{"pageNumber":"74","pageRowStart":"1825","pageSize":"25","recordCount":68788,"records":[{"id":70252532,"text":"70252532 - 2024 - First Occurrence of the nonindigenous Asian foraminifera Ammonia confertitesta in the Northeastern Pacific Ocean: Vancouver Island, British Columbia, Canada","interactions":[],"lastModifiedDate":"2024-03-28T12:14:20.843095","indexId":"70252532","displayToPublicDate":"2024-03-01T07:12:51","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2735,"text":"Micropaleontology","active":true,"publicationSubtype":{"id":10}},"title":"First Occurrence of the nonindigenous Asian foraminifera Ammonia confertitesta in the Northeastern Pacific Ocean: Vancouver Island, British Columbia, Canada","docAbstract":"<p><span>Observations in 2022 of intertidal and subtidal foraminiferal faunas at four localities along the central-eastern side of Vancouver Island, British Columbia, Canada, and molecular analyses have documented the first occurrence of the nonindigenous Asian species Ammonia confertitesta Zheng in the northwestern Pacific Ocean. The species was present at three of these localities: Davis Lagoon south of Ladysmith (4% in the lagoon and 49% on the beach) and 0.6% in Nanaimo Harbor. The vector of introduction is thought to be the release of ballast water and associated sediment. These releases probably occurred in the Port of Vancouver, which were then transported by means of the cyclonic circulation across the Strait of Georgia, or from local anchorages close to the sampling sites. The timing of the introduction is impossible to determine because no stratigraphic record is presently available. However, foraminiferal studies in the late 1980s near the Port of Vancouver that recovered calcareous taxa did not report the presence of this species, nor was it found at 33 sites sampled from 1997 to 1999 throughout the Strait of Georgia.</span></p>","language":"English","publisher":"MicroPress","doi":"10.47894/mpal.70.2.02","usgsCitation":"McGann, M., and Holzmann, M., 2024, First Occurrence of the nonindigenous Asian foraminifera Ammonia confertitesta in the Northeastern Pacific Ocean: Vancouver Island, British Columbia, Canada: Micropaleontology, v. 70, no. 2, p. 115-127, https://doi.org/10.47894/mpal.70.2.02.","productDescription":"13 p.","startPage":"115","endPage":"127","ipdsId":"IP-144688","costCenters":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":427208,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Canada","otherGeospatial":"Vancouver Island","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -129.8419067578448,\n              51.922502056542896\n            ],\n            [\n              -129.8419067578448,\n              47.81896252074105\n            ],\n            [\n              -122.28331300784477,\n              47.81896252074105\n            ],\n            [\n              -122.28331300784477,\n              51.922502056542896\n            ],\n            [\n              -129.8419067578448,\n              51.922502056542896\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"70","issue":"2","noUsgsAuthors":false,"publicationDate":"2024-03-01","publicationStatus":"PW","contributors":{"authors":[{"text":"McGann, Mary 0000-0002-3057-2945 mmcgann@usgs.gov","orcid":"https://orcid.org/0000-0002-3057-2945","contributorId":169540,"corporation":false,"usgs":true,"family":"McGann","given":"Mary","email":"mmcgann@usgs.gov","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true},{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":897437,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Holzmann, Maria","contributorId":304262,"corporation":false,"usgs":false,"family":"Holzmann","given":"Maria","email":"","affiliations":[{"id":66013,"text":"University of Geneva, Switzerland","active":true,"usgs":false}],"preferred":false,"id":897438,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70251870,"text":"70251870 - 2024 - Implementation of the CREED approach for environmental assessments","interactions":[],"lastModifiedDate":"2024-07-01T14:21:23.001449","indexId":"70251870","displayToPublicDate":"2024-03-01T06:51:52","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2006,"text":"Integrated Environmental Assessment and Management","active":true,"publicationSubtype":{"id":10}},"title":"Implementation of the CREED approach for environmental assessments","docAbstract":"<div class=\"abstract-group  metis-abstract\"><div class=\"article-section__content en main\"><p>Environmental exposure data are a key component of chemical and ecological assessments, supporting and guiding environmental management decisions and regulations. Measures taken to protect the environment based on exposure data can have social and economic implications. Flawed information may lead to measures being taken in the wrong place or to important action not being taken. Although the advantages of harmonizing evaluation methods have been demonstrated for hazard information, no comparable approach is established for exposure data evaluation. The goal of Criteria for Reporting and Evaluating Exposure Datasets (CREED) is to improve the transparency and consistency with which exposure data are evaluated regarding usability in environmental assessments. Here, we describe the synthesis of the CREED process, and propose methods and tools to summarize and interpret the outcomes of the data usability evaluation in support of decision-making and communication. The CREED outcome includes a summary that reports any key gaps or shortcomings in the reliability (data quality) and relevance (fitness for purpose) of the data being considered. The approach has been implemented in a workbook template (provided as&nbsp;Supporting Information), for assessors to readily follow the workflow and create a report card for any given dataset. The report card communicates the outcome of the CREED evaluation and summarizes important dataset attributes, providing a concise reference pertaining to the dataset usability for a specified purpose and documenting data limitations that may restrict data use or increase environmental assessment uncertainty. The application of CREED is demonstrated through three case studies, which also were used during beta testing of the methodology. As experience with the CREED approach application develops, further improvements may be identified and incorporated into the framework. Such development is to be encouraged in the interest of better science and decision-making, and to make environmental monitoring and assessment more cost-effective.<span>&nbsp;</span></p></div></div>","language":"English","publisher":"Society of Environmental Toxicology and Chemistry","doi":"10.1002/ieam.4909","usgsCitation":"Di Paolo, C., Bramke, I., Stauber, J., Whalley, C., Otter, R.R., Verhaegen, Y., Nowell, L.H., and Ryan, A.C., 2024, Implementation of the CREED approach for environmental assessments: Integrated Environmental Assessment and Management, v. 20, no. 4, p. 1019-1034, https://doi.org/10.1002/ieam.4909.","productDescription":"16 p.","startPage":"1019","endPage":"1034","ipdsId":"IP-155929","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":440257,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/ieam.4909","text":"Publisher Index Page"},{"id":426313,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"20","issue":"4","noUsgsAuthors":false,"publicationDate":"2024-07-01","publicationStatus":"PW","contributors":{"authors":[{"text":"Di Paolo, Carolina","contributorId":334529,"corporation":false,"usgs":false,"family":"Di Paolo","given":"Carolina","email":"","affiliations":[{"id":80166,"text":"Dow Benelux B.V., Netherlands","active":true,"usgs":false}],"preferred":false,"id":895873,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bramke, Irene","contributorId":334530,"corporation":false,"usgs":false,"family":"Bramke","given":"Irene","email":"","affiliations":[{"id":80167,"text":"AstraZeneca BV, Netherlands","active":true,"usgs":false}],"preferred":false,"id":895874,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Stauber, Jenny","contributorId":200691,"corporation":false,"usgs":false,"family":"Stauber","given":"Jenny","email":"","affiliations":[],"preferred":false,"id":895875,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Whalley, Caroline","contributorId":334531,"corporation":false,"usgs":false,"family":"Whalley","given":"Caroline","email":"","affiliations":[{"id":80168,"text":"European Environment Agency, Denmark","active":true,"usgs":false}],"preferred":false,"id":895876,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Otter, Ryan R.","contributorId":205916,"corporation":false,"usgs":false,"family":"Otter","given":"Ryan","email":"","middleInitial":"R.","affiliations":[{"id":37193,"text":"Middle Tennessee State University","active":true,"usgs":false}],"preferred":false,"id":895877,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Verhaegen, Yves","contributorId":334532,"corporation":false,"usgs":false,"family":"Verhaegen","given":"Yves","email":"","affiliations":[{"id":80169,"text":"Concawe, Belgium","active":true,"usgs":false}],"preferred":false,"id":895878,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Nowell, Lisa H. 0000-0001-5417-7264 lhnowell@usgs.gov","orcid":"https://orcid.org/0000-0001-5417-7264","contributorId":490,"corporation":false,"usgs":true,"family":"Nowell","given":"Lisa","email":"lhnowell@usgs.gov","middleInitial":"H.","affiliations":[{"id":451,"text":"National Water Quality Assessment Program","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895879,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Ryan, Adam C.","contributorId":175564,"corporation":false,"usgs":false,"family":"Ryan","given":"Adam","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":895880,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70252084,"text":"70252084 - 2024 - River control points for algal productivity revealed by transport analysis","interactions":[],"lastModifiedDate":"2024-03-13T11:45:21.970555","indexId":"70252084","displayToPublicDate":"2024-03-01T06:43:01","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1807,"text":"Geophysical Research Letters","active":true,"publicationSubtype":{"id":10}},"title":"River control points for algal productivity revealed by transport analysis","docAbstract":"<div class=\"article-section__content en main\"><p>Measurement of planktonic chlorophyll-<i>a</i>—a proxy for algal biomass—in rivers may represent local production or algae transported from upstream, confounding understanding of algal bloom development in flowing waters. We modeled 3&nbsp;years of chlorophyll-<i>a</i><span>&nbsp;</span>transport through a 394-km portion of the Illinois River and found that although algal biomass is longitudinally widespread, most net production occurs at river control points in the upper reaches (up to 3.7&nbsp;Mg chlorophyll-<i>a</i>&nbsp;y<sup>−1</sup>&nbsp;km<sup>−1</sup>). Up to 69% of the algal biomass in the upper river was a result of within-reach production, with the remainder recruited from headwaters and tributaries. High chlorophyll-<i>a</i><span>&nbsp;</span>measured farther downstream was largely because of transport from source-area control points, with substantial net losses of algal biomass occurring in the lower river. Modeling the often-overlooked river transport component is necessary to characterize where, when, and why planktonic algae grow and predict how far and fast they move downstream.</p></div>","language":"English","publisher":"American Geophysical Union","doi":"10.1029/2023GL105137","usgsCitation":"Schmadel, N., Harvey, J., Choi, J., Stackpoole, S.M., Graham, J.L., and Murphy, J.C., 2024, River control points for algal productivity revealed by transport analysis: Geophysical Research Letters, v. 51, no. 5, e2023GL105137, 9 p., https://doi.org/10.1029/2023GL105137.","productDescription":"e2023GL105137, 9 p.","ipdsId":"IP-151006","costCenters":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true},{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"links":[{"id":440261,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2023gl105137","text":"Publisher Index Page"},{"id":435029,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P90HH4ML","text":"USGS data release","linkHelpText":"Modeled transport components of daily chlorophyll-a in the Illinois River, 2018 through 2020 (version 1.1, April 2024)"},{"id":426575,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Illinois","otherGeospatial":"Illinois River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -90.27487370571164,\n              38.58275713326145\n            ],\n            [\n              -88.79260162684496,\n              39.90132733013263\n            ],\n            [\n              -88.15161910625382,\n              40.58932852042713\n            ],\n            [\n              -87.59075940073683,\n              40.892859478896895\n            ],\n            [\n              -87.33036025174653,\n              41.854833694469335\n            ],\n            [\n              -87.77103573465293,\n              42.53745121066041\n            ],\n            [\n              -89.19321570221454,\n              42.2415670269576\n            ],\n            [\n              -90.15468948310105,\n              41.17992998036772\n            ],\n            [\n              -91.31647030167187,\n              40.37603324800443\n            ],\n            [\n              -91.5568387468935,\n              39.48517522353134\n            ],\n            [\n              -91.13619396775577,\n              38.83285050932602\n            ],\n            [\n              -90.57533426223881,\n              38.535767277021904\n            ],\n            [\n              -90.27487370571164,\n              38.58275713326145\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"51","issue":"5","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Schmadel, Noah 0000-0002-2046-1694","orcid":"https://orcid.org/0000-0002-2046-1694","contributorId":219105,"corporation":false,"usgs":true,"family":"Schmadel","given":"Noah","email":"","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":896570,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Harvey, Judson 0000-0002-2654-9873","orcid":"https://orcid.org/0000-0002-2654-9873","contributorId":219104,"corporation":false,"usgs":true,"family":"Harvey","given":"Judson","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":896571,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Choi, Jay 0000-0001-6276-133X","orcid":"https://orcid.org/0000-0001-6276-133X","contributorId":334810,"corporation":false,"usgs":true,"family":"Choi","given":"Jay","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":896572,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Stackpoole, Sarah M. 0000-0002-5876-4922 sstackpoole@usgs.gov","orcid":"https://orcid.org/0000-0002-5876-4922","contributorId":3784,"corporation":false,"usgs":true,"family":"Stackpoole","given":"Sarah","email":"sstackpoole@usgs.gov","middleInitial":"M.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":896573,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Graham, Jennifer L. 0000-0002-6420-9335 jlgraham@usgs.gov","orcid":"https://orcid.org/0000-0002-6420-9335","contributorId":1769,"corporation":false,"usgs":true,"family":"Graham","given":"Jennifer","email":"jlgraham@usgs.gov","middleInitial":"L.","affiliations":[{"id":474,"text":"New York Water Science Center","active":true,"usgs":true}],"preferred":true,"id":896574,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Murphy, Jennifer C. 0000-0002-0881-0919 jmurphy@usgs.gov","orcid":"https://orcid.org/0000-0002-0881-0919","contributorId":4281,"corporation":false,"usgs":true,"family":"Murphy","given":"Jennifer","email":"jmurphy@usgs.gov","middleInitial":"C.","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":896575,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70252153,"text":"70252153 - 2024 - Nerodia clarkii (Saltmarsh Watersnake). Predation","interactions":[],"lastModifiedDate":"2024-03-18T11:26:58.907817","indexId":"70252153","displayToPublicDate":"2024-03-01T06:26:03","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1898,"text":"Herpetological Review","active":true,"publicationSubtype":{"id":10}},"title":"Nerodia clarkii (Saltmarsh Watersnake). Predation","docAbstract":"Predators of Nerodia clarkii are suspected to include larger species of crabs, fish, wading birds, snakes, alligators, and crocodiles. To our knowledge, there have only been two published observations of predation on N. clarkii, including a predation attempt from a Callinectes sapidus (Blue Crab) in Mississippi, USA and a successful predation by a Grus americana (Whooping Crane) in Texas, USA. Herein we report on predation of N. clarkii and a suspected Nerodia clarkii x fasciata pictiventris (Saltmarsh Watersnake and Florida Banded Watersnake) hybrid by Crocodylus acutus (American Crocodile) in South Florida, USA.","language":"English","publisher":"Society for the Study of Amphibians and Reptiles","usgsCitation":"Daykin, B.L., Godfrey, S.T., Cherkiss, M., Blakemore, G., and Mazzotti, F., 2024, Nerodia clarkii (Saltmarsh Watersnake). Predation: Herpetological Review, v. 54, no. 3, p. 492-493.","productDescription":"2 p.","startPage":"492","endPage":"493","ipdsId":"IP-145293","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":426723,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://ssarherps.org/herpetological-review-pdfs/"},{"id":426737,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"54","issue":"3","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Daykin, Bryna L.","contributorId":334874,"corporation":false,"usgs":false,"family":"Daykin","given":"Bryna","email":"","middleInitial":"L.","affiliations":[{"id":36221,"text":"University of Florida","active":true,"usgs":false}],"preferred":false,"id":896754,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Godfrey, Sidney T.","contributorId":302877,"corporation":false,"usgs":false,"family":"Godfrey","given":"Sidney","email":"","middleInitial":"T.","affiliations":[{"id":36221,"text":"University of Florida","active":true,"usgs":false}],"preferred":false,"id":896755,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Cherkiss, Michael 0000-0002-7802-6791","orcid":"https://orcid.org/0000-0002-7802-6791","contributorId":222180,"corporation":false,"usgs":true,"family":"Cherkiss","given":"Michael","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":896756,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Blakemore, Gareth","contributorId":334876,"corporation":false,"usgs":false,"family":"Blakemore","given":"Gareth","email":"","affiliations":[{"id":36221,"text":"University of Florida","active":true,"usgs":false}],"preferred":false,"id":896757,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Mazzotti, Frank J.","contributorId":100018,"corporation":false,"usgs":false,"family":"Mazzotti","given":"Frank J.","affiliations":[{"id":12557,"text":"University of Florida, FLREC","active":true,"usgs":false}],"preferred":false,"id":896758,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70257383,"text":"70257383 - 2024 - The incredible HALK: borrowing data for age assignment","interactions":[],"lastModifiedDate":"2024-09-04T16:33:33.021566","indexId":"70257383","displayToPublicDate":"2024-03-01T00:00:00","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5686,"text":"Fisheries Magazine","active":true,"publicationSubtype":{"id":10}},"title":"The incredible HALK: borrowing data for age assignment","docAbstract":"<p><span>Understanding age and growth are important for fisheries science and management; however, age data are not routinely collected for many populations. We propose and test a method of borrowing age–length data across increasingly broader spatiotemporal levels to create a hierarchical age–length key (HALK). We assessed this method by comparing growth and mortality metrics to those estimated from lake–year age–length keys ages using seven common freshwater fish species across the upper Midwestern United States. Levels used for data borrowing began most specifically by borrowing within lake across time and increased in breadth to include data within the Hydrologic Unit Code (HUC) 10 watershed, HUC8 watershed, Level III Ecoregion, and finally a species-wide data ALK using all available data with our study for a species. Median deviation in mean length of age-3 fish was within 1 cm for the most specific HALK levels, and median deviation in total annual mortality was close to 0 for most species when borrowing occurred within HUC10 and HUC8 watersheds. Percent error in growth curves increased with data borrowing, but plateaued—or even decreased—for some species when data borrowing expanded across spatial levels. We present the HALK as a method for gaining age information about a fishery when age data are unavailable.</span></p>","language":"English","publisher":"American Fisheries Society","doi":"10.1002/fsh.11019","usgsCitation":"Frater, P.N., Feiner, Z.S., Hansen, G., Isermann, D.A., Latzka, A.W., and Jensen, O., 2024, The incredible HALK: borrowing data for age assignment: Fisheries Magazine, v. 49, no. 3, p. 117-128, https://doi.org/10.1002/fsh.11019.","productDescription":"12 p.","startPage":"117","endPage":"128","ipdsId":"IP-152013","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":440269,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/fsh.11019","text":"Publisher Index Page"},{"id":433013,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Illinois, Indiana, Iowa, Michigan, Minnesota, South Dakota, Wisconsin","otherGeospatial":"upper Midwest","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -104.34241140551524,\n              49.05094743128561\n            ],\n            [\n              -104.34241140551524,\n              38.11034629510851\n            ],\n            [\n              -84.84599091399372,\n              38.11034629510851\n            ],\n            [\n              -84.84599091399372,\n              49.05094743128561\n            ],\n            [\n              -104.34241140551524,\n              49.05094743128561\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"49","issue":"3","noUsgsAuthors":false,"publicationDate":"2023-12-11","publicationStatus":"PW","contributors":{"authors":[{"text":"Frater, Paul N.","contributorId":342573,"corporation":false,"usgs":false,"family":"Frater","given":"Paul","email":"","middleInitial":"N.","affiliations":[{"id":16925,"text":"University of Wisconsin-Madison","active":true,"usgs":false}],"preferred":false,"id":910198,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Feiner, Zachary S.","contributorId":342575,"corporation":false,"usgs":false,"family":"Feiner","given":"Zachary","email":"","middleInitial":"S.","affiliations":[{"id":16925,"text":"University of Wisconsin-Madison","active":true,"usgs":false}],"preferred":false,"id":910199,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hansen, Gretchen J.A.","contributorId":342577,"corporation":false,"usgs":false,"family":"Hansen","given":"Gretchen J.A.","affiliations":[{"id":37643,"text":"University of Minnesota-Twin Cities","active":true,"usgs":false}],"preferred":false,"id":910200,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Isermann, Daniel A. 0000-0003-1151-9097 disermann@usgs.gov","orcid":"https://orcid.org/0000-0003-1151-9097","contributorId":5167,"corporation":false,"usgs":true,"family":"Isermann","given":"Daniel","email":"disermann@usgs.gov","middleInitial":"A.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":910201,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Latzka, Alexander W.","contributorId":342581,"corporation":false,"usgs":false,"family":"Latzka","given":"Alexander","email":"","middleInitial":"W.","affiliations":[{"id":6913,"text":"Wisconsin Department of Natural Resources","active":true,"usgs":false}],"preferred":false,"id":910202,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Jensen, Olaf P.","contributorId":342584,"corporation":false,"usgs":false,"family":"Jensen","given":"Olaf P.","affiliations":[{"id":16925,"text":"University of Wisconsin-Madison","active":true,"usgs":false}],"preferred":false,"id":910203,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70250564,"text":"sir20235131 - 2024 - Water resources inventory of the Las Cienegas National Conservation Area, southeastern Arizona","interactions":[],"lastModifiedDate":"2026-01-30T19:31:08.947912","indexId":"sir20235131","displayToPublicDate":"2024-02-29T08:10:40","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2023-5131","displayTitle":"Water Resources Inventory of the Las Cienegas National Conservation Area, Southeastern Arizona","title":"Water resources inventory of the Las Cienegas National Conservation Area, southeastern Arizona","docAbstract":"<p>The Las Cienegas National Conservation Area was established by the Las Cienegas National Conservation Area Establishment Act of 1999 (Public Law 106–538) and is managed by the Bureau of Land Management. Located in southeastern Arizona, the conservation area contains more than 45,000 acres of rolling grassland, wetlands, and woodlands surrounded by isolated mountain ranges that are part of the Madrean archipelago. This report describes the surface-water and groundwater resources within, and hydrologically connected to, the conservation area.</p><p>Two primary aquifers have been identified within the Las Cienegas National Conservation Area: a Quaternary alluvial aquifer and a Miocene to Pliocene basin-fill aquifer. The Quaternary alluvial aquifer consists of Quaternary saturated stream alluvium along Cienega Creek and its major tributaries. This aquifer provides the water necessary for base flow in the perennial stream reaches that support aquatic life and for wetland and riparian habitat along the stream courses. Wells and piezometers completed in the Quaternary alluvial aquifer show both seasonal and daily water-level fluctuation patterns, as well as responses to flood flows in Cienega Creek. The basin-fill aquifer, in contrast, consists chiefly of Miocene to Pliocene alluvium within a sedimentary basin that is at least 4,800 feet deep. This aquifer is developed for anthropogenic uses more often than the Quaternary alluvial aquifer is developed. Generally, water levels in wells completed in the basin-fill aquifer have gradually declined a few feet between 2011, when measurements began, and 2022, when this report was written. Most water-chemistry samples available from the basin-fill aquifer had either a sodium-bicarbonate or calcium-bicarbonate water type. Previous research has shown that most recharge to the basin-fill aquifer likely comes from mountain-front and mountain-block recharge. Research further shows that this aquifer likely provides most of the recharge to the Quaternary alluvial aquifer. Because no production wells completed in bedrock exist within the conservation area, little is known about the hydraulic properties of the bedrock therein, but usable quantities of water can likely be produced from places where the bedrock has highly developed joint or fracture systems.</p><p>During 2006–2021, the average combined length of measured perennial stream reaches within the main part of the Las Cienegas National Conservation Area was 6.35 miles. The average annual base flow of Cienega Creek during 2002–2021, estimated with the Standard Base-Flow Index method using data from a streamgage within the conservation area, was 0.62 cubic feet per second. Monthly mean streamflow measured at this streamgage for the same period ranged from a low of 0.29 cubic feet per second (in June) to a high of 9.8 cubic feet per second (in July). The July average is heavily influenced by a flood that occurred in July 2021; the median July streamflow for 2002–2021 is just 0.84 cubic feet per second. Periods with no daily flow are not uncommon at this gage during late May and June.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20235131","collaboration":"Prepared in cooperation with the Bureau of Land Management","usgsCitation":"Mason, J.P., 2024, Water resources inventory of the Las Cienegas National Conservation Area, southeastern Arizona: U.S. Geological Survey Scientific Investigations Report 2023–5131, 31 p., https://doi.org/10.3133/sir20235131.","productDescription":"vii, 31 p.","numberOfPages":"31","onlineOnly":"Y","ipdsId":"IP-144415","costCenters":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"links":[{"id":432298,"rank":6,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9X94P5B","text":"USGS Data Release","description":"Mason, J.P., 2023, Supplemental groundwater level, spring flow, and streamflow data for the Water Resources Inventory of the Las Cienegas National Conservation Area, Southeastern Arizona: U.S. Geological Survey data release, https://doi.org/10.5066/P9X94P5B.","linkHelpText":"Supplemental groundwater level, spring flow, and streamflow data for the Water Resources Inventory of the Las Cienegas National Conservation Area, Southeastern Arizona"},{"id":423631,"rank":1,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2023/5131/sir20235131.pdf","text":"Report","size":"10 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2023-5131"},{"id":499394,"rank":7,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_116143.htm","linkFileType":{"id":5,"text":"html"}},{"id":425761,"rank":5,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2023/5131/covrthb.jpg"},{"id":423634,"rank":4,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2023/5131/sir20235131.xml"},{"id":423633,"rank":3,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2023/5131/images"},{"id":423632,"rank":2,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/sir20235131/full","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"Arizona","otherGeospatial":"Las Cienegas National Conservation Area","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -110.778891765439,\n              31.89756957809155\n            ],\n            [\n              -110.778891765439,\n              31.602822981414448\n            ],\n            [\n              -110.36561821653889,\n              31.602822981414448\n            ],\n            [\n              -110.36561821653889,\n              31.89756957809155\n            ],\n            [\n              -110.778891765439,\n              31.89756957809155\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p><a href=\"https://www.usgs.gov/centers/arizona-water-science-center/connect\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/centers/arizona-water-science-center/connect\">Director</a>,<br><a href=\"https://www.usgs.gov/centers/az-water\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/centers/az-water\">Arizona Water Science Center</a><br><a href=\"https://www.usgs.gov/\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/\">U.S. Geological Survey</a><br>520 N. Park Avenue<br>Tucson, AZ 85719</p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Description of Study Area</li><li>Water Resources</li><li>Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"publishedDate":"2024-02-29","noUsgsAuthors":false,"publicationDate":"2024-02-29","publicationStatus":"PW","contributors":{"authors":[{"text":"Mason, Jon P. 0000-0003-0576-5494 jmason@usgs.gov","orcid":"https://orcid.org/0000-0003-0576-5494","contributorId":215782,"corporation":false,"usgs":true,"family":"Mason","given":"Jon","email":"jmason@usgs.gov","middleInitial":"P.","affiliations":[{"id":128,"text":"Arizona Water Science Center","active":true,"usgs":true}],"preferred":true,"id":890384,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70251782,"text":"sir20245007 - 2024 - Simulation of groundwater and surface-water interaction and lake resiliency at Crystal Lake, City of Crystal Lake, Illinois","interactions":[],"lastModifiedDate":"2026-02-02T22:13:56.769021","indexId":"sir20245007","displayToPublicDate":"2024-02-28T13:37:16","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-5007","displayTitle":"Simulation of Groundwater and Surface Water Interaction and Lake Resiliency at Crystal Lake, City of Crystal Lake, Illinois","title":"Simulation of groundwater and surface-water interaction and lake resiliency at Crystal Lake, City of Crystal Lake, Illinois","docAbstract":"<p>The U.S. Geological Survey, in cooperation with the City of Crystal Lake, Illinois, started a study to increase understanding of groundwater and surface-water interaction between the glacial aquifer and the city’s namesake lake, Crystal Lake, and the effect of higher and lower precipitation conditions on groundwater and lake levels. The results from this study could be used by the city and others to aid in lake management strategies. This report describes the hydrologic lake budget and each of the budget components, which are then used in the construction, calibration, and application of a regional groundwater flow model. The flow model is used to simulate the shallow groundwater flow system and the lake responses to increased and decreased precipitation under the current weir elevation and the proposed lowered weir elevation.</p><p>Using the program groundwater flow analytic element model (GFLOW), a two-dimensional, steady-state model was constructed. The model was calibrated by matching target water levels and stream base flows by adjusting model input parameters. A sensitivity analysis was completed by adjusting the parameters within reasonable ranges and noting the magnitude of changes in model calibration targets. Potential effects of extended wet and dry periods (within historical ranges and published predicted ranges) were evaluated by adjusting precipitation, groundwater recharge, and discharge at Crystal Lake culvert outlet in the model and comparing the resulting simulated lake stage and water budgets to stages and water budgets from the calibrated model.</p><p>Model results under average, wet, and dry conditions with a lowered weir of 1 foot at the Crystal Lake culvert outlet indicate minor changes in the simulated lake-water budgets and associated lake levels and groundwater elevation contours; however, simulations with an increased outflow at the Crystal Lake culvert outlet decreased the lake water levels by as much as 1.87 feet and also decreased the groundwater levels surrounding the lake by about 1–2 feet during average and wet conditions.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20245007","collaboration":"City of Crystal Lake","usgsCitation":"Gahala, A.M., Bristow, E.L.D., Sharpe, J.B., Metcalf, B.G., and Matson, L.A., 2024, Simulation of groundwater and surface-water interaction and lake resiliency at Crystal Lake, City of Crystal Lake, Illinois: U.S. Geological Survey Scientific Investigations Report 2024–5007, 43 p., https://doi.org/10.3133/sir20245007.","productDescription":"Report: vii, 43 p.;3  Data Releases; Database","numberOfPages":"56","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-137122","costCenters":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true}],"links":[{"id":426065,"rank":6,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P92MVOLW","text":"USGS data release","linkHelpText":"Seepage Meter Data Collected at Crystal Lake, City of Crystal Lake, Illinois, 2020"},{"id":426064,"rank":5,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P97BTQZO","text":"USGS data release","linkHelpText":"GFLOW groundwater flow model of Crystal Lake, City of Crystal Lake, Illinois"},{"id":426060,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2024/5007/sir20245007.pdf","text":"Report","size":"3.84 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2024–5007"},{"id":426070,"rank":8,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/sir20245007/full","text":"Report"},{"id":426059,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2024/5007/coverthb.jpg"},{"id":426062,"rank":3,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2024/5007/sir20245007.XML","text":"Report","description":"SIR 2024–5007"},{"id":426063,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2024/5007/images"},{"id":426067,"rank":7,"type":{"id":9,"text":"Database"},"url":"https://doi.org/10.5066/F7P55KJN","text":"USGS National Water Information System database","linkHelpText":"—USGS Water Data for the Nation"},{"id":499421,"rank":9,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_116142.htm","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"Illinois","otherGeospatial":"Crystal Lake","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -88.40229797795483,\n              42.27567643715733\n            ],\n            [\n              -88.40229797795483,\n              42.20603158225242\n            ],\n            [\n              -88.31028234452793,\n              42.20603158225242\n            ],\n            [\n              -88.31028234452793,\n              42.27567643715733\n            ],\n            [\n              -88.40229797795483,\n              42.27567643715733\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/cm-water\" data-mce-href=\"https://www.usgs.gov/centers/cm-water\">Central Midwest Water Science Center</a><br>U.S. Geological Survey<br><span class=\"HQEo7\" role=\"link\" data-markjs=\"true\" data-mce-tabindex=\"0\">405 N Goodwin Ave <br></span><span class=\"HQEo7\" role=\"link\" data-markjs=\"true\" data-mce-tabindex=\"0\">Urbana, IL 61801<br></span><br><a href=\"https://pubs.er.usgs.gov/contact\" data-mce-href=\"https://pubs.er.usgs.gov/contact\">Contact Pubs Warehouse</a>&nbsp;</p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Data Sources</li><li>Development of the Conceptual Model</li><li>Description of the Two-Dimensional Model</li><li>Description of the GFLOW Model for Crystal Lake</li><li>Simulations of Lake Resiliency</li><li>Assumptions and Limitations</li><li>Summary and Conclusions</li><li>References Cited</li><li>Appendix 1. Seepage-Meter Data Collection and Data Analysis</li></ul>","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"publishedDate":"2024-02-28","noUsgsAuthors":false,"publicationDate":"2024-02-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Gahala, Amy M. 0000-0003-2380-2973 agahala@usgs.gov","orcid":"https://orcid.org/0000-0003-2380-2973","contributorId":4396,"corporation":false,"usgs":true,"family":"Gahala","given":"Amy","email":"agahala@usgs.gov","middleInitial":"M.","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895553,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bristow, Emilia L. 0000-0002-7939-166X ebristow@usgs.gov","orcid":"https://orcid.org/0000-0002-7939-166X","contributorId":214538,"corporation":false,"usgs":true,"family":"Bristow","given":"Emilia L.","email":"ebristow@usgs.gov","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895554,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sharpe, Jennifer B. 0000-0002-5192-7848 jbsharpe@usgs.gov","orcid":"https://orcid.org/0000-0002-5192-7848","contributorId":2825,"corporation":false,"usgs":true,"family":"Sharpe","given":"Jennifer","email":"jbsharpe@usgs.gov","middleInitial":"B.","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895555,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Metcalf, Benjamin G 0000-0002-1831-2462 bmetcalf@usgs.gov","orcid":"https://orcid.org/0000-0002-1831-2462","contributorId":221737,"corporation":false,"usgs":true,"family":"Metcalf","given":"Benjamin","email":"bmetcalf@usgs.gov","middleInitial":"G","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895556,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Matson, Lisa A. 0000-0002-5301-6220 lmatson@usgs.gov","orcid":"https://orcid.org/0000-0002-5301-6220","contributorId":334402,"corporation":false,"usgs":true,"family":"Matson","given":"Lisa","email":"lmatson@usgs.gov","middleInitial":"A.","affiliations":[{"id":36532,"text":"Central Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895557,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70251788,"text":"70251788 - 2024 - Physics-based satellite-derived bathymetry (SDB) using Landsat OLI images","interactions":[],"lastModifiedDate":"2024-02-29T13:20:40.255609","indexId":"70251788","displayToPublicDate":"2024-02-28T07:17:56","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3250,"text":"Remote Sensing","active":true,"publicationSubtype":{"id":10}},"title":"Physics-based satellite-derived bathymetry (SDB) using Landsat OLI images","docAbstract":"<div class=\"html-p\">The estimation of depth in optically shallow waters using satellite imagery can be efficient and cost-effective. Active sensors measure the distance traveled by an emitted laser pulse propagating through the water with high precision and accuracy if the bottom peak intensity of the waveform is greater than the noise level. However, passive optical imaging of optically shallow water involves measuring the radiance after the sunlight undergoes downward attenuation on the way to the sea floor, and the reflected light is then attenuated while moving back upward to the water surface. The difficulty of satellite-derived bathymetry (SDB) arises from the fact that the measured radiance is a result of a complex association of physical elements, mainly the optical properties of the water, bottom reflectance, and depth. In this research, we attempt to apply physics-based algorithms to solve this complex problem as accurately as possible to overcome the limitation of having only a few known values from a multispectral sensor. Major analysis components are atmospheric correction, the estimation of water optical properties from optically deep water, and the optimization of bottom reflectance as well as the water depth. Specular reflection of the sky radiance from the water surface is modeled in addition to the typical atmospheric correction. The physical modeling of optically dominant components such as dissolved organic matter, phytoplankton, and suspended particulates allows the inversion of water attenuation coefficients from optically deep pixels. The atmospheric correction and water attenuation results are used in the ocean optical reflectance equation to solve for the bottom reflectance and water depth. At each stage of the solution, physics-based models and a physically valid, constrained Levenberg–Marquardt numerical optimization technique are used. The physics-based algorithm is applied to Landsat Operational Land Imager (OLI) imagery over the shallow coastal zone of Guam, Key West, and Puerto Rico. The SDB depths are compared to airborne lidar depths, and the root mean squared error (RMSE) is mostly less than 2 m over water as deep as 30 m. As the initial choice of bottom reflectance is critical, along with the bottom reflectance library, we describe a pure bottom unmixing method based on eigenvector analysis to estimate unknown site-specific bottom reflectance.</div>","language":"English","publisher":"MDPI","doi":"10.3390/rs16050843","usgsCitation":"Kim, M., Danielson, J.J., Storlazzi, C.D., and Park, S., 2024, Physics-based satellite-derived bathymetry (SDB) using Landsat OLI images: Remote Sensing, v. 16, no. 5, 843, 32 p., https://doi.org/10.3390/rs16050843.","productDescription":"843, 32 p.","ipdsId":"IP-160390","costCenters":[{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true},{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":440274,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3390/rs16050843","text":"Publisher Index Page"},{"id":426123,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"16","issue":"5","noUsgsAuthors":false,"publicationDate":"2024-02-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Kim, Minsu 0000-0003-4472-0926","orcid":"https://orcid.org/0000-0003-4472-0926","contributorId":297371,"corporation":false,"usgs":false,"family":"Kim","given":"Minsu","affiliations":[{"id":54490,"text":"KBR, Inc., under contract to USGS","active":true,"usgs":false}],"preferred":false,"id":895576,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Danielson, Jeffrey J. 0000-0003-0907-034X daniels@usgs.gov","orcid":"https://orcid.org/0000-0003-0907-034X","contributorId":3996,"corporation":false,"usgs":true,"family":"Danielson","given":"Jeffrey","email":"daniels@usgs.gov","middleInitial":"J.","affiliations":[{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true},{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true}],"preferred":true,"id":895577,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Storlazzi, Curt D. 0000-0001-8057-4490","orcid":"https://orcid.org/0000-0001-8057-4490","contributorId":213610,"corporation":false,"usgs":true,"family":"Storlazzi","given":"Curt","middleInitial":"D.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":895578,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Park, Seonkyung 0000-0003-3203-1998 seonkyungpark@contractor.usgs.gov","orcid":"https://orcid.org/0000-0003-3203-1998","contributorId":222488,"corporation":false,"usgs":false,"family":"Park","given":"Seonkyung","email":"seonkyungpark@contractor.usgs.gov","affiliations":[{"id":40547,"text":"United Support Services, Contractor to the USGS Earth Resources Observation and Science (EROS) Center","active":true,"usgs":false}],"preferred":false,"id":895579,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70251736,"text":"sir20245003 - 2024 - Status of water-level altitudes and long-term and short-term water-level changes in the Chicot and Evangeline (undifferentiated) and Jasper aquifers, greater Houston area, Texas, 2023","interactions":[],"lastModifiedDate":"2024-03-22T14:44:40.924129","indexId":"sir20245003","displayToPublicDate":"2024-02-27T18:55:19","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-5003","displayTitle":"Status of Water-Level Altitudes and Long-Term and Short-Term Water-Level Changes in the Chicot and Evangeline (Undifferentiated) and Jasper Aquifers, Greater Houston Area, Texas, 2023","title":"Status of water-level altitudes and long-term and short-term water-level changes in the Chicot and Evangeline (undifferentiated) and Jasper aquifers, greater Houston area, Texas, 2023","docAbstract":"<p>Since the early 1900s, groundwater withdrawn from the primary aquifers that compose the Gulf Coast aquifer system—the Chicot, Evangeline, and Jasper aquifers—has been an important source of water in the greater Houston area, Texas. This report, prepared by the U.S. Geological Survey in cooperation with the Harris-Galveston Subsidence District, City of Houston, Fort Bend Subsidence District, Lone Star Groundwater Conservation District, and Brazoria County Groundwater Conservation District, is one in an annual series of reports depicting the status of water-level altitudes and water-level changes in these aquifers in the greater Houston area.</p><p>In this report, the Chicot and Evangeline aquifers are treated as a single aquifer for the purposes of providing annual assessments of regional-scale water-level altitudes and water-level changes over time. In 2023, shaded depictions of water-level altitudes for the Chicot and Evangeline aquifers (undifferentiated) ranged from about 286 feet (ft) below the North American Vertical Datum of 1988 (NAVD 88) to about 169 ft above NAVD 88. The largest decline in water-level altitudes indicated by the 1977–2023 long-term water-level-change map was in south-central Montgomery County southeast of The Woodlands. In comparison, the 1990–2023 long-term water-level-change map depicts the largest declines in water-level altitudes in localized areas at or near certain wells in parts of northwestern Harris County and south-central Montgomery County. The largest rise in water-level altitudes for 1977–2023 is depicted in a relatively large area in southeastern Harris County, whereas the largest rise in water-level altitudes for 1990–2023 is depicted in a relatively large area in central Harris County. The 5-year short-term water-level-change map depicts the largest declines at three wells in northern Fort Bend County, one well in western Harris County, and three wells in south-central Montgomery County and the largest rise at one well in central Harris County. The 1-year short-term water-level-change map depicts the largest declines at one well in northern Fort Bend County and two wells in southwestern Harris County and the largest rises at one well in northern Brazoria County and one well in south-central Montgomery County.</p><p>In 2023, shaded depictions of water-level altitudes for the Jasper aquifer ranged from about 242 ft below NAVD 88 to about 218 ft above NAVD 88. The 2000–23 long-term water-level-change map depicts water-level declines throughout the study area where water-level-measurement data from the aquifer were collected, with the largest declines in north-central Harris County and south-central Montgomery County south of The Woodlands. The 5-year short-term water-level-change map depicts the largest declines at two wells in central Montgomery County near Conroe and two wells in south-central Montgomery County southeast of The Woodlands and the largest rise at one well in western Montgomery County. The 1-year short-term water-level-change map depicts the largest declines at four wells in south-central Montgomery County southeast of The Woodlands and one well in central Montgomery County near Conroe and the largest rises at two&nbsp;wells in western Montgomery County.<br></p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20245003","issn":"2328-0328","collaboration":"Prepared in cooperation with the Harris-Galveston Subsidence District, City of Houston, Fort Bend Subsidence District, Lone Star Groundwater Conservation District, and Brazoria County Groundwater Conservation District","usgsCitation":"Ramage, J.K., 2024, Status of water-level altitudes and long-term and short-term water-level changes in the Chicot and Evangeline (undifferentiated) and Jasper aquifers, greater Houston area, Texas, 2023: U.S. Geological Survey Scientific Investigations Report 2024–5003, 26 p., https://doi.org/10.3133/sir20245003.","productDescription":"Report: v, 26 p.; 2 Data Releases; Dataset","numberOfPages":"36","onlineOnly":"Y","ipdsId":"IP-153607","costCenters":[{"id":48595,"text":"Oklahoma-Texas Water Science Center","active":true,"usgs":true}],"links":[{"id":425986,"rank":6,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P93CNI6L","text":"USGS data release","linkHelpText":"Groundwater-level altitudes and long-term groundwater-level changes in the Chicot and Evangeline (undifferentiated) and Jasper aquifers, greater Houston area, Texas, 2023"},{"id":425984,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2024/5003/images"},{"id":426891,"rank":8,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/sir20245003/full","description":"SIR 2024-5003 HTML"},{"id":425985,"rank":5,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9T61MT7","text":"USGS data release","linkHelpText":"Depth to groundwater measured from wells in the greater Houston area, Texas, 2023"},{"id":425980,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2024/5003/coverthb.jpg"},{"id":425981,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2024/5003/sir20245003.pdf","size":"18.3 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2024-5003"},{"id":425982,"rank":3,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2024/5003/sir20245003.XML","linkFileType":{"id":8,"text":"xml"},"description":"SIR 2024-5003 XML"},{"id":425987,"rank":7,"type":{"id":28,"text":"Dataset"},"url":"https://doi.org/10.5066/F7P55KJN","text":"USGS National Water Information System database","linkHelpText":"- USGS water data for the Nation"}],"country":"United States","state":"Texas","city":"Houston","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -96,\n              30.5\n            ],\n            [\n              -96,\n              28.75\n            ],\n            [\n              -94.4,\n              28.75\n            ],\n            [\n              -94.4,\n              30.5\n            ],\n            [\n              -96,\n              30.5\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a data-mce-href=\"https://www.usgs.gov/centers/ot-water\" href=\"https://www.usgs.gov/centers/ot-water\">Oklahoma-Texas Water Science Center</a> <br>U.S. Geological Survey<br>1505 Ferguson Lane<br>Austin, TX 78754–4501<br></p><div><a data-mce-href=\"../contact\" href=\"../contact\">Contact Pubs Warehouse</a></div>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Methods</li><li>Water-Level Altitudes and Long-Term and Short-Term Water-Level Changes</li><li>Data Limitations</li><li>Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"publishedDate":"2024-02-28","noUsgsAuthors":false,"publicationDate":"2024-02-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Ramage, Jason K. 0000-0001-8014-2874 jkramage@usgs.gov","orcid":"https://orcid.org/0000-0001-8014-2874","contributorId":3856,"corporation":false,"usgs":true,"family":"Ramage","given":"Jason","email":"jkramage@usgs.gov","middleInitial":"K.","affiliations":[{"id":48595,"text":"Oklahoma-Texas Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895412,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70251860,"text":"70251860 - 2024 - The past, present, and a future for native charr in Japan","interactions":[],"lastModifiedDate":"2024-11-21T16:58:21.714807","indexId":"70251860","displayToPublicDate":"2024-02-27T11:37:46","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5680,"text":"Ichthyological Research","active":true,"publicationSubtype":{"id":10}},"title":"The past, present, and a future for native charr in Japan","docAbstract":"<p><span>Charrs (</span><i>Salvelinus</i><span>) reach their southernmost distribution in Japan, and are uniquely adapted to the short, steep streams of this island archipelago. Southern Asian Dolly Varden (</span><i>Salvelinus curilus</i><span>) occur only in Hokkaido Island, whereas white-spotted charr (</span><i>Salvelinus leucomaenis</i><span>) range to southern Honshu. Both species diverged from an ancestral lineage during the late Pliocene/early Pleistocene, when lowered sea levels created semi-enclosed water bodies in the seas of Japan and Okhotsk. Genetic analyses showed&nbsp;</span><i>S. curilus</i><span>&nbsp;represents the most ancient divergence from the Dolly Varden (</span><i>Salvelinus malma</i><span>) - Arctic charr (</span><i>Salvelinus alpinus</i><span>) group, and revealed five lineages of&nbsp;</span><i>S. leucomaenis</i><span>&nbsp;which align differently than traditional subspecies. Japanese charr display diverse and flexible life histories including anadromous fish with partial migration, and fluvial, adfluvial, and resident forms. In Hokkaido, Dolly Varden are distributed upstream and white-spotted charr downstream. They coexist in narrow sympatric zones through adaptive shifts by Dolly Varden in behavior and morphology that facilitate benthic foraging. Both species hybridize with native and nonnative salmonids, and are displaced from microhabitats and decline in abundance when rainbow trout (</span><i>Oncorhynchus mykiss</i><span>) and brown trout (</span><i>Salmo trutta</i><span>) invade. Japan streams contain over 95,000 erosion control dams which create short stream fragments (medians ~200&nbsp;m). This has increased extirpation of charr populations via lower genetic diversity and stochastic and demographic factors. Tributaries provide complex rearing habitats, afford refuges from floods, and supply recruits that sustain populations in mainstem fragments and create metapopulations in connected riverscapes. Charr play central roles in linked stream-riparian food webs, and cause direct and indirect effects that cascade to streambed algae and riparian predators when linkages are disrupted by anthropogenic effects or altered by native parasites. Many charr populations are threatened by habitat fragmentation and introgression or invasion by nonnative forms, but efforts to conserve charr are growing. These include restoring connectivity among pure populations above barriers that prevent invasions, protecting tributary nurseries, and instituting angling regulations to protect headwater populations. Key steps include inventorying pure populations, identifying conservation units, selecting appropriate management based on connectivity and biotic interactions, and engaging stakeholders and youth to engender an ethic for conserving irreplaceable charr lineages.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s10228-024-00955-3","usgsCitation":"Fausch, K., Morita, K., Tsuboi, J., Kanno, Y., Yamamoto, S., Kishi, D., Dunham, J., Koizumi, I., Hasegawa, K., Inoue, M., Sato, T., and Kitano, S., 2024, The past, present, and a future for native charr in Japan: Ichthyological Research, v. 71, p. 461-485, https://doi.org/10.1007/s10228-024-00955-3.","productDescription":"25 p.","startPage":"461","endPage":"485","ipdsId":"IP-157930","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":440282,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s10228-024-00955-3","text":"Publisher Index Page"},{"id":426241,"rank":2,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Japan","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"MultiPolygon\",\"coordinates\":[[[[134.63843,34.14923],[134.76638,33.80633],[134.20342,33.20118],[133.79295,33.52199],[133.28027,33.28957],[133.01486,32.70457],[132.36311,32.98938],[132.37118,33.46364],[132.92437,34.0603],[133.49297,33.94462],[133.90411,34.36493],[134.63843,34.14923]]],[[[140.97639,37.14207],[140.59977,36.34398],[140.77407,35.84288],[140.25328,35.13811],[138.97553,34.6676],[137.2176,34.60629],[135.79298,33.46481],[135.12098,33.84907],[135.07943,34.59654],[133.34032,34.37594],[132.15677,33.90493],[130.98614,33.88576],[132.00004,33.14999],[131.33279,31.45035],[130.68632,31.02958],[130.20242,31.41824],[130.44768,32.31947],[129.81469,32.61031],[129.40846,33.29606],[130.35394,33.60415],[130.87845,34.23274],[131.88423,34.74971],[132.61767,35.43339],[134.6083,35.73162],[135.67754,35.52713],[136.72383,37.30498],[137.39061,36.82739],[138.8576,37.82748],[139.4264,38.21596],[140.05479,39.43881],[139.88338,40.56331],[140.30578,41.19501],[141.36897,41.37856],[141.91426,39.99162],[141.8846,39.18086],[140.95949,38.174],[140.97639,37.14207]]],[[[143.91016,44.1741],[144.61343,43.96088],[145.32083,44.38473],[145.54314,43.26209],[144.05966,42.98836],[143.18385,41.99521],[141.61149,42.67879],[141.06729,41.58459],[139.95511,41.56956],[139.81754,42.56376],[140.31209,43.33327],[141.38055,43.38882],[141.67195,44.77213],[141.96764,45.55148],[143.14287,44.51036],[143.91016,44.1741]]]]},\"properties\":{\"name\":\"Japan\"}}]}","volume":"71","noUsgsAuthors":false,"publicationDate":"2024-02-27","publicationStatus":"PW","contributors":{"authors":[{"text":"Fausch, K.D. 0000-0001-5825-7560","orcid":"https://orcid.org/0000-0001-5825-7560","contributorId":84097,"corporation":false,"usgs":false,"family":"Fausch","given":"K.D.","affiliations":[],"preferred":false,"id":895819,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Morita, Kentaro","contributorId":224812,"corporation":false,"usgs":false,"family":"Morita","given":"Kentaro","email":"","affiliations":[],"preferred":false,"id":895820,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Tsuboi, Jun-ichi","contributorId":330437,"corporation":false,"usgs":false,"family":"Tsuboi","given":"Jun-ichi","email":"","affiliations":[{"id":78896,"text":"Japan Fisheries Research and Education Agency","active":true,"usgs":false}],"preferred":false,"id":895821,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kanno, Yoichiro","contributorId":210653,"corporation":false,"usgs":false,"family":"Kanno","given":"Yoichiro","affiliations":[{"id":6621,"text":"Colorado State University","active":true,"usgs":false}],"preferred":false,"id":895822,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Yamamoto, Shoichiro","contributorId":334496,"corporation":false,"usgs":false,"family":"Yamamoto","given":"Shoichiro","email":"","affiliations":[{"id":78896,"text":"Japan Fisheries Research and Education Agency","active":true,"usgs":false}],"preferred":false,"id":895823,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Kishi, Daisuke","contributorId":334498,"corporation":false,"usgs":false,"family":"Kishi","given":"Daisuke","email":"","affiliations":[{"id":80156,"text":"Gifu Prefectural Research Institute for Fisheries and Aquatic Environments","active":true,"usgs":false}],"preferred":false,"id":895824,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Dunham, Jason 0000-0002-6268-0633","orcid":"https://orcid.org/0000-0002-6268-0633","contributorId":220078,"corporation":false,"usgs":true,"family":"Dunham","given":"Jason","affiliations":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":895825,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Koizumi, Itsuro","contributorId":224826,"corporation":false,"usgs":false,"family":"Koizumi","given":"Itsuro","affiliations":[{"id":16855,"text":"Hokkaido University","active":true,"usgs":false}],"preferred":false,"id":895826,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Hasegawa, Koh","contributorId":334500,"corporation":false,"usgs":false,"family":"Hasegawa","given":"Koh","email":"","affiliations":[{"id":78896,"text":"Japan Fisheries Research and Education Agency","active":true,"usgs":false}],"preferred":false,"id":895827,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Inoue, Mikio","contributorId":334501,"corporation":false,"usgs":false,"family":"Inoue","given":"Mikio","email":"","affiliations":[{"id":52005,"text":"Ehime University","active":true,"usgs":false}],"preferred":false,"id":895828,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Sato, Takuya","contributorId":26420,"corporation":false,"usgs":false,"family":"Sato","given":"Takuya","email":"","affiliations":[],"preferred":false,"id":895829,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Kitano, Satoshi","contributorId":334502,"corporation":false,"usgs":false,"family":"Kitano","given":"Satoshi","email":"","affiliations":[{"id":80159,"text":"Nagano Environmental Conservation Research Institute","active":true,"usgs":false}],"preferred":false,"id":895830,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70263081,"text":"70263081 - 2024 - Trends in colony sizes for five colonial waterbird species in the Atlantic Flyway","interactions":[],"lastModifiedDate":"2025-01-29T16:22:34.769176","indexId":"70263081","displayToPublicDate":"2024-02-27T10:17:04","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":1,"text":"Federal Government Series"},"seriesTitle":{"id":5373,"text":"Cooperator Science Series","active":true,"publicationSubtype":{"id":1}},"seriesNumber":"155-2024","title":"Trends in colony sizes for five colonial waterbird species in the Atlantic Flyway","docAbstract":"<p><span>Robust estimates of colonial waterbird (CWB) breeding population trends are deficient owing to a lack of range wide, standardized survey efforts. Evaluating conservation priorities and effectiveness of management requires reliable trend estimates across multiple spatial scales. One potential data source for CWB trend estimation is the Colonial Waterbird Database, created in 2003 by U.S. Geological Survey and the U.S. Fish and Wildlife Service and intermittently updated since then. The database combines state or provincial survey data, particularly from the United States Atlantic Flyway, with historical colony counts obtained from publications. We combined recently collected survey data from Atlantic Flyway states and provinces with data archived in the database to generate population size trend estimates for five species: Double-crested Cormorant (<i>Phalacrocorax auritus</i>), Laughing Gull (<i>Leucophaeus atricilla</i>), Least Tern (<i>Sternula antillarum</i>), Common Tern (<i>Sterna hirundo</i>), and Black Skimmer (<i>Rynchops niger</i>). These species represent two actively managed conflict species and three species of conservation concern, respectively. We used mixed effects models to fit an exponential growth model to determine yearly trends in populations at Atlantic Flyway- and state-scales with survey data collected between 1964 and 2019. Direction of within-state trend estimates varied. Trends for some species (Common Tern, Laughing Gull) were increasing in northern states and decreasing further south. At the Flyway scale, Double-crested Cormorant increased (2.08 ± 0.28 % year-1) and Least Tern (-1.40 ± 0.36 % year-1) and Black Skimmer (-1.13 ± 0.68 % year -1) decreased, while Flyway-scale trends in Common Tern and Laughing Gull were not significant. Our analysis provides cross-state trend estimates to inform CWB management actions along the Atlantic Flyway.</span></p>","language":"English","publisher":"U.S. Fish and Wildlife Service","usgsCitation":"Loman, Z., Loftin, C., Spiegel, C., and Boettcher, R., 2024, Trends in colony sizes for five colonial waterbird species in the Atlantic Flyway: Cooperator Science Series 155-2024, Report: ii, 46 p.; Appendix.","productDescription":"Report: ii, 46 p.; Appendix","ipdsId":"IP-122759","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":481434,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.fws.gov/media/trends-colony-sizes-five-colonial-waterbird-species-atlantic-flyway"},{"id":481463,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Loman, Zachary G.","contributorId":145932,"corporation":false,"usgs":false,"family":"Loman","given":"Zachary G.","affiliations":[],"preferred":false,"id":925474,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Loftin, Cynthia S. 0000-0001-9104-3724 cyndy_loftin@usgs.gov","orcid":"https://orcid.org/0000-0001-9104-3724","contributorId":2167,"corporation":false,"usgs":true,"family":"Loftin","given":"Cynthia S.","email":"cyndy_loftin@usgs.gov","affiliations":[],"preferred":true,"id":925473,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Spiegel, Caleb S.","contributorId":350196,"corporation":false,"usgs":false,"family":"Spiegel","given":"Caleb S.","affiliations":[{"id":36188,"text":"U.S. Fish and Wildlife Service","active":true,"usgs":false}],"preferred":false,"id":925475,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Boettcher, Ruth","contributorId":350198,"corporation":false,"usgs":false,"family":"Boettcher","given":"Ruth","affiliations":[{"id":83696,"text":"Virginia Division of Wildlife Resources","active":true,"usgs":false}],"preferred":false,"id":925476,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70251828,"text":"70251828 - 2024 - Geese migrating over the Pacific Ocean select altitudes coinciding with offshore wind turbine blades","interactions":[],"lastModifiedDate":"2024-05-20T15:25:06.169475","indexId":"70251828","displayToPublicDate":"2024-02-27T07:02:34","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2163,"text":"Journal of Applied Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Geese migrating over the Pacific Ocean select altitudes coinciding with offshore wind turbine blades","docAbstract":"<ol class=\"\"><li>Renewable energy facilities are a key part of mitigating climate change, but can pose threats to wild birds and bats, most often through collisions with infrastructure. Understanding collision risk and the factors affecting it can help minimize impacts on wild populations. For wind turbines, flight altitude is a major factor influencing collision risk, and altitude-selection analyses can evaluate when and why animals fly at certain altitudes under certain conditions.</li><li>We used GPS tags to track Pacific Flyway geese (Pacific greater white-fronted goose, tule greater white-fronted goose and lesser snow goose) on transoceanic migrations between Alaska and the Pacific Coast of the contiguous United States, an area where offshore windfarm development is beginning. We evaluated how geographic and environmental covariates affected (1) whether birds were at rest on the water versus in flight (binomial model) and (2) altitude selection when in flight (similar to a step-selection framework). We then used a Monte Carlo simulation to predict the probability of flying at each altitude under various conditions, considering both the fly/rest decision and altitude selection.</li><li>In both spring and fall, geese showed strong selection for altitudes within the expected rotor-swept zone (20–200 m asl), with 56% of locations expected to be within the rotor-swept zone under mean daylight conditions and 28% at night. This indicates a high possibility that migrating geese may be at risk of collision when passing through windfarms. Although there was some variation across subspecies, geese were most likely to be within the rotor-swept zone with little wind or light tailwinds, low clouds, little to no precipitation and moderate to cool air temperatures. Geese were unlikely to be in the rotor-swept zone at night, when most individuals were at rest on the water.</li><li><i>Synthesis and applications</i>. These results could be used to inform windfarm management, including decisions to shut down turbines when collision risk is high. The altitude-selection framework we demonstrate could facilitate further study of other bird species to develop a holistic view of how windfarms in this area could affect the migratory bird community as a whole.</li></ol>","language":"English","publisher":"British Ecological Society","doi":"10.1111/1365-2664.14612","usgsCitation":"Weiser, E.L., Overton, C.T., Douglas, D.C., Casazza, M.L., and Flint, P.L., 2024, Geese migrating over the Pacific Ocean select altitudes coinciding with offshore wind turbine blades: Journal of Applied Ecology, v. 61, no. 5, p. 951-962, https://doi.org/10.1111/1365-2664.14612.","productDescription":"12 p.","startPage":"951","endPage":"962","ipdsId":"IP-156883","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true},{"id":65299,"text":"Alaska Science Center Ecosystems","active":true,"usgs":true}],"links":[{"id":486320,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P13DPZGS","text":"USGS data release","linkHelpText":"Movements of Black Brant Tagged While Molting in the National Petroleum Reserve - Alaska"},{"id":440291,"rank":3,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/1365-2664.14612","text":"Publisher Index Page"},{"id":435032,"rank":2,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P17VOLEY","text":"USGS data release","linkHelpText":"Scripts to Analyze Altitude Selection in Migrating Pacific Flyway Geese"},{"id":435031,"rank":2,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9VUN0Q9","text":"USGS data release","linkHelpText":"Movement Data for Migrating Geese Over the Northeast Pacific Ocean, 2018-2021"},{"id":426170,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"61","issue":"5","noUsgsAuthors":false,"publicationDate":"2024-02-27","publicationStatus":"PW","contributors":{"authors":[{"text":"Weiser, Emily L. 0000-0003-1598-659X","orcid":"https://orcid.org/0000-0003-1598-659X","contributorId":206605,"corporation":false,"usgs":true,"family":"Weiser","given":"Emily","email":"","middleInitial":"L.","affiliations":[{"id":65299,"text":"Alaska Science Center Ecosystems","active":true,"usgs":true}],"preferred":true,"id":895757,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Overton, Cory T. 0000-0002-5060-7447 coverton@usgs.gov","orcid":"https://orcid.org/0000-0002-5060-7447","contributorId":3262,"corporation":false,"usgs":true,"family":"Overton","given":"Cory","email":"coverton@usgs.gov","middleInitial":"T.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":895758,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Douglas, David C. 0000-0003-0186-1104 ddouglas@usgs.gov","orcid":"https://orcid.org/0000-0003-0186-1104","contributorId":2388,"corporation":false,"usgs":true,"family":"Douglas","given":"David","email":"ddouglas@usgs.gov","middleInitial":"C.","affiliations":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"preferred":true,"id":895759,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Casazza, Michael L. 0000-0002-5636-735X mike_casazza@usgs.gov","orcid":"https://orcid.org/0000-0002-5636-735X","contributorId":2091,"corporation":false,"usgs":true,"family":"Casazza","given":"Michael","email":"mike_casazza@usgs.gov","middleInitial":"L.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":895760,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Flint, Paul L. 0000-0002-8758-6993 pflint@usgs.gov","orcid":"https://orcid.org/0000-0002-8758-6993","contributorId":3284,"corporation":false,"usgs":true,"family":"Flint","given":"Paul","email":"pflint@usgs.gov","middleInitial":"L.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":895761,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70251662,"text":"sir20245005 - 2024 - Development and calibration of HEC–RAS hydraulic, temperature, and nutrient models for the Mohawk River, New York","interactions":[],"lastModifiedDate":"2026-02-02T22:10:38.784882","indexId":"sir20245005","displayToPublicDate":"2024-02-26T19:45:00","publicationYear":"2024","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2024-5005","displayTitle":"Development and Calibration of HEC–RAS Hydraulic, Temperature, and Nutrient Models for the Mohawk River, New York","title":"Development and calibration of HEC–RAS hydraulic, temperature, and nutrient models for the Mohawk River, New York","docAbstract":"<p>In support of a preliminary analysis performed by New York State Department of Environmental Conservation that found elevated nutrient levels along selected reaches of the Mohawk River, a one-dimensional, unsteady hydraulic and water-quality model (Hydrologic Engineering Center River Analysis System Nutrient Simulation Module 1 [HEC–RAS NSM I]) was developed by the U.S. Geological Survey for the 127-mile reach of the Mohawk River between Rome and Cohoes, New York. The model was designed to accurately simulate within-channel flow conditions for this highly regulated, control-structure dense river reach. The model was calibrated for the period of May through September 2016 using available streamflow, temperature, and water-quality data. Nitrogen, phosphorus, dissolved oxygen, and water column algae were balanced within the model; however, the nutrient model calibration was focused on phosphorus.</p><p>The HEC–RAS hydraulic model simulated streamflow adequately at the calibration locations with observed and simulated daily flows demonstrating coefficient of determination (<i>r</i><sup>2</sup>) values ranging from 0.91 to 0.97, mean absolute error ranging from 15–20 percent, and bias ranging from −7 to 16 percent. The water temperature model within HEC–RAS NSM I demonstrated remarkable ability to simulate water temperature: typical water temperature errors were less than 1.0 degree Celsius (°C). Simulated water temperature results closely tracked observed continuous water temperature data at three locations on the Mohawk River, with mean absolute error for the 2016 study period ranging from 0.87 to 0.90 °C, and a root mean square error of 1.00 to 1.07 °C.</p><p>Performance criteria for the water-quality (nutrient) model were applied differently than the water temperature model because of the temporally coarse discrete samples collected for the project. The average difference between final simulated concentrations and observed concentrations of organic phosphorus for all sample locations was within 0.01 milligrams per liter (mg/L) and within 0.09 mg/L for orthophosphate using all locations except Rome, which was within 0.25 mg/L.</p><p>The calibrated model was used to implement nine phosphorus reduction scenarios by applying reductions to wastewater treatment plant effluent concentrations within the model. Monthly mean differences were computed for five comparison locations. Scenario results were generally linear and predictable; scenarios implementing the highest reductions showed correspondingly larger differences in Mohawk River concentrations downstream from the wastewater treatment plants associated with those reductions. The largest monthly mean differences were realized from reduction scenario nine and ranged from −0.018 to −0.076 mg/L for organic phosphorus and from 0.001 to −0.138 mg/L for orthophosphate.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20245005","collaboration":"Prepared in cooperation with New York State Department of Environmental Conservation","usgsCitation":"Suro, T.P., Niemoczynski, M.J., and Boetsma, A., 2024, Development and calibration of HEC–RAS hydraulic, temperature, and nutrient models for the Mohawk River, New York: U.S. Geological Survey Scientific Investigations Report 2024–5005, 90 p., https://doi.org/10.3133/sir20245005","productDescription":"Report: xii, 90 p.; Data Release","numberOfPages":"90","onlineOnly":"Y","additionalOnlineFiles":"N","ipdsId":"IP-127136","costCenters":[{"id":470,"text":"New Jersey Water Science Center","active":true,"usgs":true}],"links":[{"id":425874,"rank":6,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9FRAYLT","text":"USGS data release","linkHelpText":"HEC–RAS hydraulic, temperature, and nutrient models for the Mohawk River between Rome and Cohoes, New York"},{"id":425872,"rank":4,"type":{"id":34,"text":"Image Folder"},"url":"https://pubs.usgs.gov/sir/2024/5005/images/"},{"id":425873,"rank":5,"type":{"id":31,"text":"Publication XML"},"url":"https://pubs.usgs.gov/sir/2024/5005/sir20245005.XML"},{"id":425869,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2024/5005/coverthb.jpg"},{"id":425870,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2024/5005/sir20245005.pdf","text":"Report","size":"20.5 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2024-5005"},{"id":425871,"rank":3,"type":{"id":39,"text":"HTML Document"},"url":"https://pubs.usgs.gov/publication/sir20245005/full","text":"Report","linkFileType":{"id":5,"text":"html"},"description":"SIR 2024-5005"},{"id":499420,"rank":7,"type":{"id":36,"text":"NGMDB Index Page"},"url":"https://ngmdb.usgs.gov/Prodesc/proddesc_116141.htm","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"New York","otherGeospatial":"Mohawk River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -75.4,\n              42.0\n            ],\n            [\n              -73.2,\n              42.0\n            ],\n            [\n              -73.2,\n              43.4\n            ],\n            [\n              -75.4,\n              43.4\n            ],\n            [\n              -75.4,\n              42.0\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/new-jersey-water-science-center\" data-mce-href=\"https://www.usgs.gov/centers/new-jersey-water-science-center\">New Jersey Water Science Center</a><br>U.S. Geological Survey<br>3450 Princeton Pike<br>Lawrenceville, NJ 08648</p><p><a href=\"https://pubs.usgs.gov/contact\" data-mce-href=\"../contact\">Contact Pubs Warehouse</a></p>","tableOfContents":"<ul><li>Acknowledgments</li><li>Abstract</li><li>Introduction</li><li>Purpose and Scope</li><li>Previous Studies</li><li>Study Area</li><li>Methods and Approach</li><li>Development of Hydraulic Model</li><li>Development of Water-Quality Model</li><li>Methods and Data used to Estimate Boundary Conditions for the Nutrient Simulation Model</li><li>Model Simulation of Nutrient Concentrations</li><li>Wastewater Treatment Plant Phosphorus Scenario Results</li><li>Summary</li><li>References Cited</li><li>Appendix 1</li></ul>","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"publishedDate":"2024-02-26","noUsgsAuthors":false,"publicationDate":"2024-02-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Suro, Thomas P. 0000-0002-9476-6829 tsuro@usgs.gov","orcid":"https://orcid.org/0000-0002-9476-6829","contributorId":2841,"corporation":false,"usgs":true,"family":"Suro","given":"Thomas","email":"tsuro@usgs.gov","middleInitial":"P.","affiliations":[{"id":470,"text":"New Jersey Water Science Center","active":true,"usgs":true},{"id":502,"text":"Office of Surface Water","active":true,"usgs":true}],"preferred":true,"id":895243,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Niemoczynski, Michal J. 0000-0003-0880-7354 mniemocz@usgs.gov","orcid":"https://orcid.org/0000-0003-0880-7354","contributorId":5840,"corporation":false,"usgs":true,"family":"Niemoczynski","given":"Michal","email":"mniemocz@usgs.gov","middleInitial":"J.","affiliations":[{"id":470,"text":"New Jersey Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895244,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Boetsma, Anna 0000-0002-4142-8199","orcid":"https://orcid.org/0000-0002-4142-8199","contributorId":223460,"corporation":false,"usgs":true,"family":"Boetsma","given":"Anna","email":"","affiliations":[{"id":470,"text":"New Jersey Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895245,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70257398,"text":"70257398 - 2024 - What waterfowl hunters want: Exploring heterogeneity in hunting trip preferences","interactions":[],"lastModifiedDate":"2024-08-28T23:08:47.122","indexId":"70257398","displayToPublicDate":"2024-02-26T16:00:50","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3750,"text":"Wetlands","onlineIssn":"1943-6246","printIssn":"0277-5212","active":true,"publicationSubtype":{"id":10}},"title":"What waterfowl hunters want: Exploring heterogeneity in hunting trip preferences","docAbstract":"<p><span>Canadian and American waterfowl hunters were surveyed to identify their hunting trip preferences. Respondents were individuals that were now participating&nbsp;or had participated in waterfowl hunting, and most had hunted the majority of the last five years. We identified four latent classes of waterfowl hunters that varied in their preferences for harvest, access effort, length of travel, quantity of waterfowl seen, and the potential for interference/competition. We found a diminishing return associated with the number of waterfowl harvested, and that ‘devoted’ and ‘local’ hunters did not perceive appreciable benefit from harvesting more birds beyond harvesting a single bird. Results highlight the importance of not only considering population size, but also the location of habitat for people and waterfowl. Our results provide waterfowl managers important insights into the heterogeneity of North American waterfowl hunters by highlighting differences in priorities for waterfowl hunting trips. Notably, to address this heterogeneity, managers could consider the balance of objectives, actions and resources designed to satisfy current waterfowl hunters. Managing access to improve the likelihood that hunters will see and have opportunities to harvest some waterfowl has benefit to hunters.</span></p>","language":"English","publisher":"Springer Nature","doi":"10.1007/s13157-023-01744-w","usgsCitation":"Sainsbury, K.A., Harshaw, H., Fulton, D.C., Cole, N.W., Dayer, A., Duberstein, J., Raedeke, A., Schuster, R., and Vrtiska, M., 2024, What waterfowl hunters want: Exploring heterogeneity in hunting trip preferences: Wetlands, v. 44, 35, 17 p., https://doi.org/10.1007/s13157-023-01744-w.","productDescription":"35, 17 p.","ipdsId":"IP-152539","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":440297,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s13157-023-01744-w","text":"Publisher Index 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Katherine A.","contributorId":342632,"corporation":false,"usgs":false,"family":"Sainsbury","given":"Katherine","email":"","middleInitial":"A.","affiliations":[{"id":36696,"text":"University of Alberta","active":true,"usgs":false}],"preferred":false,"id":910241,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Harshaw, Howard W.","contributorId":279390,"corporation":false,"usgs":false,"family":"Harshaw","given":"Howard W.","affiliations":[{"id":36696,"text":"University of Alberta","active":true,"usgs":false}],"preferred":false,"id":910242,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Fulton, David C. 0000-0001-5763-7887","orcid":"https://orcid.org/0000-0001-5763-7887","contributorId":333043,"corporation":false,"usgs":true,"family":"Fulton","given":"David","email":"","middleInitial":"C.","affiliations":[{"id":79716,"text":"Minnesota Cooperative Unit","active":true,"usgs":false}],"preferred":true,"id":910243,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Cole, Nicholas W. 0000-0003-1204-971X","orcid":"https://orcid.org/0000-0003-1204-971X","contributorId":278636,"corporation":false,"usgs":true,"family":"Cole","given":"Nicholas","email":"","middleInitial":"W.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":910244,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dayer, Ashley A.","contributorId":278637,"corporation":false,"usgs":false,"family":"Dayer","given":"Ashley A.","affiliations":[{"id":36967,"text":"Virginia Tech University","active":true,"usgs":false}],"preferred":false,"id":910245,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Duberstein, Jennie N.","contributorId":342635,"corporation":false,"usgs":false,"family":"Duberstein","given":"Jennie N.","affiliations":[{"id":40296,"text":"United States Fish and Wildlife Service","active":true,"usgs":false}],"preferred":false,"id":910246,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Raedeke, Andrew H.","contributorId":278640,"corporation":false,"usgs":false,"family":"Raedeke","given":"Andrew H.","affiliations":[{"id":16971,"text":"Missouri Department of Conservation","active":true,"usgs":false}],"preferred":false,"id":910247,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Schuster, Rudy 0000-0003-2353-8500 schusterr@usgs.gov","orcid":"https://orcid.org/0000-0003-2353-8500","contributorId":3119,"corporation":false,"usgs":true,"family":"Schuster","given":"Rudy","email":"schusterr@usgs.gov","affiliations":[],"preferred":true,"id":910248,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Vrtiska, Mark P.","contributorId":342638,"corporation":false,"usgs":false,"family":"Vrtiska","given":"Mark P.","affiliations":[{"id":81901,"text":"Nebraska-Lincoln, Lincoln","active":true,"usgs":false}],"preferred":false,"id":910249,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70251264,"text":"70251264 - 2024 - Sediment budget of a Maumee River headwater tributary: How streambank erosion, streambed-sediment storage, and streambed-sediment source inform our understanding of legacy phosphorus","interactions":[],"lastModifiedDate":"2024-03-26T14:59:48.116393","indexId":"70251264","displayToPublicDate":"2024-02-26T11:54:28","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2457,"text":"Journal of Soils and Sediments","active":true,"publicationSubtype":{"id":10}},"title":"Sediment budget of a Maumee River headwater tributary: How streambank erosion, streambed-sediment storage, and streambed-sediment source inform our understanding of legacy phosphorus","docAbstract":"<h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Objective</h3><p>We described source and phosphorus (P) retention potential of soft, fine-grained, streambed sediment and associated phosphorus (sed-P) during summer low-flow conditions. Combining in-channel, sed-P storage with relative age provided context on relevance to western Lake Erie Basin management goals.</p><h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Methods</h3><p>In 2019, rapid geomorphic assessment (30 reaches) compared streambed-sediment storage (S) to streambank erosion (E), providing annual sediment budgets (S:E). Streambed sediment (13 reaches) was fingerprinted and analyzed for sed-P. The P saturation ratio (PSR; four reaches) quantified potential sorption/desorption of dissolved P (DP) between the water column and streambed sediment. Analyses were supplemented with data from 2017 and 2021. The ratio of two fallout radionuclides, beryllium-7 (54-day half-life) and excess lead-210 (22.3&nbsp;years), apportioned “new” sediment based on time since rainfall contact.</p><h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Results</h3><p>Streambed sediment was mostly streambank (54–96%) for contributing areas &gt; 2.7 km<sup>2</sup>; for upstream reaches, a larger percentage was apportioned as upland (cropland, pasture, forest, and road), with &lt; 30% streambank. Streambank erosion correlated with contributing area; however, soil type (ecoregion), stream characteristics, and land use combined to drive streambed-sediment storage. Individual-reach S:E (accumulation of 0.01–35&nbsp;years of streambank erosion) differentiated erosional and depositional in-channel environments. Most reaches indicated that 17–57% of sediment had recent contact with rainfall. Streambed-sediment PSR indicated a low potential for further sorption of DP from the water column; one reach was a P source when sampled.</p><h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Conclusion</h3><p>Sed-P was higher in streambed sediment than in source samples, which varied by land use and ecoregion. This indicates homogenization resulting from in-stream sorption of DP during sediment transport that occurs over multiple events.</p>","language":"English","publisher":"Springer","doi":"10.1007/s11368-023-03713-6","usgsCitation":"Williamson, T.N., Fitzpatrick, F., Kreiling, R.M., Blount, J.D., and Karwan, D.L., 2024, Sediment budget of a Maumee River headwater tributary: How streambank erosion, streambed-sediment storage, and streambed-sediment source inform our understanding of legacy phosphorus: Journal of Soils and Sediments, v. 24, p. 1447-1463, https://doi.org/10.1007/s11368-023-03713-6.","productDescription":"17 p.","startPage":"1447","endPage":"1463","ipdsId":"IP-154572","costCenters":[{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true}],"links":[{"id":440300,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s11368-023-03713-6","text":"Publisher Index Page"},{"id":426142,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Indiana, Ohio","otherGeospatial":"Maumee River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -83.25514832288071,\n              41.67558956302901\n            ],\n            [\n              -85.14964718502311,\n              41.67558956302901\n            ],\n            [\n              -85.14964718502311,\n              40.43443489714787\n            ],\n            [\n              -83.25514832288071,\n              40.43443489714787\n            ],\n            [\n              -83.25514832288071,\n              41.67558956302901\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"24","noUsgsAuthors":false,"publicationDate":"2024-02-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Williamson, Tanja N. 0000-0002-7639-8495 tnwillia@usgs.gov","orcid":"https://orcid.org/0000-0002-7639-8495","contributorId":198329,"corporation":false,"usgs":true,"family":"Williamson","given":"Tanja","email":"tnwillia@usgs.gov","middleInitial":"N.","affiliations":[{"id":35860,"text":"Ohio-Kentucky-Indiana Water Science Center","active":true,"usgs":true}],"preferred":true,"id":893764,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fitzpatrick, Faith 0000-0002-9748-7075","orcid":"https://orcid.org/0000-0002-9748-7075","contributorId":209588,"corporation":false,"usgs":true,"family":"Fitzpatrick","given":"Faith","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":893765,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kreiling, Rebecca M. 0000-0002-9295-4156","orcid":"https://orcid.org/0000-0002-9295-4156","contributorId":202193,"corporation":false,"usgs":true,"family":"Kreiling","given":"Rebecca","middleInitial":"M.","affiliations":[{"id":606,"text":"Upper Midwest Environmental Sciences Center","active":true,"usgs":true}],"preferred":true,"id":893766,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Blount, James D. 0000-0002-0006-3947 jblount@usgs.gov","orcid":"https://orcid.org/0000-0002-0006-3947","contributorId":200231,"corporation":false,"usgs":true,"family":"Blount","given":"James","email":"jblount@usgs.gov","middleInitial":"D.","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":893767,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Karwan, Diana L.","contributorId":207315,"corporation":false,"usgs":false,"family":"Karwan","given":"Diana","email":"","middleInitial":"L.","affiliations":[{"id":6626,"text":"University of Minnesota","active":true,"usgs":false}],"preferred":false,"id":893768,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70255890,"text":"70255890 - 2024 - Immunomodulation in adult largemouth bass (Micropterus salmoides) exposed to a model estrogen or mixture of endocrine disrupting contaminants during early gonadal recrudescence","interactions":[],"lastModifiedDate":"2024-07-10T15:04:29.402516","indexId":"70255890","displayToPublicDate":"2024-02-26T10:00:05","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":17997,"text":"Comparative Immunology Reports","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Immunomodulation in adult largemouth bass (<i>Micropterus salmoides</i>) exposed to a model estrogen or mixture of endocrine disrupting contaminants during early gonadal recrudescence","title":"Immunomodulation in adult largemouth bass (Micropterus salmoides) exposed to a model estrogen or mixture of endocrine disrupting contaminants during early gonadal recrudescence","docAbstract":"<p><span>Disease outbreaks, skin lesions, fish kill events, and reproductive abnormalities have been observed in wild populations of Centrarchids in watersheds throughout the United States. Occurrence of synthetic and natural hormones from wastewater treatment plants and livestock operations, pesticides from agricultural land use, and phytoestrogens have been implicated as potential causes of these adverse effects. Our objective was to investigate possible immunomodulation in adult largemouth bass (</span><i>Micropterus salmoides</i><span>) in response to a seasonal exposure to environmentally relevant contaminants in outdoor experimental ponds. Exposures included 17α-ethinylestradiol (EE2; 3.6 ng/L) or a binary mixture of endocrine-active substances commonly detected in surface waters, estrone (E1; 85.6 ng/L) and atrazine (ATR; 5.4 µg/L). The 4-month exposure was conducted from July to November. Functional immune responses of anterior kidney-derived leukocytes were evaluated in December in the week following the end of the dosing period, and in the following April, four months after dosing ended and just prior to spawning. Concentrations of EE2 and E1 in the ponds fell below detectable levels in December, but detectable concentrations of ATR (2.9 µg/L) persisted at least through May. For each sampling time, anterior kidney leukocytes were isolated and grown in primary culture for the assessment of zymosan-stimulated respiratory burst and lectin-stimulated mitogenic responses. We observed seasonal differences in respiratory burst stimulation over time and treatment with a significantly greater response in April relative to December. Respiratory burst activity was also significantly greater in April for fish exposed to the E1+ATR relative to control. In April, prior to spawning, we observed a significantly dampened mitogenic response to PHAP (a T cell mitogen) and LPS (a B cell mitogen) in the EE2 treatment relative to control fish. There were no significant differences in mitogenic responses or respiratory burst between sexes. However, there was significantly higher alternative complement pathway hemolytic activity in males compared to females in both the control and E1+ATR treatment groups. Our results demonstrate that environmentally relevant concentrations of contaminants can alter immune function in a socioeconomically important fish species.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.cirep.2024.200140","usgsCitation":"Leet, J.K., Richter, C.A., Claunch, R., Gale, R., Tillitt, D.E., and Iwanowicz, L., 2024, Immunomodulation in adult largemouth bass (Micropterus salmoides) exposed to a model estrogen or mixture of endocrine disrupting contaminants during early gonadal recrudescence: Comparative Immunology Reports, v. 6, 200140, 7 p., https://doi.org/10.1016/j.cirep.2024.200140.","productDescription":"200140, 7 p.","ipdsId":"IP-157542","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":440303,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.cirep.2024.200140","text":"Publisher Index Page"},{"id":435034,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P91G7KMO","text":"USGS data release","linkHelpText":"Alternative complement pathway assay data for adult largemouth bass exposed in outdoor ponds to 17alpha-ethinylestradiol or an estrone-atrazine mixture"},{"id":430896,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"6","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Leet, Jessica Kristin 0000-0001-8142-6043","orcid":"https://orcid.org/0000-0001-8142-6043","contributorId":225505,"corporation":false,"usgs":true,"family":"Leet","given":"Jessica","email":"","middleInitial":"Kristin","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":905906,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Richter, Catherine A. 0000-0001-7322-4206 crichter@usgs.gov","orcid":"https://orcid.org/0000-0001-7322-4206","contributorId":138994,"corporation":false,"usgs":true,"family":"Richter","given":"Catherine","email":"crichter@usgs.gov","middleInitial":"A.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":905907,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Claunch, Rachel 0000-0003-1762-2175 rclaunch@usgs.gov","orcid":"https://orcid.org/0000-0003-1762-2175","contributorId":182424,"corporation":false,"usgs":true,"family":"Claunch","given":"Rachel","email":"rclaunch@usgs.gov","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":905908,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Gale, Robert 0000-0002-8533-141X","orcid":"https://orcid.org/0000-0002-8533-141X","contributorId":299958,"corporation":false,"usgs":false,"family":"Gale","given":"Robert","affiliations":[{"id":24583,"text":"former USGS employee","active":true,"usgs":false}],"preferred":false,"id":905909,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Tillitt, Donald E. 0000-0002-8278-3955 dtillitt@usgs.gov","orcid":"https://orcid.org/0000-0002-8278-3955","contributorId":1875,"corporation":false,"usgs":true,"family":"Tillitt","given":"Donald","email":"dtillitt@usgs.gov","middleInitial":"E.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":905910,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Iwanowicz, Luke R. 0000-0002-1197-6178","orcid":"https://orcid.org/0000-0002-1197-6178","contributorId":79382,"corporation":false,"usgs":true,"family":"Iwanowicz","given":"Luke R.","affiliations":[{"id":365,"text":"Leetown Science Center","active":true,"usgs":true}],"preferred":true,"id":905911,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70251904,"text":"70251904 - 2024 - Metabarcoding is (usually) more cost effective than seining or qPCR for detecting tidewater gobies and other estuarine fishes","interactions":[],"lastModifiedDate":"2024-03-06T12:50:28.823747","indexId":"70251904","displayToPublicDate":"2024-02-26T06:48:47","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3840,"text":"PeerJ","active":true,"publicationSubtype":{"id":10}},"title":"Metabarcoding is (usually) more cost effective than seining or qPCR for detecting tidewater gobies and other estuarine fishes","docAbstract":"<div class=\"abstract\"><p>Many studies have shown that environmental DNA (eDNA) sampling can be more sensitive than traditional sampling. For instance, past studies found a specific qPCR probe of a water sample is better than a seine for detecting the endangered northern tidewater goby,<span>&nbsp;</span><i>Eucyclogobius newberryi</i>. Furthermore, a metabarcoding sample often detects more fish species than a seine detects. Less consideration has been given to sampling costs. To help managers choose the best sampling method for their budget, I estimated detectability and costs per sample to compare the cost effectiveness of seining, qPCR and metabarcoding for detecting endangered tidewater gobies as well as the associated estuarine fish community in California. Five samples were enough for eDNA methods to confidently detect tidewater gobies, whereas seining took twice as many samples. Fixed program costs can be high for qPCR and seining, whereas metabarcoding had high per-sample costs, which led to changes in relative cost-effectiveness with the number of locations sampled. Under some circumstances (multiple locations visited or an already validated assay), qPCR was a bit more cost effective than metabarcoding for detecting tidewater gobies. Under all assumptions, seining was the least cost-effective method for detecting tidewater gobies or other fishes. Metabarcoding was the most cost-effective sampling method for multiple species detection. Despite its advantages, metabarcoding has gaps in sequence databases, can yield vague results for some species, and can lead novices to serious errors. Seining remains the only way to rapidly assess densities, size distributions, and fine-scale spatial distributions.</p></div>","language":"English","publisher":"PeerJ","doi":"10.7717/peerj.16847","usgsCitation":"Lafferty, K.D., 2024, Metabarcoding is (usually) more cost effective than seining or qPCR for detecting tidewater gobies and other estuarine fishes: PeerJ, v. 12, e16847, 24 p., https://doi.org/10.7717/peerj.16847.","productDescription":"e16847, 24 p.","ipdsId":"IP-122120","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":440312,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.7717/peerj.16847","text":"Publisher Index Page"},{"id":426360,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"12","noUsgsAuthors":false,"publicationDate":"2024-02-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Lafferty, Kevin D. 0000-0001-7583-4593 klafferty@usgs.gov","orcid":"https://orcid.org/0000-0001-7583-4593","contributorId":1415,"corporation":false,"usgs":true,"family":"Lafferty","given":"Kevin","email":"klafferty@usgs.gov","middleInitial":"D.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":896029,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70253575,"text":"70253575 - 2024 - Forest fire, thinning, and flood in wildland-urban interface: UAV and lidar-based estimate of natural disaster impacts","interactions":[],"lastModifiedDate":"2024-05-02T13:27:05.700199","indexId":"70253575","displayToPublicDate":"2024-02-24T08:19:19","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2602,"text":"Landscape Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Forest fire, thinning, and flood in wildland-urban interface: UAV and lidar-based estimate of natural disaster impacts","docAbstract":"<h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Context</h3><p>Wildland-urban interface (WUI) areas are facing increased forest fire risks and extreme precipitation events due to climate change, which can lead to post-fire flood events. The city of Flagstaff in northern Arizona, USA experienced WUI forest thinning, fire, and record rainfall events, which collectively contributed to large floods and damages to the urban neighborhoods and city infrastructure.</p><h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Objectives</h3><p>We demonstrate multi-temporal, high resolution image applications from an unoccupied aerial vehicle (UAV) and terrestrial lidar in estimating landscape disturbance impacts within the WUI. Changes in forest vegetation and bare ground cover in WUIs are particularly challenging to estimate with coarse-resolution satellite images due to fine-scale landscape processes and changes that often result in mixed pixels.</p><h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Methods</h3><p>Using Sentinel-2 satellite images, we document forest fire impacts and burn severity. Using 2016 and 2021 UAV multispectral images and Structure-from-Motion data, we estimate post-thinning changes in forest canopy cover, patch sizes, canopy height distribution, and bare ground cover. Using repeat lidar data within a smaller area of the watershed, we quantify geomorphic effects in the WUI associated with the fire and subsequent flooding.</p><h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Results</h3><p>We document that thinning significantly reduced forest canopy cover, patch size, tree density, and mean canopy height resulting in substantially reduced active crown fire risks in the future. However, the thinning equipment ignited a forest fire, which burned the WUI at varying severity at the top of the watershed that drains into the city. Moderate-high severity burns occurred within 3&nbsp;km of downtown Flagstaff threatening the WUI neighborhoods and the city. The upstream burned area then experienced 100-year and 200–500-year rainfall events, which resulted in large runoff-driven floods and sedimentation in the city.</p><h3 class=\"c-article__sub-heading\" data-test=\"abstract-sub-heading\">Conclusion</h3><p>We demonstrate that UAV high resolution images and photogrammetry combined with terrestrial lidar data provide detailed and accurate estimates of forest thinning and post-fire flood impacts, which could not be estimated from coarser-resolution satellite images. Communities around the world may need to prepare their WUIs for catastrophic fires and increase capacity to manage sediment-laden stormwater since both fires and extreme weather events are projected to increase.</p>","language":"English","publisher":"Springer","doi":"10.1007/s10980-024-01811-5","usgsCitation":"Sankey, T.T., Tango, L., Tatum, J., and Sankey, J., 2024, Forest fire, thinning, and flood in wildland-urban interface: UAV and lidar-based estimate of natural disaster impacts: Landscape Ecology, v. 39, 58, 16 p., https://doi.org/10.1007/s10980-024-01811-5.","productDescription":"58, 16 p.","ipdsId":"IP-139042","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":440320,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s10980-024-01811-5","text":"Publisher Index Page"},{"id":428319,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arizona","city":"Flagstaff","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -111.69345880006296,\n              35.25720796087404\n            ],\n            [\n              -111.69345880006296,\n              35.189455530499785\n            ],\n            [\n              -111.63079495096041,\n              35.189455530499785\n            ],\n            [\n              -111.63079495096041,\n              35.25720796087404\n            ],\n            [\n              -111.69345880006296,\n              35.25720796087404\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"39","noUsgsAuthors":false,"publicationDate":"2024-02-24","publicationStatus":"PW","contributors":{"authors":[{"text":"Sankey, Temuulen Ts.","contributorId":332965,"corporation":false,"usgs":false,"family":"Sankey","given":"Temuulen","email":"","middleInitial":"Ts.","affiliations":[{"id":79706,"text":"Northern Arizona University, School of Informatics, Computing and Cyber Systems, Flagstaff, AZ, USA","active":true,"usgs":false}],"preferred":false,"id":899931,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Tango, Lauren","contributorId":335948,"corporation":false,"usgs":false,"family":"Tango","given":"Lauren","affiliations":[{"id":40559,"text":"School of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ","active":true,"usgs":false}],"preferred":false,"id":899932,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Tatum, Julia","contributorId":335949,"corporation":false,"usgs":false,"family":"Tatum","given":"Julia","email":"","affiliations":[{"id":40559,"text":"School of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ","active":true,"usgs":false}],"preferred":false,"id":899933,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sankey, Joel B. 0000-0003-3150-4992","orcid":"https://orcid.org/0000-0003-3150-4992","contributorId":261248,"corporation":false,"usgs":true,"family":"Sankey","given":"Joel B.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":899934,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70251883,"text":"70251883 - 2024 - The geochemistry of continental hydrothermal systems","interactions":[],"lastModifiedDate":"2024-03-05T13:25:53.096551","indexId":"70251883","displayToPublicDate":"2024-02-24T07:21:19","publicationYear":"2024","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"The geochemistry of continental hydrothermal systems","docAbstract":"<div id=\"preview-section-abstract\"><div id=\"abstracts\" class=\"Abstracts u-font-serif text-s\"><div id=\"ab0010\" class=\"abstract author\" lang=\"en\"><div id=\"as0010\"><p id=\"sp0105\">Hydrothermal systems on the continents are of great significance because they are primary sources of economically important metals and geothermal energy, they are tourist attractions, they support bathing and health resorts, and they host extreme life forms. Research on hot springs and their deposits provide clues to early life on Earth and possibly on Mars and have led to major breakthroughs in biotechnology. Aqueous and gas-rich hydrothermal fluids also contribute to a range of volcanic hazards including the destabilization of volcanic edifices, acting as propellant in steam-driven hydrothermal explosions, reducing effective stresses in mudflows (lahars), emitting toxic and potentially lethal gases, and transporting toxic metals to watersheds. The main goals of this review are to summarize the state of knowledge on the chemistry of continental hydrothermal systems and highlight the myriad processes that operate under a wide range of temperatures, pressures, chemical compositions, and oxidation states.</p></div></div></div></div><div id=\"preview-section-introduction\"><br></div><div id=\"preview-section-snippets\"><br></div><div id=\"preview-section-references\"><br></div>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Reference Module in Earth Systems and Environmental Sciences","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"Elsevier","doi":"10.1016/B978-0-323-99762-1.00036-X","usgsCitation":"Hurwitz, S., Stefansson, A., Shock, E.L., and Kleine, B.I., 2024, The geochemistry of continental hydrothermal systems, chap. <i>of</i> Reference Module in Earth Systems and Environmental Sciences, https://doi.org/10.1016/B978-0-323-99762-1.00036-X.","ipdsId":"IP-153966","costCenters":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"links":[{"id":426317,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Hurwitz, Shaul 0000-0001-5142-6886 shaulh@usgs.gov","orcid":"https://orcid.org/0000-0001-5142-6886","contributorId":2169,"corporation":false,"usgs":true,"family":"Hurwitz","given":"Shaul","email":"shaulh@usgs.gov","affiliations":[{"id":438,"text":"National Research Program - Western Branch","active":true,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":895891,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Stefansson, Andri","contributorId":334536,"corporation":false,"usgs":false,"family":"Stefansson","given":"Andri","email":"","affiliations":[{"id":36649,"text":"University of Iceland","active":true,"usgs":false}],"preferred":false,"id":895892,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Shock, Everett L.","contributorId":334537,"corporation":false,"usgs":false,"family":"Shock","given":"Everett","email":"","middleInitial":"L.","affiliations":[{"id":6607,"text":"Arizona State University","active":true,"usgs":false}],"preferred":false,"id":895893,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kleine, Barbara I.","contributorId":334539,"corporation":false,"usgs":false,"family":"Kleine","given":"Barbara","email":"","middleInitial":"I.","affiliations":[{"id":36649,"text":"University of Iceland","active":true,"usgs":false}],"preferred":false,"id":895894,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70251888,"text":"70251888 - 2024 - Flow cytometric assessments of metabolic activity in bacterial assemblages provide insight into ecosystem condition along the Buffalo National River, Arkansas","interactions":[],"lastModifiedDate":"2024-03-05T13:18:01.228054","indexId":"70251888","displayToPublicDate":"2024-02-24T07:15:23","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Flow cytometric assessments of metabolic activity in bacterial assemblages provide insight into ecosystem condition along the Buffalo National River, Arkansas","docAbstract":"<div id=\"ab0005\" class=\"abstract author\" lang=\"en\"><div id=\"as0005\"><p id=\"sp0055\">The Buffalo National River (BNR), on karst terrain in Arkansas, is considered an extraordinary water resource. Water collected in Spring 2017 along BNR was metagenomically analyzed using 16S rDNA, and for 17&nbsp;months (5/2017–11/2018), bacterial responses were measured in relation to nutrients sampled along a stretch of BNR near a concentrated animal feed operation (CAFO) on Big Creek. Because cell count and esterase activity can increase proportionally with organic enrichment, they were hypothesized to be elevated near the CAFO. Counts (colony forming units; CFUs) were different among sites for 73&nbsp;% of the months; Big Creek generated highest CFUs 27&nbsp;% of the time, with the closest downstream site at 13.3&nbsp;%. Esterase activity was different among sites 94&nbsp;% of the time, with Big Creek exhibiting lowest activity 71&nbsp;% of the time. Over the months, activity was similar across sites at ~70&nbsp;% active, except at Big Creek (56&nbsp;%). The α-diversity of BNR microbial consortia near a wastewater treatment plant (WWTP) and the CAFO was related to distance from the WWTP and CAFO. The inverse relationship between high CFUs and low esterase activity at Big Creek (<i>r</i>&nbsp;=&nbsp;−0.71) actuated<span>&nbsp;</span><i>in vitro</i><span>&nbsp;</span>exposures of bacteria to organic wastewater contaminants (OWC) previously identified in the watershed. Exponential-phase<span>&nbsp;</span><i>Escherichia coli</i><span>&nbsp;</span>(stock strain),<span>&nbsp;</span><i>Streptococcus suis</i><span>&nbsp;</span>(avirulent, from swine), and<span>&nbsp;</span><i>S. dysgalactiae</i><span>&nbsp;</span>(virulent, from silver carp,<span>&nbsp;</span><i>Hypophthalmichthys molitrix</i>) were incubated with atrazine, pharmaceuticals (17 α-ethynylestradiol and trenbolone), and antimicrobials (tylosin and butylparaben). Bacteria were differentially responsive. Activity varied with exposure time and OWC type, but not concentration; atrazine decreased it most. Taken together - the metagenomic taxonomic similarities along BNR, slightly higher bacterial growth and lower bacterial esterase at the CAFO, and the lab exposures of bacterial strains showing that OWC altered metabolism - the results indicated that bioactive OWC entering the watershed can strongly influence microbial processes in the aquatic ecosystem.</p></div></div>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2024.170462","usgsCitation":"Jenkins, J., Dale, R., Hoffpauir, N.M., Baudoin, B.A., Matkin, C., Driver, L., Hodges, S.W., and Brown, B.L., 2024, Flow cytometric assessments of metabolic activity in bacterial assemblages provide insight into ecosystem condition along the Buffalo National River, Arkansas: Science of the Total Environment, v. 921, 170462, https://doi.org/10.1016/j.scitotenv.2024.170462.","productDescription":"170462","ipdsId":"IP-122142","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":486999,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.scitotenv.2024.170462","text":"Publisher Index Page"},{"id":435035,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9OVL2CJ","text":"USGS data release","linkHelpText":"Characteristics of Bacteria and Water Quality along the Buffalo National River 2017-2018"},{"id":426316,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"921","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Jenkins, Jill 0000-0002-5087-0894","orcid":"https://orcid.org/0000-0002-5087-0894","contributorId":206579,"corporation":false,"usgs":true,"family":"Jenkins","given":"Jill","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":895907,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dale, Rassa 0000-0001-8532-3287","orcid":"https://orcid.org/0000-0001-8532-3287","contributorId":222867,"corporation":false,"usgs":true,"family":"Dale","given":"Rassa","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":895908,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hoffpauir, Nina M. 0000-0001-9499-0831","orcid":"https://orcid.org/0000-0001-9499-0831","contributorId":334550,"corporation":false,"usgs":false,"family":"Hoffpauir","given":"Nina","email":"","middleInitial":"M.","affiliations":[{"id":80172,"text":"Formerly USGS Wetland and Aquatic Research Center, now Concentric Educational Solutions","active":true,"usgs":false}],"preferred":false,"id":895909,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Baudoin, Brooke A 0000-0003-2874-1604","orcid":"https://orcid.org/0000-0003-2874-1604","contributorId":267938,"corporation":false,"usgs":true,"family":"Baudoin","given":"Brooke","email":"","middleInitial":"A","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":895910,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Matkin, Caroline 0000-0002-7701-8255","orcid":"https://orcid.org/0000-0002-7701-8255","contributorId":334551,"corporation":false,"usgs":false,"family":"Matkin","given":"Caroline","email":"","affiliations":[{"id":80174,"text":"Formerly USGS Wetland and Aquatic Research Center, now University of Louisiana at Lafayette","active":true,"usgs":false}],"preferred":false,"id":895911,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Driver, Lucas 0000-0003-2549-1849","orcid":"https://orcid.org/0000-0003-2549-1849","contributorId":219176,"corporation":false,"usgs":true,"family":"Driver","given":"Lucas","email":"","affiliations":[{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true}],"preferred":true,"id":895912,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hodges, Shawn W 0000-0002-8950-7232","orcid":"https://orcid.org/0000-0002-8950-7232","contributorId":279667,"corporation":false,"usgs":false,"family":"Hodges","given":"Shawn","email":"","middleInitial":"W","affiliations":[{"id":36189,"text":"National Park Service","active":true,"usgs":false}],"preferred":false,"id":895913,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Brown, Bonnie L.","contributorId":23083,"corporation":false,"usgs":false,"family":"Brown","given":"Bonnie","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":895914,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70252580,"text":"70252580 - 2024 - Prioritizing water availability study settings to address geogenic contaminants and related societal factors","interactions":[],"lastModifiedDate":"2024-03-29T12:02:53.562013","indexId":"70252580","displayToPublicDate":"2024-02-24T06:59:35","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1552,"text":"Environmental Monitoring and Assessment","onlineIssn":"1573-2959","printIssn":"0167-6369","active":true,"publicationSubtype":{"id":10}},"title":"Prioritizing water availability study settings to address geogenic contaminants and related societal factors","docAbstract":"<div id=\"Abs1-section\" class=\"c-article-section\"><div id=\"Abs1-content\" class=\"c-article-section__content\"><p>Water availability for human and ecological uses depends on both water quantity and water quality. The U.S. Geological Survey (USGS) is developing strategies for prioritizing regional-scale and watershed basin-scale studies of water availability across the nation. Previous USGS ranking processes for basin-scale studies incorporated primarily water<span>&nbsp;</span><i>quantity</i><span>&nbsp;</span>factors but are now considering additional water<span>&nbsp;</span><i>quality</i><span>&nbsp;</span>factors. This study presents a ranking based on the potential impacts of geogenic constituents on water quality and consideration of societal factors related to water quality. High-concentration geogenic constituents, including trace elements and radionuclides, are among the most prevalent contaminants limiting water availability in the USA and globally. Geogenic constituents commonly occur in groundwater because of subsurface water–rock interactions, and their distributions are controlled by complex geochemical processes. Geogenic constituent mobility can also be affected by human activities (e.g., mining, energy production, irrigation, and pumping). Societal factors and relations to drinking water sources and water quality information are often overlooked when evaluating research priorities. Sociodemographic characteristics, data gaps resulting from historical data-collection disparities, and infrastructure condition/age are examples of factors to consider regarding environmental justice. This paper presents approaches for ranking and prioritizing potential basin-scale study areas across the contiguous USA by considering a suite of conventional physical and geochemical variables related to geogenic constituents, with and without considering variables related to societal factors. Simultaneous consideration of societal and conventional factors could provide decision makers with more diverse, interdisciplinary tools to increase equity and reduce bias in prioritizing focused research areas and future water availability studies.</p></div></div>","language":"English","publisher":"Springer Nature","doi":"10.1007/s10661-024-12362-2","usgsCitation":"Erickson, M., Brown, C., Tomaszewski, E.J., Ayotte, J.D., Qi, S.L., Kent, D.B., and Bohlke, J., 2024, Prioritizing water availability study settings to address geogenic contaminants and related societal factors: Environmental Monitoring and Assessment, v. 196, 303, 28 p., https://doi.org/10.1007/s10661-024-12362-2.","productDescription":"303, 28 p.","ipdsId":"IP-146908","costCenters":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"links":[{"id":440325,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index 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,{"id":70262418,"text":"70262418 - 2024 - Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.","interactions":[],"lastModifiedDate":"2025-01-23T17:25:02.725988","indexId":"70262418","displayToPublicDate":"2024-02-23T11:20:41","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":19915,"text":"Journal of Insect Behavior","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Monarch butterfly (<i>Danaus plexippus</i>) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.","title":"Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.","docAbstract":"<p><span>The monarch butterfly is a flagship species and pollinator whose populations have declined by 85% in the recent two decades. Their largest population overwinters in Mexico, then disperses across eastern North America during March to August. During September-December, they return south using two flyways, one that spans the central United States and another that follows the Atlantic coast. Migrating monarchs fly diurnally and roost in groups nocturnally. We sought to determine the criteria this species uses to select roost sites, and the landscape context where those sites are found. We developed species distribution models of the landscape context of Atlantic flyway roost sites via citizen scientist observations and environmental variables that affect monarchs in the adult stage prior to migration, using two algorithms (Maximum Entropy and Genetic Algorithm for Ruleset Prediction). We developed two model validation methods: a citizen scientist smartphone application and peer-informed comparisons with aerial imagery. Proximity to surface water, elevation, and vegetative cover were the most important criteria for monarch roost site selection. Our model predicted 2.6 million ha (2.9% of the study area) of suitable roosting habitat in the Atlantic flyway, with the greatest availability along the Atlantic coastal plain and Appalachian Mountain ridges. Conservation of this species is difficult, as monarchs range over both large areas and various habitat types, and most current monarch research and conservation efforts are focused on the breeding and overwintering periods. These models can serve to help prioritize surveys of roosting sites and conservation efforts during the monarchs’ fall migration.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s10905-023-09844-5","usgsCitation":"Boxler, B., Loftin, C., and Sutton, W.B., 2024, Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.: Journal of Insect Behavior, v. 37, p. 22-48, https://doi.org/10.1007/s10905-023-09844-5.","productDescription":"27 p.","startPage":"22","endPage":"48","ipdsId":"IP-122336","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":481012,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"37","noUsgsAuthors":false,"publicationDate":"2024-02-23","publicationStatus":"PW","contributors":{"authors":[{"text":"Boxler, Brandon M.","contributorId":349226,"corporation":false,"usgs":false,"family":"Boxler","given":"Brandon M.","affiliations":[{"id":7063,"text":"University of Maine","active":true,"usgs":false}],"preferred":false,"id":924154,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Loftin, Cyndy 0000-0001-9104-3724 cyndy_loftin@usgs.gov","orcid":"https://orcid.org/0000-0001-9104-3724","contributorId":146427,"corporation":false,"usgs":true,"family":"Loftin","given":"Cyndy","email":"cyndy_loftin@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":924153,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sutton, William B.","contributorId":88256,"corporation":false,"usgs":true,"family":"Sutton","given":"William","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":924155,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70263320,"text":"70263320 - 2024 - Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.","interactions":[],"lastModifiedDate":"2025-02-06T16:49:39.815475","indexId":"70263320","displayToPublicDate":"2024-02-23T10:46:37","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":19915,"text":"Journal of Insect Behavior","active":true,"publicationSubtype":{"id":10}},"title":"Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.","docAbstract":"<p><span>The monarch butterfly is a flagship species and pollinator whose populations have declined by 85% in the recent two decades. Their largest population overwinters in Mexico, then disperses across eastern North America during March to August. During September-December, they return south using two flyways, one that spans the central United States and another that follows the Atlantic coast. Migrating monarchs fly diurnally and roost in groups nocturnally. We sought to determine the criteria this species uses to select roost sites, and the landscape context where those sites are found. We developed species distribution models of the landscape context of Atlantic flyway roost sites via citizen scientist observations and environmental variables that affect monarchs in the adult stage prior to migration, using two algorithms (Maximum Entropy and Genetic Algorithm for Ruleset Prediction). We developed two model validation methods: a citizen scientist smartphone application and peer-informed comparisons with aerial imagery. Proximity to surface water, elevation, and vegetative cover were the most important criteria for monarch roost site selection. Our model predicted 2.6 million ha (2.9% of the study area) of suitable roosting habitat in the Atlantic flyway, with the greatest availability along the Atlantic coastal plain and Appalachian Mountain ridges. Conservation of this species is difficult, as monarchs range over both large areas and various habitat types, and most current monarch research and conservation efforts are focused on the breeding and overwintering periods. These models can serve to help prioritize surveys of roosting sites and conservation efforts during the monarchs’ fall migration.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s10905-023-09844-5","usgsCitation":"Boxler, B., Loftin, C., and Sutton, W.B., 2024, Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.: Journal of Insect Behavior, v. 37, p. 22-48, https://doi.org/10.1007/s10905-023-09844-5.","productDescription":"27 p.","startPage":"22","endPage":"48","ipdsId":"IP-123861","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":481758,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"37","noUsgsAuthors":false,"publicationDate":"2024-02-23","publicationStatus":"PW","contributors":{"authors":[{"text":"Boxler, Brandon M.","contributorId":349226,"corporation":false,"usgs":false,"family":"Boxler","given":"Brandon M.","affiliations":[{"id":7063,"text":"University of Maine","active":true,"usgs":false}],"preferred":false,"id":926324,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Loftin, Cyndy 0000-0001-9104-3724 cyndy_loftin@usgs.gov","orcid":"https://orcid.org/0000-0001-9104-3724","contributorId":146427,"corporation":false,"usgs":true,"family":"Loftin","given":"Cyndy","email":"cyndy_loftin@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":926323,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sutton, William B.","contributorId":88256,"corporation":false,"usgs":true,"family":"Sutton","given":"William","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":926325,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70251975,"text":"70251975 - 2024 - Urbanization and water management control stream water quality along a mountain to plains transition","interactions":[],"lastModifiedDate":"2024-03-08T12:37:51.951105","indexId":"70251975","displayToPublicDate":"2024-02-23T06:36:05","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3722,"text":"Water Resources Research","onlineIssn":"1944-7973","printIssn":"0043-1397","active":true,"publicationSubtype":{"id":10}},"title":"Urbanization and water management control stream water quality along a mountain to plains transition","docAbstract":"<div class=\"article-section__content en main\"><p>Urbanization can have substantial effects on water quality due to altered hydrology and introduction of constituents to water bodies. In arid and semi-arid environments, streams are further stressed by dewatering as a result of diversions. We conducted a high-resolution synoptic survey of two streams in Colorado, USA that transition abruptly from granitic/metamorphic forested mountains to sedimentary urbanized plains and are both highly managed for water supply, yet differ in degree of urbanization. A synoptic mass balance approach developed for mine drainage applications was adapted to elucidate effects of urbanization, geology, and diversions on stream chemistry during baseflow conditions. Urbanization was a more important driver of stream concentrations than geology. The urban area was a strong source of bromide, calcium, chloride, and manganese, while lanthanum and dissolved organic carbon were primarily sourced from the mountains. A majority of streamflow was removed by diversions near the mountains/plains interface. Groundwater accounted for 31% of the subsequent flow increase to the urbanized stream, and delivered at least 33% of chloride loading. Constituents that were primarily urban-derived (bromide, calcium, chloride, and manganese) were 2–3 times higher in the urban region due to diversions; without diversions, stream water quality would have largely retained characteristics of forested streams through the urban reach. This study provides insights into processes that affect water quality in highly managed streams of the semi-arid western USA.</p></div>","language":"English","publisher":"American Geophysical Union","doi":"10.1029/2023WR035633","usgsCitation":"Murphy, S.F., Runkel, R.L., Stets, E.G., Nolan, A.J., and Repert, D.A., 2024, Urbanization and water management control stream water quality along a mountain to plains transition: Water Resources Research, v. 60, no. 2, e2023WR035633, 19 p., https://doi.org/10.1029/2023WR035633.","productDescription":"e2023WR035633, 19 p.","ipdsId":"IP-154588","costCenters":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"links":[{"id":440332,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1029/2023wr035633","text":"Publisher Index Page"},{"id":426443,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Colorado","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -105.98846180455375,\n              40.30953068724273\n            ],\n            [\n              -105.98846180455375,\n              39.69518987255111\n            ],\n            [\n              -105.08758289830374,\n              39.69518987255111\n            ],\n            [\n              -105.08758289830374,\n              40.30953068724273\n            ],\n            [\n              -105.98846180455375,\n              40.30953068724273\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"60","issue":"2","noUsgsAuthors":false,"publicationDate":"2024-02-23","publicationStatus":"PW","contributors":{"authors":[{"text":"Murphy, Sheila F. 0000-0002-5481-3635 sfmurphy@usgs.gov","orcid":"https://orcid.org/0000-0002-5481-3635","contributorId":1854,"corporation":false,"usgs":true,"family":"Murphy","given":"Sheila","email":"sfmurphy@usgs.gov","middleInitial":"F.","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":896206,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Runkel, Robert L. 0000-0003-3220-481X runkel@usgs.gov","orcid":"https://orcid.org/0000-0003-3220-481X","contributorId":685,"corporation":false,"usgs":true,"family":"Runkel","given":"Robert","email":"runkel@usgs.gov","middleInitial":"L.","affiliations":[{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":896207,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Stets, Edward G. 0000-0001-5375-0196 estets@usgs.gov","orcid":"https://orcid.org/0000-0001-5375-0196","contributorId":194490,"corporation":false,"usgs":true,"family":"Stets","given":"Edward","email":"estets@usgs.gov","middleInitial":"G.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":896208,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Nolan, Alex J","contributorId":300263,"corporation":false,"usgs":false,"family":"Nolan","given":"Alex","email":"","middleInitial":"J","affiliations":[],"preferred":false,"id":896209,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Repert, Deborah A. 0000-0001-7284-1456 darepert@usgs.gov","orcid":"https://orcid.org/0000-0001-7284-1456","contributorId":2578,"corporation":false,"usgs":true,"family":"Repert","given":"Deborah","email":"darepert@usgs.gov","middleInitial":"A.","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true},{"id":36183,"text":"Hydro-Ecological Interactions Branch","active":true,"usgs":true},{"id":38175,"text":"Toxics Substances Hydrology Program","active":true,"usgs":true},{"id":37464,"text":"WMA - Laboratory & Analytical Services Division","active":true,"usgs":true}],"preferred":true,"id":896210,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70256504,"text":"70256504 - 2024 - Assessing grass carp (Ctenopharyngodon idella) occupancy and detection probability within Lake Erie from environmental DNA","interactions":[],"lastModifiedDate":"2024-09-09T17:01:27.882316","indexId":"70256504","displayToPublicDate":"2024-02-23T06:11:31","publicationYear":"2024","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2655,"text":"Management of Biological Invasions","active":true,"publicationSubtype":{"id":10}},"title":"Assessing grass carp (Ctenopharyngodon idella) occupancy and detection probability within Lake Erie from environmental DNA","docAbstract":"<p>Grass carp (<i>Ctenopharyngodon idella</i>), an invasive cyprinid within the Laurentian Great Lakes, is naturally reproducing in several Lake Erie tributaries, which has raised concerns of the species’ spread throughout Lake Erie and the other Great Lakes. Knowledge of the recent invasion extent outside of the western basin of Lake Erie, particularly in eastern tributaries and nearshore waters, is limited. Understanding the invasion extent would improve the efficacy of ongoing coordinated multi-agency control efforts. Molecular tools, such as environmental DNA (eDNA), have shown promise for early detection of aquatic invasive species. In this study, water samples (N = 476) were collected for grass carp eDNA monthly between May and November in 2018 and 2019, at three sites in the Michigan waters of Lake Erie and the Detroit River. We fit Bayesian multi-scale occupancy models to determine differences in eDNA capture and detection probability among grass carp qPCR assays, sampling sites, and across time. To determine whether grass carp were physically present, and to validate eDNA samples, we quantified recent grass carp presence in sampled areas using an existing acoustic telemetry and field sampling framework. Our results indicate that grass carp eDNA capture probability differed among sites, but there was no difference among months. Positive grass carp eDNA detections were observed across multiple months at each site, with 69% of site-specific sampling events testing positive for grass carp eDNA on at least one assay and replicate. The majority (65%) of weeks where positive eDNA sampling detections occurred also concurrently had one or more grass carp detected via acoustic telemetry 1–6 days prior. Our results highlight the potential utility of using eDNA to monitor the invasion extent of grass carp within the nearshore waters of Lake Erie. However, further evaluation of the factors that influence grass carp eDNA characteristics among sites within Lake Erie are needed to determine its efficacy for surveillance protocols by natural resource management agencies.</p>","language":"English","publisher":"Reabic","doi":"10.3391/mbi.2024.15.1.04","usgsCitation":"Bopp, J., Nathan, L.R., Robinson, J.D., Kanefsky, J., Scribner, K., Herbst, S., and Robinson, K.F., 2024, Assessing grass carp (Ctenopharyngodon idella) occupancy and detection probability within Lake Erie from environmental DNA: Management of Biological Invasions, v. 15, no. 1, p. 51-72, https://doi.org/10.3391/mbi.2024.15.1.04.","productDescription":"22 p.","startPage":"51","endPage":"72","ipdsId":"IP-153893","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":440334,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3391/mbi.2024.15.1.04","text":"Publisher Index Page"},{"id":433635,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":"Lake Erie","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"coordinates\": [\n          [\n            [\n              -83.49486489590893,\n              42.187220486618514\n            ],\n            [\n              -83.49486489590893,\n              41.38443575807409\n            ],\n            [\n              -82.35228677090853,\n              41.38443575807409\n            ],\n            [\n              -82.35228677090853,\n              42.187220486618514\n            ],\n            [\n              -83.49486489590893,\n              42.187220486618514\n            ]\n          ]\n        ],\n        \"type\": \"Polygon\"\n      }\n    }\n  ]\n}","volume":"15","issue":"1","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Bopp, Justin","contributorId":340933,"corporation":false,"usgs":false,"family":"Bopp","given":"Justin","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":907700,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Nathan, Lucas R.","contributorId":340934,"corporation":false,"usgs":false,"family":"Nathan","given":"Lucas","email":"","middleInitial":"R.","affiliations":[{"id":36986,"text":"Michigan Department of Natural Resources","active":true,"usgs":false}],"preferred":false,"id":907701,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Robinson, John D.","contributorId":340936,"corporation":false,"usgs":false,"family":"Robinson","given":"John","email":"","middleInitial":"D.","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":907702,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Kanefsky, Jeanette","contributorId":340938,"corporation":false,"usgs":false,"family":"Kanefsky","given":"Jeanette","email":"","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":907703,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Scribner, Kim T.","contributorId":340939,"corporation":false,"usgs":false,"family":"Scribner","given":"Kim T.","affiliations":[{"id":6601,"text":"Michigan State University","active":true,"usgs":false}],"preferred":false,"id":907704,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Herbst, Seth","contributorId":340940,"corporation":false,"usgs":false,"family":"Herbst","given":"Seth","affiliations":[{"id":36986,"text":"Michigan Department of Natural Resources","active":true,"usgs":false}],"preferred":false,"id":907705,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Robinson, Kelly Filer 0000-0001-8109-9492","orcid":"https://orcid.org/0000-0001-8109-9492","contributorId":340631,"corporation":false,"usgs":true,"family":"Robinson","given":"Kelly","email":"","middleInitial":"Filer","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":907706,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
]}