{"pageNumber":"83","pageRowStart":"2050","pageSize":"25","recordCount":4111,"records":[{"id":70032414,"text":"70032414 - 2011 - Seasonal timing of first rain storms affects rare plant population dynamics","interactions":[],"lastModifiedDate":"2013-03-07T09:55:03","indexId":"70032414","displayToPublicDate":"2011-01-01T00:00:00","publicationYear":"2011","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1465,"text":"Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Seasonal timing of first rain storms affects rare plant population dynamics","docAbstract":"A major challenge in forecasting the ecological consequences of climate change is understanding the relative importance of changes to mean conditions vs. changes to discrete climatic events, such as storms, frosts, or droughts. Here we show that the first major storm of the growing season strongly influences the population dynamics of three rare and endangered annual plant species in a coastal California (USA) ecosystem. In a field experiment we used moisture barriers and water addition to manipulate the timing and temperature associated with first major rains of the season. The three focal species showed two- to fivefold variation in per capita population growth rates between the different storm treatments, comparable to variation found in a prior experiment imposing eightfold differences in season-long precipitation. Variation in germination was a major demographic driver of how two of three species responded to the first rains. For one of these species, the timing of the storm was the most critical determinant of its germination, while the other showed enhanced germination with colder storm temperatures. The role of temperature was further supported by laboratory trials showing enhanced germination in cooler treatments. Our work suggests that, because of species-specific cues for demographic transitions such as germination, changes to discrete climate events may be as, if not more, important than changes to season-long variables.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Ecology","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","doi":"10.1890/11-0471.1","issn":"00129658","usgsCitation":"Levine, J., McEachern, A.K., and Cowan, C., 2011, Seasonal timing of first rain storms affects rare plant population dynamics: Ecology, v. 92, no. 12, p. 2236-2247, https://doi.org/10.1890/11-0471.1.","productDescription":"12 p.","startPage":"2236","endPage":"2247","numberOfPages":"12","costCenters":[],"links":[{"id":213688,"rank":9999,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1890/11-0471.1"},{"id":241339,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"92","issue":"12","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505b88dde4b08c986b316bee","contributors":{"authors":[{"text":"Levine, J.M.","contributorId":77748,"corporation":false,"usgs":true,"family":"Levine","given":"J.M.","email":"","affiliations":[],"preferred":false,"id":436051,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"McEachern, A. K.","contributorId":29777,"corporation":false,"usgs":true,"family":"McEachern","given":"A.","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":436049,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Cowan, C.","contributorId":46777,"corporation":false,"usgs":true,"family":"Cowan","given":"C.","email":"","affiliations":[],"preferred":false,"id":436050,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70032260,"text":"70032260 - 2011 - Mineralogical and geochemical evidence for hydrothermal activity at the west wall of 12°50′N core complex (Mid-Atlantic ridge): a new ultramafic-hosted seafloor hydrothermal deposit?","interactions":[],"lastModifiedDate":"2015-03-23T09:51:31","indexId":"70032260","displayToPublicDate":"2011-01-01T00:00:00","publicationYear":"2011","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2667,"text":"Marine Geology","active":true,"publicationSubtype":{"id":10}},"title":"Mineralogical and geochemical evidence for hydrothermal activity at the west wall of 12°50′N core complex (Mid-Atlantic ridge): a new ultramafic-hosted seafloor hydrothermal deposit?","docAbstract":"<p>Dredging along the west wall of the core complex at 12&deg;50&prime;N Mid-Atlantic Ridge sampled a number of black oxyhydroxide crusts and breccias cemented by black and dark brown oxyhydroxide matrix. Black crusts found on top of basalt clasts (rubble) are mainly composed of Mn-oxides (birnessite, 10-&Aring; manganates) with thin films of nontronite and X-ray amorphous FeOOH on their surfaces. Their chemical composition (low trace- and rare earth-element contents, high Li and Ag concentrations, rare earth element distribution patterns with negative both Ce and Eu anomalies), Sr&ndash;Nd&ndash;Pb-isotope systematic and O-isotope data suggest low-temperature (~&nbsp;20&nbsp;&deg;C) hydrothermal deposition from a diffuse vent area on the seafloor. Mineralogical, petrographic and geochemical investigations of the breccias showed the rock clasts were hydrothermally altered fragments of MORBs. Despite the substantial mineralogical changes caused by the alteration the Sr&ndash;Nd&ndash;Pb-isotope ratios have not been significantly affected by this process. The basalt clasts are cemented by dark brown and black matrix. Dark brown cement exhibits geochemical features (very low trace- and rare earth- element contents, high U concentration, rare earth element distribution pattern with high positive Eu anomaly) and Nd&ndash;Pb-isotope systematics (similar to that of MORB) suggesting that the precursor was a primary, high-temperature Fe-sulfide, which was eventually altered to goethite at ambient seawater conditions. The data presented in this work points towards the possible existence of high- and low-temperature hydrothermal activity at the west wall of the core complex at 12&deg;50&prime;N Mid-Atlantic Ridge. Tectonic setting at the site implies that the proposed hydrothermal field is possibly ultramafic-hosted.</p>","largerWorkTitle":"Elsevier","language":"English","doi":"10.1016/j.margeo.2011.09.002","issn":"00253227","usgsCitation":"Dekov, V., Boycheva, T., Halenius, U., Billstrom, K., Kamenov, G.D., Shanks, W., and Stummeyer, J., 2011, Mineralogical and geochemical evidence for hydrothermal activity at the west wall of 12°50′N core complex (Mid-Atlantic ridge): a new ultramafic-hosted seafloor hydrothermal deposit?: Marine Geology, v. 288, no. 1-4, p. 90-102, https://doi.org/10.1016/j.margeo.2011.09.002.","productDescription":"13 p.","startPage":"90","endPage":"102","onlineOnly":"N","additionalOnlineFiles":"N","costCenters":[],"links":[{"id":242614,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":214860,"rank":9999,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1016/j.margeo.2011.09.002"}],"volume":"288","issue":"1-4","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505a5a93e4b0c8380cd6ef9d","contributors":{"authors":[{"text":"Dekov, Vesselin","contributorId":58883,"corporation":false,"usgs":true,"family":"Dekov","given":"Vesselin","email":"","affiliations":[],"preferred":false,"id":435298,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Boycheva, Tanya","contributorId":101501,"corporation":false,"usgs":true,"family":"Boycheva","given":"Tanya","email":"","affiliations":[],"preferred":false,"id":435301,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Halenius, Ulf","contributorId":104751,"corporation":false,"usgs":true,"family":"Halenius","given":"Ulf","email":"","affiliations":[],"preferred":false,"id":435302,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Billstrom, Kjell","contributorId":90971,"corporation":false,"usgs":true,"family":"Billstrom","given":"Kjell","email":"","affiliations":[],"preferred":false,"id":435300,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Kamenov, George D.","contributorId":76134,"corporation":false,"usgs":true,"family":"Kamenov","given":"George","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":435299,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Shanks, Wayne C.","contributorId":39419,"corporation":false,"usgs":true,"family":"Shanks","given":"Wayne C.","affiliations":[],"preferred":false,"id":435297,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Stummeyer, Jens","contributorId":31206,"corporation":false,"usgs":true,"family":"Stummeyer","given":"Jens","email":"","affiliations":[],"preferred":false,"id":435296,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70196545,"text":"70196545 - 2011 - Dispersal, mortality, and predation on recently-stocked rainbow trout in Dale Hollow Lake, Tennessee","interactions":[],"lastModifiedDate":"2018-04-16T17:04:42","indexId":"70196545","displayToPublicDate":"2011-01-01T00:00:00","publicationYear":"2011","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3139,"text":"Proceedings of the Annual Conference of the Southeastern Association of Fish and Wildlife Agencies","active":true,"publicationSubtype":{"id":10}},"title":"Dispersal, mortality, and predation on recently-stocked rainbow trout in Dale Hollow Lake, Tennessee","docAbstract":"<p><span>Forty-four hatchery-raised rainbow trout (Oncorhynchus mykiss) were implanted with ultrasonic tags and stocked into Dale Hollow Lake, Tennessee, and tracked at least once per week for eight weeks to describe post-stocking dispersal rates, movements, and habitat use. Dispersal followed a three-stage pattern characterized by rapid movement away from each stocking site during the first week, relatively little dispersal during the next three weeks, and further dispersion during the final four weeks that fish were tracked. Rainbow trout exhibited a strong affinity for coves and were rarely encountered in the main channel. Tagged fish stocked in March exhibited lower mortality (Zweekly = 0.027) than those stocked in January (Zweekly = 0.062) during the first eight weeks post-stocking. Diets of potential predators in Dale Hollow Lake were examined. Walleye (Sander vitreus), smallmouth bass (Micropterus dolomieu), largemouth bass (M. salmoides), and holdover rainbow trout all preyed on recently stocked trout. Larger walleye were more likely to prey on stocked rainbow trout, and walleye of all sizes tended to prey on the smaller trout in each stocked cohort. Walleye were more likely to feed on rainbow trout during January than March. Effective stocking strategies should focus on reducing predation by stocking larger rainbow trout or by stocking when predation risk is minimized (i.e., March).</span></p>","language":"English","publisher":"SEAFWA","usgsCitation":"Ivasauskas, T.J., and Bettoli, P.W., 2011, Dispersal, mortality, and predation on recently-stocked rainbow trout in Dale Hollow Lake, Tennessee: Proceedings of the Annual Conference of the Southeastern Association of Fish and Wildlife Agencies, v. 65, p. 83-91.","productDescription":"9 p.","startPage":"83","endPage":"91","ipdsId":"IP-024576","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":353473,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":353472,"rank":1,"type":{"id":15,"text":"Index Page"},"url":"https://www.seafwa.org/publications/proceedings/"}],"country":"United States","state":"Tennessee","otherGeospatial":"Dale Hollow Lake","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -85.46985626220703,\n              36.50135727459895\n            ],\n            [\n              -85.3634262084961,\n              36.50135727459895\n            ],\n            [\n              -85.3634262084961,\n              36.586863023441836\n            ],\n            [\n              -85.46985626220703,\n              36.586863023441836\n            ],\n            [\n              -85.46985626220703,\n              36.50135727459895\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"65","publishingServiceCenter":{"id":8,"text":"Raleigh PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5afef55ee4b0da30c1bfc8f7","contributors":{"authors":[{"text":"Ivasauskas, Tomas J.","contributorId":84176,"corporation":false,"usgs":false,"family":"Ivasauskas","given":"Tomas","email":"","middleInitial":"J.","affiliations":[{"id":7091,"text":"North Carolina State University","active":true,"usgs":false}],"preferred":false,"id":733591,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Bettoli, Phillip William pbettoli@usgs.gov","contributorId":1919,"corporation":false,"usgs":true,"family":"Bettoli","given":"Phillip","email":"pbettoli@usgs.gov","middleInitial":"William","affiliations":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":true,"id":733529,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70193335,"text":"70193335 - 2011 - Coluber (= Masticophis) flagellum piceus (Red Racer). Arboreal/nocturnal behavior","interactions":[],"lastModifiedDate":"2017-10-31T15:42:45","indexId":"70193335","displayToPublicDate":"2011-01-01T00:00:00","publicationYear":"2011","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1898,"text":"Herpetological Review","active":true,"publicationSubtype":{"id":10}},"displayTitle":"<i>Coluber</i> (= <i>Masticophis</i>) <i>flagellum piceus</i> (Red Racer). Arboreal/nocturnal behavior","title":"Coluber (= Masticophis) flagellum piceus (Red Racer). Arboreal/nocturnal behavior","docAbstract":"<p>Many species of snakes display arboreal behavior and are often found in vegetation many meters above ground. Mojave Desert snake species rarely get very far above the ground surface and are perhaps limited by predominantly low growing vegetation. <i>Coluber flagellum piceus</i> is considered strictly diurnal and although may ascend vegetation while active, is thought to retreat to subterranean refugia at night. Werler and Dixon (2000. Texas Snakes: Identification, Distribution, and Natural History. University of Texas Press, Austin. 437 pp.) stated “The western coachwhip is active above ground only during daylight hours. It almost invariably retires to depths of an animal burrow before sundown, where it spends the night.” The normal morning activity period for <i>C. flagellum</i> appears to be from approximately 0700–1000 h from June through September (Jones and Whitford 1989. Southwest. Nat. 34:460–467). Secor and Nagy (1994. Ecology 75:1600–1614), and Secor (1995. Herpetol. Monogr. 9:169–186) determined that the average body temperature for active above ground activity of <i>C. flagellum</i> was (33.1°C + 0.1°C, range of 24.0°C–40.8°C, N = 502), stating that coachwhip snakes were seldom active on the surface with body temperatures below 28°C. Here, I report a <i>C. f. piceus</i> that apparently spent the night draped in a Creosote Bush (<i>Larrea tridentata</i>).</p>","language":"English","publisher":"Society for the Study of Amphibians and Reptiles","usgsCitation":"Medica, P.A., 2011, Coluber (= Masticophis) flagellum piceus (Red Racer). Arboreal/nocturnal behavior: Herpetological Review, v. 42, no. 4, p. 612-613.","productDescription":"2 p.","startPage":"612","endPage":"613","ipdsId":"IP-025476","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":347921,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":347914,"type":{"id":15,"text":"Index Page"},"url":"https://ssarherps.org/herpetological-review-pdfs/"}],"country":"United States","state":"Nevada","county":"Clark County","volume":"42","issue":"4","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"59f98bc2e4b0531197afa089","contributors":{"authors":[{"text":"Medica, Phil A. 0000-0002-5901-8841 pmedica@usgs.gov","orcid":"https://orcid.org/0000-0002-5901-8841","contributorId":3226,"corporation":false,"usgs":true,"family":"Medica","given":"Phil","email":"pmedica@usgs.gov","middleInitial":"A.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":718733,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70173486,"text":"70173486 - 2010 - The Index of Biological Integrity and the bootstrap revisited: an example from Minnesota streams","interactions":[],"lastModifiedDate":"2016-06-17T12:54:13","indexId":"70173486","displayToPublicDate":"2016-01-12T10:30:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1456,"text":"Ecological Indicators","active":true,"publicationSubtype":{"id":10}},"title":"The Index of Biological Integrity and the bootstrap revisited: an example from Minnesota streams","docAbstract":"<p><span>Multimetric indices, such as the Index of Biological Integrity (IBI), are increasingly used by management agencies to determine whether surface water quality is impaired. However, important questions about the variability of these indices have not been thoroughly addressed in the scientific literature. In this study, we used a bootstrap approach to quantify variability associated with fish IBIs developed for streams in two Minnesota river basins. We further placed this variability into a management context by comparing it to impairment thresholds currently used in water quality determinations for Minnesota streams. We found that 95% confidence intervals ranged as high as 40 points for IBIs scored on a 0&ndash;100 point scale. However, on average, 90% of IBI scores calculated from bootstrap replicate samples for a given stream site yielded the same impairment status as the original IBI score. We suggest that sampling variability in IBI scores is related to both the number of fish and the number of rare taxa in a field collection. A comparison of the effects of different scoring methods on IBI variability indicates that a continuous scoring method may reduce the amount of bias in IBI scores.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.ecolind.2009.10.001","usgsCitation":"Dolph, C.L., Sheshukov, A.Y., Chizinski, C.J., Vondracek, B.C., and Wilson, B., 2010, The Index of Biological Integrity and the bootstrap revisited: an example from Minnesota streams: Ecological Indicators, v. 10, no. 2, p. 527-537, https://doi.org/10.1016/j.ecolind.2009.10.001.","productDescription":"10 p.","startPage":"527","endPage":"537","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-013103","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":475455,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"http://hdl.handle.net/11299/183573","text":"External 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,{"id":70173465,"text":"70173465 - 2010 - Using landscape limnology to classify freshwater ecosystems for multi-ecosystem management and conservation","interactions":[],"lastModifiedDate":"2016-06-17T14:19:28","indexId":"70173465","displayToPublicDate":"2015-11-11T10:30:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":997,"text":"BioScience","active":true,"publicationSubtype":{"id":10}},"title":"Using landscape limnology to classify freshwater ecosystems for multi-ecosystem management and conservation","docAbstract":"<p><span>Governmental entities are responsible for managing and conserving large numbers of lake, river, and wetland ecosystems that can be addressed only rarely on a case-by-case basis. We present a system for predictive classification modeling, grounded in the theoretical foundation of landscape limnology, that creates a tractable number of ecosystem classes to which management actions may be tailored. We demonstrate our system by applying two types of predictive classification modeling approaches to develop nutrient criteria for eutrophication management in 1998 north temperate lakes. Our predictive classification system promotes the effective management of multiple ecosystems across broad geographic scales by explicitly connecting management and conservation goals to the classification modeling approach, considering multiple spatial scales as drivers of ecosystem dynamics, and acknowledging the hierarchical structure of freshwater ecosystems. Such a system is critical for adaptive management of complex mosaics of freshwater ecosystems and for balancing competing needs for ecosystem services in a changing world.</span></p>","language":"English","publisher":"American Institute of Biological Sciences","doi":"10.1525/bio.2010.60.6.8","usgsCitation":"Soranno, P.A., Cheruvelil, K.S., Webster, K.E., Bremigan, M.T., Wagner, T., and Stow, C., 2010, Using landscape limnology to classify freshwater ecosystems for multi-ecosystem management and conservation: BioScience, v. 60, no. 6, p. 440-454, https://doi.org/10.1525/bio.2010.60.6.8.","productDescription":"14 p.","startPage":"440","endPage":"454","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-017080","costCenters":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"links":[{"id":323916,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Iowa, Maine, Michigan, Ohio, 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,{"id":70004122,"text":"70004122 - 2010 - Mercury monitoring in fish using a non-lethal tissue biopsy method","interactions":[],"lastModifiedDate":"2018-10-17T17:15:48","indexId":"70004122","displayToPublicDate":"2015-08-10T05:30:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":5761,"text":"Missouri Department of Conservation Science Notes","active":true,"publicationSubtype":{"id":10}},"title":"Mercury monitoring in fish using a non-lethal tissue biopsy method","docAbstract":"<p>The occurrence of mercury in fish is well-known and often occurs at levels that warrant restricted consumption by sensitive human populations. Because of this, local wildlife and health agencies have developed monitoring programs to identify the magnitude of fish contamination and changes through time. Monitoring mercury levels in fish typically requires killing fish for removal of a fillet. Recently, researchers have proposed the use of a non-lethal tissue biopsy plug method as a surrogate for analysis of the entire fillet.</p>\n<p>A non-lethal method is particularly desirable for sampling rare or endangered fish or highly valued fisheries. The Missouri Department of Conservation manages several fisheries where the public is sensitive to excessive fish removal, yet there is a desire for mercury information. One such example is the trophy smallmouth bass (Micropterus dolomieu) fishery in the Ozark&rsquo;s Eleven Point River. Plug removal is not expected to affect fish survival in the shortterm. However, limited information is available on survival of fish for weeks or months after plug removal.</p>","language":"English","publisher":"Missouri Department of Conservation","usgsCitation":"Ackerson, J., Schmitt, C.J., McKee, M.J., and Brumbaugh, W.G., 2010, Mercury monitoring in fish using a non-lethal tissue biopsy method: Missouri Department of Conservation Science Notes, v. 5, no. 14, 2 p.","productDescription":"2 p.","onlineOnly":"N","additionalOnlineFiles":"N","ipdsId":"IP-024513","costCenters":[{"id":34983,"text":"Contaminant Biology Program","active":true,"usgs":true}],"links":[{"id":310957,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Missouri","otherGeospatial":"Eleven Point River","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -92.57080078125,\n              36.491973470593685\n            ],\n            [\n              -92.57080078125,\n              37.08585785263673\n            ],\n            [\n              -91.153564453125,\n              37.08585785263673\n            ],\n            [\n              -91.153564453125,\n              36.491973470593685\n            ],\n            [\n              -92.57080078125,\n              36.491973470593685\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"5","issue":"14","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"56389759e4b0d6133fe72fcb","contributors":{"authors":[{"text":"Ackerson, J.","contributorId":116648,"corporation":false,"usgs":true,"family":"Ackerson","given":"J.","email":"","affiliations":[],"preferred":true,"id":512825,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Schmitt, Christopher J. 0000-0001-6804-2360 cjschmitt@usgs.gov","orcid":"https://orcid.org/0000-0001-6804-2360","contributorId":491,"corporation":false,"usgs":true,"family":"Schmitt","given":"Christopher","email":"cjschmitt@usgs.gov","middleInitial":"J.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":579085,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"McKee, Michael J.","contributorId":115392,"corporation":false,"usgs":true,"family":"McKee","given":"Michael","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":512824,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Brumbaugh, William G. 0000-0003-0081-375X bbrumbaugh@usgs.gov","orcid":"https://orcid.org/0000-0003-0081-375X","contributorId":493,"corporation":false,"usgs":true,"family":"Brumbaugh","given":"William","email":"bbrumbaugh@usgs.gov","middleInitial":"G.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":579086,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70045912,"text":"70045912 - 2010 - Mineral resource of the month: platinum group metals","interactions":[],"lastModifiedDate":"2013-05-08T17:55:36","indexId":"70045912","displayToPublicDate":"2013-01-01T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1419,"text":"Earth","active":true,"publicationSubtype":{"id":10}},"title":"Mineral resource of the month: platinum group metals","docAbstract":"The article focuses on platinum group metals (PGMs) and their properties. According to the author, PGMs, which include iridium, osmium, palladium, platinum, rhodium, and ruthenium, are among the rarest mineral commodities in the Earth's crust. PGMs are primarily used as catalytic converters that clean harmful exhaust from vehicle engines. They are also used in the chemical industry as catalysts in the production of nitric acid and in the petroleum refining industry.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Earth","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"AGI","usgsCitation":"Loferski, P.J., 2010, Mineral resource of the month: platinum group metals: Earth, v. 55, no. 7, p. 28-29.","productDescription":"2 p.","startPage":"28","endPage":"29","costCenters":[{"id":432,"text":"National Minerals Information Center","active":true,"usgs":true}],"links":[{"id":272094,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"55","issue":"7","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"518b73f0e4b0037667dbc88b","contributors":{"authors":[{"text":"Loferski, Patricia J. ploferski@usgs.gov","contributorId":4096,"corporation":false,"usgs":true,"family":"Loferski","given":"Patricia","email":"ploferski@usgs.gov","middleInitial":"J.","affiliations":[],"preferred":true,"id":478526,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70045705,"text":"70045705 - 2010 - Model-based evaluation of highly and low pathogenic avian influenza dynamics in wild birds","interactions":[],"lastModifiedDate":"2013-04-30T10:54:26","indexId":"70045705","displayToPublicDate":"2013-01-01T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2980,"text":"PLoS ONE","active":true,"publicationSubtype":{"id":10}},"title":"Model-based evaluation of highly and low pathogenic avian influenza dynamics in wild birds","docAbstract":"There is growing interest in avian influenza (AI) epidemiology to predict disease risk in wild and domestic birds, and prevent transmission to humans. However, understanding the epidemic dynamics of highly pathogenic (HPAI) viruses remains challenging because they have rarely been detected in wild birds. We used modeling to integrate available scientific information from laboratory and field studies, evaluate AI dynamics in individual hosts and waterfowl populations, and identify key areas for future research. We developed a Susceptible-Exposed-Infectious-Recovered (SEIR) model and used published laboratory challenge studies to estimate epidemiological parameters (rate of infection, latency period, recovery and mortality rates), considering the importance of age classes, and virus pathogenicity. Infectious contact leads to infection and virus shedding within 1–2 days, followed by relatively slower period for recovery or mortality. We found a shorter infectious period for HPAI than low pathogenic (LP) AI, which may explain that HPAI has been much harder to detect than LPAI during surveillance programs. Our model predicted a rapid LPAI epidemic curve, with a median duration of infection of 50–60 days and no fatalities. In contrast, HPAI dynamics had lower prevalence and higher mortality, especially in young birds. Based on field data from LPAI studies, our model suggests to increase surveillance for HPAI in post-breeding areas, because the presence of immunologically naïve young birds is predicted to cause higher HPAI prevalence and bird losses during this season. Our results indicate a better understanding of the transmission, infection, and immunity-related processes is required to refine predictions of AI risk and spread, improve surveillance for HPAI in wild birds, and develop disease control strategies to reduce potential transmission to domestic birds and/or humans.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"PLoS ONE","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Public Library of Science","usgsCitation":"Hénaux, V., Samuel, M.D., and Bunck, C.M., 2010, Model-based evaluation of highly and low pathogenic avian influenza dynamics in wild birds: PLoS ONE, v. 5, no. 6, e10997.","productDescription":"e10997","costCenters":[{"id":675,"text":"Wisconsin Cooperative Wildlife Research Unit","active":false,"usgs":true}],"links":[{"id":271638,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"5","issue":"6","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5180e7e8e4b0df838b924d75","contributors":{"authors":[{"text":"Hénaux, Viviane","contributorId":47670,"corporation":false,"usgs":true,"family":"Hénaux","given":"Viviane","affiliations":[],"preferred":false,"id":478120,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Samuel, Michael D. msamuel@usgs.gov","contributorId":1419,"corporation":false,"usgs":true,"family":"Samuel","given":"Michael","email":"msamuel@usgs.gov","middleInitial":"D.","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true}],"preferred":true,"id":478119,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bunck, Christine M. cbunck@usgs.gov","contributorId":731,"corporation":false,"usgs":true,"family":"Bunck","given":"Christine","email":"cbunck@usgs.gov","middleInitial":"M.","affiliations":[],"preferred":true,"id":478118,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70045703,"text":"70045703 - 2010 - Prevalence of antibodies to type A influenza virus in wild avian species using two serologic assays","interactions":[],"lastModifiedDate":"2018-01-03T14:46:56","indexId":"70045703","displayToPublicDate":"2013-01-01T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2507,"text":"Journal of Wildlife Diseases","active":true,"publicationSubtype":{"id":10}},"title":"Prevalence of antibodies to type A influenza virus in wild avian species using two serologic assays","docAbstract":"<p><span>Serologic testing to detect antibodies to avian influenza (AI) virus has been an underused tool for the study of these viruses in wild bird populations, which traditionally has relied on virus isolation and reverse transcriptase-polymerase chain reaction (RT-PCR). In a preliminary study, a recently developed commercial blocking enzyme-linked immunosorbent assay (bELISA) had sensitivity and specificity estimates of 82% and 100%, respectively, for detection of antibodies to AI virus in multiple wild bird species after experimental infection. To further evaluate the efficacy of this commercial bELISA and the agar gel immunodiffusion (AGID) test for AI virus antibody detection in wild birds, we tested 2,249 serum samples collected from 62 wild bird species, representing 10 taxonomic orders. Overall, the bELISA detected 25.4% positive samples, whereas the AGID test detected 14.8%. At the species level, the bELISA detected as many or more positive serum samples than the AGID in all 62 avian species. The majority of positive samples, detected by both assays, were from species that use aquatic habitats, with the highest prevalence from species in the orders Anseriformes and Charadriiformes. Conversely, antibodies to AI virus were rarely detected in the terrestrial species. The serologic data yielded by both assays are consistent with the known epidemiology of AI virus in wild birds and published reports of host range based on virus isolation and RT-PCR. The results of this research are also consistent with the aforementioned study, which evaluated the performance of the bELISA and AGID test on experimental samples. Collectively, the data from these two studies indicate that the bELISA is a more sensitive serologic assay than the AGID test for detecting prior exposure to AI virus in wild birds. Based on these results, the bELISA is a reliable species-independent assay with potentially valuable applications for wild bird AI surveillance.</span></p>","language":"English","publisher":"Wildlife Disease Association","doi":"10.7589/0090-3558-46.3.896","usgsCitation":"Brown, J.D., Luttrell, M.P., Berghaus, R., Kistler, W., Keeler, S.P., Howey, A., Wilcox, B., Hall, J.S., Niles, L., Dey, A., Knutsen, G., Fritz, K., and Stallknecht, D.E., 2010, Prevalence of antibodies to type A influenza virus in wild avian species using two serologic assays: Journal of Wildlife Diseases, v. 46, no. 3, p. 896-911, https://doi.org/10.7589/0090-3558-46.3.896.","productDescription":"16 p.","startPage":"896","endPage":"911","onlineOnly":"N","additionalOnlineFiles":"N","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"links":[{"id":475474,"rank":2,"type":{"id":40,"text":"Open Access Publisher Index 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,{"id":70043685,"text":"70043685 - 2010 - Improving inferences from fisheries capture-recapture studies through remote detection of PIT tags","interactions":[],"lastModifiedDate":"2013-06-06T13:58:33","indexId":"70043685","displayToPublicDate":"2013-01-01T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1657,"text":"Fisheries","onlineIssn":"1548-8446","printIssn":"0363-2415","active":true,"publicationSubtype":{"id":10}},"title":"Improving inferences from fisheries capture-recapture studies through remote detection of PIT tags","docAbstract":"Models for capture-recapture data are commonly used in analyses of the dynamics of fish and wildlife populations, especially for estimating vital parameters such as survival. Capture-recapture methods provide more reliable inferences than other methods commonly used in fisheries studies. However, for rare or elusive fish species, parameter estimation is often hampered by small probabilities of re-encountering tagged fish when encounters are obtained through traditional sampling methods. We present a case study that demonstrates how remote antennas for passive integrated transponder (PIT) tags can increase encounter probabilities and the precision of survival estimates from capture-recapture models. Between 1999 and 2007, trammel nets were used to capture and tag over 8,400 endangered adult Lost River suckers (Deltistes luxatus) during the spawning season in Upper Klamath Lake, Oregon. Despite intensive sampling at relatively discrete spawning areas, encounter probabilities from Cormack-Jolly-Seber models were consistently low (< 0.2) and the precision of apparent annual survival estimates was poor. Beginning in 2005, remote PIT tag antennas were deployed at known spawning locations to increase the probability of re-encountering tagged fish. We compare results based only on physical recaptures with results based on both physical recaptures and remote detections to demonstrate the substantial improvement in estimates of encounter probabilities (approaching 100%) and apparent annual survival provided by the remote detections. The richer encounter histories provided robust inferences about the dynamics of annual survival and have made it possible to explore more realistic models and hypotheses about factors affecting the conservation and recovery of this endangered species. Recent advances in technology related to PIT tags have paved the way for creative implementation of large-scale tagging studies in systems where they were previously considered impracticable.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Fisheries","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Taylor & Francis","doi":"10.1577/1548-8446-35.5.217","usgsCitation":"Hewitt, D.A., Janney, E.C., Hayes, B., and Shively, R.S., 2010, Improving inferences from fisheries capture-recapture studies through remote detection of PIT tags: Fisheries, v. 35, no. 5, p. 217-231, https://doi.org/10.1577/1548-8446-35.5.217.","productDescription":"15 p.","startPage":"217","endPage":"231","ipdsId":"IP-016069","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":273408,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":273407,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1577/1548-8446-35.5.217"}],"volume":"35","issue":"5","noUsgsAuthors":false,"publicationDate":"2010-05-01","publicationStatus":"PW","scienceBaseUri":"51b1bbd3e4b022a6a540f9e4","contributors":{"authors":[{"text":"Hewitt, David A. 0000-0002-5387-0275 dhewitt@usgs.gov","orcid":"https://orcid.org/0000-0002-5387-0275","contributorId":3767,"corporation":false,"usgs":false,"family":"Hewitt","given":"David","email":"dhewitt@usgs.gov","middleInitial":"A.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":474070,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Janney, Eric C. 0000-0002-0228-2174","orcid":"https://orcid.org/0000-0002-0228-2174","contributorId":83629,"corporation":false,"usgs":true,"family":"Janney","given":"Eric","email":"","middleInitial":"C.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":false,"id":474072,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hayes, Brian S. 0000-0001-8229-4070","orcid":"https://orcid.org/0000-0001-8229-4070","contributorId":37022,"corporation":false,"usgs":true,"family":"Hayes","given":"Brian S.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":false,"id":474071,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Shively, Rip S. rsshively@usgs.gov","contributorId":233,"corporation":false,"usgs":true,"family":"Shively","given":"Rip","email":"rsshively@usgs.gov","middleInitial":"S.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":474069,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70003696,"text":"70003696 - 2010 - Interfacing models of wildlife habitat and human development to predict the future distribution of puma habitat","interactions":[],"lastModifiedDate":"2012-06-01T01:01:40","indexId":"70003696","displayToPublicDate":"2012-05-23T10:33:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1475,"text":"Ecosphere","active":true,"publicationSubtype":{"id":10}},"title":"Interfacing models of wildlife habitat and human development to predict the future distribution of puma habitat","docAbstract":"The impact of human land uses on ecological systems typically differ relative to how extensively natural conditions are modified. Exurban development is intermediate-intensity residential development that often occurs in natural landscapes. Most species-habitat models do not evaluate the effects of such intermediate levels of human development and even fewer predict how future development patterns might affect the amount and configuration of habitat. We addressed these deficiencies by interfacing a habitat model with a spatially-explicit housing-density model to study the effect of human land uses on the habitat of pumas (<i>Puma concolor</i>) in southern California. We studied the response of pumas to natural and anthropogenic features within their home ranges and how mortality risk varied across a gradient of human development. We also used our housing-density model to estimate past and future housing densities and model the distribution of puma habitat in 1970, 2000, and 2030. The natural landscape for pumas in our study area consisted of riparian areas, oak woodlands, and open, conifer forests embedded in a chaparral matrix. Pumas rarely incorporated suburban or urban development into their home ranges, which is consistent with the hypothesis that the behavioral decisions of individuals can be collectively manifested as population-limiting factors at broader spatial scales. Pumas incorporated rural and exurban development into their home ranges, apparently perceiving these areas as modified, rather than non-habitat. Overall, pumas used exurban areas less than expected and showed a neutral response to rural areas. However, individual pumas that selected for or showed a neutral response to exurban areas had a higher risk of mortality than pumas that selected against exurban habitat. Exurban areas are likely hotspots for puma-human conflict in southern California. Approximately 10% of our study area will transform from exurban, rural, or undeveloped areas to suburban or urban by 2030, and 35% of suitable puma habitat on private land in 1970 will have been lost by 2030. These land-use changes will further isolate puma populations in southern California, but the ability to visualize these changes had provided a new tool for developing proactive conservation solutions.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Ecosphere","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Ecological Society of America","publisherLocation":"Ithaca, NY","doi":"10.1890/ES10-00005.1","usgsCitation":"Burdett, C.L., Crooks, K.R., Theobald, D.M., Wilson, K.R., Boydston, E.E., Lyren, L.A., Fisher, R.N., Vickers, T., Morrison, S.A., and Boyce, W.M., 2010, Interfacing models of wildlife habitat and human development to predict the future distribution of puma habitat: Ecosphere, v. 1, no. 1, https://doi.org/10.1890/ES10-00005.1.","startPage":"Article 4","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":475487,"rank":201,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1890/es10-00005.1","text":"Publisher Index Page"},{"id":257093,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":257082,"rank":200,"type":{"id":11,"text":"Document"},"url":"https://dx.doi.org/10.1890/ES10-00005.1","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"California","volume":"1","issue":"1","noUsgsAuthors":false,"publicationDate":"2010-07-31","publicationStatus":"PW","scienceBaseUri":"505a3cfae4b0c8380cd631d0","contributors":{"authors":[{"text":"Burdett, Christopher L.","contributorId":13086,"corporation":false,"usgs":true,"family":"Burdett","given":"Christopher","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":348382,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Crooks, Kevin R.","contributorId":51137,"corporation":false,"usgs":false,"family":"Crooks","given":"Kevin","email":"","middleInitial":"R.","affiliations":[{"id":6621,"text":"Colorado State University","active":true,"usgs":false}],"preferred":false,"id":348384,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Theobald, David M. 0000-0002-1271-9368","orcid":"https://orcid.org/0000-0002-1271-9368","contributorId":10271,"corporation":false,"usgs":false,"family":"Theobald","given":"David","email":"","middleInitial":"M.","affiliations":[{"id":13470,"text":"Conservation Science Partners","active":true,"usgs":false}],"preferred":true,"id":348381,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Wilson, Kenneth R.","contributorId":29255,"corporation":false,"usgs":true,"family":"Wilson","given":"Kenneth","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":348383,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Boydston, Erin E. 0000-0002-8452-835X eboydston@usgs.gov","orcid":"https://orcid.org/0000-0002-8452-835X","contributorId":1705,"corporation":false,"usgs":true,"family":"Boydston","given":"Erin","email":"eboydston@usgs.gov","middleInitial":"E.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348380,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Lyren, Lisa A.","contributorId":87407,"corporation":false,"usgs":true,"family":"Lyren","given":"Lisa","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":348388,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Fisher, Robert N. 0000-0002-2956-3240 rfisher@usgs.gov","orcid":"https://orcid.org/0000-0002-2956-3240","contributorId":1529,"corporation":false,"usgs":true,"family":"Fisher","given":"Robert","email":"rfisher@usgs.gov","middleInitial":"N.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348379,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Vickers, T. Winston","contributorId":52822,"corporation":false,"usgs":true,"family":"Vickers","given":"T. Winston","affiliations":[],"preferred":false,"id":348385,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Morrison, Scott A.","contributorId":83780,"corporation":false,"usgs":false,"family":"Morrison","given":"Scott","email":"","middleInitial":"A.","affiliations":[{"id":7041,"text":"The Nature Conservancy","active":true,"usgs":false}],"preferred":false,"id":348387,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Boyce, Walter M.","contributorId":75671,"corporation":false,"usgs":true,"family":"Boyce","given":"Walter","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":348386,"contributorType":{"id":1,"text":"Authors"},"rank":10}]}}
,{"id":70003306,"text":"70003306 - 2010 - Interacting parasites","interactions":[],"lastModifiedDate":"2021-05-24T16:04:16.116627","indexId":"70003306","displayToPublicDate":"2012-05-23T09:51:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3338,"text":"Science","active":true,"publicationSubtype":{"id":10}},"title":"Interacting parasites","docAbstract":"<p id=\"p-3\">Parasitism is the most popular life-style on Earth, and many vertebrates host more than one kind of parasite at a time. A common assumption is that parasite species rarely interact, because they often exploit different tissues in a host, and this use of discrete resources limits competition (<a id=\"xref-ref-1-1\" class=\"xref-bibr\" href=\"https://science.sciencemag.org/content/330/6001/187#ref-1\" data-mce-href=\"https://science.sciencemag.org/content/330/6001/187#ref-1\"><i>1</i></a>). On page<span>&nbsp;</span><a href=\"https://science.sciencemag.org/lookup/doi/10.1126/science.1190333\" data-mce-href=\"https://science.sciencemag.org/lookup/doi/10.1126/science.1190333\">243</a><span>&nbsp;</span>of this issue, however, Telfer<span>&nbsp;</span><i>et al.</i><span>&nbsp;</span>(<a id=\"xref-ref-2-1\" class=\"xref-bibr\" href=\"https://science.sciencemag.org/content/330/6001/187#ref-2\" data-mce-href=\"https://science.sciencemag.org/content/330/6001/187#ref-2\"><i>2</i></a>) provide a convincing case of a highly interactive parasite community in voles, and show how infection with one parasite can affect susceptibility to others. If some human parasites are equally interactive, our current, disease-by-disease approach to modeling and treating infectious diseases is inadequate (<a id=\"xref-ref-3-1\" class=\"xref-bibr\" href=\"https://science.sciencemag.org/content/330/6001/187#ref-3\" data-mce-href=\"https://science.sciencemag.org/content/330/6001/187#ref-3\"><i>3</i></a>).</p><p id=\"p-4\">Telfer<span>&nbsp;</span><i>et al.</i>'s study—which involved tracking infections of four different parasites by taking blood samples from nearly 6000 wild voles (<i>Microtus agrestis</i>) over 5 years—helps highlight our growing understanding of how parasites can interact in complex ways (see the figure). What are some of the take-home messages?</p>","language":"English","publisher":"American Association for the Advancement of Science","doi":"10.1126/science.1196915","usgsCitation":"Lafferty, K.D., 2010, Interacting parasites: Science, v. 330, no. 6001, p. 187-188, https://doi.org/10.1126/science.1196915.","productDescription":"2 p.","startPage":"187","endPage":"188","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":257070,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"330","issue":"6001","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505a3ca7e4b0c8380cd62f08","contributors":{"authors":[{"text":"Lafferty, Kevin D. 0000-0001-7583-4593 klafferty@usgs.gov","orcid":"https://orcid.org/0000-0001-7583-4593","contributorId":1415,"corporation":false,"usgs":true,"family":"Lafferty","given":"Kevin","email":"klafferty@usgs.gov","middleInitial":"D.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":346845,"contributorType":{"id":1,"text":"Authors"},"rank":1}]}}
,{"id":70004024,"text":"70004024 - 2010 - Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population","interactions":[],"lastModifiedDate":"2017-08-23T09:19:05","indexId":"70004024","displayToPublicDate":"2012-01-22T14:15:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1324,"text":"Conservation Genetics","active":true,"publicationSubtype":{"id":10}},"title":"Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population","docAbstract":"The threatened California Black Rail lives under dense marsh vegetation, is rarely observed, flies weakly and has a highly disjunct distribution. The largest population of rails is found in 8&ndash;10 large wetlands in San Francisco Bay (SF Bay), but a population was recently discovered in the foothills of the Sierra Nevada Mountains (Foothills), within a wetland network comprised of over 200 small marshes. Using microsatellite and mitochondrial analyses, our objectives were to determine the origins, connectivity and demography of this recently-discovered population. Analyses of individuals from the Foothills (<i>n</i> = 31), SF Bay (<i>n</i> = 31), the Imperial Valley (<i>n</i> = 6) and the East Coast (<i>n</i> = 3), combined with rigorous power evaluations, provided valuable insights into past history and current dynamics of the species in Northern California that challenge conventional wisdom about the species. The Foothills and SF Bay populations have diverged strongly from the Imperial Valley population, even more strongly than from individuals of the East Coast subspecies. The data also suggest a historical presence of the species in the Foothills. The SF Bay and Foothills populations had similar estimated effective population size over the areas sampled and appeared linked by a strongly asymmetrical migration pattern, with a greater probability of movement from the Foothills to SF Bay than vice versa. Random mating was inferred in the Foothills, but local substructure among marshes and inbreeding were detected in SF Bay, suggesting different dispersal patterns within each location. The unexpected dimensions of Black Rail demography and population structure suggested by these analyses and their potential importance for management are discussed.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Conservation Genetics","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Springer","publisherLocation":"Amsterdam, Netherlands","doi":"10.1007/s10592-010-0126-4","usgsCitation":"Girard, P., Takekawa, J.Y., and Beissinger, S.R., 2010, Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population: Conservation Genetics, v. 11, no. 6, p. 2409-2418, https://doi.org/10.1007/s10592-010-0126-4.","productDescription":"10 p.","startPage":"2409","endPage":"2418","numberOfPages":"10","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":475504,"rank":101,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s10592-010-0126-4","text":"Publisher Index Page"},{"id":204686,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":115741,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1007/s10592-010-0126-4","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"California","otherGeospatial":"San Francisco Bay;Sierra Nevada Mountains","volume":"11","issue":"6","noUsgsAuthors":false,"publicationDate":"2010-09-07","publicationStatus":"PW","scienceBaseUri":"505bbc29e4b08c986b328a8d","contributors":{"authors":[{"text":"Girard, Philippe","contributorId":98471,"corporation":false,"usgs":true,"family":"Girard","given":"Philippe","email":"","affiliations":[],"preferred":false,"id":350190,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Takekawa, John Y. 0000-0003-0217-5907 john_takekawa@usgs.gov","orcid":"https://orcid.org/0000-0003-0217-5907","contributorId":176168,"corporation":false,"usgs":true,"family":"Takekawa","given":"John","email":"john_takekawa@usgs.gov","middleInitial":"Y.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":false,"id":350189,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Beissinger, Steven R.","contributorId":100534,"corporation":false,"usgs":true,"family":"Beissinger","given":"Steven","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":350191,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70003734,"text":"70003734 - 2010 - Thresholds in forest bird occurrence as a function of the amount of early-seral broadleaf forest at landscape scales","interactions":[],"lastModifiedDate":"2012-02-02T00:16:02","indexId":"70003734","displayToPublicDate":"2012-01-08T15:30:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1450,"text":"Ecological Applications","active":true,"publicationSubtype":{"id":10}},"title":"Thresholds in forest bird occurrence as a function of the amount of early-seral broadleaf forest at landscape scales","docAbstract":"Recent declines in broadleaf-dominated, early-seral forest globally as a function of intensive forest management and/or fire suppression have raised concern about the viability of populations dependent on such forest types. However, quantitative information about the strength and direction of species associations with broadleaf cover at landscape scales are rare. Uncovering such habitat relationships is essential for understanding the demography of species and in developing sound conservation strategies. It is particularly important to detect points in habitat reduction where rates of population decline may accelerate or the likelihood of species occurrence drops rapidly (i.e., thresholds). Here, we use a large avian point-count data set (<i>N</i> = 4375) from southwestern and northwestern Oregon along with segmented logistic regression to test for thresholds in forest bird occurrence as a function of broadleaf forest and early-seral broadleaf forest at local (150-m radius) and landscape (500&ndash;2000-m radius) scales. All 12 bird species examined showed positive responses to either broadleaf forest in general, and/or early-seral broadleaf forest. However, regional variation in species response to these conditions was high. We found considerable evidence for landscape thresholds in bird species occurrence as a function of broadleaf cover; threshold models received substantially greater support than linear models for eight of 12 species. Landscape thresholds in broadleaf forest ranged broadly from 1.35% to 24.55% mean canopy cover. Early-seral broadleaf thresholds tended to be much lower (0.22&ndash;1.87%). We found a strong negative relationship between the strength of species association with early-seral broadleaf forest and 42-year bird population trends; species most associated with this forest type have declined at the greatest rates. Taken together, these results provide the first support for the hypothesis that reductions in broadleaf-dominated early-seral forest due to succession and intensive forest management have led to population declines of constituent species in the Pacific northwestern United States. Forest management treatments that maintain or restore even small amounts of broadleaf vegetation could mitigate further declines.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Ecological Applications","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Ecological Society of America","publisherLocation":"Ithaca, NY","doi":"10.1890/09-1305.1","usgsCitation":"Betts, M., Hagar, J., Rivers, J., Alexander, J., McGarigal, K., and McComb, B., 2010, Thresholds in forest bird occurrence as a function of the amount of early-seral broadleaf forest at landscape scales: Ecological Applications, v. 20, no. 8, p. 2116-2130, https://doi.org/10.1890/09-1305.1.","productDescription":"15 p.","startPage":"2116","endPage":"2130","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":112480,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://dx.doi.org/10.1890/09-1305.1","linkFileType":{"id":5,"text":"html"}},{"id":204275,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Oregon","volume":"20","issue":"8","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bb355e4b08c986b325d1e","contributors":{"authors":[{"text":"Betts, M.G.","contributorId":58386,"corporation":false,"usgs":true,"family":"Betts","given":"M.G.","email":"","affiliations":[],"preferred":false,"id":348576,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hagar, J.C.","contributorId":46208,"corporation":false,"usgs":true,"family":"Hagar","given":"J.C.","affiliations":[],"preferred":false,"id":348575,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Rivers, J.W.","contributorId":63151,"corporation":false,"usgs":true,"family":"Rivers","given":"J.W.","email":"","affiliations":[],"preferred":false,"id":348577,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Alexander, J.D.","contributorId":16562,"corporation":false,"usgs":true,"family":"Alexander","given":"J.D.","email":"","affiliations":[],"preferred":false,"id":348574,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"McGarigal, K.","contributorId":7831,"corporation":false,"usgs":true,"family":"McGarigal","given":"K.","email":"","affiliations":[],"preferred":false,"id":348573,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"McComb, B.C.","contributorId":102196,"corporation":false,"usgs":true,"family":"McComb","given":"B.C.","email":"","affiliations":[],"preferred":false,"id":348578,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70003710,"text":"70003710 - 2010 - Thermomagmatic evolution of Mesoproterozoic crust in the Blue Ridge of SW Virginia and NW North Carolina: Evidence from U-Pb geochronology and zircon geothermometry","interactions":[],"lastModifiedDate":"2012-02-02T00:16:01","indexId":"70003710","displayToPublicDate":"2012-01-08T15:04:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1726,"text":"GSA Memoirs","active":true,"publicationSubtype":{"id":10}},"title":"Thermomagmatic evolution of Mesoproterozoic crust in the Blue Ridge of SW Virginia and NW North Carolina: Evidence from U-Pb geochronology and zircon geothermometry","docAbstract":"New geologic mapping, petrology, and U-Pb geochronology indicate that Mesoproterozoic crust near Mount Rogers consists of felsic to mafic meta-igneous rocks emplaced over 260 m.y. The oldest rocks are compositionally diverse and migmatitic, whereas younger granitoids are porphyritic to porphyroclastic. Cathodoluminescence imaging indicates that zircon from four representative units preserves textural evidence of multiple episodes of growth, including domains of igneous, metamorphic, and inherited origin. Sensitive high-resolution ion microprobe (SHRIMP) trace-element analyses indicate that metamorphic zircon is characterized by lower Th/U, higher Yb/Gd, and lower overall rare earth element (REE) concentrations than igneous zircon. SHRIMP U-Pb isotopic analyses of zircon define three episodes of magmatism: 1327 &plusmn; 7 Ma, 1180&ndash;1155 Ma, and 1061 &plusmn; 5 Ma. Crustal recycling is recorded by inherited igneous cores of 1.33&ndash;1.29 Ga age in 1161 &plusmn; 7 Ma meta-monzogranite. Overlapping ages of igneous and metamorphic crystallization indicate that plutons of ca. 1170 and 1060 Ma age were emplaced during episodes of regional heating. Local development of hornblende + plagioclase + quartz &plusmn; clinopyroxene indicates that prograde metamorphism at 1170&ndash;1145 Ma and 1060&ndash;1020 Ma reached upper-amphibolite-facies conditions, with temperatures estimated using Ti-in-zircon geothermometry at ~740 &plusmn; 40 &deg;C during both episodes. The chemical composition of 1327 &plusmn; 7 Ma orthogranofels from migmatite preserves the first evidence of arc-generated rocks in the Blue Ridge, indicating a subduction-related environment that may have been comparable to similar-age systems in inliers of the Northern Appalachians and the Composite Arc belt of Canada. Granitic magmatism at 1180&ndash;1155 Ma and ca. 1060 Ma near Mount Rogers was contemporaneous with anorthosite-mangerite-charnockite-granite (AMCG) plutonism in the Northern Appalachian inliers and Canadian Grenville Province. Metamorphism at ca. 1160 and 1060 Ma correlates temporally with the Shawinigan orogeny and Ottawan phase of the Grenvillian orogeny, respectively, suggesting that the Blue Ridge was part of Rodinia dating back to ca. 1180 Ma.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"GSA Memoirs","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Geological Society of America","publisherLocation":"Boulder, CO","usgsCitation":"Tollo, R.P., Aleinikoff, J.N., Wooden, J., Mazdab, F.K., Southworth, S., and Fanning, M.C., 2010, Thermomagmatic evolution of Mesoproterozoic crust in the Blue Ridge of SW Virginia and NW North Carolina: Evidence from U-Pb geochronology and zircon geothermometry: GSA Memoirs, v. 206, p. 589-596.","productDescription":"8 p.","startPage":"589","endPage":"596","numberOfPages":"38","costCenters":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"links":[{"id":112479,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://memoirs.gsapubs.org/content/206/859.short","linkFileType":{"id":5,"text":"html"}},{"id":204274,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"North Carolina;Virginia","volume":"206","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505bb28be4b08c986b325886","contributors":{"authors":[{"text":"Tollo, Richard P.","contributorId":6465,"corporation":false,"usgs":true,"family":"Tollo","given":"Richard","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":348426,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Aleinikoff, John N. 0000-0003-3494-6841 jaleinikoff@usgs.gov","orcid":"https://orcid.org/0000-0003-3494-6841","contributorId":1478,"corporation":false,"usgs":true,"family":"Aleinikoff","given":"John","email":"jaleinikoff@usgs.gov","middleInitial":"N.","affiliations":[{"id":171,"text":"Central Mineral and Environmental Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":348425,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Wooden, Joseph L.","contributorId":32209,"corporation":false,"usgs":true,"family":"Wooden","given":"Joseph L.","affiliations":[],"preferred":false,"id":348427,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Mazdab, Frank K.","contributorId":37468,"corporation":false,"usgs":true,"family":"Mazdab","given":"Frank","email":"","middleInitial":"K.","affiliations":[],"preferred":false,"id":348428,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Southworth, Scott","contributorId":93933,"corporation":false,"usgs":true,"family":"Southworth","given":"Scott","affiliations":[],"preferred":false,"id":348430,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Fanning, Mark C.","contributorId":53080,"corporation":false,"usgs":true,"family":"Fanning","given":"Mark","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":348429,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70003902,"text":"70003902 - 2010 - Flying over an infected landscape: Distribution of highly pathogenic avian influenza H5N1 risk in South Asia and satellite tracking of wild waterfowl","interactions":[],"lastModifiedDate":"2017-08-30T11:49:52","indexId":"70003902","displayToPublicDate":"2012-01-01T16:14:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1443,"text":"EcoHealth","active":true,"publicationSubtype":{"id":10}},"title":"Flying over an infected landscape: Distribution of highly pathogenic avian influenza H5N1 risk in South Asia and satellite tracking of wild waterfowl","docAbstract":"Highly pathogenic avian influenza (HPAI) H5N1 virus persists in Asia, posing a threat to poultry, wild birds, and humans. Previous work in Southeast Asia demonstrated that HPAI H5N1 risk is related to domestic ducks and people. Other studies discussed the role of migratory birds in the long distance spread of HPAI H5N1. However, the interplay between local persistence and long-distance dispersal has never been studied. We expand previous geospatial risk analysis to include South and Southeast Asia, and integrate the analysis with migration data of satellite-tracked wild waterfowl along the Central Asia flyway. We find that the population of domestic duck is the main factor delineating areas at risk of HPAI H5N1 spread in domestic poultry in South Asia, and that other risk factors, such as human population and chicken density, are associated with HPAI H5N1 risk within those areas. We also find that satellite tracked birds (Ruddy Shelduck and two Bar-headed Geese) reveal a direct spatio-temporal link between the HPAI H5N1 hot-spots identified in India and Bangladesh through our risk model, and the wild bird outbreaks in May,June,July 2009 in China(Qinghai Lake), Mongolia, and Russia. This suggests that the continental-scale dynamics of HPAI H5N1 are structured as a number of persistence areas delineated by domestic ducks, connected by rare transmission through migratory waterfowl.","language":"English","publisher":"Springer","publisherLocation":"Amsterdam, Netherlands","doi":"10.1007/s10393-010-0672-8","usgsCitation":"Gilbert, M., Newman, S.H., Takekawa, J.Y., Loth, L., Biradar, C., Prosser, D.J., Balachandran, S., Rao, M.V., Mundkur, T., Yan, B., Xing, Z., Hou, Y., Batbayar, N., Tseveenmayadag, N., Hogerwerf, L., Slingenbergh, J., and Xiao, X., 2010, Flying over an infected landscape: Distribution of highly pathogenic avian influenza H5N1 risk in South Asia and satellite tracking of wild waterfowl: EcoHealth, v. 7, no. 4, p. 448-458, https://doi.org/10.1007/s10393-010-0672-8.","productDescription":"11 p.","startPage":"448","endPage":"458","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":475512,"rank":10000,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/s10393-010-0672-8","text":"Publisher Index Page"},{"id":257581,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":257578,"rank":9999,"type":{"id":10,"text":"Digital Object Identifier"},"url":"https://dx.doi.org/10.1007/s10393-010-0672-8","linkFileType":{"id":5,"text":"html"}}],"otherGeospatial":"Asia","volume":"7","issue":"4","noUsgsAuthors":false,"publicationDate":"2011-01-26","publicationStatus":"PW","scienceBaseUri":"505a12aae4b0c8380cd543c1","contributors":{"authors":[{"text":"Gilbert, Marius","contributorId":61148,"corporation":false,"usgs":true,"family":"Gilbert","given":"Marius","email":"","affiliations":[],"preferred":false,"id":349392,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Newman, Scott H.","contributorId":101372,"corporation":false,"usgs":true,"family":"Newman","given":"Scott","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":349401,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Takekawa, John Y. 0000-0003-0217-5907 john_takekawa@usgs.gov","orcid":"https://orcid.org/0000-0003-0217-5907","contributorId":176168,"corporation":false,"usgs":true,"family":"Takekawa","given":"John","email":"john_takekawa@usgs.gov","middleInitial":"Y.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":false,"id":349386,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Loth, Leo","contributorId":65710,"corporation":false,"usgs":true,"family":"Loth","given":"Leo","email":"","affiliations":[],"preferred":false,"id":349394,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Biradar, Chandrashekhar","contributorId":30863,"corporation":false,"usgs":true,"family":"Biradar","given":"Chandrashekhar","affiliations":[],"preferred":false,"id":349389,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Prosser, Diann J. 0000-0002-5251-1799 dprosser@usgs.gov","orcid":"https://orcid.org/0000-0002-5251-1799","contributorId":2389,"corporation":false,"usgs":true,"family":"Prosser","given":"Diann","email":"dprosser@usgs.gov","middleInitial":"J.","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":349387,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Balachandran, Sivananinthaperumal","contributorId":20593,"corporation":false,"usgs":true,"family":"Balachandran","given":"Sivananinthaperumal","affiliations":[],"preferred":false,"id":349388,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Rao, Mandava Venkata Subba","contributorId":76179,"corporation":false,"usgs":true,"family":"Rao","given":"Mandava","email":"","middleInitial":"Venkata Subba","affiliations":[],"preferred":false,"id":349397,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Mundkur, Taej","contributorId":107843,"corporation":false,"usgs":true,"family":"Mundkur","given":"Taej","affiliations":[],"preferred":false,"id":349402,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Yan, Baoping","contributorId":76871,"corporation":false,"usgs":true,"family":"Yan","given":"Baoping","affiliations":[],"preferred":false,"id":349398,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Xing, Zhi","contributorId":61958,"corporation":false,"usgs":true,"family":"Xing","given":"Zhi","email":"","affiliations":[],"preferred":false,"id":349393,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Hou, Yuansheng","contributorId":80400,"corporation":false,"usgs":true,"family":"Hou","given":"Yuansheng","email":"","affiliations":[],"preferred":false,"id":349399,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Batbayar, Nyambayar","contributorId":40338,"corporation":false,"usgs":true,"family":"Batbayar","given":"Nyambayar","affiliations":[],"preferred":false,"id":349391,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Tseveenmayadag, Natsagdorj","contributorId":38000,"corporation":false,"usgs":true,"family":"Tseveenmayadag","given":"Natsagdorj","affiliations":[],"preferred":false,"id":349390,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Hogerwerf, Lenny","contributorId":70106,"corporation":false,"usgs":true,"family":"Hogerwerf","given":"Lenny","email":"","affiliations":[],"preferred":false,"id":349396,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Slingenbergh, Jan","contributorId":83261,"corporation":false,"usgs":true,"family":"Slingenbergh","given":"Jan","email":"","affiliations":[],"preferred":false,"id":349400,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Xiao, Xiangming","contributorId":67212,"corporation":false,"usgs":true,"family":"Xiao","given":"Xiangming","affiliations":[],"preferred":false,"id":349395,"contributorType":{"id":1,"text":"Authors"},"rank":17}]}}
,{"id":70003570,"text":"70003570 - 2010 - Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies","interactions":[],"lastModifiedDate":"2021-01-18T12:38:42.145805","indexId":"70003570","displayToPublicDate":"2011-12-01T11:36:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1465,"text":"Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies","docAbstract":"<p><span>We develop a hierarchical capture–recapture model for demographically open populations when auxiliary spatial information about location of capture is obtained. Such spatial capture–recapture data arise from studies based on camera trapping, DNA sampling, and other situations in which a spatial array of devices records encounters of unique individuals. We integrate an individual‐based formulation of a Jolly‐Seber type model with recently developed spatially explicit capture–recapture models to estimate density and demographic parameters for survival and recruitment. We adopt a Bayesian framework for inference under this model using the method of data augmentation which is implemented in the software program WinBUGS. The model was motivated by a camera trapping study of Pampas cats Leopardus colocolo from Argentina, which we present as an illustration of the model in this paper. We provide estimates of density and the first quantitative assessment of vital rates for the Pampas cat in the High Andes. The precision of these estimates is poor due likely to the sparse data set. Unlike conventional inference methods which usually rely on asymptotic arguments, Bayesian inferences are valid in arbitrary sample sizes, and thus the method is ideal for the study of rare or endangered species for which small data sets are typical.</span></p>","language":"English","publisher":"Ecological Society of America","doi":"10.1890/09-0804.1","usgsCitation":"Gardner, B., Reppucci, J., Lucherini, M., and Royle, J., 2010, Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies: Ecology, v. 91, no. 11, p. 3376-3383, https://doi.org/10.1890/09-0804.1.","productDescription":"8 p.","startPage":"3376","endPage":"3383","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":475558,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.1890/09-0804.1","text":"External Repository"},{"id":382188,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"91","issue":"11","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"505b94c5e4b08c986b31ac39","contributors":{"authors":[{"text":"Gardner, Beth","contributorId":91612,"corporation":false,"usgs":false,"family":"Gardner","given":"Beth","affiliations":[{"id":13553,"text":"University of Washington-Seattle","active":true,"usgs":false}],"preferred":false,"id":347805,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Reppucci, Juan","contributorId":24487,"corporation":false,"usgs":true,"family":"Reppucci","given":"Juan","email":"","affiliations":[],"preferred":false,"id":347802,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Lucherini, Mauro","contributorId":24488,"corporation":false,"usgs":true,"family":"Lucherini","given":"Mauro","email":"","affiliations":[],"preferred":false,"id":347803,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Royle, J. Andrew 0000-0003-3135-2167","orcid":"https://orcid.org/0000-0003-3135-2167","contributorId":80808,"corporation":false,"usgs":true,"family":"Royle","given":"J. Andrew","affiliations":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"preferred":true,"id":347804,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70003540,"text":"70003540 - 2010 - Recent ecological divergence despite migration in sockeye salmon (<i>Oncorhynchus nerka</i>)","interactions":[],"lastModifiedDate":"2021-01-15T14:02:37.029124","indexId":"70003540","displayToPublicDate":"2011-11-16T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1598,"text":"Evolution","active":true,"publicationSubtype":{"id":10}},"title":"Recent ecological divergence despite migration in sockeye salmon (<i>Oncorhynchus nerka</i>)","docAbstract":"<p><span>Ecological divergence may result when populations experience different selection regimes, but there is considerable discussion about the role of migration at the beginning stages of divergence before reproductive isolating mechanisms have evolved. However, detection of past migration is difficult in current populations and tools to differentiate genetic similarities due to migration versus recent common ancestry are only recently available. Using past volcanic eruption times as a framework, we combine morphological analyses of traits important to reproduction with a coalescent‐based genetic analysis of two proximate sockeye salmon (</span><i>Oncorhynchus nerka</i><span>) populations. We find that this is the most recent (∼500 years, 100 generations) natural ecological divergence recorded in a fish species, and report that this divergence is occurring despite migration. Although studies of fish divergence following the retreat of glaciers (10,000–15,000 years ago) have contributed extensively to our understanding of speciation, the Aniakchak system of sockeye salmon provides a rare example of the initial stages of ecological divergence following natural colonization. Our results show that even in the face of continued migration, populations may diverge in the absence of a physical barrier.</span></p>","language":"English","publisher":"Society for the Study of Evolution","doi":"10.1111/j.1558-5646.2009.00927.x","usgsCitation":"Pavey, S.A., Nielsen, J.L., and Hamon, T.R., 2010, Recent ecological divergence despite migration in sockeye salmon (<i>Oncorhynchus nerka</i>): Evolution, v. 64, no. 6, p. 1773-1783, https://doi.org/10.1111/j.1558-5646.2009.00927.x.","productDescription":"11 p.","startPage":"1773","endPage":"1783","costCenters":[{"id":116,"text":"Alaska Science Center Biology MFEB","active":true,"usgs":true}],"links":[{"id":475562,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/j.1558-5646.2009.00927.x","text":"Publisher Index Page"},{"id":382216,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United  States","state":"Alaska","otherGeospatial":"Aniakchak Caldera","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -158.642578125,\n              56.36525013685609\n            ],\n            [\n              -156.181640625,\n              56.36525013685609\n            ],\n            [\n              -156.181640625,\n              58.07787626787517\n            ],\n            [\n              -158.642578125,\n              58.07787626787517\n            ],\n            [\n              -158.642578125,\n              56.36525013685609\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"64","issue":"6","noUsgsAuthors":false,"publicationDate":"2009-12-17","publicationStatus":"PW","scienceBaseUri":"4f4e4ad6e4b07f02db683e4b","contributors":{"authors":[{"text":"Pavey, Scott A.","contributorId":31516,"corporation":false,"usgs":true,"family":"Pavey","given":"Scott","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":347685,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Nielsen, Jennifer L.","contributorId":43722,"corporation":false,"usgs":true,"family":"Nielsen","given":"Jennifer","email":"","middleInitial":"L.","affiliations":[{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":347686,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Hamon, Troy R.","contributorId":107419,"corporation":false,"usgs":true,"family":"Hamon","given":"Troy","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":347687,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70004551,"text":"70004551 - 2010 - Deterring off-trail hiking in protected natural areas: Evaluating options with surveys and unobtrusive observation: Final report","interactions":[],"lastModifiedDate":"2012-02-02T00:15:52","indexId":"70004551","displayToPublicDate":"2011-09-05T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":9,"text":"Other Report"},"seriesTitle":{"id":404,"text":"Final Management Report","active":false,"publicationSubtype":{"id":9}},"title":"Deterring off-trail hiking in protected natural areas: Evaluating options with surveys and unobtrusive observation: Final report","docAbstract":"This report presents the results of research conducted on the 96-acre Bear Island along the Billy Goat Trail, Section A (BGT) that evaluated visitor motivations for off-trail hiking and the efficacy of four treatments designed to reduce this activity. This research was prompted by concerns about the impact of an extensive informal (visitor-created) trail network on Bear Island, because it provides habitat for more than 50 species of rare, threatened or endangered plant and animal species.","language":"English","publisher":"Virginia Tech College of Natural Resources, Forestry/Recreation Resources Management","publisherLocation":"Blacksburg, Virginia","usgsCitation":"Hockett, K., Clark, Y., Leung, J., Marion, and Park, L., 2010, Deterring off-trail hiking in protected natural areas: Evaluating options with surveys and unobtrusive observation: Final report: Final Management Report.","numberOfPages":"189","costCenters":[{"id":531,"text":"Patuxent Wildlife Research Center","active":true,"usgs":true}],"links":[{"id":203982,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":21837,"rank":200,"type":{"id":11,"text":"Document"},"url":"https://www.pwrc.usgs.gov/prodabs/pubpdfs/7495_Hockett.pdf","linkFileType":{"id":5,"text":"html"}}],"country":"United States","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4aa8e4b07f02db667395","contributors":{"authors":[{"text":"Hockett, K.A.","contributorId":57583,"corporation":false,"usgs":true,"family":"Hockett","given":"K.A.","email":"","affiliations":[],"preferred":false,"id":350702,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Clark, Y.F.","contributorId":8601,"corporation":false,"usgs":true,"family":"Clark","given":"Y.F.","email":"","affiliations":[],"preferred":false,"id":350700,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Leung, J.L.","contributorId":65594,"corporation":false,"usgs":true,"family":"Leung","given":"J.L.","email":"","affiliations":[],"preferred":false,"id":350703,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Marion","contributorId":128188,"corporation":true,"usgs":false,"organization":"Marion","id":535127,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Park, L.","contributorId":36269,"corporation":false,"usgs":true,"family":"Park","given":"L.","email":"","affiliations":[],"preferred":false,"id":350701,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70003692,"text":"70003692 - 2010 - Effects of urbanization on carnivore species distribution and richness","interactions":[],"lastModifiedDate":"2012-02-02T00:15:56","indexId":"70003692","displayToPublicDate":"2011-08-22T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2373,"text":"Journal of Mammalogy","onlineIssn":"1545-1542","printIssn":"0022-2372","active":true,"publicationSubtype":{"id":10}},"title":"Effects of urbanization on carnivore species distribution and richness","docAbstract":"Urban development can have multiple effects on mammalian carnivore communities. We conducted a meta-analysis of 7,929 photographs from 217 localities in 11 camera-trap studies across coastal southern California to describe habitat use and determine the effects of urban proximity (distance to urban edge) and intensity (percentage of area urbanized) on carnivore occurrence and species richness in natural habitats close to the urban boundary. Coyotes (Canis latrans) and bobcats (Lynx rufus) were distributed widely across the region. Domestic dogs (Canis lupus familiaris), striped skunks (Mephitis mephitis), raccoons (Procyon lotor), gray foxes (Urocyon cinereoargenteus), mountain lions (Puma concolor), and Virginia opossums (Didelphis virginiana) were detected less frequently, and long-tailed weasels (Mustela frenata), American badgers (Taxidea taxus), western spotted skunks (Spilogale gracilis), and domestic cats (Felis catus) were detected rarely. Habitat use generally reflected availability for most species. Coyote and raccoon occurrence increased with both proximity to and intensity of urbanization, whereas bobcat, gray fox, and mountain lion occurrence decreased with urban proximity and intensity. Domestic dogs and Virginia opossums exhibited positive and weak negative relationships, respectively, with urban intensity but were unaffected by urban proximity. Striped skunk occurrence increased with urban proximity but decreased with urban intensity. Native species richness was negatively associated with urban intensity but not urban proximity, probably because of the stronger negative response of individual species to urban intensity.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Journal of Mammalogy","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"American Society of Mammalogists","usgsCitation":"Ordenana, M.A., Crooks, K.R., Boydston, E.E., Fisher, R.N., Lyren, L.M., Siudyla, S., Haas, C.D., Harris, S., Hathaway, S.A., Turschak, G.M., Miles, A.K., and Van Vuren, D., 2010, Effects of urbanization on carnivore species distribution and richness: Journal of Mammalogy, v. 91, no. 6, p. 1322-1331.","productDescription":"10 p.","startPage":"1322","endPage":"1331","numberOfPages":"10","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":203972,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":91774,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://www.bioone.org/doi/abs/10.1644/09-MAMM-A-312.1","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"California","volume":"91","issue":"6","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a26e4b07f02db60fe68","contributors":{"authors":[{"text":"Ordenana, Miguel A.","contributorId":67366,"corporation":false,"usgs":true,"family":"Ordenana","given":"Miguel","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":348365,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Crooks, Kevin R.","contributorId":51137,"corporation":false,"usgs":false,"family":"Crooks","given":"Kevin","email":"","middleInitial":"R.","affiliations":[{"id":6621,"text":"Colorado State University","active":true,"usgs":false}],"preferred":false,"id":348363,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Boydston, Erin E. 0000-0002-8452-835X eboydston@usgs.gov","orcid":"https://orcid.org/0000-0002-8452-835X","contributorId":1705,"corporation":false,"usgs":true,"family":"Boydston","given":"Erin","email":"eboydston@usgs.gov","middleInitial":"E.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348358,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Fisher, Robert N. 0000-0002-2956-3240 rfisher@usgs.gov","orcid":"https://orcid.org/0000-0002-2956-3240","contributorId":1529,"corporation":false,"usgs":true,"family":"Fisher","given":"Robert","email":"rfisher@usgs.gov","middleInitial":"N.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348357,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Lyren, Lisa M. llyren@usgs.gov","contributorId":2398,"corporation":false,"usgs":true,"family":"Lyren","given":"Lisa","email":"llyren@usgs.gov","middleInitial":"M.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348359,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Siudyla, Shalene","contributorId":28867,"corporation":false,"usgs":true,"family":"Siudyla","given":"Shalene","email":"","affiliations":[],"preferred":false,"id":348362,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Haas, Christopher D.","contributorId":54076,"corporation":false,"usgs":true,"family":"Haas","given":"Christopher","email":"","middleInitial":"D.","affiliations":[],"preferred":false,"id":348364,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Harris, Sierra","contributorId":93773,"corporation":false,"usgs":true,"family":"Harris","given":"Sierra","email":"","affiliations":[],"preferred":false,"id":348367,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Hathaway, Stacie A. 0000-0002-4167-8059 sahathaway@usgs.gov","orcid":"https://orcid.org/0000-0002-4167-8059","contributorId":3420,"corporation":false,"usgs":true,"family":"Hathaway","given":"Stacie","email":"sahathaway@usgs.gov","middleInitial":"A.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348360,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Turschak, Greta M.","contributorId":24641,"corporation":false,"usgs":true,"family":"Turschak","given":"Greta","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":348361,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Miles, A. Keith 0000-0002-3108-808X keith_miles@usgs.gov","orcid":"https://orcid.org/0000-0002-3108-808X","contributorId":196,"corporation":false,"usgs":true,"family":"Miles","given":"A.","email":"keith_miles@usgs.gov","middleInitial":"Keith","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348356,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Van Vuren, Dirk H.","contributorId":89408,"corporation":false,"usgs":true,"family":"Van Vuren","given":"Dirk H.","affiliations":[],"preferred":false,"id":348366,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70003467,"text":"70003467 - 2010 - High tsunami frequency as a result of combined strike-slip faulting and coastal landslides","interactions":[],"lastModifiedDate":"2012-02-02T00:15:52","indexId":"70003467","displayToPublicDate":"2011-08-04T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2845,"text":"Nature Geoscience","active":true,"publicationSubtype":{"id":10}},"title":"High tsunami frequency as a result of combined strike-slip faulting and coastal landslides","docAbstract":"Earthquakes on strike-slip faults can produce devastating natural hazards. However, because they consist predominantly of lateral motion, these faults are rarely associated with significant uplift or tsunami generation. And although submarine slides can generate tsunami, only a few per cent of all tsunami are believed to be triggered in this way. The 12 January M<sub>w</sub> 7.0 Haiti earthquake exhibited primarily strike-slip motion but nevertheless generated a tsunami. Here we present data from a comprehensive field survey that covered the onshore and offshore area around the epicentre to document that modest uplift together with slope failure caused tsunamigenesis. Submarine landslides caused the most severe tsunami locally. Our analysis suggests that slide-generated tsunami occur an order-of-magnitude more frequently along the Gonave microplate than global estimates predict. Uplift was generated because of the earthquake's location, where the Caribbean and Gonave microplates collide obliquely. The earthquake also caused liquefaction at several river deltas that prograde rapidly and are prone to failure. We conclude that coastal strike-slip fault systems such as the Enriquillo-Plantain Garden fault produce relief conducive to rapid sedimentation, erosion and slope failure, so that even modest predominantly strike-slip earthquakes can cause potentially catastrophic slide-generated tsunami - a risk that is underestimated at present.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Nature Geoscience","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Nature Publishing Group","publisherLocation":"New York, NY","usgsCitation":"Hornbach, M.J., Braudy, N., Briggs, R., Cormier, M., Davis, M.B., Diebold, J.B., Dieudonne, N., Douilly, R., Frohlich, C., Gulick, S.P., Johnson, H.E., Mann, P., McHugh, C., Ryan-Mishkin, K., Prentice, C.S., Seeber, L., Sorlien, C., Steckler, M.S., Symithe, S.J., Taylor, F.W., and Templeton, J., 2010, High tsunami frequency as a result of combined strike-slip faulting and coastal landslides: Nature Geoscience, v. 3, p. 783-788.","productDescription":"6 p.","startPage":"783","endPage":"788","costCenters":[{"id":300,"text":"Geologic Hazards Science Center","active":true,"usgs":true}],"links":[{"id":204075,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":24514,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://www.nature.com/ngeo/journal/v3/n11/full/ngeo975.html","linkFileType":{"id":5,"text":"html"}}],"volume":"3","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a60e4b07f02db6353a3","contributors":{"authors":[{"text":"Hornbach, Matthew J.","contributorId":14258,"corporation":false,"usgs":true,"family":"Hornbach","given":"Matthew","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":347381,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Braudy, Nicole","contributorId":32782,"corporation":false,"usgs":true,"family":"Braudy","given":"Nicole","email":"","affiliations":[],"preferred":false,"id":347384,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Briggs, Richard W.","contributorId":94027,"corporation":false,"usgs":true,"family":"Briggs","given":"Richard W.","affiliations":[],"preferred":false,"id":347397,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Cormier, Marie-Helene","contributorId":79765,"corporation":false,"usgs":true,"family":"Cormier","given":"Marie-Helene","email":"","affiliations":[],"preferred":false,"id":347394,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Davis, Marcy B.","contributorId":57728,"corporation":false,"usgs":true,"family":"Davis","given":"Marcy","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":347389,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Diebold, John B.","contributorId":66551,"corporation":false,"usgs":true,"family":"Diebold","given":"John","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":347391,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Dieudonne, Nicole","contributorId":23817,"corporation":false,"usgs":true,"family":"Dieudonne","given":"Nicole","email":"","affiliations":[],"preferred":false,"id":347382,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Douilly, Roby","contributorId":68173,"corporation":false,"usgs":true,"family":"Douilly","given":"Roby","email":"","affiliations":[],"preferred":false,"id":347392,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Frohlich, Cliff","contributorId":96541,"corporation":false,"usgs":true,"family":"Frohlich","given":"Cliff","affiliations":[],"preferred":false,"id":347399,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Gulick, Sean P.S.","contributorId":101151,"corporation":false,"usgs":true,"family":"Gulick","given":"Sean","email":"","middleInitial":"P.S.","affiliations":[],"preferred":false,"id":347400,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Johnson, Harold E. III","contributorId":47470,"corporation":false,"usgs":true,"family":"Johnson","given":"Harold","suffix":"III","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":347386,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Mann, Paul","contributorId":57729,"corporation":false,"usgs":true,"family":"Mann","given":"Paul","email":"","affiliations":[],"preferred":false,"id":347390,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"McHugh, Cecilia","contributorId":32783,"corporation":false,"usgs":true,"family":"McHugh","given":"Cecilia","email":"","affiliations":[],"preferred":false,"id":347385,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Ryan-Mishkin, Katherine","contributorId":95335,"corporation":false,"usgs":true,"family":"Ryan-Mishkin","given":"Katherine","email":"","affiliations":[],"preferred":false,"id":347398,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Prentice, Carol S. 0000-0003-3732-3551 cprentice@usgs.gov","orcid":"https://orcid.org/0000-0003-3732-3551","contributorId":2676,"corporation":false,"usgs":true,"family":"Prentice","given":"Carol","email":"cprentice@usgs.gov","middleInitial":"S.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true}],"preferred":true,"id":347380,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Seeber, Leonardo","contributorId":81133,"corporation":false,"usgs":true,"family":"Seeber","given":"Leonardo","email":"","affiliations":[],"preferred":false,"id":347396,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Sorlien, Christopher C.","contributorId":78813,"corporation":false,"usgs":true,"family":"Sorlien","given":"Christopher C.","affiliations":[],"preferred":false,"id":347393,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Steckler, Michael S.","contributorId":80967,"corporation":false,"usgs":true,"family":"Steckler","given":"Michael","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":347395,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Symithe, Steeve Julien","contributorId":52456,"corporation":false,"usgs":true,"family":"Symithe","given":"Steeve","email":"","middleInitial":"Julien","affiliations":[],"preferred":false,"id":347388,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Taylor, Frederick W.","contributorId":48831,"corporation":false,"usgs":true,"family":"Taylor","given":"Frederick","email":"","middleInitial":"W.","affiliations":[],"preferred":false,"id":347387,"contributorType":{"id":1,"text":"Authors"},"rank":20},{"text":"Templeton, John","contributorId":28128,"corporation":false,"usgs":true,"family":"Templeton","given":"John","email":"","affiliations":[],"preferred":false,"id":347383,"contributorType":{"id":1,"text":"Authors"},"rank":21}]}}
,{"id":70003801,"text":"70003801 - 2010 - Habitat suitability and conservation of the giant gartersnake (Thamnophis gigas) in the Sacramento Valley of California","interactions":[],"lastModifiedDate":"2012-02-02T00:15:51","indexId":"70003801","displayToPublicDate":"2011-08-02T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1337,"text":"Copeia","active":true,"publicationSubtype":{"id":10}},"title":"Habitat suitability and conservation of the giant gartersnake (Thamnophis gigas) in the Sacramento Valley of California","docAbstract":"Resource managers often have little information regarding the habitat requirements and distribution of rare species. Factor analysis-based habitat suitability models describe the ecological niche of a species and identify locations where these conditions occur on the landscape using existing occurrence data.We used factor analyses to assess the suitability of habitats for Thamnophis gigas (Giant Gartersnake), a rare, threatened species endemic to the Central Valley of California, USA, and to map the locations of habitat suitable for T. gigas in the Sacramento Valley. Factor analyses indicated that the niche of T. gigas is composed of sites near rice agriculture with low stream densities. Sites with high canal densities and near wetlands also appeared suitable, but results for these variables were sensitive to potential sampling bias. In the Sacramento Valley, suitable habitats occur primarily in the central portion of the valley floor. Based upon the results of the factor analyses, recovery planning for T. gigas will require an on-the-ground assessment of the current distribution and abundance of T. gigas, maintaining the few remaining natural wetlands and the practice of rice agriculture in the Sacramento Valley, and studying the effects of agricultural practices and land use changes on populations of T. gigas.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Copeia","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"American Society of Ichthyologists and Herpetologists","publisherLocation":"Lawrence, KS","usgsCitation":"Halstead, B., Wylie, G.D., and Casazza, M.L., 2010, Habitat suitability and conservation of the giant gartersnake (Thamnophis gigas) in the Sacramento Valley of California: Copeia, v. 2010, no. 4, p. 591-599.","productDescription":"9 p.","startPage":"591","endPage":"599","numberOfPages":"9","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":204023,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":24488,"rank":100,"type":{"id":15,"text":"Index Page"},"url":"https://www.asihcopeiaonline.org/doi/abs/10.1643/CE-09-199","linkFileType":{"id":5,"text":"html"}}],"country":"United States","state":"California","otherGeospatial":"Sacramento Valley","volume":"2010","issue":"4","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4a7fe4b07f02db64877a","contributors":{"authors":[{"text":"Halstead, Brian J. 0000-0002-5535-6528 bhalstead@usgs.gov","orcid":"https://orcid.org/0000-0002-5535-6528","contributorId":3051,"corporation":false,"usgs":true,"family":"Halstead","given":"Brian J.","email":"bhalstead@usgs.gov","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true},{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true}],"preferred":true,"id":348947,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wylie, Glenn D. 0000-0002-7061-6658 glenn_wylie@usgs.gov","orcid":"https://orcid.org/0000-0002-7061-6658","contributorId":3052,"corporation":false,"usgs":true,"family":"Wylie","given":"Glenn","email":"glenn_wylie@usgs.gov","middleInitial":"D.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348948,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Casazza, Michael L. 0000-0002-5636-735X mike_casazza@usgs.gov","orcid":"https://orcid.org/0000-0002-5636-735X","contributorId":2091,"corporation":false,"usgs":true,"family":"Casazza","given":"Michael","email":"mike_casazza@usgs.gov","middleInitial":"L.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348946,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70003566,"text":"70003566 - 2010 - Contribution of PAHs from coal-tar pavement sealcoat and other sources to 40 U.S. lakes","interactions":[],"lastModifiedDate":"2012-03-08T17:16:41","indexId":"70003566","displayToPublicDate":"2011-07-12T00:00:00","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Contribution of PAHs from coal-tar pavement sealcoat and other sources to 40 U.S. lakes","docAbstract":"Contamination of urban lakes and streams by polycyclic aromatic hydrocarbons (PAHs) has increased in the United States during the past 40 years. We evaluated sources of PAHs in post-1990 sediments in cores from 40 lakes in urban areas across the United States using a contaminant mass-balance receptor model and including as a potential source coal-tar-based (CT) sealcoat, a recently recognized source of urban PAH. Other PAH sources considered included several coal- and vehicle-related sources, wood combustion, and fuel-oil combustion. The four best modeling scenarios all indicate CT sealcoat is the largest PAH source when averaged across all 40 lakes, contributing about one-half of PAH in sediment, followed by vehicle-related sources and coal combustion. PAH concentrations in the lakes were highly correlated with PAH loading from CT sealcoat (Spearman's rho=0.98), and the mean proportional PAH profile for the 40 lakes was highly correlated with the PAH profile for dust from CT-sealed pavement (r=0.95). PAH concentrations and mass and fractional loading from CT sealcoat were significantly greater in the central and eastern United States than in the western United States, reflecting regional differences in use of different sealcoat product types. The model was used to calculate temporal trends in PAH source contributions during the last 40 to 100 years to eight of the 40 lakes. In seven of the lakes, CT sealcoat has been the largest source of PAHs since the 1960s, and in six of those lakes PAH trends are upward. Traffic is the largest source to the eighth lake, located in southern California where use of CT sealcoat is rare.","largerWorkType":{"id":2,"text":"Article"},"largerWorkTitle":"Science of the Total Environment","largerWorkSubtype":{"id":10,"text":"Journal Article"},"language":"English","publisher":"Elsevier","publisherLocation":"Amsterdam, Netherlands","usgsCitation":"Van Metre, P., and Mahler, B., 2010, Contribution of PAHs from coal-tar pavement sealcoat and other sources to 40 U.S. lakes: Science of the Total Environment, v. 409, no. 2, p. 334-344.","productDescription":"11 p.","startPage":"334","endPage":"344","numberOfPages":"11","costCenters":[{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true}],"links":[{"id":204054,"rank":0,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"},{"id":21720,"rank":200,"type":{"id":11,"text":"Document"},"url":"https://www.sciencedirect.com/science/journal/00489697","linkFileType":{"id":5,"text":"html"}}],"country":"United States","volume":"409","issue":"2","noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"4f4e4b1ae4b07f02db6a80ad","contributors":{"authors":[{"text":"Van Metre, Peter C.","contributorId":34104,"corporation":false,"usgs":true,"family":"Van Metre","given":"Peter C.","affiliations":[],"preferred":false,"id":347768,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Mahler, Barbara 0000-0002-9150-9552 bjmahler@usgs.gov","orcid":"https://orcid.org/0000-0002-9150-9552","contributorId":1249,"corporation":false,"usgs":true,"family":"Mahler","given":"Barbara","email":"bjmahler@usgs.gov","affiliations":[{"id":583,"text":"Texas Water Science Center","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":347767,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70003668,"text":"70003668 - 2010 - A rapid, strong, and convergent genetic response to urban habitat fragmentation in four divergent and widespread vertebrates","interactions":[],"lastModifiedDate":"2021-02-03T22:36:52.290868","indexId":"70003668","displayToPublicDate":"2011-06-16T16:50:02","publicationYear":"2010","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2980,"text":"PLoS ONE","active":true,"publicationSubtype":{"id":10}},"title":"A rapid, strong, and convergent genetic response to urban habitat fragmentation in four divergent and widespread vertebrates","docAbstract":"Background: Urbanization is a major cause of habitat fragmentation worldwide. Ecological and conservation theory predicts many potential impacts of habitat fragmentation on natural populations, including genetic impacts. Habitat fragmentation by urbanization causes populations of animals and plants to be isolated in patches of suitable habitat that are surrounded by non-native vegetation or severely altered vegetation, asphalt, concrete, and human structures. This can lead to genetic divergence between patches and in turn to decreased genetic diversity within patches through genetic drift and inbreeding. Methodology/Principal Findings: We examined population genetic patterns using microsatellites in four common vertebrate species, three lizards and one bird, in highly fragmented urban southern California. Despite significant phylogenetic, ecological, and mobility differences between these species, all four showed similar and significant reductions in gene flow over relatively short geographic and temporal scales. For all four species, the greatest genetic divergence was found where development was oldest and most intensive. All four animals also showed significant reduction in gene flow associated with intervening roads and freeways, the degree of patch isolation, and the time since isolation. Conclusions/Significance: Despite wide acceptance of the idea in principle, evidence of significant population genetic changes associated with fragmentation at small spatial and temporal scales has been rare, even in smaller terrestrial vertebrates, and especially for birds. Given the striking pattern of similar and rapid effects across four common and widespread species, including a volant bird, intense urbanization may represent the most severe form of fragmentation, with minimal effective movement through the urban matrix.","largerWorkTitle":"PLoS","language":"English","doi":"10.1371/journal.pone.0012767","usgsCitation":"Delaney, K.S., Riley, S.P., and Fisher, R.N., 2010, A rapid, strong, and convergent genetic response to urban habitat fragmentation in four divergent and widespread vertebrates: PLoS ONE, v. 5, no. 9, e12767, 11 p., https://doi.org/10.1371/journal.pone.0012767.","productDescription":"e12767, 11 p.","costCenters":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"links":[{"id":475597,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1371/journal.pone.0012767","text":"Publisher Index Page"},{"id":382898,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"California","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -119.17968749999999,\n              34.15272698011818\n            ],\n            [\n              -118.5205078125,\n              34.15272698011818\n            ],\n            [\n              -118.5205078125,\n              34.4069096565206\n            ],\n            [\n              -119.17968749999999,\n              34.4069096565206\n            ],\n            [\n              -119.17968749999999,\n              34.15272698011818\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"5","issue":"9","noUsgsAuthors":false,"publicationDate":"2010-09-16","publicationStatus":"PW","scienceBaseUri":"4f4e4b1ae4b07f02db6a87a8","contributors":{"authors":[{"text":"Delaney, Kathleen Semple","contributorId":84889,"corporation":false,"usgs":true,"family":"Delaney","given":"Kathleen","email":"","middleInitial":"Semple","affiliations":[],"preferred":false,"id":348255,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Riley, Seth P.D.","contributorId":83246,"corporation":false,"usgs":true,"family":"Riley","given":"Seth","email":"","middleInitial":"P.D.","affiliations":[],"preferred":false,"id":348254,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Fisher, Robert N. 0000-0002-2956-3240 rfisher@usgs.gov","orcid":"https://orcid.org/0000-0002-2956-3240","contributorId":1529,"corporation":false,"usgs":true,"family":"Fisher","given":"Robert","email":"rfisher@usgs.gov","middleInitial":"N.","affiliations":[{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":348253,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
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