{"pageNumber":"742","pageRowStart":"18525","pageSize":"25","recordCount":184904,"records":[{"id":70203718,"text":"70203718 - 2019 - Biota dose assessment of small rodents sampled near breccia pipe uranium mines in the Grand Canyon watershed","interactions":[],"lastModifiedDate":"2019-06-07T16:35:05","indexId":"70203718","displayToPublicDate":"2019-06-06T10:16:34","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1884,"text":"Health Physics","active":true,"publicationSubtype":{"id":10}},"title":"Biota dose assessment of small rodents sampled near breccia pipe uranium mines in the Grand Canyon watershed","docAbstract":"The biotic exposure and uptake of radionuclides and potential health effects due to breccia pipe uranium mining in the Grand Canyon watershed are largely unknown. This paper describes the use of the RESRAD-BIOTA dose model to assess exposure of small rodents (n = 11) sampled at three uranium mine sites in different stages of ore production (active and postproduction). Rodent tissue and soil concentrations of naturally occurring uranium (234U, 235U, and 238U), thorium (228Th, 230Th, and 232Th), and radium (226Ra) radioisotopes were used in the dose model. The dose assessment results indicated that the potential internal, external, and total doses to rodents were below the US Department of Energy’s biota dose standard of 1 mGy d−1. As expected, tissue concentrations of 238U, 234U, and 230Th were in approximate equilibrium; however, 226Ra results in tissue were 1.25 to 5.75 times greater than 238U, 234U, and 230Th tissue results for 10 out of 11 samples. Soil at the three sites also displayed 226Ra enrichment, so it is likely that the 226Ra enrichment in the rodents was from soil via typical activities (i.e., burrowing, incidental ingestion, bathing, etc.) or by dietary uptake of translocated 226Ra. The results suggest that 226Ra is more mobile in this environment and bioaccumulates in these rodent species (e.g., in bones via the bloodstream). Internal dose accounting suggests that 226Ra is the radionuclide of most concern for rodent exposure and health.","language":"English","publisher":"Kluwer","doi":"10.1097/HP.0000000000001041","usgsCitation":"Minter, K.M., Jannik, T., Hinck, J.E., Cleveland, D.M., Kubilius, W.P., and Kuhne, W.W., 2019, Biota dose assessment of small rodents sampled near breccia pipe uranium mines in the Grand Canyon watershed: Health Physics, v. 117, no. 1, p. 20-27, https://doi.org/10.1097/HP.0000000000001041.","productDescription":"8 p.","startPage":"20","endPage":"27","ipdsId":"IP-099488","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":364427,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":"Grand Canyon ","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -114.0106201171875,\n              35.70414710206052\n            ],\n            [\n              -111.50848388671875,\n              35.70414710206052\n            ],\n            [\n              -111.50848388671875,\n              36.89499795802219\n            ],\n            [\n              -114.0106201171875,\n              36.89499795802219\n            ],\n            [\n              -114.0106201171875,\n              35.70414710206052\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"117","issue":"1","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"noUsgsAuthors":false,"publicationDate":"2019-03-19","publicationStatus":"PW","contributors":{"authors":[{"text":"Minter, Kelsey M.","contributorId":216055,"corporation":false,"usgs":false,"family":"Minter","given":"Kelsey","email":"","middleInitial":"M.","affiliations":[{"id":39358,"text":"Savannah River National Laboratory, Savannah River Site, Aiken, SC","active":true,"usgs":false}],"preferred":false,"id":763784,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jannik, Timothy","contributorId":216056,"corporation":false,"usgs":false,"family":"Jannik","given":"Timothy","email":"","affiliations":[{"id":39358,"text":"Savannah River National Laboratory, Savannah River Site, Aiken, SC","active":true,"usgs":false}],"preferred":false,"id":763785,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hinck, Jo Ellen 0000-0002-4912-5766 jhinck@usgs.gov","orcid":"https://orcid.org/0000-0002-4912-5766","contributorId":2743,"corporation":false,"usgs":true,"family":"Hinck","given":"Jo","email":"jhinck@usgs.gov","middleInitial":"Ellen","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":763786,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Cleveland, Danielle M. 0000-0003-3880-4584 dcleveland@usgs.gov","orcid":"https://orcid.org/0000-0003-3880-4584","contributorId":187471,"corporation":false,"usgs":true,"family":"Cleveland","given":"Danielle","email":"dcleveland@usgs.gov","middleInitial":"M.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":763783,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kubilius, Walter P.","contributorId":216057,"corporation":false,"usgs":false,"family":"Kubilius","given":"Walter","email":"","middleInitial":"P.","affiliations":[{"id":39358,"text":"Savannah River National Laboratory, Savannah River Site, Aiken, SC","active":true,"usgs":false}],"preferred":false,"id":763787,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Kuhne, Wendy W.","contributorId":216058,"corporation":false,"usgs":false,"family":"Kuhne","given":"Wendy","email":"","middleInitial":"W.","affiliations":[{"id":39358,"text":"Savannah River National Laboratory, Savannah River Site, Aiken, SC","active":true,"usgs":false}],"preferred":false,"id":763788,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70215386,"text":"70215386 - 2019 - Incorporating citizen science data in spatially explicit integrated population models","interactions":[],"lastModifiedDate":"2020-10-18T14:13:58.668729","indexId":"70215386","displayToPublicDate":"2019-06-06T09:05:04","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1465,"text":"Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Incorporating citizen science data in spatially explicit integrated population models","docAbstract":"<div class=\"abstract-group\"><div class=\"article-section__content en main\"><p>Information about population abundance, distribution, and demographic rates is critical for understanding a species’ ecology and for effective conservation and management. To collect data over large spatial and temporal extents for such inferences, especially for species with low densities or wide distributions, citizen science can be an efficient approach. Integrated models have also emerged as an important methodology to estimate population parameters by combining multiple types of data, including citizen science data. We developed a spatially explicit integrated model that combines opportunistically collected presence–absence (PA) data, commonly collected in citizen science efforts, with systematically collected spatial capture–recapture (SCR) data, which are often limited to small spatial and temporal extents. We conducted single and multi‐season simulations with parameters informed by North American black bear (<i>Ursus americanus</i>) populations, to evaluate the influence of varying amounts of opportunistic PA data collected at larger spatial and temporal extents on the estimation of population‐level parameters. Integrating opportunistic PA data increased the precision and accuracy of posterior estimates of abundance, and survival and recruitment rates. In some cases, adding PA locations improved abundance estimates more than increasing PA detection probability. Posterior estimates were as precise and unbiased as when higher quality, but sparse, SCR data were available. We also applied the integrated model to SCR and citizen science PA data collected on black bears in New York, with results consistent with our simulations. Our findings indicate that citizen science in integrated models can be a cost‐efficient way to improve estimates of population parameters and increase the spatiotemporal extent of inference. Continued developments with integrated models and citizen science data will offer additional ways to improve our understanding of population structure and demographics.</p></div></div>","language":"English","publisher":"Wiley","doi":"10.1002/ecy.2777","usgsCitation":"Sun, C., Royle, A., and Fuller, A.K., 2019, Incorporating citizen science data in spatially explicit integrated population models: Ecology, v. 100, no. 9, e02777, 12 p., https://doi.org/10.1002/ecy.2777.","productDescription":"e02777, 12 p.","ipdsId":"IP-102236","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":379493,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"100","issue":"9","noUsgsAuthors":false,"publicationDate":"2019-07-18","publicationStatus":"PW","contributors":{"authors":[{"text":"Sun, Catherine C.","contributorId":243283,"corporation":false,"usgs":false,"family":"Sun","given":"Catherine C.","affiliations":[{"id":12722,"text":"Cornell University","active":true,"usgs":false}],"preferred":false,"id":801944,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Royle, J. Andrew 0000-0003-3135-2167 aroyle@usgs.gov","orcid":"https://orcid.org/0000-0003-3135-2167","contributorId":146229,"corporation":false,"usgs":true,"family":"Royle","given":"J. Andrew","email":"aroyle@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":801945,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Fuller, Angela K. 0000-0002-9247-7468 afuller@usgs.gov","orcid":"https://orcid.org/0000-0002-9247-7468","contributorId":3984,"corporation":false,"usgs":true,"family":"Fuller","given":"Angela","email":"afuller@usgs.gov","middleInitial":"K.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":801943,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70200969,"text":"fs20183069 - 2019 - Water Resources of West Carroll Parish, Louisiana","interactions":[],"lastModifiedDate":"2019-07-22T07:58:16","indexId":"fs20183069","displayToPublicDate":"2019-06-06T07:59:57","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2018-3069","displayTitle":"Water Resources of West Carroll Parish, Louisiana","title":"Water Resources of West Carroll Parish, Louisiana","docAbstract":"<p>Information concerning the availability, use, and quality of water in West Carroll Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. In 2014, 21.27 million gallons per day (Mgal/d) of water were withdrawn in West Carroll Parish, including 17.91 Mgal/d from groundwater sources and 3.37&nbsp;Mgal/d from surface-water sources. Withdrawals for agricultural use, composed of general irrigation, rice irrigation, and livestock, accounted for 93 percent (19.76 Mgal/d) of the total water withdrawn. Other use categories included public supply and rural domestic. Water-use data collected at 5-year intervals from 1960 to 2010 and again in 2014 indicated that water withdrawals peaked in 2000 at 31.7 Mgal/d. The large decreases in water use from 1985 to 1990 and again from 2005 to 2010 are primarily attributable to declines in groundwater withdrawals for rice irrigation from 10 Mgal/d in 1985 to 2.22&nbsp;Mgal/d in 1990 and from 10.52 Mgal/d in 2005 to 5.14 Mgal/d in 2010. Surface-water withdrawals for general irrigation declined from 2.44 Mgal/d in 1985 to 0.42 Mgal/d in 1990 and from 2.2 Mgal/d in 2005 to 1.1&nbsp;Mgal/d in 2010. Surface-water withdrawals for rice irrigation declined from 1.41 Mgal/d in 1985 to 0.66 Mgal/d in 1990 and from 2.06 Mgal/d in 2005 to 1.01 Mgal/d in 2010.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20183069","collaboration":"Prepared in cooperation with the Louisiana Department of Transportation and Development","usgsCitation":"White, V.E., 2019, Water resources of West Carroll Parish, Louisiana: U.S. Geological Survey Fact Sheet 2018–3069, 6 p., https://doi.org/10.3133/fs20183069.","productDescription":"Report: 6 p.; Data Release","numberOfPages":"6","onlineOnly":"N","ipdsId":"IP-081704","costCenters":[{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true}],"links":[{"id":362840,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F78051VM","text":"USGS data release","description":"USGS Data Release","linkHelpText":"Water withdrawals by source and category in Louisiana Parishes, 2014–2015"},{"id":362839,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2018/3069/fs20183069.pdf","text":"Report","size":"907 kB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2018–3069"},{"id":362838,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2018/3069/coverthb2.jpg"}],"country":"United States","state":"Louisiana ","county":"West Carroll County","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[-91.2605,33.005],[-91.2627,33.0009],[-91.2644,32.9918],[-91.2715,32.9896],[-91.2742,32.9859],[-91.2683,32.9773],[-91.2699,32.9732],[-91.2748,32.9755],[-91.2792,32.9759],[-91.2765,32.9609],[-91.2771,32.9545],[-91.2831,32.9504],[-91.2869,32.9505],[-91.2929,32.9491],[-91.3006,32.9482],[-91.3061,32.9414],[-91.3105,32.9359],[-91.3072,32.9318],[-91.3056,32.9305],[-91.3028,32.925],[-91.3138,32.9136],[-91.3149,32.9082],[-91.3155,32.9022],[-91.3138,32.8977],[-91.3106,32.8827],[-91.3133,32.8808],[-91.3161,32.8749],[-91.3155,32.8695],[-91.3205,32.8649],[-91.3232,32.8654],[-91.3254,32.8713],[-91.3303,32.8722],[-91.3347,32.8658],[-91.3396,32.8622],[-91.3418,32.8545],[-91.344,32.8454],[-91.3473,32.8395],[-91.3489,32.824],[-91.3413,32.8217],[-91.3419,32.8135],[-91.3435,32.8089],[-91.3424,32.8017],[-91.3425,32.7944],[-91.3425,32.7835],[-91.3447,32.7771],[-91.3474,32.763],[-91.3463,32.7602],[-91.3458,32.7561],[-91.3458,32.7502],[-91.3491,32.747],[-91.3534,32.7439],[-91.3584,32.7402],[-91.3616,32.7343],[-91.3677,32.7243],[-91.3726,32.7179],[-91.3753,32.7134],[-91.3753,32.7097],[-91.3764,32.7047],[-91.3775,32.6997],[-91.3748,32.6974],[-91.3737,32.692],[-91.3764,32.6888],[-91.383,32.6888],[-91.3873,32.6902],[-91.3922,32.6929],[-91.3977,32.6938],[-91.4004,32.6893],[-91.401,32.6815],[-91.4026,32.672],[-91.4021,32.6647],[-91.4015,32.6587],[-91.395,32.6565],[-91.395,32.6451],[-91.401,32.6423],[-91.4037,32.6369],[-91.3999,32.6337],[-91.4005,32.631],[-91.4016,32.6301],[-91.4054,32.6264],[-91.4048,32.6178],[-91.4021,32.615],[-91.3961,32.6146],[-91.3951,32.6118],[-91.4016,32.6059],[-91.4098,32.6032],[-91.4158,32.6036],[-91.419,32.6005],[-91.4277,32.5996],[-91.4326,32.5927],[-91.443,32.5868],[-91.4457,32.5818],[-91.4686,32.5823],[-91.5812,32.5822],[-91.5964,32.5822],[-91.597,32.6332],[-91.5976,32.6688],[-91.639,32.6696],[-91.633,32.6724],[-91.6298,32.6774],[-91.6249,32.6824],[-91.6249,32.686],[-91.6227,32.692],[-91.6271,32.6956],[-91.6287,32.6992],[-91.6326,32.7024],[-91.6347,32.7029],[-91.6375,32.7033],[-91.638,32.7061],[-91.6375,32.7124],[-91.6348,32.7161],[-91.6326,32.7197],[-91.6293,32.7211],[-91.6244,32.7216],[-91.619,32.7289],[-91.6173,32.7316],[-91.6157,32.733],[-91.613,32.7352],[-91.6141,32.7384],[-91.6119,32.7412],[-91.6081,32.7421],[-91.6043,32.7434],[-91.6015,32.7448],[-91.5988,32.7521],[-91.5956,32.758],[-91.5961,32.7644],[-91.5972,32.7685],[-91.5994,32.773],[-91.6038,32.7817],[-91.6054,32.7858],[-91.5994,32.7922],[-91.5912,32.7976],[-91.5907,32.8027],[-91.5929,32.8072],[-91.5885,32.8122],[-91.5847,32.8172],[-91.5804,32.8204],[-91.5765,32.8222],[-91.576,32.8245],[-91.5782,32.83],[-91.5782,32.8332],[-91.5776,32.835],[-91.5711,32.8496],[-91.5646,32.8564],[-91.5613,32.8591],[-91.5564,32.8646],[-91.5498,32.8664],[-91.5476,32.8705],[-91.546,32.8737],[-91.5422,32.8773],[-91.5367,32.8769],[-91.5312,32.8778],[-91.5269,32.8764],[-91.5192,32.876],[-91.511,32.881],[-91.5056,32.8842],[-91.5039,32.886],[-91.5029,32.8887],[-91.4996,32.8896],[-91.4952,32.8937],[-91.4974,32.8997],[-91.4974,32.9079],[-91.493,32.9097],[-91.4881,32.9124],[-91.4886,32.917],[-91.4865,32.9202],[-91.4837,32.9229],[-91.4799,32.9247],[-91.4766,32.9302],[-91.4799,32.9343],[-91.4777,32.9402],[-91.4739,32.9425],[-91.4733,32.947],[-91.4651,32.9506],[-91.4602,32.9634],[-91.4586,32.9661],[-91.4531,32.9679],[-91.4487,32.9707],[-91.4432,32.9739],[-91.4411,32.9775],[-91.4389,32.9811],[-91.44,32.9857],[-91.4394,32.9934],[-91.4383,32.9962],[-91.4378,33.0003],[-91.4378,33.0058],[-91.4361,33.0057],[-91.2605,33.005]]]},\"properties\":{\"name\":\"West Carroll\",\"state\":\"LA\"}}]}","contact":"<p><a data-mce-href=\"mailto:%20gs-w-lmg_center_director@usgs.gov\" href=\"mailto:%20gs-w-lmg_center_director@usgs.gov\">Director</a>, <a href=\"https://la.water.usgs.gov/\" data-mce-href=\"https://la.water.usgs.gov/\">Lower Mississippi-Gulf Water Science Center</a><br>U.S. Geological Survey<br>3535 S. Sherwood Forest Blvd., Suite 120<br>Baton Rouge, LA 70816</p>","tableOfContents":"<ul><li>Introduction</li><li>Groundwater Resources</li><li>Surface-Water Resources</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"publishedDate":"2019-06-06","noUsgsAuthors":false,"publicationDate":"2019-06-06","publicationStatus":"PW","contributors":{"authors":[{"text":"White, Vincent E. 0000-0002-1660-0102 vwhite@usgs.gov","orcid":"https://orcid.org/0000-0002-1660-0102","contributorId":5388,"corporation":false,"usgs":true,"family":"White","given":"Vincent","email":"vwhite@usgs.gov","middleInitial":"E.","affiliations":[{"id":369,"text":"Louisiana Water Science Center","active":true,"usgs":true},{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true}],"preferred":true,"id":751471,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70200968,"text":"fs20183068 - 2019 - Water resources of Morehouse Parish, Louisiana","interactions":[],"lastModifiedDate":"2019-06-18T09:12:15","indexId":"fs20183068","displayToPublicDate":"2019-06-06T07:56:20","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2018-3068","displayTitle":"Water Resources of Morehouse Parish, Louisiana","title":"Water resources of Morehouse Parish, Louisiana","docAbstract":"<p>Information concerning the availability, use, and quality of water in Morehouse Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. In 2014, 109.84 million gallons per day (Mgal/d) of water were withdrawn in Morehouse Parish: 78.05 Mgal/d from groundwater sources and 31.79 Mgal/d from surface-water sources. Withdrawals for agricultural use—including general irrigation, rice irrigation, and livestock—accounted for about 97 percent (106.29 Mgal/d) of the total water withdrawn. Other categories of use included public supply, rural domestic, and industrial. Water-use data collected at 5-year intervals from 1960 to 2010 and again in 2014 indicated that water withdrawals peaked in 1975 at 167.82 Mgal/d.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20183068","collaboration":"Prepared in cooperation with the Louisiana Department of Transportation and Development","usgsCitation":"White, V.E., 2019, Water resources of Morehouse Parish, Louisiana: U.S. Geological Survey Fact Sheet 2018–3068, 6 p., https://doi.org/10.3133/fs20183068. ","productDescription":"Report: 6 p.; Data Release","numberOfPages":"6","onlineOnly":"N","ipdsId":"IP-081705","costCenters":[{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true}],"links":[{"id":362723,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2018/3068/fs20183068.pdf","text":"Report","size":"0.98 MB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2018–3068"},{"id":362724,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F78051VM","text":"USGS data release","description":"USGS Data Release","linkHelpText":"Water withdrawals by source and category in Louisiana Parishes, 2014–2015"},{"id":362722,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2018/3068/coverthb2.jpg"}],"country":"United States","state":"Louisiana","county":"Morehouse County","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[-91.4607,33.0059],[-91.4378,33.0058],[-91.4378,33.0003],[-91.4383,32.9962],[-91.4394,32.9934],[-91.44,32.9857],[-91.4389,32.9811],[-91.4411,32.9775],[-91.4432,32.9739],[-91.4487,32.9707],[-91.4531,32.9679],[-91.4586,32.9661],[-91.4602,32.9634],[-91.4651,32.9506],[-91.4733,32.947],[-91.4739,32.9425],[-91.4777,32.9402],[-91.4799,32.9343],[-91.4766,32.9302],[-91.4799,32.9247],[-91.4837,32.9229],[-91.4865,32.9202],[-91.4886,32.917],[-91.4881,32.9124],[-91.493,32.9097],[-91.4974,32.9079],[-91.4974,32.8997],[-91.4952,32.8937],[-91.4996,32.8896],[-91.5029,32.8887],[-91.5039,32.886],[-91.5056,32.8842],[-91.511,32.881],[-91.5192,32.876],[-91.5269,32.8764],[-91.5312,32.8778],[-91.5367,32.8769],[-91.5422,32.8773],[-91.546,32.8737],[-91.5476,32.8705],[-91.5498,32.8664],[-91.5564,32.8646],[-91.5613,32.8591],[-91.5646,32.8564],[-91.5711,32.8496],[-91.5776,32.835],[-91.5782,32.8332],[-91.5782,32.83],[-91.576,32.8245],[-91.5765,32.8222],[-91.5804,32.8204],[-91.5847,32.8172],[-91.5885,32.8122],[-91.5929,32.8072],[-91.5907,32.8027],[-91.5912,32.7976],[-91.5994,32.7922],[-91.6054,32.7858],[-91.6038,32.7817],[-91.5994,32.773],[-91.5972,32.7685],[-91.5961,32.7644],[-91.5956,32.758],[-91.5988,32.7521],[-91.6015,32.7448],[-91.6043,32.7434],[-91.6081,32.7421],[-91.6119,32.7412],[-91.6141,32.7384],[-91.613,32.7352],[-91.6157,32.733],[-91.6173,32.7316],[-91.619,32.7289],[-91.6244,32.7216],[-91.6293,32.7211],[-91.6326,32.7197],[-91.6348,32.7161],[-91.6375,32.7124],[-91.638,32.7061],[-91.6375,32.7033],[-91.6347,32.7029],[-91.6326,32.7024],[-91.6287,32.6992],[-91.6271,32.6956],[-91.6227,32.692],[-91.6249,32.686],[-91.6249,32.6824],[-91.6298,32.6774],[-91.633,32.6724],[-91.639,32.6696],[-91.6396,32.6619],[-91.6406,32.6578],[-91.6423,32.6514],[-91.6444,32.6455],[-91.6466,32.6409],[-91.6488,32.6382],[-91.6526,32.6359],[-91.6553,32.6327],[-91.6547,32.6295],[-91.6558,32.6231],[-91.658,32.6213],[-91.6613,32.6204],[-91.664,32.6186],[-91.6656,32.6177],[-91.6667,32.6158],[-91.6705,32.6149],[-91.6765,32.6154],[-91.6798,32.6167],[-91.6847,32.6163],[-91.6874,32.6149],[-91.6885,32.6122],[-91.6895,32.6094],[-91.6923,32.6103],[-91.6944,32.6108],[-91.6977,32.6112],[-91.707,32.6144],[-91.7135,32.6103],[-91.7195,32.6062],[-91.7244,32.6021],[-91.7282,32.5989],[-91.7298,32.5952],[-91.7336,32.5893],[-91.7384,32.5793],[-91.7357,32.5711],[-91.7395,32.5602],[-91.7444,32.5583],[-91.7455,32.5579],[-91.7542,32.5597],[-91.759,32.5601],[-91.7677,32.5555],[-91.7705,32.5601],[-91.7721,32.5619],[-91.7786,32.5637],[-91.7835,32.5628],[-91.7884,32.5619],[-91.7923,32.5637],[-91.795,32.565],[-91.7961,32.5682],[-91.8015,32.5705],[-91.8053,32.57],[-91.8086,32.5686],[-91.8119,32.5659],[-91.814,32.565],[-91.8146,32.5627],[-91.8194,32.5577],[-91.8249,32.5549],[-91.8298,32.5531],[-91.8368,32.5467],[-91.8389,32.5412],[-91.84,32.5399],[-91.8427,32.5389],[-91.8427,32.5362],[-91.8416,32.5298],[-91.84,32.5244],[-91.8421,32.5207],[-91.8454,32.5166],[-91.8486,32.5161],[-91.8546,32.5175],[-91.8606,32.5207],[-91.8633,32.5225],[-91.8677,32.5247],[-91.8726,32.5279],[-91.8764,32.5338],[-91.8852,32.5438],[-91.8906,32.542],[-91.8933,32.5415],[-91.895,32.5392],[-91.896,32.536],[-91.8966,32.5342],[-91.8976,32.5296],[-91.8981,32.526],[-91.8998,32.5214],[-91.9008,32.5164],[-91.9046,32.51],[-91.9122,32.5077],[-91.9079,32.5187],[-91.9079,32.5287],[-91.9096,32.536],[-91.9167,32.5414],[-91.9189,32.551],[-91.9206,32.5542],[-91.9239,32.5628],[-91.9256,32.5692],[-91.9294,32.5828],[-91.9219,32.5888],[-91.9208,32.5942],[-91.9209,32.6038],[-91.9203,32.6125],[-91.921,32.6234],[-91.9215,32.632],[-91.9232,32.6375],[-91.9243,32.6439],[-91.9227,32.6466],[-91.9151,32.6471],[-91.9129,32.6517],[-91.9108,32.6535],[-91.9086,32.6558],[-91.907,32.6608],[-91.9124,32.6626],[-91.919,32.6662],[-91.9239,32.6685],[-91.9277,32.6671],[-91.9331,32.6621],[-91.938,32.6598],[-91.9408,32.6602],[-91.9462,32.6638],[-91.949,32.6647],[-91.9512,32.6697],[-91.9523,32.6743],[-91.9577,32.6775],[-91.9616,32.6792],[-91.9638,32.6811],[-91.967,32.6847],[-91.9703,32.6902],[-91.9715,32.6992],[-91.9705,32.7111],[-91.9732,32.7129],[-91.977,32.7093],[-91.9808,32.7074],[-91.9906,32.7051],[-91.9933,32.7046],[-91.9971,32.7046],[-92.0059,32.7078],[-92.0081,32.7087],[-92.0151,32.7013],[-92.02,32.7004],[-92.0276,32.7036],[-92.0326,32.7113],[-92.0364,32.7135],[-92.0402,32.7126],[-92.0435,32.7099],[-92.0446,32.7062],[-92.0407,32.7017],[-92.0352,32.6931],[-92.0477,32.688],[-92.0499,32.6893],[-92.0521,32.6984],[-92.0555,32.7062],[-92.0517,32.7126],[-92.0539,32.7144],[-92.0561,32.7189],[-92.0577,32.7225],[-92.0632,32.7225],[-92.0654,32.723],[-92.0605,32.7303],[-92.0589,32.7348],[-92.054,32.7371],[-92.0519,32.7435],[-92.0568,32.7481],[-92.0623,32.7508],[-92.0629,32.7558],[-92.0624,32.7576],[-92.0613,32.7617],[-92.0602,32.7663],[-92.0554,32.7699],[-92.0548,32.7722],[-92.0533,32.7941],[-92.0545,32.7981],[-92.0572,32.805],[-92.0633,32.814],[-92.0661,32.8213],[-92.0601,32.8241],[-92.0601,32.8277],[-92.0651,32.8313],[-92.0645,32.8341],[-92.0558,32.8378],[-92.0564,32.8446],[-92.0663,32.85],[-92.0751,32.8604],[-92.084,32.8777],[-92.0786,32.8877],[-92.0776,32.8968],[-92.0798,32.9091],[-92.0739,32.916],[-92.0728,32.9251],[-92.0767,32.9342],[-92.0779,32.9465],[-92.0807,32.951],[-92.0791,32.9565],[-92.0851,32.9569],[-92.0835,32.9619],[-92.0857,32.9651],[-92.083,32.9692],[-92.0759,32.9697],[-92.0754,32.9738],[-92.082,32.9815],[-92.0771,32.9861],[-92.0711,32.9875],[-92.0717,32.997],[-92.0641,33.0021],[-92.0647,33.0089],[-92.0171,33.0087],[-91.9071,33.008],[-91.6834,33.0075],[-91.667,33.0074],[-91.6659,33.0074],[-91.4607,33.0059]]]},\"properties\":{\"name\":\"Morehouse\",\"state\":\"LA\"}}]}","contact":"<p><a data-mce-href=\"mailto:%20gs-w-lmg_center_director@usgs.gov\" href=\"mailto:%20gs-w-lmg_center_director@usgs.gov\">Director</a>, <a data-mce-href=\"https://la.water.usgs.gov/\" href=\"https://la.water.usgs.gov/\">Lower Mississippi-Gulf Water Science Center</a><br>U.S. Geological Survey<br>3535 S. Sherwood Forest Blvd., Suite 120<br>Baton Rouge, LA 70816<br></p>","tableOfContents":"<ul><li>Introduction</li><li>Groundwater Resources</li><li>Surface-Water Resources</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"publishedDate":"2019-06-06","noUsgsAuthors":false,"publicationDate":"2019-06-06","publicationStatus":"PW","contributors":{"authors":[{"text":"White, Vincent E. 0000-0002-1660-0102 vwhite@usgs.gov","orcid":"https://orcid.org/0000-0002-1660-0102","contributorId":5388,"corporation":false,"usgs":true,"family":"White","given":"Vincent","email":"vwhite@usgs.gov","middleInitial":"E.","affiliations":[{"id":369,"text":"Louisiana Water Science Center","active":true,"usgs":true},{"id":24708,"text":"Lower Mississippi-Gulf Water Science Center","active":true,"usgs":true}],"preferred":true,"id":751470,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70223805,"text":"70223805 - 2019 - Potential for improving among-reader precision and accuracy of Walleye age estimates with minimal training","interactions":[],"lastModifiedDate":"2021-09-08T12:35:23.76905","indexId":"70223805","displayToPublicDate":"2019-06-06T07:33:47","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2886,"text":"North American Journal of Fisheries Management","active":true,"publicationSubtype":{"id":10}},"title":"Potential for improving among-reader precision and accuracy of Walleye age estimates with minimal training","docAbstract":"<div class=\"abstract-group\"><div class=\"article-section__content en main\"><p>Within most resource management agencies, fish ages assigned by multiple readers are used to estimate age-based population metrics and to develop state or regional growth standards under the assumption that among-reader precision and accuracy are high. A cursory evaluation suggested that precision of age estimates among seven individuals who routinely estimate Walleye<span>&nbsp;</span><i>Sander vitreus</i><span>&nbsp;</span>age for the Wisconsin Department of Natural Resources was remarkably low (otolith mean coefficient of variation [CV]&nbsp;=&nbsp;37%; dorsal spine mean CV&nbsp;=&nbsp;35%), which prompted concern and interest in whether among-reader precision could be improved with a minimal level of training. Consequently, we compared among-reader precision and accuracy before and after a 1-d training exercise. We distributed images of sectioned otoliths and sectioned dorsal spines from a random sample of 50 Walleye, along with images of structures from 25 known-age Walleye, to 21 readers grouped into beginner, intermediate, and advanced experience levels based on responses to a pretraining survey. Among-reader precision was substantially higher after training (otolith mean CV&nbsp;=&nbsp;16%; dorsal spine mean CV&nbsp;=&nbsp;15%) than before (otolith mean CV&nbsp;=&nbsp;27%; dorsal spine mean CV&nbsp;=&nbsp;26%). Accuracy of age estimates also improved after training, but greater improvements were observed for otoliths (mean difference between estimated and known ages before training&nbsp;=&nbsp;0.80&nbsp;year; after training&nbsp;=&nbsp;0.15&nbsp;year) than for dorsal spines (mean difference between estimated and known ages before training&nbsp;=&nbsp;0.38&nbsp;year; after training&nbsp;=&nbsp;0.22&nbsp;year). Similar improvements in precision and accuracy were evident for all experience levels. Our results suggest that a simple, low-cost age estimation training can substantially increase precision and accuracy of age estimates among a large group of readers. However, additional training and quality control measures may be required to achieve higher levels of precision and accuracy.</p></div></div>","language":"English","publisher":"American Fisheries Society","doi":"10.1002/nafm.10293","usgsCitation":"Dembkowski, D., Isermann, D.A., and Koenigs, R., 2019, Potential for improving among-reader precision and accuracy of Walleye age estimates with minimal training: North American Journal of Fisheries Management, v. 39, no. 4, p. 625-636, https://doi.org/10.1002/nafm.10293.","productDescription":"12 p.","startPage":"625","endPage":"636","ipdsId":"IP-105542","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":388937,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"39","issue":"4","noUsgsAuthors":false,"publicationDate":"2019-06-06","publicationStatus":"PW","contributors":{"authors":[{"text":"Dembkowski, Daniel J.","contributorId":265436,"corporation":false,"usgs":false,"family":"Dembkowski","given":"Daniel J.","affiliations":[{"id":33303,"text":"University of Wisconsin Stevens Point","active":true,"usgs":false}],"preferred":false,"id":822730,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Isermann, Daniel A. 0000-0003-1151-9097 disermann@usgs.gov","orcid":"https://orcid.org/0000-0003-1151-9097","contributorId":5167,"corporation":false,"usgs":true,"family":"Isermann","given":"Daniel","email":"disermann@usgs.gov","middleInitial":"A.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":822729,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Koenigs, Ryan P.","contributorId":265437,"corporation":false,"usgs":false,"family":"Koenigs","given":"Ryan P.","affiliations":[{"id":16117,"text":"Wisconsin DNR","active":true,"usgs":false}],"preferred":false,"id":822731,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70203679,"text":"70203679 - 2019 - Nonlinearities in transmission dynamics and efficient management of vector-borne pathogens","interactions":[],"lastModifiedDate":"2019-06-05T15:35:50","indexId":"70203679","displayToPublicDate":"2019-06-05T15:34:53","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1450,"text":"Ecological Applications","active":true,"publicationSubtype":{"id":10}},"title":"Nonlinearities in transmission dynamics and efficient management of vector-borne pathogens","docAbstract":"Integrated Pest Management (IPM) is an approach to minimizing economic and environmental harm caused by pests, and Integrated Vector Management (IVM) uses similar methods to minimize pathogen transmission by vectors. The risk of acquiring a vector-borne infection is often quantified using the density of infected vectors.  The relationship between vector numbers and risk of human infection is more or less linear when both vector numbers and pathogen prevalence in vectors are low, but the relationship is nonlinear when vector density and/or infection prevalence are high.  Therefore, the density of infected vectors often does not accurately predict risk of human exposure to pathogens, and traditional estimates of % Control often overestimate the level of protection from infection resulting from management programs.  We suggest a modified estimator, % Protection, which more accurately quantifies protection against human infection resulting from a management intervention.  Cost-effectiveness of a management program is critical to protection of both public health and the environment, because the more efficiently available resources and funding are used, the fewer people get sick, and well-targeted efficient management programs minimize the need for poorly-targeted, expensive environmental interventions (e.g., broadscale pesticide applications) that tend to damage nontarget organisms and natural systems.  Design of an efficient, cost-effective IVM program requires knowledge of the cost-effectiveness functions (the effectiveness of control methods at lowering vector bites and/or infection prevalence with different levels of application) of the various control methods to be applied.  Alternative programs can be designed that optimize % Protection by integrating different control methods at different levels of investment, and environmental effects of these alternatives can be compared, allowing environmental considerations to be included explicitly in the decision process.  IPM, IVM, and Adaptive Management share the characteristic that management decisions must be made with incomplete knowledge of the functioning of natural systems or the efficacies of interventions.  IVM surveillance programs that assess the effects of individual control methods and of combinations of control methods on the numbers of vector bites and on infection prevalence in vectors, can increase knowledge of pathogen transmission dynamics and provide information to improve program effectiveness in subsequent applications.","language":"English","publisher":"ESA","doi":"10.1002/eap.1892","usgsCitation":"Ginsberg, H., and Couret, J., 2019, Nonlinearities in transmission dynamics and efficient management of vector-borne pathogens: Ecological Applications, v. 29, no. 4, p. 1-14, https://doi.org/10.1002/eap.1892.","productDescription":"e01892, 14 p.","startPage":"1","endPage":"14","ipdsId":"IP-097265","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":490059,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://digitalcommons.uri.edu/pls_facpubs/137","text":"External Repository"},{"id":364395,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":364297,"type":{"id":15,"text":"Index Page"},"url":"https://esajournals.onlinelibrary.wiley.com/doi/10.1002/eap.1892"}],"volume":"29","issue":"4","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2019-04-23","publicationStatus":"PW","contributors":{"authors":[{"text":"Ginsberg, Howard S. 0000-0002-4933-2466 hginsberg@usgs.gov","orcid":"https://orcid.org/0000-0002-4933-2466","contributorId":147665,"corporation":false,"usgs":true,"family":"Ginsberg","given":"Howard S.","email":"hginsberg@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":763577,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Couret, Jannelle","contributorId":215979,"corporation":false,"usgs":false,"family":"Couret","given":"Jannelle","email":"","affiliations":[{"id":6922,"text":"University of Rhode Island","active":true,"usgs":false}],"preferred":false,"id":763578,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70203692,"text":"70203692 - 2019 - Genetic tagging in the Anthropocene: Scaling ecology from alleles to ecosystems","interactions":[],"lastModifiedDate":"2019-06-05T14:33:43","indexId":"70203692","displayToPublicDate":"2019-06-05T14:33:17","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1450,"text":"Ecological Applications","active":true,"publicationSubtype":{"id":10}},"title":"Genetic tagging in the Anthropocene: Scaling ecology from alleles to ecosystems","docAbstract":"The Anthropocene is an era of marked human impact on the world. Quantifying these impacts 51 has become central to understanding the dynamics of coupled human-natural systems, resource52 dependent livelihoods, and biodiversity conservation. Ecologists are facing growing pressure to 53 quantify the size, distribution, and trajectory of wild populations in a cost-effective and socially54 acceptable manner. Genetic tagging, combined with modern computational and genetic analyses, 55 is an under-utilized tool to meet this demand, especially for wide-ranging, elusive, sensitive, and 56 low-density species. Genetic tagging studies are now revealing unprecedented insight into the 57 mechanisms that control the density, trajectory, connectivity and human-wildlife conflict for 58 populations over vast spatial scales. Here we outline the application of, and ecological inferences 59 from, new analytical techniques applied to genetically-tagged individuals, contrast this approach 60 with conventional methods, and describe how genetic tagging can be better applied to address 61 outstanding questions in ecology. We provide example analyses using a long-term genetic 62 tagging dataset of grizzly bears in the Canadian Rockies. The genetic tagging toolbox is a 63 powerful and overlooked ensemble that ecologists and conservation biologists can leverage to 64 generate evidence and meet the challenges of the Anthropocene.","language":"English","publisher":"ESA","doi":"10.1002/eap.1876","usgsCitation":"Lamb, C.T., Ford, A.T., Michael Proctor, Royle, A., and Mowat, G., 2019, Genetic tagging in the Anthropocene: Scaling ecology from alleles to ecosystems: Ecological Applications, v. 29, no. 4, p. 1-17, https://doi.org/10.1002/eap.1876.","productDescription":"e01876, 17 p.","startPage":"1","endPage":"17","ipdsId":"IP-104890","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":467557,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/eap.1876","text":"Publisher Index Page"},{"id":364381,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":364312,"type":{"id":15,"text":"Index Page"},"url":"https://esajournals.onlinelibrary.wiley.com/doi/10.1002/eap.1876"}],"volume":"29","issue":"4","publishingServiceCenter":{"id":10,"text":"Baltimore PSC"},"noUsgsAuthors":false,"publicationDate":"2019-03-26","publicationStatus":"PW","contributors":{"authors":[{"text":"Lamb, Clayton T.","contributorId":216009,"corporation":false,"usgs":false,"family":"Lamb","given":"Clayton","email":"","middleInitial":"T.","affiliations":[{"id":36696,"text":"University of Alberta","active":true,"usgs":false}],"preferred":false,"id":763639,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ford, Adam T","contributorId":216010,"corporation":false,"usgs":false,"family":"Ford","given":"Adam","email":"","middleInitial":"T","affiliations":[{"id":39350,"text":"Univ Alberta","active":true,"usgs":false}],"preferred":false,"id":763640,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Michael Proctor","contributorId":216011,"corporation":false,"usgs":false,"family":"Michael Proctor","affiliations":[{"id":39351,"text":"Birchdale Ecological Ltd","active":true,"usgs":false}],"preferred":false,"id":763641,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Royle, J. Andrew 0000-0003-3135-2167 aroyle@usgs.gov","orcid":"https://orcid.org/0000-0003-3135-2167","contributorId":146229,"corporation":false,"usgs":true,"family":"Royle","given":"J. Andrew","email":"aroyle@usgs.gov","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":763638,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Mowat, Garth","contributorId":216012,"corporation":false,"usgs":false,"family":"Mowat","given":"Garth","email":"","affiliations":[{"id":13452,"text":"Univ. British Columbia","active":true,"usgs":false}],"preferred":false,"id":763642,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70203703,"text":"70203703 - 2019 - Effect of amphibian chytrid fungus (Batrachochytrium dendrobatidis) on apparent survival of frogs and toads in the western USA","interactions":[],"lastModifiedDate":"2023-06-23T14:30:49.159198","indexId":"70203703","displayToPublicDate":"2019-06-05T14:20:00","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1015,"text":"Biological Conservation","active":true,"publicationSubtype":{"id":10}},"displayTitle":"Effect of amphibian chytrid fungus (<i>Batrachochytrium dendrobatidis</i>) on apparent survival of frogs and toads in the western USA","title":"Effect of amphibian chytrid fungus (Batrachochytrium dendrobatidis) on apparent survival of frogs and toads in the western USA","docAbstract":"<div id=\"abstracts\" class=\"Abstracts u-font-serif\"><div id=\"ab0005\" class=\"abstract author\" lang=\"en\"><div id=\"as0005\"><p id=\"sp0045\">Despite increasing interest in determining the population-level effects of emerging infectious diseases on wildlife, estimating effects of disease on survival rates remains difficult. Even for a well-studied disease such as amphibian chytridiomycosis (caused by the fungus<span>&nbsp;</span><i>Batrachochytrium dendrobatidis</i><span>&nbsp;</span>[Bd]), there are few estimates of how survival of wild hosts is affected. We applied hierarchical models to long-term capture-mark-recapture data (mean = 10.6 yrs, range = 6–15 yrs) from &gt;5500 uniquely-marked individuals to estimate the effect of Bd on apparent survival of four threatened or endangered ranid frog species (<i>Rana draytonii</i>,<span>&nbsp;</span><i>R. muscosa</i>,<span>&nbsp;</span><i>R. pretiosa</i>,<span>&nbsp;</span><i>R. sierrae</i>) at 14 study sites in California and Oregon (USA) and one bufonid toad (<i>Anaxyrus boreas</i>) at two study sites in Wyoming and Montana. Our models indicated that the presence of Bd on an individual reduced apparent survival of ranid frogs by ~6–15% depending on species and sex. The estimated difference between toads with and without Bd was 19% for the Montana population and 55% for the Wyoming population; however, the 95% Credible Interval of these estimates included zero. These results provide evidence for negative effects of Bd on survival in wild populations even in the absence of obvious die-offs. Determining what factors influence the magnitude of the effects of Bd on wildlife populations is an important next step toward identifying management actions. These estimates of Bd effects are important for understanding the extent and severity of disease, whether disease effects have changed over time, and for informing management actions.</p></div></div></div>","language":"English","publisher":"Elsevier","doi":"10.1016/j.biocon.2019.05.017","usgsCitation":"Russell, R.E., Halstead, B., Mosher, B., Muths, E.L., Adams, M.J., Campbell Grant, E.H., Fisher, R.N., Kleeman, P.M., Backlin, A.R., Pearl, C., Honeycutt, R.K., and Hossack, B.R., 2019, Effect of amphibian chytrid fungus (Batrachochytrium dendrobatidis) on apparent survival of frogs and toads in the western USA: Biological Conservation, v. 236, p. 296-304, https://doi.org/10.1016/j.biocon.2019.05.017.","productDescription":"9 p., Data release","startPage":"296","endPage":"304","ipdsId":"IP-102082","costCenters":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true},{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true},{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true},{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true},{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true},{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":467558,"rank":3,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.biocon.2019.05.017","text":"Publisher Index Page"},{"id":364377,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":418326,"rank":2,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P9LNLEDF","text":"USGS data release","description":"USGS data release","linkHelpText":"Amphibian capture mark-recapture"}],"country":"United States","state":"California, Montana, Oregon, Wyoming","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"MultiPolygon\",\"coordinates\":[[[[-122.421439,37.869969],[-122.41847,37.852721],[-122.446316,37.861046],[-122.421439,37.869969]]],[[[-122.3785,37.826505],[-122.369941,37.832137],[-122.362661,37.807577],[-122.3785,37.826505]]],[[[-120.248484,33.999329],[-120.043259,34.035806],[-120.046575,34.000002],[-120.011123,33.979894],[-119.978876,33.983081],[-119.97026,33.944359],[-120.121817,33.895712],[-120.168974,33.91909],[-120.224461,33.989059],[-120.248484,33.999329]]],[[[-119.789798,34.05726],[-119.755521,34.056716],[-119.712576,34.043265],[-119.686507,34.019805],[-119.637742,34.013178],[-119.612226,34.021256],[-119.59324,34.049625],[-119.5667,34.053452],[-119.52064,34.034262],[-119.560464,33.99553],[-119.662825,33.985889],[-119.721206,33.959583],[-119.758141,33.959212],[-119.873358,33.980375],[-119.884896,34.008814],[-119.876329,34.032087],[-119.923337,34.069361],[-119.912857,34.077508],[-119.818742,34.052997],[-119.789798,34.05726]]],[[[-120.46258,34.042627],[-120.440248,34.036918],[-120.418768,34.052093],[-120.390906,34.051994],[-120.370176,34.074907],[-120.358608,34.050235],[-120.331161,34.049097],[-120.302122,34.023574],[-120.454134,34.028081],[-120.46258,34.042627]]],[[[-118.524531,32.895488],[-118.586928,33.008281],[-118.606559,33.01469],[-118.605534,33.030999],[-118.569013,33.029151],[-118.496811,32.933847],[-118.353504,32.821962],[-118.394565,32.823978],[-118.425634,32.800595],[-118.496298,32.851572],[-118.524531,32.895488]]],[[[-118.500212,33.449592],[-118.370323,33.409285],[-118.365094,33.388374],[-118.310213,33.335795],[-118.305084,33.310323],[-118.325244,33.299075],[-118.374768,33.320065],[-118.465368,33.326056],[-118.48877,33.356649],[-118.478465,33.38632],[-118.48875,33.419826],[-118.570927,33.439351],[-118.60403,33.47654],[-118.54453,33.474119],[-118.500212,33.449592]]],[[[-119.543842,33.280329],[-119.465717,33.259239],[-119.429559,33.228167],[-119.476029,33.21552],[-119.545872,33.233406],[-119.578942,33.278628],[-119.562042,33.271129],[-119.543842,33.280329]]],[[[-119.999168,41.99454],[-120.001014,38.999574],[-118.714312,38.102185],[-117.244917,37.030244],[-115.852908,35.96966],[-114.633013,35.002085],[-114.635176,34.875003],[-114.586842,34.835672],[-114.552682,34.766871],[-114.46862,34.707573],[-114.438739,34.621455],[-114.424202,34.610453],[-114.422382,34.580711],[-114.380838,34.529724],[-114.387187,34.462021],[-114.373719,34.446938],[-114.335372,34.450038],[-114.229686,34.368908],[-114.176909,34.349306],[-114.138167,34.300936],[-114.134768,34.268965],[-114.223384,34.205136],[-114.229715,34.186928],[-114.287294,34.170529],[-114.320777,34.138635],[-114.411681,34.110031],[-114.43338,34.088413],[-114.438266,34.022609],[-114.535478,33.934651],[-114.508558,33.906098],[-114.518555,33.889847],[-114.503017,33.867998],[-114.529385,33.851755],[-114.527161,33.816191],[-114.504863,33.760465],[-114.512348,33.734214],[-114.494197,33.707922],[-114.531523,33.675108],[-114.525783,33.616588],[-114.5403,33.580615],[-114.524599,33.552231],[-114.588239,33.502453],[-114.643302,33.416745],[-114.725282,33.405048],[-114.698035,33.352442],[-114.729904,33.305745],[-114.723259,33.288079],[-114.672401,33.26047],[-114.688205,33.247966],[-114.673715,33.219245],[-114.678729,33.162948],[-114.707819,33.091102],[-114.68902,33.084036],[-114.66506,33.033908],[-114.641622,33.046896],[-114.618788,33.027202],[-114.523578,33.030961],[-114.502871,33.011153],[-114.494212,32.974262],[-114.469039,32.972295],[-114.48092,32.935252],[-114.464448,32.913129],[-114.468971,32.845155],[-114.528849,32.796307],[-114.526856,32.757094],[-114.615733,32.729427],[-114.69879,32.744846],[-114.717665,32.721654],[-117.124862,32.534156],[-117.136664,32.618754],[-117.168866,32.671952],[-117.213068,32.687751],[-117.246069,32.669352],[-117.25497,32.786948],[-117.28217,32.839547],[-117.25617,32.859447],[-117.25447,32.900146],[-117.28077,33.012343],[-117.315278,33.093504],[-117.469794,33.296417],[-117.547693,33.365491],[-117.59588,33.386629],[-117.645582,33.440728],[-117.684584,33.461927],[-117.715349,33.460556],[-117.784888,33.541525],[-117.87679,33.592322],[-117.927091,33.605521],[-118.132698,33.753217],[-118.1755,33.763617],[-118.187701,33.749218],[-118.181367,33.717367],[-118.258687,33.703741],[-118.411211,33.741985],[-118.428407,33.774715],[-118.394376,33.804289],[-118.392107,33.840915],[-118.460611,33.969111],[-118.519514,34.027509],[-118.569235,34.04164],[-118.744952,34.032103],[-118.783433,34.021543],[-118.805114,34.001239],[-118.854653,34.034215],[-118.938081,34.043383],[-119.088536,34.09831],[-119.130169,34.100102],[-119.227743,34.161728],[-119.278644,34.266902],[-119.313034,34.275689],[-119.370356,34.319486],[-119.388249,34.317398],[-119.461036,34.374064],[-119.536957,34.395495],[-119.559459,34.413395],[-119.671866,34.416096],[-119.709067,34.395397],[-119.794771,34.417597],[-119.873971,34.408795],[-120.008077,34.460447],[-120.141165,34.473405],[-120.295051,34.470623],[-120.471376,34.447846],[-120.47661,34.475131],[-120.511421,34.522953],[-120.581293,34.556959],[-120.622575,34.554017],[-120.645739,34.581035],[-120.60197,34.692095],[-120.637415,34.755895],[-120.610266,34.85818],[-120.647328,34.901133],[-120.670835,34.904115],[-120.629931,35.061515],[-120.644311,35.139616],[-120.704203,35.173206],[-120.74887,35.177795],[-120.756086,35.160459],[-120.856047,35.206487],[-120.89679,35.247877],[-120.862684,35.346776],[-120.866099,35.393045],[-120.884757,35.430196],[-120.907937,35.449069],[-121.003359,35.46071],[-121.101595,35.548814],[-121.166712,35.635399],[-121.284973,35.674109],[-121.314632,35.71331],[-121.315786,35.75252],[-121.332449,35.783106],[-121.462264,35.885618],[-121.503112,36.000299],[-121.574602,36.025156],[-121.629634,36.114452],[-121.680145,36.165818],[-121.717176,36.195146],[-121.826425,36.24186],[-121.888491,36.30281],[-121.903195,36.393603],[-121.9416,36.485602],[-121.944666,36.521861],[-121.928769,36.523147],[-121.932508,36.559935],[-121.978592,36.580488],[-121.938551,36.633908],[-121.923866,36.634559],[-121.889064,36.601759],[-121.842263,36.630059],[-121.814462,36.682858],[-121.791544,36.815186],[-121.862266,36.931552],[-121.906468,36.96895],[-121.93947,36.97805],[-121.972771,36.954151],[-122.012373,36.96455],[-122.050122,36.948523],[-122.105976,36.955951],[-122.20618,37.013949],[-122.284882,37.101747],[-122.337071,37.117382],[-122.367085,37.172817],[-122.405073,37.195791],[-122.419113,37.24147],[-122.40085,37.359225],[-122.443687,37.435941],[-122.452087,37.48054],[-122.467888,37.49814],[-122.499289,37.495341],[-122.516689,37.52134],[-122.517187,37.590637],[-122.501386,37.599637],[-122.494085,37.644035],[-122.514483,37.780829],[-122.485783,37.790629],[-122.478083,37.810828],[-122.407452,37.811441],[-122.385323,37.790724],[-122.375854,37.734979],[-122.356784,37.729505],[-122.361749,37.71501],[-122.391374,37.708331],[-122.374291,37.662206],[-122.386072,37.637662],[-122.35531,37.615736],[-122.378545,37.605592],[-122.360219,37.592501],[-122.317676,37.590865],[-122.305895,37.575484],[-122.262698,37.572866],[-122.196593,37.537196],[-122.194957,37.522469],[-122.168449,37.504143],[-122.116112,37.505386],[-122.111998,37.528851],[-122.147014,37.588411],[-122.163049,37.667933],[-122.246826,37.72193],[-122.253753,37.761218],[-122.329159,37.783173],[-122.333711,37.809797],[-122.306222,37.827469],[-122.301313,37.847758],[-122.309986,37.892755],[-122.33453,37.908791],[-122.385908,37.908136],[-122.430087,37.963115],[-122.399832,37.956009],[-122.367582,37.978168],[-122.363655,38.014166],[-122.340093,38.003694],[-122.283478,38.022674],[-122.262861,38.0446],[-122.273006,38.07438],[-122.314567,38.115287],[-122.39638,38.149976],[-122.439577,38.116923],[-122.489974,38.112014],[-122.483757,38.071762],[-122.497828,38.019402],[-122.448413,37.988313],[-122.488665,37.966714],[-122.480484,37.945443],[-122.503064,37.928753],[-122.43925,37.88392],[-122.45005,37.871157],[-122.480811,37.873448],[-122.479151,37.825428],[-122.505383,37.822128],[-122.548986,37.836227],[-122.656519,37.904519],[-122.70264,37.89382],[-122.727297,37.904626],[-122.736898,37.925825],[-122.783244,37.951334],[-122.821383,37.996735],[-122.882114,38.025273],[-122.956811,38.02872],[-122.981776,38.009119],[-122.976764,37.99568],[-123.024066,37.994878],[-122.99242,38.041758],[-122.949074,38.15406],[-122.991953,38.233185],[-122.968569,38.242879],[-122.977082,38.267902],[-123.024333,38.310573],[-123.063671,38.302178],[-123.074684,38.322574],[-123.068265,38.359865],[-123.128825,38.450418],[-123.331899,38.565542],[-123.441774,38.699744],[-123.514784,38.741966],[-123.541837,38.776764],[-123.647387,38.845472],[-123.659846,38.872529],[-123.725367,38.917438],[-123.738886,38.95412],[-123.711149,38.977316],[-123.690095,39.031157],[-123.713392,39.108422],[-123.774998,39.212083],[-123.822085,39.343857],[-123.81469,39.446538],[-123.766475,39.552803],[-123.787417,39.604552],[-123.792659,39.684122],[-123.829545,39.723071],[-123.851714,39.832041],[-123.907664,39.863028],[-123.930047,39.909697],[-123.954952,39.922373],[-124.035904,40.013319],[-124.079983,40.029773],[-124.080709,40.06611],[-124.110549,40.103765],[-124.187874,40.130542],[-124.214895,40.160902],[-124.363414,40.260974],[-124.347853,40.314634],[-124.373599,40.392923],[-124.409591,40.438076],[-124.382816,40.519],[-124.329404,40.61643],[-124.176715,40.843618],[-124.137066,40.925732],[-124.112165,41.028173],[-124.125448,41.048504],[-124.153622,41.05355],[-124.165414,41.129822],[-124.1438,41.144686],[-124.106986,41.229678],[-124.063076,41.439579],[-124.081987,41.547761],[-124.135552,41.657307],[-124.147412,41.717955],[-124.164716,41.740126],[-124.19104,41.736079],[-124.255994,41.783014],[-124.230678,41.818681],[-124.208439,41.888192],[-124.204948,41.983441],[-124.214213,42.005939],[-124.270464,42.045553],[-124.299649,42.051736],[-124.34101,42.092929],[-124.356229,42.114952],[-124.361009,42.180752],[-124.377762,42.218809],[-124.410982,42.250547],[-124.405148,42.278107],[-124.429288,42.331746],[-124.434882,42.434916],[-124.390664,42.566593],[-124.401177,42.627192],[-124.413119,42.657934],[-124.45074,42.675798],[-124.473864,42.732671],[-124.510017,42.734746],[-124.552441,42.840568],[-124.456918,43.000315],[-124.434451,43.115986],[-124.401726,43.184896],[-124.38246,43.270167],[-124.400404,43.302121],[-124.315012,43.388389],[-124.233534,43.55713],[-124.150267,43.91085],[-124.122406,44.104442],[-124.1152,44.286486],[-124.084401,44.415611],[-124.067569,44.428582],[-124.079301,44.430863],[-124.084429,44.486927],[-124.067251,44.60804],[-124.082326,44.608861],[-124.065202,44.622445],[-124.058281,44.658866],[-124.070394,44.683514],[-124.059077,44.737656],[-124.074066,44.798107],[-124.025136,44.928175],[-124.004598,45.044959],[-124.017991,45.049808],[-124.015851,45.064759],[-123.989529,45.094045],[-123.975425,45.145476],[-123.964169,45.317026],[-123.972899,45.33689],[-124.007756,45.336813],[-123.973398,45.354791],[-123.965728,45.386242],[-123.960557,45.430778],[-123.976544,45.489733],[-123.957568,45.510399],[-123.939005,45.661923],[-123.943121,45.727031],[-123.982578,45.761815],[-123.969459,45.782371],[-123.962736,45.869974],[-123.96763,45.907807],[-123.993703,45.946431],[-123.969991,45.969139],[-123.941831,45.97566],[-123.927891,46.009564],[-123.947531,46.116131],[-123.996766,46.20399],[-124.024305,46.229256],[-124.001998,46.237316],[-123.987196,46.211521],[-123.854801,46.157342],[-123.841521,46.169824],[-123.866643,46.187674],[-123.636474,46.214359],[-123.613459,46.239228],[-123.586205,46.228654],[-123.548194,46.248245],[-123.547659,46.259109],[-123.501245,46.271004],[-123.447592,46.249832],[-123.427629,46.229348],[-123.430847,46.181827],[-123.371433,46.146372],[-123.280166,46.144843],[-123.166414,46.188973],[-123.115904,46.185268],[-122.904119,46.083734],[-122.878092,46.031281],[-122.813998,45.960984],[-122.81151,45.912725],[-122.785026,45.867699],[-122.795605,45.81],[-122.761451,45.759163],[-122.774511,45.680437],[-122.76381,45.657138],[-122.643907,45.609739],[-122.548149,45.596768],[-122.438674,45.563585],[-122.380302,45.575941],[-122.331502,45.548241],[-122.294901,45.543541],[-122.248993,45.547745],[-122.183695,45.577696],[-122.101675,45.583516],[-121.983038,45.622812],[-121.955734,45.643559],[-121.908267,45.654399],[-121.867167,45.693277],[-121.811304,45.706761],[-121.707358,45.694809],[-121.533106,45.726541],[-121.423592,45.69399],[-121.33777,45.704949],[-121.215779,45.671238],[-121.196556,45.616689],[-121.167852,45.606098],[-121.131953,45.609762],[-121.06437,45.652549],[-120.943977,45.656445],[-120.895575,45.642945],[-120.855674,45.671545],[-120.68937,45.715847],[-120.634968,45.745847],[-120.559465,45.738348],[-120.482362,45.694449],[-120.40396,45.699249],[-120.210754,45.725951],[-120.170453,45.761951],[-119.965744,45.824365],[-119.669877,45.856867],[-119.600549,45.919581],[-119.571584,45.925456],[-119.487829,45.906307],[-119.25715,45.939926],[-119.19553,45.92787],[-119.12612,45.932859],[-119.027056,45.969134],[-118.987129,45.999855],[-116.915989,45.995413],[-116.892935,45.974396],[-116.859795,45.907264],[-116.796051,45.858473],[-116.782676,45.825376],[-116.7634,45.81658],[-116.70845,45.825117],[-116.665344,45.781998],[-116.593004,45.778541],[-116.546643,45.750972],[-116.528272,45.681473],[-116.487894,45.649769],[-116.463635,45.602785],[-116.523638,45.54661],[-116.553473,45.499107],[-116.554829,45.46293],[-116.588195,45.44292],[-116.597447,45.41277],[-116.673793,45.321511],[-116.674493,45.276349],[-116.703607,45.239757],[-116.728757,45.144381],[-116.774847,45.105536],[-116.797329,45.060267],[-116.847944,45.022602],[-116.844625,45.001435],[-116.858313,44.978761],[-116.83199,44.933007],[-116.852427,44.887577],[-116.928099,44.808381],[-116.9347,44.783881],[-117.03827,44.748179],[-117.062273,44.727143],[-117.061799,44.706654],[-117.095868,44.664737],[-117.124754,44.583834],[-117.148255,44.564371],[-117.149242,44.536151],[-117.224104,44.483734],[-117.215072,44.427162],[-117.242675,44.396548],[-117.235117,44.373853],[-117.189769,44.336585],[-117.220069,44.301382],[-117.198147,44.273828],[-117.143394,44.258262],[-117.104208,44.27994],[-117.050057,44.22883],[-117.027558,44.248881],[-116.975905,44.242844],[-116.971675,44.197256],[-116.925392,44.191544],[-116.894083,44.160191],[-116.933704,44.100039],[-116.974253,44.088295],[-116.974016,44.053663],[-116.937342,44.029376],[-116.936765,44.010608],[-116.942346,43.989106],[-116.971436,43.964998],[-116.96247,43.928336],[-116.982347,43.86884],[-117.01077,43.862269],[-117.026143,43.83448],[-117.026222,42.000252],[-119.999168,41.99454]]],[[[-111.048974,44.474072],[-111.131379,44.499925],[-111.143557,44.535732],[-111.23018,44.587025],[-111.224161,44.623402],[-111.25268,44.651092],[-111.276956,44.655626],[-111.26875,44.668279],[-111.29626,44.702271],[-111.323669,44.724474],[-111.355768,44.727602],[-111.385005,44.755128],[-111.414271,44.710741],[-111.438793,44.720546],[-111.490228,44.700221],[-111.468833,44.679335],[-111.473178,44.665479],[-111.525764,44.604883],[-111.519126,44.582916],[-111.467736,44.544521],[-111.500792,44.540062],[-111.585763,44.562843],[-111.614405,44.548991],[-111.704218,44.560205],[-111.715474,44.543543],[-111.821488,44.509286],[-111.870504,44.564033],[-111.947941,44.556776],[-111.980833,44.536682],[-112.032707,44.546642],[-112.036943,44.530323],[-112.069011,44.537104],[-112.101564,44.520847],[-112.136454,44.539911],[-112.179703,44.533021],[-112.221698,44.543519],[-112.242785,44.568091],[-112.286187,44.568472],[-112.315008,44.5419],[-112.35421,44.535638],[-112.358926,44.48628],[-112.387389,44.448058],[-112.473207,44.480027],[-112.50031,44.463051],[-112.541989,44.483971],[-112.660696,44.485756],[-112.71911,44.504344],[-112.781294,44.484888],[-112.836034,44.422653],[-112.81324,44.378103],[-112.855395,44.359975],[-112.886041,44.395874],[-112.951146,44.416699],[-113.003544,44.450814],[-113.020917,44.493827],[-113.019777,44.528505],[-113.083819,44.60222],[-113.049349,44.62938],[-113.068306,44.656374],[-113.06776,44.679474],[-113.098064,44.697477],[-113.102138,44.729027],[-113.134824,44.752763],[-113.131453,44.772837],[-113.247166,44.82295],[-113.341704,44.784853],[-113.354034,44.791745],[-113.356062,44.819798],[-113.377153,44.834858],[-113.422376,44.842595],[-113.455071,44.865424],[-113.498745,44.942314],[-113.443782,44.95989],[-113.437726,45.006967],[-113.45197,45.059247],[-113.485278,45.063519],[-113.520134,45.093033],[-113.506638,45.107288],[-113.513342,45.115225],[-113.554744,45.112901],[-113.57467,45.128411],[-113.599506,45.191114],[-113.684946,45.253706],[-113.689359,45.28355],[-113.735601,45.325265],[-113.734402,45.392353],[-113.765203,45.410601],[-113.763368,45.427732],[-113.783272,45.451839],[-113.759986,45.480735],[-113.766022,45.520621],[-113.834555,45.520729],[-113.804796,45.580358],[-113.806729,45.602146],[-113.861404,45.62366],[-113.904691,45.622007],[-113.898883,45.644167],[-113.93422,45.682232],[-113.986656,45.704564],[-114.015633,45.696127],[-114.018731,45.648616],[-114.067619,45.627706],[-114.086584,45.59118],[-114.122322,45.58426],[-114.135249,45.557465],[-114.180043,45.551432],[-114.192802,45.536596],[-114.248121,45.545877],[-114.270717,45.486116],[-114.333218,45.459316],[-114.360719,45.474116],[-114.36562,45.490416],[-114.415804,45.509753],[-114.456764,45.543983],[-114.460542,45.561283],[-114.559038,45.565706],[-114.538132,45.606834],[-114.563652,45.637412],[-114.507645,45.658949],[-114.495421,45.703321],[-114.566172,45.773864],[-114.509303,45.845531],[-114.44868,45.858891],[-114.409477,45.85164],[-114.388243,45.88234],[-114.431159,45.935737],[-114.403712,45.967049],[-114.470965,45.995742],[-114.480241,46.030325],[-114.493418,46.03717],[-114.468529,46.062484],[-114.460049,46.097104],[-114.5213,46.125287],[-114.527096,46.146218],[-114.514706,46.167726],[-114.478333,46.160876],[-114.445928,46.173933],[-114.449819,46.237119],[-114.468254,46.248796],[-114.470479,46.26732],[-114.427309,46.283624],[-114.433478,46.305502],[-114.410682,46.360673],[-114.422458,46.387097],[-114.384756,46.411784],[-114.376413,46.442983],[-114.403019,46.498675],[-114.35874,46.505306],[-114.342072,46.519679],[-114.349208,46.529514],[-114.322519,46.611066],[-114.32456,46.653579],[-114.360709,46.669059],[-114.424424,46.660648],[-114.466902,46.631695],[-114.547321,46.644485],[-114.593292,46.632848],[-114.615036,46.639733],[-114.614716,46.655256],[-114.642713,46.673145],[-114.620859,46.707415],[-114.649388,46.73289],[-114.696656,46.740572],[-114.710425,46.717704],[-114.76689,46.696901],[-114.787065,46.711255],[-114.765106,46.758153],[-114.79004,46.778729],[-114.829117,46.782503],[-114.861376,46.81196],[-114.888146,46.808573],[-114.920459,46.827697],[-114.928615,46.854815],[-114.947413,46.859324],[-114.931608,46.876799],[-114.929997,46.919625],[-114.960597,46.93001],[-115.00091,46.967703],[-115.047857,46.969533],[-115.087806,47.045519],[-115.120917,47.061237],[-115.140375,47.093013],[-115.200547,47.139154],[-115.243707,47.150347],[-115.261885,47.181742],[-115.300504,47.188139],[-115.294785,47.220914],[-115.326903,47.255912],[-115.410685,47.264228],[-115.428359,47.278722],[-115.51186,47.295219],[-115.548658,47.332213],[-115.551079,47.349856],[-115.578619,47.367007],[-115.639186,47.378605],[-115.657681,47.400651],[-115.728801,47.428925],[-115.718247,47.45316],[-115.663867,47.456936],[-115.653044,47.476035],[-115.686704,47.485596],[-115.71034,47.52951],[-115.747263,47.543197],[-115.734674,47.567401],[-115.689404,47.595402],[-115.694284,47.62346],[-115.73627,47.654762],[-115.72377,47.696671],[-115.77177,47.717412],[-115.797299,47.75752],[-115.831755,47.755785],[-115.852291,47.827991],[-115.881522,47.849672],[-115.906409,47.846261],[-116.030751,47.973349],[-116.048421,47.97682],[-116.049193,49.000912],[-104.048736,48.999877],[-104.039977,45.124988],[-104.040128,44.999987],[-104.057698,44.997431],[-104.053249,41.001406],[-111.046723,40.997959],[-111.048974,44.474072]]]]},\"properties\":{\"name\":\"California\",\"nation\":\"USA  \"}}]}","volume":"236","publishingServiceCenter":{"id":15,"text":"Madison PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Russell, Robin E. 0000-0001-8726-7303 rerussell@usgs.gov","orcid":"https://orcid.org/0000-0001-8726-7303","contributorId":3998,"corporation":false,"usgs":true,"family":"Russell","given":"Robin","email":"rerussell@usgs.gov","middleInitial":"E.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":763711,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Halstead, Brian J. 0000-0002-5535-6528 bhalstead@usgs.gov","orcid":"https://orcid.org/0000-0002-5535-6528","contributorId":3051,"corporation":false,"usgs":true,"family":"Halstead","given":"Brian J.","email":"bhalstead@usgs.gov","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":763713,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Mosher, Brittany 0000-0002-8458-9056","orcid":"https://orcid.org/0000-0002-8458-9056","contributorId":216035,"corporation":false,"usgs":true,"family":"Mosher","given":"Brittany","email":"","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":763712,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Muths, Erin L. 0000-0002-5498-3132 muthse@usgs.gov","orcid":"https://orcid.org/0000-0002-5498-3132","contributorId":1260,"corporation":false,"usgs":true,"family":"Muths","given":"Erin","email":"muthse@usgs.gov","middleInitial":"L.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":763714,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Adams, Michael J. 0000-0001-8844-042X","orcid":"https://orcid.org/0000-0001-8844-042X","contributorId":211916,"corporation":false,"usgs":true,"family":"Adams","given":"Michael","email":"","middleInitial":"J.","affiliations":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":763715,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Campbell Grant, Evan H. 0000-0003-4401-6496 ehgrant@usgs.gov","orcid":"https://orcid.org/0000-0003-4401-6496","contributorId":150443,"corporation":false,"usgs":true,"family":"Campbell Grant","given":"Evan","email":"ehgrant@usgs.gov","middleInitial":"H.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":763716,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Fisher, Robert N. 0000-0002-2956-3240 rfisher@usgs.gov","orcid":"https://orcid.org/0000-0002-2956-3240","contributorId":1529,"corporation":false,"usgs":true,"family":"Fisher","given":"Robert","email":"rfisher@usgs.gov","middleInitial":"N.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":763717,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Kleeman, Patrick M. 0000-0001-6567-3239 pkleeman@usgs.gov","orcid":"https://orcid.org/0000-0001-6567-3239","contributorId":3948,"corporation":false,"usgs":true,"family":"Kleeman","given":"Patrick","email":"pkleeman@usgs.gov","middleInitial":"M.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":763718,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Backlin, Adam R. 0000-0001-5618-8426 abacklin@usgs.gov","orcid":"https://orcid.org/0000-0001-5618-8426","contributorId":3802,"corporation":false,"usgs":true,"family":"Backlin","given":"Adam","email":"abacklin@usgs.gov","middleInitial":"R.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":763719,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Pearl, Christopher 0000-0003-2943-7321 christopher_pearl@usgs.gov","orcid":"https://orcid.org/0000-0003-2943-7321","contributorId":172669,"corporation":false,"usgs":true,"family":"Pearl","given":"Christopher","email":"christopher_pearl@usgs.gov","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true},{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":763720,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Honeycutt, R. Ken 0000-0002-7157-7195 rhoneycutt@usgs.gov","orcid":"https://orcid.org/0000-0002-7157-7195","contributorId":156282,"corporation":false,"usgs":true,"family":"Honeycutt","given":"R.","email":"rhoneycutt@usgs.gov","middleInitial":"Ken","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true}],"preferred":true,"id":763721,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Hossack, Blake R. 0000-0001-7456-9564 blake_hossack@usgs.gov","orcid":"https://orcid.org/0000-0001-7456-9564","contributorId":1177,"corporation":false,"usgs":true,"family":"Hossack","given":"Blake","email":"blake_hossack@usgs.gov","middleInitial":"R.","affiliations":[{"id":481,"text":"Northern Rocky Mountain Science Center","active":true,"usgs":true},{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":763722,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70203932,"text":"70203932 - 2019 - Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate","interactions":[],"lastModifiedDate":"2019-06-25T09:26:01","indexId":"70203932","displayToPublicDate":"2019-06-05T09:25:46","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3174,"text":"Proceedings of the Royal Society B: Biological Sciences","active":true,"publicationSubtype":{"id":10}},"title":"Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate","docAbstract":"<p><span>The importance of long-distance dispersal (LDD) in shaping geographical distributions has been debated since the nineteenth century. In terrestrial vertebrates, LDD events across large water bodies are considered highly improbable, but organismal traits affecting dispersal capacity are generally not taken into account. Here, we focus on a recent lizard radiation and combine a summary-coalescent species tree based on 1225 exons with a probabilistic model that links dispersal capacity to an evolving trait, to investigate whether ecological specialization has influenced the probability of trans-oceanic dispersal.&nbsp;</span><i>Cryptoblepharus</i><span>&nbsp;species that occur in coastal habitats have on average dispersed 13 to 14 times more frequently than non-coastal species and coastal specialization has, therefore, led to an extraordinarily widespread distribution that includes multiple continents and distant island archipelagoes. Furthermore, their presence across the Pacific substantially predates the age of human colonization and we can explicitly reject the possibility that these patterns are solely shaped by human-mediated dispersal. Overall, by combining new analytical methods with a comprehensive phylogenomic dataset, we use a quantitative framework to show how coastal specialization can influence dispersal capacity and eventually shape geographical distributions at a macroevolutionary scale.</span></p>","language":"English","publisher":"Royal Society","doi":"10.1098/rspb.2018.2575","usgsCitation":"Blom, M.P., Matzke, N.J., Bragg, J., Arida, E., Austin, C.C., Backlin, A.R., Carretero, M.A., Fisher, R.N., Glaw, F., Hathaway, S.A., Iskandar, D.T., McGuire, J.A., Karin, B.R., Reilly, S.B., Rittmeyer, E.N., Rocha, S., Sanchez, M., Stubbs, A.L., Vences, M., and Moritz, C., 2019, Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate: Proceedings of the Royal Society B: Biological Sciences, v. 286, no. 1904, 20182575 , https://doi.org/10.1098/rspb.2018.2575.","productDescription":"20182575 ","ipdsId":"IP-104974","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":467559,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://digitalcommons.lsu.edu/biosci_pubs/29","text":"Publisher Index Page"},{"id":364993,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"286","issue":"1904","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"noUsgsAuthors":false,"publicationDate":"2019-06-05","publicationStatus":"PW","contributors":{"authors":[{"text":"Blom, Mozes P.K.","contributorId":216467,"corporation":false,"usgs":false,"family":"Blom","given":"Mozes","email":"","middleInitial":"P.K.","affiliations":[{"id":39447,"text":"The Australian National University, Canberra, Australi","active":true,"usgs":false}],"preferred":false,"id":764803,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Matzke, Nicholas J","contributorId":216468,"corporation":false,"usgs":false,"family":"Matzke","given":"Nicholas","email":"","middleInitial":"J","affiliations":[{"id":39447,"text":"The Australian National University, Canberra, Australi","active":true,"usgs":false}],"preferred":false,"id":764804,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bragg, Jason G","contributorId":216469,"corporation":false,"usgs":false,"family":"Bragg","given":"Jason G","affiliations":[{"id":39447,"text":"The Australian National University, Canberra, Australi","active":true,"usgs":false}],"preferred":false,"id":764805,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Arida, Evy","contributorId":216470,"corporation":false,"usgs":false,"family":"Arida","given":"Evy","email":"","affiliations":[{"id":39448,"text":", The Indonesian Institute of Sciences, Cibinong, Indonesia","active":true,"usgs":false}],"preferred":false,"id":764806,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Austin, Christopher C.","contributorId":216471,"corporation":false,"usgs":false,"family":"Austin","given":"Christopher","email":"","middleInitial":"C.","affiliations":[{"id":39449,"text":"Louisiana State University, Baton Rouge","active":true,"usgs":false}],"preferred":false,"id":764807,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Backlin, Adam R. 0000-0001-5618-8426 abacklin@usgs.gov","orcid":"https://orcid.org/0000-0001-5618-8426","contributorId":3802,"corporation":false,"usgs":true,"family":"Backlin","given":"Adam","email":"abacklin@usgs.gov","middleInitial":"R.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":764808,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Carretero, Miguel A","contributorId":216472,"corporation":false,"usgs":false,"family":"Carretero","given":"Miguel","email":"","middleInitial":"A","affiliations":[{"id":39450,"text":"University of Porto, Porto, Portugal","active":true,"usgs":false}],"preferred":false,"id":764809,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Fisher, Robert N. 0000-0002-2956-3240 rfisher@usgs.gov","orcid":"https://orcid.org/0000-0002-2956-3240","contributorId":1529,"corporation":false,"usgs":true,"family":"Fisher","given":"Robert","email":"rfisher@usgs.gov","middleInitial":"N.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":764802,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Glaw, Frank","contributorId":147482,"corporation":false,"usgs":false,"family":"Glaw","given":"Frank","email":"","affiliations":[],"preferred":false,"id":764810,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Hathaway, Stacie A. 0000-0002-4167-8059","orcid":"https://orcid.org/0000-0002-4167-8059","contributorId":206793,"corporation":false,"usgs":true,"family":"Hathaway","given":"Stacie","email":"","middleInitial":"A.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":764811,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Iskandar, Djoko T","contributorId":216473,"corporation":false,"usgs":false,"family":"Iskandar","given":"Djoko","email":"","middleInitial":"T","affiliations":[{"id":39451,"text":"Institut Teknologi, Bandung, Indonesia","active":true,"usgs":false}],"preferred":false,"id":764812,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"McGuire, Jimmy A.","contributorId":216474,"corporation":false,"usgs":false,"family":"McGuire","given":"Jimmy","email":"","middleInitial":"A.","affiliations":[{"id":13243,"text":"University of California Berkeley","active":true,"usgs":false}],"preferred":false,"id":764813,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Karin, Benjamin R.","contributorId":216475,"corporation":false,"usgs":false,"family":"Karin","given":"Benjamin","email":"","middleInitial":"R.","affiliations":[{"id":13243,"text":"University of California Berkeley","active":true,"usgs":false}],"preferred":false,"id":764814,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Reilly, Sean B","contributorId":216476,"corporation":false,"usgs":false,"family":"Reilly","given":"Sean","email":"","middleInitial":"B","affiliations":[{"id":13243,"text":"University of California Berkeley","active":true,"usgs":false}],"preferred":false,"id":764815,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Rittmeyer, Eric N","contributorId":216477,"corporation":false,"usgs":false,"family":"Rittmeyer","given":"Eric","email":"","middleInitial":"N","affiliations":[{"id":39452,"text":", The Australian National University, Canberra, Australia","active":true,"usgs":false}],"preferred":false,"id":764816,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Rocha, Sara","contributorId":216478,"corporation":false,"usgs":false,"family":"Rocha","given":"Sara","email":"","affiliations":[{"id":39453,"text":"University of Vigo, Vigo, Spain","active":true,"usgs":false}],"preferred":false,"id":764817,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Sanchez, Mickael","contributorId":216479,"corporation":false,"usgs":false,"family":"Sanchez","given":"Mickael","email":"","affiliations":[{"id":39454,"text":"Association Nature Océan Indien, Petite Ile, Réunion","active":true,"usgs":false}],"preferred":false,"id":764818,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Stubbs, Alexander L.","contributorId":216480,"corporation":false,"usgs":false,"family":"Stubbs","given":"Alexander","email":"","middleInitial":"L.","affiliations":[{"id":13243,"text":"University of California Berkeley","active":true,"usgs":false}],"preferred":false,"id":764819,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Vences, Miguel","contributorId":216481,"corporation":false,"usgs":false,"family":"Vences","given":"Miguel","email":"","affiliations":[{"id":39455,"text":"Technical University of Braunschweig, Braunschweig, Germany","active":true,"usgs":false}],"preferred":false,"id":764820,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Moritz, Craig","contributorId":149462,"corporation":false,"usgs":false,"family":"Moritz","given":"Craig","email":"","affiliations":[{"id":17742,"text":"Research School of Biology, The Australian Nat'l U, Acton, Australia","active":true,"usgs":false}],"preferred":false,"id":764821,"contributorType":{"id":1,"text":"Authors"},"rank":20}]}}
,{"id":70202636,"text":"sir20195015 - 2019 - Evaluation of land subsidence and ground failures at Bicycle Basin, Fort Irwin National Training Center, California, 1992–2017","interactions":[],"lastModifiedDate":"2019-06-26T13:06:37","indexId":"sir20195015","displayToPublicDate":"2019-06-05T08:40:10","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-5015","displayTitle":"Evaluation of Land Subsidence and Ground Failures at Bicycle Basin, Fort Irwin National Training Center, California, 1992–2017","title":"Evaluation of land subsidence and ground failures at Bicycle Basin, Fort Irwin National Training Center, California, 1992–2017","docAbstract":"<div><div>Groundwater has been pumped in the Bicycle Basin&nbsp;at Fort Irwin National Training Center since the 1960s, and&nbsp;the amount pumped has generally increased since the 1990s.&nbsp;After a large crack (approximately 0.5-kilometer long) formed&nbsp;at the surface of Bicycle Lake playa during 2005–06 in the&nbsp;area used as an aircraft runway, a monitoring study was&nbsp;initiated by the U.S. Geological Survey, in cooperation with&nbsp;the U.S. Army Fort Irwin National Training Center, to help&nbsp;determine the cause. The extent and effect of groundwaterlevel&nbsp;declines and land-surface deformation in Bicycle Basin&nbsp;were evaluated using a number of approaches, including&nbsp;water-level measurements from December 2007 to June 2017,&nbsp;land surveys across the playa area, interferometric synthetic&nbsp;aperture radar (InSAR) analyses, geophysical surveys of the&nbsp;playa area, and numerical experiments to test hypotheses&nbsp;about soil mechanical processes. A specific objective of this&nbsp;study was to evaluate the recent development of ground&nbsp;failures in the form of large, surface cracks that pose a hazard&nbsp;to aircraft operations on the Bicycle Lake playa airstrip.</div><div><br data-mce-bogus=\"1\"></div><div>Another large crack and set of interconnected cracks formed at the surface of Bicycle Lake playa in 2013 following a period of inundation similar to that of 2005–06; however, the 2013 cracks formed a network rather than a single feature. Groundwater pumping resulted in more than 27 meters (90 feet) of water-level declines in wells north of the Bicycle Lake playa from 1990 to 2017, and InSAR interferograms indicated more than 400 millimeters (16 inches) of subsidence during 1993–2015. Subsidence rates calculated from InSAR interferograms were variable, temporally and spatially. Results of leveling surveys indicated differential subsidence between 2009 and 2016 along a transect across the playa to the area of maximum subsidence; there was less subsidence south of the 2005–06 crack than north of it. The steepest subsidence gradient for this time was in the area of maximum subsidence. Repeat tape-extensometer measurements from April 2009 to November 2017 across the main-runway crack indicated slight opening along part of the crack. A baseline lidar (light detection and ranging) survey of the main-runway crack was done in January 2009 to track the development of this feature. During the 95-months from January 2009 to December 2016, 0.5 meters (19.7 inches) of subsidence was observed next to the subsidence pit in the crack along the western end of the scanned area, presumably due to erosion and backfilling when the lake was inundated. Standing water in the crack along the eastern end of the scanned area prevented determining change for that part of the crack. Time-series, shaded-relief images show the progression of change in the crack from January 2009 through December 2016, with the crack closing and opening, depending on the time of most recent inundation relative to when the scans were taken. Volumetric changes in the size of the crack, calculated between the sequential lidar surveys, show that from 2009 to 2016, the cumulative volumetric change was 1.5 cubic meters (54 cubic feet). This volume is a minimum estimate because the crack volume below the water surface in the pits was not included in the calculations. Subsurface imaging of the 2005–06 main-runway crack by a series of electrical resistivity tomography surveys in 2008 and 2017 indicated that the crack could extend 5 meters (16 feet) in the subsurface.</div><div><br data-mce-bogus=\"1\"></div><div>Electromagnetic induction surveys in 2008, 2014, and 2015 evaluated the technique for ground-failure monitoring and showed that the technique was effective at revealing anomalies correlated with the features of concern in the playa area, such as the 2005–06 crack, numerous ”healed” macropolygon features, and scattered sink-like depressions.</div></div><div><br data-mce-bogus=\"1\"></div><div>Results from numerical experiments simulating watertable decline at depth indicated that the material deposits in the desaturating capillary fringe zone might not be able to transmit large enough stresses up through the overlying soil to cause cracks at the land surface. Results from simulations of desiccation in the presence of a regional tectonically induced stress field, however, tended to support the hypothesis that the combined processes could control the formation of giant desiccation macropolygons in certain areas, such as Bicycle Lake playa.</div>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20195015","collaboration":"Prepared in cooperation with the U.S. Army Fort Irwin National Training Center","usgsCitation":"Densmore, J.N., Ellett, K.M., Sneed, M., Brandt, J.T., Howle, J.F., Morita, A.Y., Borela, R., Bobet, A., and Thayer, D.C., 2019, Evaluation of land subsidence and ground failures at Bicycle Basin, Fort Irwin National Training Center, California, 1992–2017: U.S. Geological Survey Scientific Investigations Report 2019–5015, 93 p., https://doi.org/10.3133/sir20195015.","productDescription":"viii, 93 p.","numberOfPages":"106","onlineOnly":"Y","ipdsId":"IP-080849","costCenters":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"links":[{"id":364335,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2019/5015/coverthb.jpg"},{"id":364336,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2019/5015/sir20195015.pdf","text":"Report","size":"21 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2019-5015"}],"country":"United States","state":"California","county":"San Bernardino County","otherGeospatial":"Fort Irwin","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -117,\n              35\n            ],\n            [\n              -116,\n              35\n            ],\n            [\n              -116,\n              35.67\n            ],\n            [\n              -117,\n              35.67\n            ],\n            [\n              -117,\n              35\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a data-mce-href=\"https://www.usgs.gov/centers/ca-water/connect\" href=\"https://www.usgs.gov/centers/ca-water/connect\" target=\"_blank\" rel=\"noopener\">Director</a>,<br><a data-mce-href=\"https://ca.water.usgs.gov\" href=\"https://ca.water.usgs.gov\" target=\"_blank\" rel=\"noopener\">California Water Science Center</a><br><a data-mce-href=\"https://usgs.gov\" href=\"https://usgs.gov\" target=\"_blank\" rel=\"noopener\">U.S. Geological Survey</a><br>6000 J Street, Placer Hall<br>Sacramento, California 95819<br></p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Hydrogeologic Framework</li><li>Land-Surface Deformation Processes</li><li>Measurements and Methods</li><li>Results</li><li>Summary and Conclusions</li><li>References Cited</li><li>Appendixes</li></ul>","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"publishedDate":"2019-06-05","noUsgsAuthors":false,"publicationDate":"2019-06-05","publicationStatus":"PW","contributors":{"authors":[{"text":"Densmore, Jill N. 0000-0002-5345-6613 jidensmo@usgs.gov","orcid":"https://orcid.org/0000-0002-5345-6613","contributorId":197491,"corporation":false,"usgs":true,"family":"Densmore","given":"Jill","email":"jidensmo@usgs.gov","middleInitial":"N.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":759311,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ellett, Kevin M.","contributorId":205955,"corporation":false,"usgs":false,"family":"Ellett","given":"Kevin","email":"","middleInitial":"M.","affiliations":[{"id":37197,"text":"Indiana Geological and Water Survey, Indiana University","active":true,"usgs":false}],"preferred":false,"id":759312,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sneed, Michelle 0000-0002-8180-382X micsneed@usgs.gov","orcid":"https://orcid.org/0000-0002-8180-382X","contributorId":155,"corporation":false,"usgs":true,"family":"Sneed","given":"Michelle","email":"micsneed@usgs.gov","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":759313,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Brandt, Justin T. 0000-0002-9397-6824 jbrandt@usgs.gov","orcid":"https://orcid.org/0000-0002-9397-6824","contributorId":157,"corporation":false,"usgs":true,"family":"Brandt","given":"Justin","email":"jbrandt@usgs.gov","middleInitial":"T.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":759314,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Howle, James F. 0000-0003-0491-6203 jfhowle@usgs.gov","orcid":"https://orcid.org/0000-0003-0491-6203","contributorId":2225,"corporation":false,"usgs":true,"family":"Howle","given":"James","email":"jfhowle@usgs.gov","middleInitial":"F.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":759315,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Morita, Andrew Y. 0000-0002-8120-996X amorita@usgs.gov","orcid":"https://orcid.org/0000-0002-8120-996X","contributorId":1487,"corporation":false,"usgs":true,"family":"Morita","given":"Andrew","email":"amorita@usgs.gov","middleInitial":"Y.","affiliations":[{"id":154,"text":"California Water Science Center","active":true,"usgs":true}],"preferred":true,"id":759316,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Borela, Rodrigo 0000-0002-1802-8752","orcid":"https://orcid.org/0000-0002-1802-8752","contributorId":214190,"corporation":false,"usgs":false,"family":"Borela","given":"Rodrigo","email":"","affiliations":[{"id":38990,"text":"Indiana Geological Survey; Indiana University","active":true,"usgs":false}],"preferred":false,"id":763653,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Bobet, Antonio 0000-0002-5666-5832","orcid":"https://orcid.org/0000-0002-5666-5832","contributorId":214191,"corporation":false,"usgs":false,"family":"Bobet","given":"Antonio","email":"","affiliations":[{"id":37145,"text":"Indiana University","active":true,"usgs":false}],"preferred":false,"id":763654,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Thayer, Drew C. 0000-0001-9251-935X","orcid":"https://orcid.org/0000-0001-9251-935X","contributorId":214192,"corporation":false,"usgs":true,"family":"Thayer","given":"Drew","email":"","middleInitial":"C.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":763655,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70205957,"text":"70205957 - 2019 - The development and delivery of species distribution models to inform decision-making","interactions":[],"lastModifiedDate":"2019-10-14T06:54:31","indexId":"70205957","displayToPublicDate":"2019-06-05T06:53:44","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":997,"text":"BioScience","active":true,"publicationSubtype":{"id":10}},"title":"The development and delivery of species distribution models to inform decision-making","docAbstract":"Information on where species occur is central to conservation and management decisions, but knowledge of distributions can be coarse or incomplete. Species distribution models provide a tool for mapping suitable habitat, and can produce credible, defensible, and repeatable predictive information with which to inform decisions. However, these models are sensitive to data inputs and methodological choices, making it important to assess the reliability and utility of model predictions. We provide a rubric that model developers can use to communicate a model’s attributes and its appropriate uses. We emphasize the importance of tailoring model development and delivery to the species of interest and the intended use, and the advantages of iterative modeling and validation. We highlight how species distribution models have been used to design surveys for new populations, prioritize actions across space, and support regulatory decision-making and compliance, tying these examples back to our rubric.","language":"English","publisher":"Oxford academic","doi":"10.1093/biosci/biz045","usgsCitation":"Sofaer, H., Jarnevich, C.S., Pearse, I.S., Smyth, R.L., Auer, S., L, C.G., Edwards, T., Guala, G.F., Howard, T.G., Morisette, J., and Hamilton, H., 2019, The development and delivery of species distribution models to inform decision-making: BioScience, v. 69, no. 7, p. 544-557, https://doi.org/10.1093/biosci/biz045.","productDescription":"14 p.","startPage":"544","endPage":"557","ipdsId":"IP-097200","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":467560,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1093/biosci/biz045","text":"Publisher Index Page"},{"id":368291,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"69","issue":"7","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2019-06-05","publicationStatus":"PW","contributors":{"authors":[{"text":"Sofaer, Helen R. 0000-0002-9450-5223","orcid":"https://orcid.org/0000-0002-9450-5223","contributorId":216681,"corporation":false,"usgs":true,"family":"Sofaer","given":"Helen","middleInitial":"R.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":773039,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Jarnevich, Catherine S. 0000-0002-9699-2336 jarnevichc@usgs.gov","orcid":"https://orcid.org/0000-0002-9699-2336","contributorId":3424,"corporation":false,"usgs":true,"family":"Jarnevich","given":"Catherine","email":"jarnevichc@usgs.gov","middleInitial":"S.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":773040,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Pearse, Ian S. 0000-0001-7098-0495","orcid":"https://orcid.org/0000-0001-7098-0495","contributorId":216680,"corporation":false,"usgs":true,"family":"Pearse","given":"Ian","middleInitial":"S.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":773041,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Smyth, Regan L","contributorId":219729,"corporation":false,"usgs":false,"family":"Smyth","given":"Regan","email":"","middleInitial":"L","affiliations":[{"id":17658,"text":"NatureServe","active":true,"usgs":false}],"preferred":false,"id":773042,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Auer, Stephanie","contributorId":219730,"corporation":false,"usgs":false,"family":"Auer","given":"Stephanie","email":"","affiliations":[],"preferred":false,"id":773043,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"L, Cook Gericke","contributorId":219731,"corporation":false,"usgs":false,"family":"L","given":"Cook","email":"","middleInitial":"Gericke","affiliations":[{"id":37295,"text":"USDA APHIS","active":true,"usgs":false}],"preferred":false,"id":773044,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Edwards, Thomas C. Jr. 0000-0002-0773-0909 tce@usgs.gov","orcid":"https://orcid.org/0000-0002-0773-0909","contributorId":191916,"corporation":false,"usgs":true,"family":"Edwards","given":"Thomas C.","suffix":"Jr.","email":"tce@usgs.gov","affiliations":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":false,"id":773045,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Guala, Gerald F. 0000-0002-4972-3782 gguala@usgs.gov","orcid":"https://orcid.org/0000-0002-4972-3782","contributorId":206063,"corporation":false,"usgs":true,"family":"Guala","given":"Gerald","email":"gguala@usgs.gov","middleInitial":"F.","affiliations":[{"id":5069,"text":"Office of the AD Core Science Systems","active":true,"usgs":true},{"id":208,"text":"Core Science Analytics and Synthesis","active":true,"usgs":true}],"preferred":true,"id":773046,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Howard, Timothy G","contributorId":219732,"corporation":false,"usgs":false,"family":"Howard","given":"Timothy","email":"","middleInitial":"G","affiliations":[{"id":40055,"text":"NY Natural Heritage","active":true,"usgs":false}],"preferred":false,"id":773047,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Morisette, Jeffrey T.","contributorId":219733,"corporation":false,"usgs":false,"family":"Morisette","given":"Jeffrey T.","affiliations":[{"id":40056,"text":"National Invasive Species Council","active":true,"usgs":false}],"preferred":false,"id":773048,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Hamilton, Healy","contributorId":192401,"corporation":false,"usgs":false,"family":"Hamilton","given":"Healy","email":"","affiliations":[],"preferred":false,"id":773049,"contributorType":{"id":1,"text":"Authors"},"rank":11}]}}
,{"id":70204175,"text":"70204175 - 2019 - The risk reduction benefits of the Mesoamerican Reef in Mexico","interactions":[],"lastModifiedDate":"2019-07-26T13:10:13","indexId":"70204175","displayToPublicDate":"2019-06-04T17:46:34","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5232,"text":"Frontiers in Earth Science","onlineIssn":"2296-6463","active":true,"publicationSubtype":{"id":10}},"title":"The risk reduction benefits of the Mesoamerican Reef in Mexico","docAbstract":"<p><span>Coastal development and climate change are dramatically increasing the risks of flooding, erosion, and extreme weather events. Coral reefs and other coastal ecosystems act as natural defenses against coastal hazards, but their degradation increases risk to people and property. Environmental degradation, however, has rarely been quantified as a driver of coastal risk. In Quintana Roo, Mexico, a region on the Mexican Caribbean coast with an annual tourism economy of 10 billion USD, coral reefs constitute a natural barrier against flooding from hurricanes. This study spatially quantifies the risk reduction benefits of the Mesoamerican Reef in Quintana Roo for people, buildings, and hotel infrastructure. The risk reduction benefits are substantial. For example, the reefs prevented 43% additional damage during Hurricane Dean in (2007) and provide nowadays hazard risk reduction for 4.3% of the people, 1.9% of the built capital, and 2.4% of the hotel infrastructure, per year. The annual benefits are estimated in 4,600 people, 42 million USD damage prevention for buildings, and 20.8 million USD for hotel infrastructure. The study also compares the risk reduction of coral reefs with (i) the protection offered by dunes and (ii) the increase in coastal risk from sea-level rise (SLR). The risk reduction of dunes is more critical where there are no coral reefs offshore and for small return-periods storms. Sea-level rise, however, will make the more frequent storms more impactful and will drive significant increases in annual expected damages across the region. However, we demonstrate that, in coral reef environments, the contribution of reef degradation to coastal risk is larger than the expected increase in risk from SLR. However, the spatial distribution of the risk reduction benefits from reefs differs for people and infrastructure, and in particular for hotels, which receive the most protection from reefs. Furthermore, many sections present larger benefits than the typical costs of restoration. This valuation makes a compelling case for protecting and maintaining this natural infrastructure for its risk reduction service, but also allows the development of piloting innovative strategies, such as risk finance and insurance strategies, that can align environmental and risk management goals.</span></p>","language":"English","publisher":"Frontiers Media","doi":"10.3389/feart.2019.00125","usgsCitation":"Reguero, B.G., Secaira, F., Toimil, A., Escudero, M., Diaz-Simal, P., Beck, M., Silva, R., Storlazzi, C.D., and Losada, I., 2019, The risk reduction benefits of the Mesoamerican Reef in Mexico: Frontiers in Earth Science, v. 7, 125, 21 p., https://doi.org/10.3389/feart.2019.00125.","productDescription":"125, 21 p.","ipdsId":"IP-105572","costCenters":[{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true},{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":460365,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3389/feart.2019.00125","text":"Publisher Index Page"},{"id":365404,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"Mexico","otherGeospatial":"Mesoamerican Reef","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -87.132568359375,\n              21.570610571132665\n            ],\n            [\n              -87.0391845703125,\n              21.524627220545295\n            ],\n            [\n              -86.912841796875,\n              21.350781150679737\n            ],\n            [\n              -86.8634033203125,\n              21.171606338272724\n            ],\n            [\n              -86.90185546874999,\n              20.884475328885344\n            ],\n            [\n              -87.07763671875,\n              20.648205934292623\n            ],\n            [\n              -87.3577880859375,\n              20.390974413170618\n            ],\n            [\n              -87.4896240234375,\n              20.174567450431844\n            ],\n            [\n              -87.53356933593749,\n              20.1023648329449\n            ],\n            [\n              -87.5115966796875,\n              19.95785974817016\n            ],\n            [\n              -87.4951171875,\n              19.87005983797396\n            ],\n            [\n              -87.5115966796875,\n              19.80805412808859\n            ],\n            [\n              -87.462158203125,\n              19.53390722018251\n            ],\n            [\n              -87.53356933593749,\n              19.409611549990895\n            ],\n            [\n              -87.47314453125,\n              19.31114335506464\n            ],\n            [\n              -87.53356933593749,\n              19.233363381183896\n            ],\n            [\n              -87.56103515625,\n              19.12440952808487\n            ],\n            [\n              -87.659912109375,\n              18.885497977462876\n            ],\n            [\n              -87.73681640625,\n              18.703488628334817\n            ],\n            [\n              -87.769775390625,\n              18.516074596589366\n            ],\n            [\n              -87.857666015625,\n              18.31802573200145\n            ],\n            [\n              -87.8961181640625,\n              18.088422664636212\n            ],\n            [\n              -87.95654296875,\n              17.96828290799978\n            ],\n            [\n              -87.86865234374999,\n              17.994407217139745\n            ],\n            [\n              -87.396240234375,\n              19.34742802788708\n            ],\n            [\n              -87.4346923828125,\n              19.4303341116379\n            ],\n            [\n              -87.3907470703125,\n              19.87005983797396\n            ],\n            [\n              -87.4017333984375,\n              20.159098270646936\n            ],\n            [\n              -87.0281982421875,\n              20.571081893508193\n            ],\n            [\n              -86.7645263671875,\n              20.971698530475734\n            ],\n            [\n              -86.6766357421875,\n              21.14599216495789\n            ],\n            [\n              -86.693115234375,\n              21.320080964008206\n            ],\n            [\n              -86.8853759765625,\n              21.55017532555692\n            ],\n            [\n              -87.07763671875,\n              21.631899013188953\n            ],\n            [\n              -87.1160888671875,\n              21.631899013188953\n            ],\n            [\n              -87.132568359375,\n              21.570610571132665\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"7","noUsgsAuthors":false,"publicationDate":"2019-05-28","publicationStatus":"PW","contributors":{"authors":[{"text":"Reguero, Borja G. 0000-0001-5526-7157","orcid":"https://orcid.org/0000-0001-5526-7157","contributorId":193831,"corporation":false,"usgs":false,"family":"Reguero","given":"Borja","email":"","middleInitial":"G.","affiliations":[{"id":6949,"text":"University of California, Santa Cruz","active":true,"usgs":false}],"preferred":true,"id":765919,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Secaira, Fernando","contributorId":216858,"corporation":false,"usgs":false,"family":"Secaira","given":"Fernando","email":"","affiliations":[],"preferred":false,"id":765920,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Toimil, Alexandra","contributorId":216859,"corporation":false,"usgs":false,"family":"Toimil","given":"Alexandra","email":"","affiliations":[],"preferred":false,"id":765921,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Escudero, Mireille","contributorId":216860,"corporation":false,"usgs":false,"family":"Escudero","given":"Mireille","email":"","affiliations":[],"preferred":false,"id":765922,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Diaz-Simal, Pedro","contributorId":216861,"corporation":false,"usgs":false,"family":"Diaz-Simal","given":"Pedro","email":"","affiliations":[],"preferred":false,"id":765923,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Beck, Michael W.","contributorId":60140,"corporation":false,"usgs":true,"family":"Beck","given":"Michael W.","affiliations":[],"preferred":false,"id":765924,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Silva, Rodolfo","contributorId":216862,"corporation":false,"usgs":false,"family":"Silva","given":"Rodolfo","email":"","affiliations":[],"preferred":false,"id":765925,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Storlazzi, Curt D. 0000-0001-8057-4490 cstorlazzi@usgs.gov","orcid":"https://orcid.org/0000-0001-8057-4490","contributorId":140584,"corporation":false,"usgs":true,"family":"Storlazzi","given":"Curt","email":"cstorlazzi@usgs.gov","middleInitial":"D.","affiliations":[{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true},{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":765926,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Losada, Inigo","contributorId":199206,"corporation":false,"usgs":false,"family":"Losada","given":"Inigo","email":"","affiliations":[],"preferred":false,"id":765927,"contributorType":{"id":1,"text":"Authors"},"rank":9}]}}
,{"id":70203651,"text":"sir20195034 - 2019 - Gap Analysis Project (GAP) Terrestrial Vertebrate Species Richness Maps for the Conterminous U.S.","interactions":[],"lastModifiedDate":"2019-06-06T12:10:44","indexId":"sir20195034","displayToPublicDate":"2019-06-04T16:30:00","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-5034","title":"Gap Analysis Project (GAP) Terrestrial Vertebrate Species Richness Maps for the Conterminous U.S.","docAbstract":"<p>The mission of the Gap Analysis Project (GAP) is to support national and regional assessments of the conservation status of vertebrate species and plant communities. This report explains conterminous United States species richness maps created by the U.S. Geological Survey for four major classes in the phylum Chordata: mammals, birds, reptiles, and amphibians. In this work, we focus on terrestrial vertebrate species and the spatial patterns of richness derived from species’ habitat distribution models. We created species’ habitat distribution models for 1,590 species (282 amphibians, 621 birds, 365 mammals, 322 reptiles) and an additional 129 subspecies (2 amphibians, 28 birds, 94 mammals, 5 reptiles) that occur in the conterminous United States. The 1,590 species level models were spatially combined to create the taxa richness maps at a spatial resolution of 30 meters. Based on those maps we identified the maximum species richness for each of the taxa (43 amphibians, 163 birds, 72 mammals, and 54 reptiles) and show variation in richness across the conterminous United States. Because these habitat models remove unsuitable areas within the range of the species, the patterns of richness presented here are different from the coarse-resolution species’ habitat distribution models commonly presented in the literature. These maps provide a new, more spatially refined richness map. In addition, since these models are logically linked to mapped data layers that constitute habitat suitability, this suite of data can provide an intuitive data system for further exploration of biodiversity and implications for change at ecosystem and landscape scales.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston VA","doi":"10.3133/sir20195034","collaboration":"Prepared in cooperation with North Carolina State University, New Mexico State University, and Boise State University","usgsCitation":"Gergely, K.J., Boykin, K.G., McKerrow, A.J., Rubino, M.J., Tarr, N.M., and Williams, S.G., 2019, Gap Analysis Project (GAP) terrestrial vertebrate species richness maps for the conterminous U.S.: U.S. Geological Survey Scientific Investigations Report 2019–5034, 99 p., https://doi.org/10.3133/sir20195034.","productDescription":"v, 99 p.","numberOfPages":"110","onlineOnly":"Y","ipdsId":"IP-099179","costCenters":[{"id":208,"text":"Core Science Analytics and Synthesis","active":true,"usgs":true},{"id":38315,"text":"GAP Analysis Project","active":true,"usgs":true}],"links":[{"id":364342,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7V122T2","text":"USGS data release","linkHelpText":"U.S. Geological Survey - Gap Analysis Project Species Habitat Maps CONUS_2001"},{"id":364248,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7Q81B3R","text":"USGS data release","linkHelpText":"U.S. Geological Survey - Gap Analysis Project Species Range Maps CONUS_2001"},{"id":364247,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2019/5034/sir20195034.pdf","text":"Report","size":"7.26 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2019–5034"},{"id":364246,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2019/5034/coverthb.jpg"}],"contact":"<p>Director, <a href=\"https://www.usgs.gov/core-science-systems/science-analytics-and-synthesis/\" data-mce-href=\"https://www.usgs.gov/core-science-systems/science-analytics-and-synthesis/\">Core Science Analytics and Synthesis</a><br>U.S. Geological Survey<br>Box 25046, MS-302<br>Denver, CO 80225-0046</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Methods</li><li>GAP Wildlife Habitat Relations Models (WHRMs) and Their Associated Habitat Maps Can be Useful in the Following Applications<br>&nbsp; The Species Habitat Distribution Maps<br>&nbsp; Other Literature Related to GAP Species Habitat Distribution Models</li><li>Data Access</li><li>Results</li><li>Programmatic Considerations</li><li>References Cited</li><li>Appendix 1. Ancillary Datasets and Model Parameter Used in Species’ Habitat Modeling</li><li>Appendix 2. Selected References for Information Used to Delineate Species’ Ranges</li><li>Appendix 3. Table of Notes on Species Taxonomy</li><li>Appendix 4. Table of Ancillary Datasets</li></ul>","publishedDate":"2019-06-04","noUsgsAuthors":false,"publicationDate":"2019-06-04","publicationStatus":"PW","contributors":{"authors":[{"text":"Gergely, Kevin J. 0000-0002-4379-2189 gergely@usgs.gov","orcid":"https://orcid.org/0000-0002-4379-2189","contributorId":2706,"corporation":false,"usgs":true,"family":"Gergely","given":"Kevin","email":"gergely@usgs.gov","middleInitial":"J.","affiliations":[{"id":208,"text":"Core Science Analytics and Synthesis","active":true,"usgs":true}],"preferred":true,"id":763426,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Boykin, Kenneth G. 0000-0001-6381-0463","orcid":"https://orcid.org/0000-0001-6381-0463","contributorId":43651,"corporation":false,"usgs":false,"family":"Boykin","given":"Kenneth","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":763427,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"McKerrow, Alexa 0000-0002-8312-2905 amckerrow@usgs.gov","orcid":"https://orcid.org/0000-0002-8312-2905","contributorId":127753,"corporation":false,"usgs":true,"family":"McKerrow","given":"Alexa","email":"amckerrow@usgs.gov","affiliations":[{"id":208,"text":"Core Science Analytics and Synthesis","active":true,"usgs":true}],"preferred":true,"id":763428,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Rubino, Matthew J. 0000-0003-0651-3053","orcid":"https://orcid.org/0000-0003-0651-3053","contributorId":141234,"corporation":false,"usgs":false,"family":"Rubino","given":"Matthew","email":"","middleInitial":"J.","affiliations":[{"id":39327,"text":"North Carolina Cooperative Fish and Wildlife Research Unit, Department of Applied Ecology, North Carolina State Univ.","active":true,"usgs":false}],"preferred":false,"id":763420,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Tarr, Nathan M. 0000-0003-2925-8948","orcid":"https://orcid.org/0000-0003-2925-8948","contributorId":208372,"corporation":false,"usgs":false,"family":"Tarr","given":"Nathan","email":"","middleInitial":"M.","affiliations":[{"id":39327,"text":"North Carolina Cooperative Fish and Wildlife Research Unit, Department of Applied Ecology, North Carolina State Univ.","active":true,"usgs":false}],"preferred":false,"id":763421,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Williams, Steven G. 0000-0003-3760-6818","orcid":"https://orcid.org/0000-0003-3760-6818","contributorId":215928,"corporation":false,"usgs":false,"family":"Williams","given":"Steven G.","affiliations":[],"preferred":false,"id":763431,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70204496,"text":"70204496 - 2019 - Integrating structure from motion, numerical modelling and field measurements to understand carbonate sediment transport in coral reef canopies","interactions":[],"lastModifiedDate":"2019-07-26T14:24:06","indexId":"70204496","displayToPublicDate":"2019-06-04T14:18:36","publicationYear":"2019","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"title":"Integrating structure from motion, numerical modelling and field measurements to understand carbonate sediment transport in coral reef canopies","docAbstract":"<p><span>Reef canopies are complex and extremely variable across a range of spatial scales. This variability affects the velocity above as well as within the canopy, and directly impacts the transport of sediment along the bed as well as suspended in the water column. How a canopy affects the transport of sediment is important to understand and predict changes in the position of the adjacent shoreline, particularly as reefs change. In this study, high-resolution seabed complexity models derived from photogrammetry for low roughness and high roughness canopy sites at Moloka’i (Hawai’i) are combined with direct field measurements and three-dimensional numerical modelling to investigate these canopy and sub-canopy impacts on velocity and sediment transport.</span></p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Coastal Sediments 2019 Proceedings","largerWorkSubtype":{"id":12,"text":"Conference publication"},"language":"English","publisher":"World Scientific","doi":"10.1142/9789811204487_0083","usgsCitation":"Pomeroy, A., Storlazzi, C.D., Rosenberger, K.J., Hatcher, G., and Warrick, J.A., 2019, Integrating structure from motion, numerical modelling and field measurements to understand carbonate sediment transport in coral reef canopies, <i>in</i> Coastal Sediments 2019 Proceedings, p. 959-969, https://doi.org/10.1142/9789811204487_0083.","productDescription":"11 p.","startPage":"959","endPage":"969","ipdsId":"IP-105554","costCenters":[],"links":[{"id":365999,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Hawaii","otherGeospatial":"Molokai","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -157.30911254882812,\n              21.01400911571511\n            ],\n            [\n              -156.70623779296875,\n              21.01400911571511\n            ],\n            [\n              -156.70623779296875,\n              21.27657804234913\n            ],\n            [\n              -157.30911254882812,\n              21.27657804234913\n            ],\n            [\n              -157.30911254882812,\n              21.01400911571511\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Pomeroy, Andrew","contributorId":182033,"corporation":false,"usgs":false,"family":"Pomeroy","given":"Andrew","affiliations":[],"preferred":false,"id":767239,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Storlazzi, Curt D. 0000-0001-8057-4490 cstorlazzi@usgs.gov","orcid":"https://orcid.org/0000-0001-8057-4490","contributorId":140584,"corporation":false,"usgs":true,"family":"Storlazzi","given":"Curt","email":"cstorlazzi@usgs.gov","middleInitial":"D.","affiliations":[{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true},{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":767240,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rosenberger, Kurt J. 0000-0002-5185-5776 krosenberger@usgs.gov","orcid":"https://orcid.org/0000-0002-5185-5776","contributorId":140453,"corporation":false,"usgs":true,"family":"Rosenberger","given":"Kurt","email":"krosenberger@usgs.gov","middleInitial":"J.","affiliations":[{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true},{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":767241,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Hatcher, Gerry ghatcher@usgs.gov","contributorId":3556,"corporation":false,"usgs":true,"family":"Hatcher","given":"Gerry","email":"ghatcher@usgs.gov","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":767242,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Warrick, Jonathan A. 0000-0002-0205-3814 jwarrick@usgs.gov","orcid":"https://orcid.org/0000-0002-0205-3814","contributorId":167736,"corporation":false,"usgs":true,"family":"Warrick","given":"Jonathan","email":"jwarrick@usgs.gov","middleInitial":"A.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":767243,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70204495,"text":"70204495 - 2019 - The influence of sea level on incident and infragravity wave-driven sediment dynamics across a fringing coral reef","interactions":[],"lastModifiedDate":"2019-07-26T14:15:04","indexId":"70204495","displayToPublicDate":"2019-06-04T14:07:58","publicationYear":"2019","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"title":"The influence of sea level on incident and infragravity wave-driven sediment dynamics across a fringing coral reef","docAbstract":"<p><span>Coral reefs generate significant volumes of carbonate sediment that becomes the primary source of beach material along many low-latitude shorelines that protect hundreds of millions of people globally. Despite this fact, there is little understanding of the specific processes that transport the carbonate sediment produced on the outer portions of coral reefs to the shoreline, let alone how those processes may be affected by projected sea-level rise. To better constrain the influence of sea-level rise on waves and sediment transport over a fringing coral reef flat, an experiment was conducted across the large fringing reef off the south shore of Moloka’i, Hawai’i, in the summer of 2018. Here we describe the influence of water levels on waves, currents, and the resulting sediment resuspension and fluxes observed during this field effort</span></p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Coastal Sediments 2019 Proceedings","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"World Scientific","doi":"10.1142/9789811204487_0087","usgsCitation":"Storlazzi, C.D., Cheriton, O., Rosenberger, K.J., Pomeroy, A., and Lowe, R.J., 2019, The influence of sea level on incident and infragravity wave-driven sediment dynamics across a fringing coral reef, <i>in</i> Coastal Sediments 2019 Proceedings, p. 998-1007, https://doi.org/10.1142/9789811204487_0087.","productDescription":"10 p.","startPage":"998","endPage":"1007","ipdsId":"IP-103631","costCenters":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":365998,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Hawaii","otherGeospatial":"Molokai","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -157.32009887695312,\n              21.00503514510042\n            ],\n            [\n              -156.6925048828125,\n              21.00503514510042\n            ],\n            [\n              -156.6925048828125,\n              21.220261047755002\n            ],\n            [\n              -157.32009887695312,\n              21.220261047755002\n            ],\n            [\n              -157.32009887695312,\n              21.00503514510042\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Storlazzi, Curt D. 0000-0001-8057-4490 cstorlazzi@usgs.gov","orcid":"https://orcid.org/0000-0001-8057-4490","contributorId":140584,"corporation":false,"usgs":true,"family":"Storlazzi","given":"Curt","email":"cstorlazzi@usgs.gov","middleInitial":"D.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true},{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":767234,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Cheriton, Olivia 0000-0003-3011-9136 ocheriton@usgs.gov","orcid":"https://orcid.org/0000-0003-3011-9136","contributorId":149003,"corporation":false,"usgs":true,"family":"Cheriton","given":"Olivia","email":"ocheriton@usgs.gov","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":767235,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rosenberger, Kurt J. 0000-0002-5185-5776 krosenberger@usgs.gov","orcid":"https://orcid.org/0000-0002-5185-5776","contributorId":140453,"corporation":false,"usgs":true,"family":"Rosenberger","given":"Kurt","email":"krosenberger@usgs.gov","middleInitial":"J.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true},{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":767236,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Pomeroy, Andrew","contributorId":182033,"corporation":false,"usgs":false,"family":"Pomeroy","given":"Andrew","affiliations":[],"preferred":false,"id":767237,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Lowe, Ryan J.","contributorId":152265,"corporation":false,"usgs":false,"family":"Lowe","given":"Ryan","email":"","middleInitial":"J.","affiliations":[{"id":6986,"text":"Stanford University","active":true,"usgs":false}],"preferred":false,"id":767238,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70203689,"text":"70203689 - 2019 - Measuring settling velocity in a strongly tidal estuary","interactions":[],"lastModifiedDate":"2019-07-26T13:09:31","indexId":"70203689","displayToPublicDate":"2019-06-04T13:40:32","publicationYear":"2019","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"Measuring settling velocity in a strongly tidal estuary","docAbstract":"Predicting sediment transport in estuarine systems requires understanding sediment settling velocity, its range of fluctuations, and the shortcomings of the tools to measure it. Previous studies have used Laser In-Situ Scattering and Transmissometry (LISST) instruments to measure particle size and Acoustic Doppler Velocimeters (ADV) to return estimates of settling velocity. We deployed both instruments over a 4-week period in summer 2016 in San Pablo Bay, CA, and observed conflicting results from the two instruments. The LISST indicated the settling velocity decreased with increasing bed shear stress, while the ADV showed that settling velocity increased. Comparing the experimental conditions from this study with previous research reveals that the ADV method requires steady state conditions that were not achieved. Although the ADV method uses easily measured quantities to return the settling velocity, it relies on assumptions that are not always valid in estuarine settings.","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Coastal Sediments 2019, Proceedings of the 9th International Conference","largerWorkSubtype":{"id":12,"text":"Conference publication"},"language":"English","publisher":"World Scientific","doi":"10.1142/9789811204487_0207","usgsCitation":"Allen, R., Lacy, J.R., and Variano, E.A., 2019, Measuring settling velocity in a strongly tidal estuary, <i>in</i> Coastal Sediments 2019, Proceedings of the 9th International Conference, p. 2423-2434, https://doi.org/10.1142/9789811204487_0207.","productDescription":"12 p.","startPage":"2423","endPage":"2434","ipdsId":"IP-104606","costCenters":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":364466,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","otherGeospatial":"San Pablo Bay","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.4041748046875,\n              38.15291731872143\n            ],\n            [\n              -122.41722106933594,\n              38.1313159665265\n            ],\n            [\n              -122.44537353515625,\n              38.11619121500379\n            ],\n            [\n              -122.45086669921875,\n              38.118892293285704\n            ],\n            [\n              -122.49343872070312,\n              38.11078875872392\n            ],\n            [\n              -122.48588562011717,\n              38.0756630533364\n            ],\n            [\n              -122.50030517578124,\n              38.019426820061696\n            ],\n            [\n              -122.44606018066406,\n              37.984798440032684\n            ],\n            [\n              -122.42340087890624,\n              37.96314739944216\n            ],\n            [\n              -122.39662170410156,\n              37.95123660520783\n            ],\n            [\n              -122.39112854003905,\n              37.95719224376526\n            ],\n            [\n              -122.39593505859376,\n              37.968560758280454\n            ],\n            [\n              -122.38288879394531,\n              37.97451499202459\n            ],\n            [\n              -122.37052917480469,\n              37.975597528091235\n            ],\n            [\n              -122.36022949218749,\n              37.98858671553364\n            ],\n            [\n              -122.36572265625,\n              38.0107712581413\n            ],\n            [\n              -122.3444366455078,\n              38.005902055387054\n            ],\n            [\n              -122.33001708984374,\n              38.00157360367438\n            ],\n            [\n              -122.31353759765624,\n              38.01185325927953\n            ],\n            [\n              -122.29774475097655,\n              38.01023025158327\n            ],\n            [\n              -122.288818359375,\n              38.023754217706944\n            ],\n            [\n              -122.28607177734376,\n              38.023213306976814\n            ],\n            [\n              -122.2723388671875,\n              38.038357297980816\n            ],\n            [\n              -122.26821899414061,\n              38.04052046968823\n            ],\n            [\n              -122.2613525390625,\n              38.04917251752295\n            ],\n            [\n              -122.244873046875,\n              38.05512020731343\n            ],\n            [\n              -122.22564697265625,\n              38.058364198044636\n            ],\n            [\n              -122.22633361816406,\n              38.065932950547484\n            ],\n            [\n              -122.23663330078124,\n              38.07512252602562\n            ],\n            [\n              -122.24624633789062,\n              38.077284611299554\n            ],\n            [\n              -122.27371215820312,\n              38.06539235133249\n            ],\n            [\n              -122.28607177734376,\n              38.08647276060778\n            ],\n            [\n              -122.31903076171875,\n              38.11403028044574\n            ],\n            [\n              -122.4041748046875,\n              38.15291731872143\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2019-05-16","publicationStatus":"PW","contributors":{"authors":[{"text":"Allen, Rachel 0000-0002-0287-6466","orcid":"https://orcid.org/0000-0002-0287-6466","contributorId":216002,"corporation":false,"usgs":true,"family":"Allen","given":"Rachel","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":763625,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lacy, Jessica R. 0000-0002-2797-6172","orcid":"https://orcid.org/0000-0002-2797-6172","contributorId":201703,"corporation":false,"usgs":true,"family":"Lacy","given":"Jessica","email":"","middleInitial":"R.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":763626,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Variano, Evan A 0000-0001-5102-238X","orcid":"https://orcid.org/0000-0001-5102-238X","contributorId":216003,"corporation":false,"usgs":false,"family":"Variano","given":"Evan","email":"","middleInitial":"A","affiliations":[{"id":36942,"text":"University of California, Berkeley","active":true,"usgs":false}],"preferred":false,"id":763627,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70204492,"text":"70204492 - 2019 - Controls on sediment transport over coral reefs off southwest Puerto Rico: Seasonal patterns and Hurricane Maria","interactions":[],"lastModifiedDate":"2019-07-29T06:48:02","indexId":"70204492","displayToPublicDate":"2019-06-04T12:52:53","publicationYear":"2019","noYear":false,"publicationType":{"id":24,"text":"Conference Paper"},"publicationSubtype":{"id":19,"text":"Conference Paper"},"title":"Controls on sediment transport over coral reefs off southwest Puerto Rico: Seasonal patterns and Hurricane Maria","docAbstract":"<p><span>Guánica Bay in southwest Puerto Rico is highly turbid and has some of the highest PCB concentrations in the USA. To investigate how and to what extent the bay waters influence coral reef ecosystem health along the coastline, 6 months of hydrodynamic data were collected at 8 sites on the insular shelf. Bed shear stresses were primarily driven by waves and were weakest at the site closest to La Parguera, located downcoast to the west. Due to the prevailing westward shelf currents, suspended particulate material (SPM) exiting the bay likely settles out at these lower energy sites. We postulate the ecosystem in this area was adversely affected immediately after the hurricane because (1) the source concentration of SPM and PCBs in the bay was greatly increased, and (2) regional waves in the months after the hurricane season were less energetic and, thus, less frequently mobilized and flushed the material.</span></p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Coastal Sediments 2019 Proceedings","largerWorkSubtype":{"id":12,"text":"Conference publication"},"language":"English","publisher":"World Scientific","doi":"10.1142/9789811204487_0079","usgsCitation":"Cheriton, O., Storlazzi, C.D., Rosenberger, K.J., and Sherman, C., 2019, Controls on sediment transport over coral reefs off southwest Puerto Rico: Seasonal patterns and Hurricane Maria, <i>in</i> Coastal Sediments 2019 Proceedings, p. 903-915, https://doi.org/10.1142/9789811204487_0079.","productDescription":"13 p.","startPage":"903","endPage":"915","ipdsId":"IP-103770","costCenters":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"links":[{"id":365994,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Puerto Rico","otherGeospatial":"Guanica Bay","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -67.07599639892577,\n              17.92516935349583\n            ],\n            [\n              -66.78485870361328,\n              17.92516935349583\n            ],\n            [\n              -66.78485870361328,\n              17.997672483883054\n            ],\n            [\n              -67.07599639892577,\n              17.997672483883054\n            ],\n            [\n              -67.07599639892577,\n              17.92516935349583\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","noUsgsAuthors":false,"publicationDate":"2019-05-16","publicationStatus":"PW","contributors":{"authors":[{"text":"Cheriton, Olivia 0000-0003-3011-9136 ocheriton@usgs.gov","orcid":"https://orcid.org/0000-0003-3011-9136","contributorId":149003,"corporation":false,"usgs":true,"family":"Cheriton","given":"Olivia","email":"ocheriton@usgs.gov","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":767223,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Storlazzi, Curt D. 0000-0001-8057-4490 cstorlazzi@usgs.gov","orcid":"https://orcid.org/0000-0001-8057-4490","contributorId":140584,"corporation":false,"usgs":true,"family":"Storlazzi","given":"Curt","email":"cstorlazzi@usgs.gov","middleInitial":"D.","affiliations":[{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true},{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true}],"preferred":true,"id":767224,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rosenberger, Kurt J. 0000-0002-5185-5776 krosenberger@usgs.gov","orcid":"https://orcid.org/0000-0002-5185-5776","contributorId":140453,"corporation":false,"usgs":true,"family":"Rosenberger","given":"Kurt","email":"krosenberger@usgs.gov","middleInitial":"J.","affiliations":[{"id":186,"text":"Coastal and Marine Geology Program","active":true,"usgs":true},{"id":520,"text":"Pacific Coastal and Marine Science Center","active":true,"usgs":true}],"preferred":true,"id":767225,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sherman, Clark","contributorId":9795,"corporation":false,"usgs":true,"family":"Sherman","given":"Clark","affiliations":[],"preferred":false,"id":767226,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70203411,"text":"ofr20191055 - 2019 - Distribution of adult Chinook salmon (Oncorhynchus tshawytscha) in relation to water temperatures, Lake Scanewa, Cowlitz River, Washington, 2012","interactions":[],"lastModifiedDate":"2019-06-05T13:55:21","indexId":"ofr20191055","displayToPublicDate":"2019-06-04T12:10:14","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-1055","displayTitle":"Distribution of Adult Chinook Salmon (<em>Oncorhynchus tshawytscha</em>) in Relation to Water Temperatures, Lake Scanewa, Cowlitz River, Washington, 2012","title":"Distribution of adult Chinook salmon (Oncorhynchus tshawytscha) in relation to water temperatures, Lake Scanewa, Cowlitz River, Washington, 2012","docAbstract":"<p class=\"p1\">A trap-and-haul program is operated to move anadromous Pacific salmon (<i>Oncorhynchus </i>spp.) around dams and reservoirs in the Cowlitz River basin, Washington. The primary release site for adult fish is in Lake Scanewa, a small reservoir created by Cowlitz Falls Dam, the uppermost dam in the basin. Releases in the reservoir are terminated when reservoir water temperature is 16 degrees Celsius (°C) or greater to reduce the risk of exposing adult salmon and steelhead (<i>O. mykiss</i>) to thermal conditions known to be stressful for these species. When the water temperature limit is reached, fish are released into the Cowlitz and Cispus Rivers upstream of the reservoir. Concerns have been raised about fish presence in the reservoir during warm conditions, so an empirical evaluation of water temperatures selected by spring Chinook salmon (<i>O. tshawytscha</i>) in Lake Scanewa was requested by resource managers. We conducted the evaluation during June–October 2012. Water temperature in the reservoir was measured using a series of thermographs combined with daily measurements at the Cowlitz Falls Fish Facility. Temperature-use data were collected from 50 adult hatchery-origin spring Chinook salmon tagged with temperature-sensing radio transmitters and released into the reservoir. This approach yielded a total of 930,056 individual temperature-use records in the reservoir during the study. Tagged fish occupied water temperatures less than 16 °C during most of the study period. Water temperatures ranged from 5 to 18.5 °C during the study, peaking in mid-August. Overall, about 25 percent of the detections of tagged fish were in water temperatures in the 16–20 °C range. In August, tagged fish detections in the 18–20 °C range comprised 13 percent of the total detections, and the remainder of the detections were in water less than or equal to 17 °C. Results from the study indicate that adult hatchery-origin spring Chinook salmon were able to locate and use water temperatures in the reservoir less than levels associated with stress. However, we also observed that thermal conditions in the reservoir were cool relative to most other years during 2008–16. Additional research may be warranted to better understand thermal exposure of adult spring Chinook salmon during warmer years.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20191055","collaboration":"Prepared in cooperation with Public Utility District Number 1 of Lewis County, Washington","usgsCitation":"Kock, T.J., Ekstrom, B.K., and Liedtke, T.L., 2018, Distribution of adult Chinook salmon (Oncorhynchus tshawytscha) in relation to water temperatures, Lake Scanewa, Cowlitz River, Washington, 2012: U.S. Geological Survey Open-File Report 2019-1055, 14 p., https://doi.org/10.3133/ofr20191055.","productDescription":"iv, 14 p.","numberOfPages":"22","onlineOnly":"Y","ipdsId":"IP-106983","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":364309,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2019/1055/coverthb2.jpg"},{"id":364310,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2019/1055/ofr20191055.pdf","text":"Report","size":"1.7 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2019-1055"}],"country":"United States","state":"Washington","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"MultiPolygon\",\"coordinates\":[[[[-122.519535,48.288314],[-122.551793,48.281512],[-122.584086,48.297987],[-122.618466,48.294159],[-122.626757,48.288991],[-122.620748,48.282961],[-122.623779,48.269431],[-122.652639,48.265081],[-122.66921,48.240614],[-122.668385,48.223967],[-122.628352,48.222467],[-122.606406,48.208262],[-122.588138,48.18594],[-122.558205,48.119579],[-122.571853,48.102143],[-122.54512,48.05255],[-122.513994,48.059077],[-122.511081,48.075301],[-122.525422,48.096537],[-122.513276,48.097538],[-122.491104,48.094242],[-122.431266,48.045001],[-122.376259,48.034457],[-122.373263,48.000791],[-122.353611,47.981433],[-122.349597,47.958796],[-122.358812,47.93742],[-122.376837,47.923703],[-122.380497,47.904023],[-122.397349,47.912401],[-122.431035,47.914732],[-122.445519,47.930226],[-122.44076,47.951845],[-122.446682,47.963155],[-122.47266,47.988449],[-122.501257,47.987089],[-122.521219,47.972997],[-122.546824,47.967215],[-122.552053,47.973644],[-122.542924,47.996404],[-122.58178,48.010386],[-122.607342,48.030992],[-122.593621,48.0472],[-122.594922,48.056318],[-122.614028,48.072788],[-122.598301,48.110616],[-122.609568,48.15186],[-122.633167,48.163281],[-122.677337,48.154587],[-122.693084,48.181509],[-122.763042,48.215342],[-122.770045,48.224395],[-122.752563,48.260061],[-122.732022,48.279425],[-122.72259,48.304268],[-122.673731,48.354683],[-122.664928,48.374823],[-122.664659,48.401508],[-122.634991,48.404244],[-122.63582,48.395128],[-122.609715,48.411565],[-122.60198,48.409907],[-122.595351,48.3972],[-122.585038,48.395166],[-122.585162,48.353304],[-122.551334,48.342138],[-122.506568,48.310041],[-122.505828,48.297677],[-122.519535,48.288314]]],[[[-122.474684,47.511068],[-122.452399,47.503471],[-122.460027,47.48686],[-122.433385,47.46643],[-122.439415,47.458633],[-122.437656,47.407424],[-122.395054,47.399277],[-122.373628,47.388718],[-122.437809,47.365606],[-122.453997,47.343337],[-122.469702,47.344623],[-122.493122,47.330253],[-122.51885,47.33332],[-122.528128,47.345542],[-122.517797,47.368678],[-122.526733,47.398581],[-122.514703,47.414048],[-122.513328,47.449106],[-122.497862,47.475915],[-122.482739,47.483133],[-122.474684,47.511068]]],[[[-122.695907,48.737273],[-122.663259,48.697077],[-122.644901,48.691389],[-122.618225,48.670721],[-122.609576,48.645018],[-122.635299,48.651846],[-122.673538,48.680809],[-122.691795,48.711498],[-122.718833,48.716818],[-122.722262,48.731624],[-122.715709,48.748672],[-122.695907,48.737273]]],[[[-123.035393,49.002154],[-123.021459,48.977299],[-123.028091,48.973943],[-123.083834,48.976139],[-123.090546,49.001976],[-123.035393,49.002154]]],[[[-122.800217,48.60169],[-122.804869,48.595932],[-122.801096,48.585425],[-122.770349,48.558106],[-122.788503,48.530393],[-122.787347,48.523012],[-122.777467,48.517799],[-122.779124,48.508911],[-122.817912,48.483888],[-122.81973,48.458843],[-122.803521,48.428748],[-122.812208,48.422326],[-122.874135,48.418196],[-122.893646,48.422655],[-122.889016,48.435947],[-122.913888,48.443231],[-122.928004,48.439966],[-122.91646,48.453263],[-122.926901,48.460874],[-122.962009,48.451161],[-123.039156,48.460003],[-123.067675,48.479497],[-123.119451,48.492576],[-123.141478,48.505291],[-123.163234,48.529544],[-123.16147,48.547618],[-123.176266,48.562131],[-123.173061,48.579086],[-123.184941,48.58697],[-123.197754,48.586216],[-123.203026,48.596178],[-123.178425,48.622115],[-123.107362,48.622451],[-123.098462,48.612834],[-123.101552,48.59782],[-123.074611,48.591816],[-123.048403,48.569216],[-123.015046,48.560821],[-122.987296,48.561895],[-122.98611,48.569984],[-122.995026,48.578162],[-123.016647,48.580244],[-123.034101,48.591767],[-123.023433,48.599477],[-123.04653,48.61149],[-123.048652,48.621002],[-123.023495,48.634001],[-123.009924,48.655064],[-122.949116,48.693398],[-122.942367,48.706723],[-122.894599,48.71503],[-122.833124,48.698173],[-122.800267,48.67962],[-122.743049,48.661991],[-122.755031,48.649512],[-122.792147,48.633502],[-122.809622,48.619035],[-122.800217,48.60169]]],[[[-123.197953,48.68466],[-123.186076,48.684917],[-123.14799,48.668001],[-123.106165,48.633473],[-123.134956,48.63724],[-123.215917,48.669352],[-123.237148,48.683466],[-123.236567,48.68895],[-123.212892,48.689713],[-123.197953,48.68466]]],[[[-123.025486,48.717966],[-123.007511,48.718863],[-123.005086,48.694342],[-123.021215,48.681416],[-123.042337,48.675663],[-123.03636,48.69008],[-123.070427,48.699971],[-123.040179,48.717296],[-123.025486,48.717966]]],[[[-122.649405,48.588457],[-122.610841,48.561146],[-122.578856,48.54813],[-122.572967,48.529028],[-122.599948,48.536904],[-122.635738,48.526021],[-122.649256,48.528769],[-122.654342,48.537956],[-122.649405,48.588457]]],[[[-122.714512,48.60878],[-122.694672,48.596602],[-122.670638,48.568812],[-122.68944,48.543903],[-122.722407,48.540606],[-122.73048,48.565602],[-122.73944,48.573893],[-122.739898,48.583949],[-122.714512,48.60878]]],[[[-122.699266,48.621115],[-122.674173,48.629944],[-122.657016,48.609891],[-122.676796,48.610055],[-122.699266,48.621115]]],[[[-122.334524,48.018916],[-122.321721,48.019977],[-122.303455,48.005603],[-122.326115,48.010295],[-122.334524,48.018916]]],[[[-122.418268,47.320614],[-122.324833,47.348521],[-122.328434,47.400621],[-122.348035,47.415921],[-122.355135,47.441921],[-122.383136,47.450521],[-122.368036,47.459221],[-122.361336,47.481421],[-122.396538,47.51522],[-122.398338,47.55012],[-122.421139,47.57602],[-122.387139,47.59572],[-122.370167,47.583087],[-122.342937,47.59122],[-122.339513,47.599113],[-122.344937,47.60912],[-122.367819,47.624213],[-122.414645,47.639766],[-122.429841,47.658919],[-122.393248,47.701602],[-122.38044,47.709119],[-122.37314,47.729219],[-122.382641,47.749119],[-122.380241,47.758519],[-122.396422,47.777927],[-122.394944,47.803318],[-122.33595,47.852306],[-122.328546,47.897917],[-122.311927,47.923703],[-122.307048,47.949117],[-122.249007,47.959507],[-122.230046,47.970917],[-122.226346,47.976417],[-122.232391,47.987713],[-122.224979,48.016626],[-122.231761,48.029876],[-122.281087,48.049793],[-122.326119,48.092877],[-122.343241,48.097631],[-122.363842,48.12393],[-122.370253,48.164809],[-122.362044,48.187568],[-122.372492,48.193022],[-122.395499,48.228551],[-122.433767,48.23655],[-122.449605,48.232598],[-122.45371,48.228859],[-122.449513,48.214736],[-122.441731,48.211776],[-122.45493,48.196639],[-122.478535,48.188087],[-122.479008,48.175703],[-122.442383,48.130841],[-122.379481,48.087384],[-122.358375,48.056133],[-122.377114,48.057568],[-122.400692,48.085255],[-122.4675,48.130353],[-122.489986,48.120617],[-122.512031,48.133931],[-122.53722,48.183745],[-122.538916,48.209683],[-122.530996,48.249821],[-122.503786,48.257045],[-122.480925,48.251706],[-122.463962,48.270541],[-122.406516,48.25183],[-122.395328,48.257187],[-122.392058,48.269628],[-122.371693,48.287839],[-122.408718,48.326413],[-122.442678,48.337934],[-122.475529,48.359912],[-122.507437,48.364666],[-122.533452,48.383409],[-122.539449,48.39719],[-122.554536,48.40604],[-122.558403,48.426758],[-122.551221,48.439465],[-122.557298,48.444438],[-122.575254,48.443333],[-122.581607,48.429244],[-122.61448,48.41488],[-122.649839,48.408526],[-122.674158,48.424726],[-122.678928,48.439466],[-122.654844,48.454087],[-122.657753,48.47294],[-122.664623,48.478128],[-122.689121,48.476849],[-122.700603,48.457632],[-122.712322,48.464143],[-122.712981,48.47879],[-122.701644,48.497622],[-122.684521,48.509123],[-122.671386,48.50398],[-122.606961,48.522152],[-122.599951,48.520946],[-122.598469,48.512169],[-122.568071,48.50821],[-122.537355,48.466749],[-122.500721,48.460887],[-122.471832,48.470724],[-122.46967,48.474975],[-122.483501,48.49243],[-122.485288,48.528106],[-122.498463,48.556206],[-122.504428,48.564775],[-122.531978,48.568644],[-122.534719,48.574246],[-122.495904,48.575927],[-122.478431,48.559303],[-122.44456,48.570115],[-122.425271,48.599522],[-122.448702,48.622624],[-122.46425,48.625717],[-122.500308,48.656163],[-122.519172,48.713095],[-122.495301,48.737328],[-122.490401,48.751128],[-122.510902,48.757728],[-122.535803,48.776128],[-122.567498,48.779185],[-122.596844,48.771492],[-122.637146,48.735708],[-122.626287,48.72093],[-122.612562,48.714932],[-122.605733,48.701066],[-122.615169,48.693839],[-122.630422,48.696625],[-122.673472,48.733082],[-122.647443,48.773998],[-122.646777,48.785011],[-122.693683,48.804475],[-122.699303,48.789063],[-122.709815,48.786205],[-122.709169,48.817829],[-122.717073,48.84719],[-122.793175,48.892927],[-122.751289,48.911239],[-122.746596,48.930731],[-122.766096,48.941955],[-122.787539,48.931702],[-122.821631,48.941369],[-122.817226,48.95597],[-122.774276,48.991038],[-122.756318,48.996881],[-122.75802,49.002357],[-121.751252,48.997399],[-117.032351,48.999188],[-117.042623,47.761223],[-117.039813,46.425425],[-117.034696,46.418318],[-117.046915,46.379577],[-117.062785,46.365287],[-117.062748,46.353624],[-117.055983,46.345531],[-117.023844,46.335976],[-117.020663,46.314793],[-116.986688,46.296662],[-116.991134,46.276342],[-116.966742,46.256923],[-116.955264,46.23088],[-116.965841,46.203417],[-116.92187,46.167808],[-116.950276,46.123464],[-116.955263,46.102237],[-116.976957,46.09667],[-116.982479,46.089389],[-116.978938,46.080007],[-116.957372,46.075449],[-116.942656,46.061],[-116.91718,45.996575],[-118.987129,45.999855],[-119.027056,45.969134],[-119.12612,45.932859],[-119.19553,45.92787],[-119.25715,45.939926],[-119.322509,45.933183],[-119.364396,45.921605],[-119.450256,45.917354],[-119.487829,45.906307],[-119.524632,45.908605],[-119.571584,45.925456],[-119.600549,45.919581],[-119.623393,45.905639],[-119.669877,45.856867],[-119.772927,45.845578],[-119.802655,45.84753],[-119.907461,45.828135],[-119.965744,45.824365],[-120.07015,45.785152],[-120.141352,45.773152],[-120.170453,45.761951],[-120.210754,45.725951],[-120.282156,45.72125],[-120.40396,45.699249],[-120.482362,45.694449],[-120.505863,45.700048],[-120.559465,45.738348],[-120.591166,45.746547],[-120.634968,45.745847],[-120.68937,45.715847],[-120.855674,45.671545],[-120.895575,45.642945],[-120.913476,45.640045],[-120.943977,45.656445],[-120.983478,45.648344],[-121.06437,45.652549],[-121.084933,45.647893],[-121.120064,45.623134],[-121.117052,45.618117],[-121.145534,45.607886],[-121.183841,45.606441],[-121.196556,45.616689],[-121.200367,45.649829],[-121.215779,45.671238],[-121.33777,45.704949],[-121.372574,45.703111],[-121.401739,45.692887],[-121.423592,45.69399],[-121.462849,45.701367],[-121.499153,45.720846],[-121.533106,45.726541],[-121.631167,45.704657],[-121.668362,45.705082],[-121.707358,45.694809],[-121.735104,45.694039],[-121.811304,45.706761],[-121.867167,45.693277],[-121.901855,45.670716],[-121.900858,45.662009],[-121.908267,45.654399],[-121.935149,45.644169],[-121.955734,45.643559],[-121.963547,45.632784],[-121.983038,45.622812],[-122.044374,45.609516],[-122.101675,45.583516],[-122.183695,45.577696],[-122.2017,45.564141],[-122.266701,45.543841],[-122.331502,45.548241],[-122.352802,45.569441],[-122.380302,45.575941],[-122.438674,45.563585],[-122.548149,45.596768],[-122.675008,45.618039],[-122.76381,45.657138],[-122.774511,45.680437],[-122.760108,45.734413],[-122.761451,45.759163],[-122.769532,45.780583],[-122.795605,45.81],[-122.785026,45.867699],[-122.81151,45.912725],[-122.806193,45.932416],[-122.813998,45.960984],[-122.837638,45.98082],[-122.856158,46.014469],[-122.878092,46.031281],[-122.884478,46.06028],[-122.904119,46.083734],[-122.962681,46.104817],[-123.004233,46.133823],[-123.041297,46.146351],[-123.115904,46.185268],[-123.166414,46.188973],[-123.280166,46.144843],[-123.371433,46.146372],[-123.430847,46.181827],[-123.427629,46.229348],[-123.474844,46.267831],[-123.501245,46.271004],[-123.547659,46.259109],[-123.547636,46.265595],[-123.613544,46.259988],[-123.669501,46.266832],[-123.679125,46.272502],[-123.680574,46.296025],[-123.700764,46.305278],[-123.724273,46.301161],[-123.727913,46.289661],[-123.741478,46.290274],[-123.766682,46.273499],[-123.806139,46.283588],[-123.875525,46.239787],[-123.919581,46.251217],[-123.954353,46.277001],[-123.974509,46.303063],[-124.001264,46.31326],[-124.020551,46.315737],[-124.029924,46.308312],[-124.044018,46.275925],[-124.060961,46.278761],[-124.080671,46.267239],[-124.064624,46.326899],[-124.057425,46.409315],[-124.057024,46.493338],[-124.068655,46.634879],[-124.062715,46.642582],[-124.048444,46.645827],[-124.035874,46.630822],[-124.052708,46.622796],[-124.050842,46.617421],[-124.023566,46.582559],[-124.031737,46.496375],[-124.026032,46.462978],[-123.990615,46.463019],[-123.99268,46.488617],[-123.983688,46.498542],[-123.968044,46.473497],[-123.943667,46.477197],[-123.921192,46.507731],[-123.896703,46.522665],[-123.894254,46.537028],[-123.920247,46.567343],[-123.928861,46.588875],[-123.955556,46.60357],[-123.960642,46.636364],[-123.921913,46.650262],[-123.923269,46.672708],[-123.851356,46.70256],[-123.84621,46.716795],[-123.87668,46.730657],[-123.898641,46.750205],[-123.916371,46.741322],[-123.91285,46.730647],[-123.916874,46.726739],[-123.948683,46.725369],[-123.968564,46.736106],[-123.974994,46.733391],[-123.979655,46.724658],[-123.966886,46.705184],[-123.994242,46.707929],[-124.003458,46.702337],[-124.063117,46.733664],[-124.092176,46.741624],[-124.108078,46.836388],[-124.138225,46.905534],[-124.110641,46.91252],[-124.093392,46.901168],[-124.089286,46.867716],[-124.073113,46.861493],[-124.055085,46.870429],[-124.046344,46.893972],[-124.01366,46.90363],[-123.985082,46.921916],[-123.957493,46.921261],[-123.86018,46.948556],[-123.898245,46.971927],[-123.939214,46.969739],[-123.959185,46.981759],[-124.012218,46.985176],[-124.019727,46.991189],[-124.005248,47.003915],[-124.017035,47.011717],[-124.026345,47.030187],[-124.065856,47.04114],[-124.122057,47.04165],[-124.141517,47.035142],[-124.151288,47.021112],[-124.138035,46.970959],[-124.124386,46.94387],[-124.180111,46.926357],[-124.169113,46.994508],[-124.182802,47.134041],[-124.236349,47.287287],[-124.25359,47.30248],[-124.271193,47.305025],[-124.299943,47.34836],[-124.319379,47.355559],[-124.336724,47.415996],[-124.355955,47.545698],[-124.382215,47.632302],[-124.412106,47.691199],[-124.425195,47.738434],[-124.453927,47.765334],[-124.47657,47.769671],[-124.489737,47.816988],[-124.539927,47.836967],[-124.562363,47.866216],[-124.625512,47.887963],[-124.645442,47.935338],[-124.672427,47.964414],[-124.67083,47.982366],[-124.682157,48.035987],[-124.696542,48.069274],[-124.695114,48.087096],[-124.687101,48.098657],[-124.733174,48.163393],[-124.731746,48.169997],[-124.704153,48.184422],[-124.696111,48.198599],[-124.690389,48.219745],[-124.705031,48.238774],[-124.684677,48.255228],[-124.676319,48.295143],[-124.665908,48.299324],[-124.65894,48.331057],[-124.670072,48.341341],[-124.696703,48.349748],[-124.727022,48.371101],[-124.731828,48.381157],[-124.716947,48.389776],[-124.653243,48.390691],[-124.631108,48.376522],[-124.599278,48.381035],[-124.395593,48.288772],[-124.361351,48.287582],[-124.272017,48.25441],[-124.250882,48.264773],[-124.238582,48.262471],[-124.101773,48.216883],[-124.107215,48.200082],[-124.050734,48.177747],[-123.981032,48.164761],[-123.880068,48.160621],[-123.858821,48.154273],[-123.778122,48.155466],[-123.728736,48.1628],[-123.71835,48.158713],[-123.702743,48.166783],[-123.651408,48.156952],[-123.628819,48.139279],[-123.590839,48.134949],[-123.551131,48.151382],[-123.507235,48.131807],[-123.440128,48.142014],[-123.441972,48.124259],[-123.424668,48.118065],[-123.332699,48.11297],[-123.288265,48.121036],[-123.239129,48.118217],[-123.21719,48.127203],[-123.1644,48.165894],[-123.133445,48.177276],[-123.143229,48.156633],[-123.116479,48.150208],[-123.085154,48.127137],[-123.06621,48.120469],[-123.038727,48.081138],[-122.979413,48.09594],[-122.929095,48.096244],[-122.917942,48.091535],[-122.927975,48.06665],[-122.918602,48.058238],[-122.877641,48.047025],[-122.849273,48.053808],[-122.857727,48.065774],[-122.878255,48.076072],[-122.882013,48.100779],[-122.876282,48.110877],[-122.833173,48.134406],[-122.760448,48.14324],[-122.748911,48.117026],[-122.778466,48.106135],[-122.801399,48.087561],[-122.766648,48.04429],[-122.74229,48.049324],[-122.739271,48.069153],[-122.747389,48.070795],[-122.733257,48.091232],[-122.698465,48.103102],[-122.68724,48.101662],[-122.69222,48.087081],[-122.682264,48.042723],[-122.668942,48.032026],[-122.669868,48.017217],[-122.686898,48.008305],[-122.70184,48.016106],[-122.723374,48.008095],[-122.718082,47.987739],[-122.701294,47.972979],[-122.6788,47.96793],[-122.676215,47.958743],[-122.68445,47.939593],[-122.657722,47.931156],[-122.651063,47.920985],[-122.655085,47.905058],[-122.646494,47.894771],[-122.610341,47.887343],[-122.631857,47.874815],[-122.63636,47.866186],[-122.69376,47.868002],[-122.681602,47.850405],[-122.683742,47.838773],[-122.748061,47.800546],[-122.758498,47.746036],[-122.781682,47.70392],[-122.811929,47.679861],[-122.832139,47.695511],[-122.790619,47.792597],[-122.812616,47.840029],[-122.820178,47.835904],[-122.815027,47.807493],[-122.845612,47.777474],[-122.880462,47.720643],[-122.896524,47.674838],[-122.97244,47.6149],[-123.106486,47.45817],[-123.15598,47.355745],[-123.140169,47.347496],[-123.111298,47.362619],[-123.120234,47.39149],[-122.967284,47.585685],[-122.917103,47.620743],[-122.856611,47.649615],[-122.804498,47.653363],[-122.754186,47.671612],[-122.740159,47.736228],[-122.722686,47.748827],[-122.714801,47.768176],[-122.690562,47.778372],[-122.682015,47.800882],[-122.623192,47.836199],[-122.608105,47.856728],[-122.573672,47.857582],[-122.573098,47.874081],[-122.588235,47.912923],[-122.620316,47.931553],[-122.617022,47.938987],[-122.603861,47.940478],[-122.592184,47.922519],[-122.549072,47.919072],[-122.527593,47.905882],[-122.513986,47.880807],[-122.506122,47.831745],[-122.482529,47.815511],[-122.485214,47.804128],[-122.495346,47.79704],[-122.495458,47.786692],[-122.471402,47.765965],[-122.470333,47.757109],[-122.471844,47.749819],[-122.488491,47.743605],[-122.554454,47.745704],[-122.543161,47.710941],[-122.53094,47.704814],[-122.511196,47.708715],[-122.504604,47.699136],[-122.518277,47.65132],[-122.493205,47.635122],[-122.500357,47.617816],[-122.49824,47.598242],[-122.493933,47.588963],[-122.479089,47.583654],[-122.518367,47.57408],[-122.543118,47.556326],[-122.546611,47.52355],[-122.52305,47.524],[-122.494882,47.510265],[-122.530514,47.469041],[-122.531889,47.428827],[-122.551136,47.394456],[-122.537044,47.375896],[-122.575985,47.32642],[-122.547521,47.285344],[-122.578211,47.254804],[-122.589454,47.227618],[-122.602541,47.217506],[-122.611464,47.2181],[-122.668571,47.270449],[-122.697378,47.283969],[-122.671256,47.343774],[-122.632463,47.376394],[-122.671486,47.366876],[-122.725738,47.33047],[-122.74525,47.297158],[-122.749621,47.276408],[-122.718124,47.250045],[-122.648941,47.214531],[-122.641802,47.205013],[-122.673925,47.174675],[-122.691771,47.141958],[-122.711997,47.127681],[-122.771619,47.167109],[-122.832799,47.243412],[-122.816633,47.276457],[-122.799025,47.289306],[-122.796646,47.341654],[-122.803688,47.355071],[-122.821868,47.363069],[-122.822344,47.319763],[-122.84586,47.298405],[-122.863732,47.270221],[-122.856171,47.233788],[-122.838298,47.208353],[-122.858735,47.167955],[-122.852046,47.164359],[-122.814238,47.179482],[-122.775056,47.123114],[-122.721437,47.103179],[-122.67813,47.103866],[-122.650634,47.132738],[-122.631987,47.140589],[-122.614855,47.169143],[-122.590829,47.178107],[-122.561957,47.244099],[-122.527586,47.291531],[-122.547747,47.316403],[-122.533338,47.31662],[-122.471652,47.277321],[-122.4442,47.266723],[-122.429605,47.269707],[-122.409199,47.288556],[-122.444635,47.300421],[-122.418268,47.320614]]]]},\"properties\":{\"name\":\"Washington\",\"nation\":\"USA  \"}}]}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/wfrc\" target=\"_blank\" rel=\"noopener\" data-mce-href=\"https://www.usgs.gov/centers/wfrc\">Western Fisheries Research Center</a><br>U.S. Geological Survey<br>6505 NE 65th Street<br>Seattle, Washington 98115-5016</p>","tableOfContents":"<ul><li>Abstract</li><li>Introduction</li><li>Methods</li><li>Results</li><li>Discussion</li><li>Acknowledgments</li><li>References</li></ul>","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"publishedDate":"2019-06-04","noUsgsAuthors":false,"publicationDate":"2019-06-04","publicationStatus":"PW","contributors":{"authors":[{"text":"Kock, Tobias J. 0000-0001-8976-0230 tkock@usgs.gov","orcid":"https://orcid.org/0000-0001-8976-0230","contributorId":3038,"corporation":false,"usgs":true,"family":"Kock","given":"Tobias","email":"tkock@usgs.gov","middleInitial":"J.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":762577,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ekstrom, Brian K. 0000-0002-1162-1780 bekstrom@usgs.gov","orcid":"https://orcid.org/0000-0002-1162-1780","contributorId":3704,"corporation":false,"usgs":true,"family":"Ekstrom","given":"Brian","email":"bekstrom@usgs.gov","middleInitial":"K.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":762578,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Liedtke, Theresa L. 0000-0001-6063-9867 tliedtke@usgs.gov","orcid":"https://orcid.org/0000-0001-6063-9867","contributorId":2999,"corporation":false,"usgs":true,"family":"Liedtke","given":"Theresa","email":"tliedtke@usgs.gov","middleInitial":"L.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":762579,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70203454,"text":"70203454 - 2019 - Problems of Large Spatial Databases","interactions":[],"lastModifiedDate":"2019-06-25T11:28:07","indexId":"70203454","displayToPublicDate":"2019-06-04T11:24:21","publicationYear":"2019","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"Problems of Large Spatial Databases","docAbstract":"<p><span>Large spatial databases often labeled as geospatial big data exceed the capacity of commonly used computing systems as a result of data volume, variety, velocity, and veracity. Additional problems also labeled with V’s are cited, but the four primary ones are the most problematic and focus of this chapter (Li et al., 2016, Panimalar et al., 2017).&nbsp; Sources include satellites, aircraft and drone platforms, vehicles, geosocial networking services, mobile devices, and cameras. The problems in processing these data to extract useful information include query, analysis, and visualization. Data mining techniques and machine learning algorithms, such as deep convolutional neural networks, often are used with geospatial big data. The obvious problem is handling the large data volumes, particularly for input and output operations, requiring parallel read and write of the data, as well as high speed computers, disk services, and network transfer speeds. Additional problems of large spatial databases include the variety and heterogeneity of data requiring advanced algorithms to handle different data types and characteristics, and integration with other data. The velocity at which the data are acquired is a challenge, especially using today’s advanced sensors and the Internet of Things that includes millions of devices creating data on short temporal scales of micro seconds to minutes. Finally, the veracity, or truthfulness of large spatial databases is difficult to establish and validate, particularly for all data elements in the database.</span></p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Geographic Information Science & Technology Body of Knowledge","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"UCGIS","doi":"10.22224/gistbok/2019.2.13","usgsCitation":"Usery, E., 2019, Problems of Large Spatial Databases, chap. <i>of</i> Geographic Information Science & Technology Body of Knowledge, https://doi.org/10.22224/gistbok/2019.2.13.","onlineOnly":"Y","ipdsId":"IP-101554","costCenters":[{"id":423,"text":"National Geospatial Program","active":true,"usgs":true},{"id":5074,"text":"Center for Geospatial Information Science (CEGIS)","active":true,"usgs":true}],"links":[{"id":460367,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.22224/gistbok/2019.2.13","text":"Publisher Index Page"},{"id":365010,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2019-04-01","publicationStatus":"PW","contributors":{"authors":[{"text":"Usery, E. Lynn 0000-0002-2766-2173","orcid":"https://orcid.org/0000-0002-2766-2173","contributorId":204684,"corporation":false,"usgs":true,"family":"Usery","given":"E. Lynn","affiliations":[{"id":5074,"text":"Center for Geospatial Information Science (CEGIS)","active":true,"usgs":true},{"id":423,"text":"National Geospatial Program","active":true,"usgs":true}],"preferred":true,"id":762758,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70203209,"text":"fs20193026 - 2019 - Geological and geophysical data for a three-dimensional view—Inside the San Juan and Silverton Calderas, Southern Rocky Mountains Volcanic Field, Silverton, Colorado","interactions":[],"lastModifiedDate":"2019-06-05T14:01:16","indexId":"fs20193026","displayToPublicDate":"2019-06-04T11:10:00","publicationYear":"2019","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2019-3026","title":"Geological and geophysical data for a three-dimensional view—Inside the San Juan and Silverton Calderas, Southern Rocky Mountains Volcanic Field, Silverton, Colorado","docAbstract":"<h1>Introduction</h1><p>The San Juan-Silverton caldera complex located near Silverton, Colorado, in the Southern Rocky Mountains volcanic field is an ideal natural laboratory for furthering the understanding of shallow-to-deep volcanic-related mineral systems. Recent advances in geophysical data processing and three-dimensional (3D) model construction will help to characterize shallow properties important for understanding surface water and groundwater quality issues and will also improve knowledge of deep geological structures that may have been conduits for hydrothermal fluids that formed mineral deposits. The study has general applications to mineral resource assessments in other areas of the world and to identifying possible groundwater flow paths and associated geochemistry important in abandoned mine lands cleanup.</p><p>Silverton, Colorado, is the site of a spectacular succession of igneous rocks that formed beginning about 35 million years ago (Ma). Base metals (copper, lead, and zinc) and precious metals (silver and gold) mined from the late 1870s to 1991 owe their existence to a 25-million-year cycle of igneous activity. The presence of economic, base, and precious metal deposits within a complex geological setting were largely responsible for stimulating studies by the U.S. Geological Survey (USGS) conducted during the early 20th century. The focus of investigations in the late 20th and 21st centuries have broadened in scope to include abandoned mine lands (AML) investigations. The legacy of hard rock mining in headwater catchment areas caused environmental challenges for local communities and downstream water resource users. The Gold King Mine, located a few kilometers north of Silverton, illustrates the potential environmental effects of abandoned mines. On August 5, 2015, during reclamation efforts at the Gold King Mine, a breach of collapsed workings sent approximately 3 million gallons of acidic and metal-rich mine water into the upper Animas River, a tributary to the Colorado River Basin. Mining-related sources of metals and acidity add to geological sources of metals in surface water and groundwater. Weathering processes of altered and mineralized rock have been a source of acid rock drainage that have been ongoing for millennia.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston VA","doi":"10.3133/fs20193026","collaboration":"Prepared in collaboration with U.S. Forest Service, Bureau of Land Management, U.S. Environmental Protection Agency, Colorado Division of Reclamation Mining and Safety, Colorado Department of Public Health and Environment, and Animas River Stakeholders Group","usgsCitation":"Yager, D.B., Anderson, E.D., Rodriguez, B.D., Deszcz-Pan, M., and Smith, B.D., 2019, Geological and geophysical data for a three-dimensional view—Inside the San Juan and Silverton calderas, Southern Rocky Mountains volcanic field, Silverton, Colorado:  U.S. Geological Survey Fact Sheet 2019-3026, 4 p., https://doi.org/10.3133/fs20193026.","productDescription":"4 p.","onlineOnly":"N","ipdsId":"IP-103569","costCenters":[{"id":35995,"text":"Geology, Geophysics, and Geochemistry Science Center","active":true,"usgs":true}],"links":[{"id":364304,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2019/3026/coverthb.jpg"},{"id":364305,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2019/3026/fs20193026.pdf","text":"Report","size":"8.83 MB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2019-3026"}],"country":"United States","state":"Colorado","county":"San Juan County","geographicExtents":"{\"type\":\"FeatureCollection\",\"features\":[{\"type\":\"Feature\",\"geometry\":{\"type\":\"Polygon\",\"coordinates\":[[[-107.5857,37.9702],[-107.5786,37.9667],[-107.5721,37.9636],[-107.5632,37.9573],[-107.5584,37.9524],[-107.5549,37.9493],[-107.5502,37.9475],[-107.5361,37.9445],[-107.5319,37.9414],[-107.5324,37.9378],[-107.5347,37.9337],[-107.5352,37.9291],[-107.5351,37.9237],[-107.532,37.9178],[-107.5278,37.9088],[-107.5247,37.9039],[-107.5212,37.9007],[-107.5211,37.8967],[-107.5279,37.8875],[-107.5324,37.8806],[-107.5329,37.8748],[-107.5317,37.8734],[-107.5305,37.8716],[-107.5204,37.8618],[-107.5179,37.8554],[-107.5184,37.8486],[-107.5176,37.84],[-107.5146,37.8342],[-107.5127,37.8288],[-107.5121,37.8265],[-107.5109,37.8256],[-107.5068,37.8243],[-107.491,37.8236],[-107.4828,37.8223],[-107.4757,37.817],[-107.4705,37.8143],[-107.4669,37.8107],[-107.4627,37.8044],[-107.4578,37.7918],[-107.457,37.785],[-107.4581,37.7791],[-107.4666,37.7668],[-107.4677,37.7645],[-107.4695,37.7645],[-107.4777,37.768],[-107.4812,37.7684],[-107.4829,37.7675],[-107.484,37.7648],[-107.4824,37.7407],[-107.4832,37.6374],[-107.6698,37.6372],[-107.6849,37.6375],[-107.6867,37.6375],[-107.9686,37.6377],[-107.9628,37.6401],[-107.96,37.6415],[-107.9583,37.6429],[-107.9572,37.6456],[-107.9572,37.6479],[-107.9579,37.6524],[-107.9604,37.6592],[-107.9629,37.6646],[-107.966,37.6718],[-107.9685,37.6777],[-107.9698,37.6822],[-107.9699,37.6867],[-107.9688,37.6899],[-107.966,37.6936],[-107.9615,37.6977],[-107.9575,37.7005],[-107.9534,37.7024],[-107.9505,37.7029],[-107.9471,37.7029],[-107.9389,37.7017],[-107.936,37.7017],[-107.9331,37.7027],[-107.9274,37.706],[-107.9239,37.7074],[-107.9181,37.7079],[-107.9135,37.7098],[-107.9094,37.7112],[-107.9049,37.7154],[-107.9014,37.7168],[-107.8968,37.7173],[-107.8904,37.717],[-107.8817,37.7162],[-107.8764,37.7163],[-107.8747,37.7172],[-107.873,37.7213],[-107.8726,37.7259],[-107.8733,37.7317],[-107.8717,37.7368],[-107.8684,37.7431],[-107.8644,37.7477],[-107.8627,37.7509],[-107.8622,37.7537],[-107.8629,37.7559],[-107.8641,37.7582],[-107.8659,37.76],[-107.8677,37.7617],[-107.8683,37.7635],[-107.8672,37.7663],[-107.8615,37.7732],[-107.8592,37.7737],[-107.854,37.7742],[-107.8493,37.7734],[-107.8446,37.7721],[-107.8423,37.7721],[-107.84,37.7726],[-107.8354,37.7767],[-107.8275,37.7859],[-107.8224,37.7915],[-107.8213,37.7928],[-107.8225,37.7955],[-107.8268,37.8063],[-107.8263,37.8082],[-107.8258,37.81],[-107.8085,37.8207],[-107.8056,37.8212],[-107.8004,37.8212],[-107.7975,37.8213],[-107.7952,37.8222],[-107.7935,37.8236],[-107.7918,37.8277],[-107.7885,37.8332],[-107.7868,37.8355],[-107.7845,37.8378],[-107.7812,37.8451],[-107.7762,37.8556],[-107.7756,37.857],[-107.7768,37.8592],[-107.7781,37.8615],[-107.7741,37.8656],[-107.7655,37.8739],[-107.7553,37.8845],[-107.7479,37.8923],[-107.7422,37.8982],[-107.7359,37.9038],[-107.7188,37.8977],[-107.7077,37.8955],[-107.7024,37.892],[-107.6977,37.8912],[-107.6942,37.8917],[-107.6897,37.8967],[-107.6879,37.8976],[-107.6862,37.899],[-107.6839,37.9],[-107.681,37.9],[-107.6682,37.9011],[-107.6595,37.9039],[-107.6514,37.9081],[-107.6422,37.9146],[-107.6394,37.9187],[-107.6389,37.9237],[-107.6404,37.9368],[-107.6405,37.9404],[-107.6407,37.9491],[-107.6385,37.9545],[-107.635,37.9586],[-107.6263,37.9588],[-107.6216,37.9588],[-107.6077,37.9636],[-107.5961,37.9669],[-107.588,37.9688],[-107.5857,37.9702]]]},\"properties\":{\"name\":\"San Juan\",\"state\":\"CO\"}}]}","contact":"<p>Director, <a href=\"https://www.usgs.gov/centers/gggsc/\" data-mce-href=\"https://www.usgs.gov/centers/gggsc/\">Geology, Geophysics, and Geochemistry Science Center</a><br>U.S. Geological Survey<br>Box 25046, MS-964<br>Denver, CO 80225-0046</p>","tableOfContents":"<ul><li>Introduction</li><li>What is a Caldera?</li><li>Data For Developing a 3D Model</li><li>Electromagnetic Data</li><li>Magnetotelluric Data</li><li>Summary</li><li>References</li></ul>","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"publishedDate":"2019-06-04","noUsgsAuthors":false,"publicationDate":"2019-06-04","publicationStatus":"PW","contributors":{"authors":[{"text":"Yager, Douglas B. 0000-0001-5074-4022 dyager@usgs.gov","orcid":"https://orcid.org/0000-0001-5074-4022","contributorId":798,"corporation":false,"usgs":true,"family":"Yager","given":"Douglas","email":"dyager@usgs.gov","middleInitial":"B.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":763614,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Anderson, Eric D. 0000-0002-0138-6166 ericanderson@usgs.gov","orcid":"https://orcid.org/0000-0002-0138-6166","contributorId":1733,"corporation":false,"usgs":true,"family":"Anderson","given":"Eric","email":"ericanderson@usgs.gov","middleInitial":"D.","affiliations":[{"id":35995,"text":"Geology, Geophysics, and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":763611,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Deszcz-Pan, Maria 0000-0002-6298-5314","orcid":"https://orcid.org/0000-0002-6298-5314","contributorId":201859,"corporation":false,"usgs":true,"family":"Deszcz-Pan","given":"Maria","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":false,"id":761672,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Rodriguez, Brian D. 0000-0002-2263-611X brod@usgs.gov","orcid":"https://orcid.org/0000-0002-2263-611X","contributorId":836,"corporation":false,"usgs":true,"family":"Rodriguez","given":"Brian","email":"brod@usgs.gov","middleInitial":"D.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":761671,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Smith, Bruce D. 0000-0002-1643-2997 bsmith@usgs.gov","orcid":"https://orcid.org/0000-0002-1643-2997","contributorId":845,"corporation":false,"usgs":true,"family":"Smith","given":"Bruce","email":"bsmith@usgs.gov","middleInitial":"D.","affiliations":[{"id":211,"text":"Crustal Geophysics and Geochemistry Science Center","active":true,"usgs":true}],"preferred":true,"id":763612,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70228131,"text":"70228131 - 2019 - Bringing Bayesian models to life","interactions":[],"lastModifiedDate":"2022-02-04T17:04:35.569812","indexId":"70228131","displayToPublicDate":"2019-06-04T11:03:54","publicationYear":"2019","noYear":false,"publicationType":{"id":4,"text":"Book"},"publicationSubtype":{"id":15,"text":"Monograph"},"title":"Bringing Bayesian models to life","docAbstract":"<p><i>Bringing Bayesian Models to Life</i><span>&nbsp;empowers the reader to extend, enhance, and implement statistical models for ecological and environmental data analysis. We open the black box and show the reader how to connect modern statistical models to computer algorithms. These algorithms allow the user to fit models that answer their scientific questions without needing to rely on automated Bayesian software. We show how to handcraft statistical models that are useful in ecological and environmental science including: linear and generalized linear models, spatial and time series models, occupancy and capture-recapture models, animal movement models, spatio-temporal models, and integrated population-models.</span></p>","language":"English","publisher":"Taylor & Francis","doi":"10.1201/9780429243653","usgsCitation":"Hooten, M., and Hefley, T.J., 2019, Bringing Bayesian models to life, 590 p., https://doi.org/10.1201/9780429243653.","productDescription":"590 p.","ipdsId":"IP-103401","costCenters":[{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"links":[{"id":395444,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"noUsgsAuthors":false,"publicationDate":"2019-05-15","publicationStatus":"PW","contributors":{"authors":[{"text":"Hooten, Mevin 0000-0002-1614-723X mhooten@usgs.gov","orcid":"https://orcid.org/0000-0002-1614-723X","contributorId":2958,"corporation":false,"usgs":true,"family":"Hooten","given":"Mevin","email":"mhooten@usgs.gov","affiliations":[{"id":12963,"text":"Colorado Cooperative Fish and Wildlife Research Unit, Fort Collins, CO","active":true,"usgs":false},{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":833185,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hefley, Trevor J.","contributorId":147146,"corporation":false,"usgs":false,"family":"Hefley","given":"Trevor","email":"","middleInitial":"J.","affiliations":[{"id":16796,"text":"Dept Fish, Wildlife & Cons Biol, Colorado St Univ, Fort Collins, CO","active":true,"usgs":false}],"preferred":false,"id":833186,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70203794,"text":"70203794 - 2019 - Contemporary human impacts on alpine ecosystems: the direct and indirect effects of human-induced climate change and land use","interactions":[],"lastModifiedDate":"2019-06-13T08:58:02","indexId":"70203794","displayToPublicDate":"2019-06-04T08:57:07","publicationYear":"2019","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"Contemporary human impacts on alpine ecosystems: the direct and indirect effects of human-induced climate change and land use","docAbstract":"Alpine ecosystems account for ca. 3 % of terrestrial habitats yet, along with adjacent mountain systems, provide water resources to nearly half of the world’s human population. Approximately 20 % of humans live in or near mountain areas, making it inherently important to understand current impacts on these systems. Here, I review literature regarding current and projected human impacts on alpine ecosystems, including the direct and indirect impacts of human-induced climate change on alpine plant, animal, and soil communities. I also discuss the influence of recreation and tourism, grazing, and other land use changes including the introduction of non-native and invasive species in alpine systems. I conclude with management implications as well as future areas of research needed to better understand changes to these systems.","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Reference Module in Earth Systems and Environmental Sciences","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"Elsevier","doi":"10.1016/B978-0-12-409548-9.11879-2","usgsCitation":"Winkler, D.E., 2019, Contemporary human impacts on alpine ecosystems: the direct and indirect effects of human-induced climate change and land use, chap. <i>of</i> Reference Module in Earth Systems and Environmental Sciences, https://doi.org/10.1016/B978-0-12-409548-9.11879-2.","ipdsId":"IP-103065","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":364628,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":364616,"type":{"id":15,"text":"Index Page"},"url":"https://www.sciencedirect.com/science/article/pii/B9780124095489118792?via%3Dihub"}],"publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Winkler, Daniel E. 0000-0003-4825-9073","orcid":"https://orcid.org/0000-0003-4825-9073","contributorId":206786,"corporation":false,"usgs":true,"family":"Winkler","given":"Daniel","email":"","middleInitial":"E.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":764150,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70217041,"text":"70217041 - 2019 - Integrating amphibian movement studies across scales better informs conservation decisions","interactions":[],"lastModifiedDate":"2020-12-29T13:33:10.49022","indexId":"70217041","displayToPublicDate":"2019-06-04T07:30:28","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1015,"text":"Biological Conservation","active":true,"publicationSubtype":{"id":10}},"title":"Integrating amphibian movement studies across scales better informs conservation decisions","docAbstract":"<p><span>Numerous papers have highlighted the need to integrate amphibian research and conservation across multiple scales. Despite this, most amphibian movement studies focus on a single level of organization (e.g., local population) and a single life stage (e.g., adults) and many suggest potential conservation actions or imply that the information is useful to conservation, yet these presumptions are rarely clarified or tested. Movement studies to date provide little information to guide conservation decisions directly because they fail to integrate movement across scales with individual or population parameters (i.e., fitness metrics); this is exacerbated by a general failure to set movement studies in a probabilistic context. An integrative approach allows prediction of population or metapopulation responses to environmental changes and different management actions, thus directly informing conservation decisions and ‘moving the needle’ towards an informed application of conservation actions. To support this perspective we: 1) revisit reviews of amphibian movement to illustrate the focus on single scales and to underscore the importance of movement – at all scales – to conservation; 2) make the case that movement, breeding, and other demographic probabilities are intertwined and studies executed at different temporal and spatial scales can aid in understanding species' responses to varying environmental and/or management conditions; 3) identify limitations of existing movement-related research to predict conservation action outcomes and inform decision-making; and 4) highlight under-utilized quantitative approaches that facilitate research that either connects movement to fitness metrics (individual-level studies) or estimates population and metapopulation vital rates in addition to, or associated with, movement probabilities.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.biocon.2019.05.028","usgsCitation":"Bailey, L., and Muths, E., 2019, Integrating amphibian movement studies across scales better informs conservation decisions: Biological Conservation, v. 236, p. 261-268, https://doi.org/10.1016/j.biocon.2019.05.028.","productDescription":"8 p.","startPage":"261","endPage":"268","ipdsId":"IP-101181","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":381717,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"236","noUsgsAuthors":false,"publicationStatus":"PW","contributors":{"authors":[{"text":"Bailey, Larissa L.","contributorId":229353,"corporation":false,"usgs":false,"family":"Bailey","given":"Larissa L.","affiliations":[{"id":6621,"text":"Colorado State University","active":true,"usgs":false}],"preferred":false,"id":807353,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Muths, Erin L. 0000-0002-5498-3132","orcid":"https://orcid.org/0000-0002-5498-3132","contributorId":245922,"corporation":false,"usgs":true,"family":"Muths","given":"Erin L.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":807327,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70207500,"text":"70207500 - 2019 - A physical model of the high-frequency seismic signal generated by debris flows","interactions":[],"lastModifiedDate":"2019-12-20T16:22:06","indexId":"70207500","displayToPublicDate":"2019-06-03T16:15:07","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1425,"text":"Earth Surface Processes and Landforms","active":true,"publicationSubtype":{"id":10}},"title":"A physical model of the high-frequency seismic signal generated by debris flows","docAbstract":"We propose a physical model for the high‐frequency (>1 Hz) spectral distribution of seismic power generated by debris flows. The modeled debris flow is assumed to have four regions where the impact rate and impulses are controlled by different mechanisms: the flow body, a coarser‐grained snout, a snout lip where particles fall from the snout on the bed, and a dilute front composed of saltating particles. We calculate the seismic power produced by this impact model in two end‐member scenarios, a thin‐flow and thick‐flow limit, which assume that the ratio of grain sizes to flow thicknesses are either near unity or much less than unity. The thin‐flow limit is more appropriate for boulder‐rich flows that are most likely to generate large seismic signals. As a flow passes a seismic station, the rise phase of the seismic amplitude is generated primarily by the snout while the decay phase is generated first by the snout and then the main flow body. The lip and saltating front generate a negligible seismic signal. When ground properties are known, seismic power depends most strongly on both particle diameter and average flow speed cubed, and also depends on length and width of the flow. The effective particle diameter for producing seismic power is substantially higher than the median grain size and close to the 73rd percentile for a realistic grain size distribution. We discuss how the model can be used to estimate effective particle diameter and average flow speed from an integrated measure of seismic power.","language":"English","publisher":"Wiley","doi":"10.1002/esp.4677","usgsCitation":"Farin, M., Tsai, V.C., Lamb, M.P., and Allstadt, K.E., 2019, A physical model of the high-frequency seismic signal generated by debris flows: Earth Surface Processes and Landforms, v. 44, no. 13, p. 2529-2543, https://doi.org/10.1002/esp.4677.","productDescription":"15 p.","startPage":"2529","endPage":"2543","ipdsId":"IP-107456","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":467561,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1002/esp.4677","text":"Publisher Index Page"},{"id":370589,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"44","issue":"13","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2019-07-29","publicationStatus":"PW","contributors":{"authors":[{"text":"Farin, Maxime 0000-0002-0250-2499","orcid":"https://orcid.org/0000-0002-0250-2499","contributorId":221438,"corporation":false,"usgs":false,"family":"Farin","given":"Maxime","email":"","affiliations":[{"id":7218,"text":"California Institute of Technology","active":true,"usgs":false}],"preferred":false,"id":778239,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Tsai, Victor C. 0000-0003-1809-6672","orcid":"https://orcid.org/0000-0003-1809-6672","contributorId":199684,"corporation":false,"usgs":false,"family":"Tsai","given":"Victor","email":"","middleInitial":"C.","affiliations":[{"id":27150,"text":"Seismological Laboratory, California Institute of Technology, Pasadena, CA, USA","active":true,"usgs":false}],"preferred":false,"id":778240,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Lamb, Michael P.","contributorId":214027,"corporation":false,"usgs":false,"family":"Lamb","given":"Michael","email":"","middleInitial":"P.","affiliations":[{"id":13711,"text":"Caltech","active":true,"usgs":false}],"preferred":false,"id":778241,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Allstadt, Kate E. 0000-0003-4977-5248","orcid":"https://orcid.org/0000-0003-4977-5248","contributorId":138704,"corporation":false,"usgs":true,"family":"Allstadt","given":"Kate","email":"","middleInitial":"E.","affiliations":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"preferred":true,"id":778242,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70203934,"text":"70203934 - 2019 - Local niche differences predict genotype associations in sister taxa of desert tortoise","interactions":[],"lastModifiedDate":"2019-08-13T15:56:55","indexId":"70203934","displayToPublicDate":"2019-06-03T15:37:57","publicationYear":"2019","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1399,"text":"Diversity and Distributions","active":true,"publicationSubtype":{"id":10}},"title":"Local niche differences predict genotype associations in sister taxa of desert tortoise","docAbstract":"<p>Aims </p><p>To investigate spatial congruence between ecological niches and genotype in two allopatric species of desert tortoise that are species of conservation concern. </p><p>Location </p><p>Mojave and Sonoran Desert ecoregions; California, Nevada, Arizona, Utah, USA. </p><p>Methods </p><p>We compare ecological niches of <i>Gopherus agassizii</i> and <i>Gopherus morafkai</i> using species distribution modelling (SDM) and then calibrate a pooled‐taxa distribution model to explore local differences in species–environment relationships based on the spatial residuals of the pooled‐taxa model. We use multiscale geographically weighted regression (MGWR) applied to those residuals to estimate local species–environment relationships that can vary across the landscape. We identify multivariate clusters in these local species–environment relationships and compare them against models of (a) a geographically based taxonomic designation for two sister species and (b) an environmental ecoregion designation, with respect to their ability to predict a genotype association index for these two species. </p><p>Results </p><p>We find non‐identical niches for these species, with differences that span physiographic and vegetation niche dimensions. We find evidence for two distinct clusters of local species–environment relationships that when mapped, predict an index of genotype association for the two sister taxa better than did either the geographically based taxonomic designation or an environmental ecoregion designation. </p><p>Main conclusions </p><p>Exploring local species–environment relationships by coupling SDM and MGWR can benefit studies of biogeography and conservation. We find that niche separation in habitat selection conforms to genotypic differences between sister taxa of tortoise in a recent secondary contact zone. This result may inform decision making by agencies with regulatory or land management authority for the two sister taxa addressed here.</p>","language":"English","publisher":"John Wiley & Sons Ltd","doi":"10.1111/ddi.12927","usgsCitation":"Inman, R.D., Fotheringham, A.S., Franklin, J., Esque, T., Edwards, T., and Nussear, K., 2019, Local niche differences predict genotype associations in sister taxa of desert tortoise: Diversity and Distributions, v. 25, no. 8, p. 1194-1209, https://doi.org/10.1111/ddi.12927.","productDescription":"16 p.","startPage":"1194","endPage":"1209","ipdsId":"IP-104147","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":467562,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/ddi.12927","text":"Publisher Index Page"},{"id":437431,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/P91V2S8C","text":"USGS data release","linkHelpText":"Local ecological niche models, genotype associations and environmental data for desert tortoises."},{"id":364964,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arizona, California, Nevada, Utah","otherGeospatial":"Mojave Desert, Sonoran Desert","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -119.61914062499999,\n              34.379712580462204\n            ],\n            [\n              -118.564453125,\n              33.797408767572485\n            ],\n            [\n              -117.68554687499999,\n              33.578014746143985\n            ],\n            [\n              -117.158203125,\n              32.62087018318113\n            ],\n            [\n              -114.7412109375,\n              32.731840896865684\n            ],\n            [\n              -114.78515624999999,\n              32.509761735919426\n            ],\n            [\n              -110.830078125,\n              31.316101383495624\n            ],\n            [\n              -109.2919921875,\n              33.100745405144245\n            ],\n            [\n              -112.19238281249999,\n              36.10237644873644\n            ],\n            [\n              -111.7529296875,\n              37.89219554724437\n            ],\n            [\n              -117.24609374999999,\n              37.37015718405753\n            ],\n            [\n              -120.234375,\n              36.4566360115962\n            ],\n            [\n              -119.61914062499999,\n              34.379712580462204\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"25","issue":"8","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"noUsgsAuthors":false,"publicationDate":"2019-06-03","publicationStatus":"PW","contributors":{"authors":[{"text":"Inman, Richard D. 0000-0002-1982-7791 rdinman@usgs.gov","orcid":"https://orcid.org/0000-0002-1982-7791","contributorId":187754,"corporation":false,"usgs":true,"family":"Inman","given":"Richard","email":"rdinman@usgs.gov","middleInitial":"D.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":764835,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Fotheringham, A. Stewart","contributorId":216482,"corporation":false,"usgs":false,"family":"Fotheringham","given":"A.","email":"","middleInitial":"Stewart","affiliations":[{"id":6607,"text":"Arizona State University","active":true,"usgs":false}],"preferred":false,"id":764836,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Franklin, Janet","contributorId":197972,"corporation":false,"usgs":false,"family":"Franklin","given":"Janet","email":"","affiliations":[],"preferred":false,"id":764837,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Esque, Todd 0000-0002-4166-6234 tesque@usgs.gov","orcid":"https://orcid.org/0000-0002-4166-6234","contributorId":195896,"corporation":false,"usgs":true,"family":"Esque","given":"Todd","email":"tesque@usgs.gov","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":764834,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Edwards, Taylor","contributorId":210006,"corporation":false,"usgs":false,"family":"Edwards","given":"Taylor","email":"","affiliations":[{"id":38044,"text":"University of Arizona Genetics Core, 1657 E. Helen Street, Room 111, University of Arizona, Tucson, AZ 85721","active":true,"usgs":false}],"preferred":false,"id":764838,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Nussear, Kenneth","contributorId":194538,"corporation":false,"usgs":false,"family":"Nussear","given":"Kenneth","affiliations":[{"id":24618,"text":"Department of Geography, University of Nevada, Reno, Reno, NV","active":true,"usgs":false}],"preferred":false,"id":764839,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
]}