id":797068,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
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