{"pageNumber":"997","pageRowStart":"24900","pageSize":"25","recordCount":184717,"records":[{"id":70164381,"text":"70164381 - 2017 - Capturing spatiotemporal variation in wildfires for improving postwildfire debris-flow hazard assessments","interactions":[],"lastModifiedDate":"2020-08-20T19:33:39.704722","indexId":"70164381","displayToPublicDate":"2017-04-17T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"chapter":"20","title":"Capturing spatiotemporal variation in wildfires for improving postwildfire debris-flow hazard assessments","docAbstract":"<p><span>Wildfires can increase the frequency and magnitude of catastrophic debris flows. Integrated, proactive natural hazard assessment would therefore characterize landscapes based on the potential for the occurrence and interactions of wildfires and postwildfire debris flows. This chapter presents a new modeling effort that can quantify the variability surrounding a key input to postwildfire debris-flow modeling, the amount of watershed burned at moderate to high severity, in a prewildfire context. The use of stochastic wildfire simulation captures variability surrounding the timing and location of ignitions, fire weather patterns, and ultimately the spatial patterns of watershed area burned. Model results provide for enhanced estimates of postwildfire debris-flow hazard in a prewildfire context, and multiple hazard metrics are generated to characterize and contrast hazards across watersheds. Results can guide mitigation efforts by allowing planners to identify which factors may be contributing the most to the hazard rankings of watersheds.</span></p>","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Natural Hazard Uncertainty Assessment: Modeling and Decision Support","largerWorkSubtype":{"id":15,"text":"Monograph"},"language":"English","publisher":"American Geophysical Union","publisherLocation":"Washington, D.C.","doi":"10.1002/9781119028116.ch20","usgsCitation":"Haas, J., Thompson, M.P., Tillery, A.C., and Scott, J.H., 2017, Capturing spatiotemporal variation in wildfires for improving postwildfire debris-flow hazard assessments, chap. 20 <i>of</i> Natural Hazard Uncertainty Assessment: Modeling and Decision Support, p. 301-317, https://doi.org/10.1002/9781119028116.ch20.","productDescription":"17 p.","startPage":"301","endPage":"317","ipdsId":"IP-063722","costCenters":[{"id":472,"text":"New Mexico Water Science Center","active":true,"usgs":true}],"links":[{"id":339816,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationDate":"2016-11-19","publicationStatus":"PW","scienceBaseUri":"58f5d43ce4b0f2e20545e403","contributors":{"authors":[{"text":"Haas, Jessica R.","contributorId":10735,"corporation":false,"usgs":true,"family":"Haas","given":"Jessica R.","affiliations":[],"preferred":false,"id":597127,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Thompson, Matthew P.","contributorId":25045,"corporation":false,"usgs":true,"family":"Thompson","given":"Matthew","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":597128,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Tillery, Anne C. 0000-0002-9508-7908 atillery@usgs.gov","orcid":"https://orcid.org/0000-0002-9508-7908","contributorId":2549,"corporation":false,"usgs":true,"family":"Tillery","given":"Anne","email":"atillery@usgs.gov","middleInitial":"C.","affiliations":[{"id":472,"text":"New Mexico Water Science Center","active":true,"usgs":true}],"preferred":true,"id":597126,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Scott, Joe H.","contributorId":28913,"corporation":false,"usgs":true,"family":"Scott","given":"Joe","email":"","middleInitial":"H.","affiliations":[],"preferred":false,"id":597130,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70189815,"text":"70189815 - 2017 - Disturbance automated reference toolset (DART): Assessing patterns in ecological recovery from energy development on the Colorado Plateau","interactions":[],"lastModifiedDate":"2017-07-26T17:01:43","indexId":"70189815","displayToPublicDate":"2017-04-15T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3352,"text":"Science of the Total Environment","active":true,"publicationSubtype":{"id":10}},"title":"Disturbance automated reference toolset (DART): Assessing patterns in ecological recovery from energy development on the Colorado Plateau","docAbstract":"<p><span>A new disturbance automated reference toolset (DART) was developed to monitor human land surface impacts using soil-type and ecological context. DART identifies reference areas with similar soils, topography, and geology; and compares the disturbance condition to the reference area condition using a quantile-based approach based on a satellite vegetation index. DART was able to represent 26–55% of variation of relative differences in bare ground and 26–41% of variation in total foliar cover when comparing sites with nearby ecological reference areas using the Soil Adjusted Total Vegetation Index (SATVI). Assessment of ecological recovery at oil and gas pads on the Colorado Plateau with DART revealed that more than half of well-pads were below the 25th percentile of reference areas. Machine learning trend analysis of poorly recovering well-pads (quantile</span><span>&nbsp;</span><span>&lt;</span><span>&nbsp;</span><span>0.23) had out-of-bag error rates between 37 and 40% indicating moderate association with environmental and management variables hypothesized to influence recovery. Well-pads in grasslands (median quantile [MQ]</span><span>&nbsp;</span><span>=</span><span>&nbsp;</span><span>13%), blackbrush (</span><i>Coleogyne ramosissima</i><span>) shrublands (MQ</span><span>&nbsp;</span><span>=</span><span>&nbsp;</span><span>18%), arid canyon complexes (MQ</span><span>&nbsp;</span><span>=</span><span>&nbsp;</span><span>18%), warmer areas with more summer-dominated precipitation, and state administered areas (MQ</span><span>&nbsp;</span><span>=</span><span>&nbsp;</span><span>12%) had low recovery rates. Results showcase the usefulness of DART for assessing discrete surface land disturbances, and highlight the need for more targeted rehabilitation efforts at oil and gas well-pads in the arid southwest US.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.scitotenv.2017.01.034","usgsCitation":"Nauman, T.W., Duniway, M.C., Villarreal, M.L., and Poitras, T.B., 2017, Disturbance automated reference toolset (DART): Assessing patterns in ecological recovery from energy development on the Colorado Plateau: Science of the Total Environment, v. 584-585, p. 476-488, https://doi.org/10.1016/j.scitotenv.2017.01.034.","productDescription":"13 p.","startPage":"476","endPage":"488","ipdsId":"IP-077123","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":469920,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.scitotenv.2017.01.034","text":"Publisher Index Page"},{"id":344368,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":"Colorado Plateau","volume":"584-585","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5979aa55e4b0ec1a488b8c09","contributors":{"authors":[{"text":"Nauman, Travis W. 0000-0001-8004-0608 tnauman@usgs.gov","orcid":"https://orcid.org/0000-0001-8004-0608","contributorId":169241,"corporation":false,"usgs":true,"family":"Nauman","given":"Travis","email":"tnauman@usgs.gov","middleInitial":"W.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":706444,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Duniway, Michael C. 0000-0002-9643-2785 mduniway@usgs.gov","orcid":"https://orcid.org/0000-0002-9643-2785","contributorId":4212,"corporation":false,"usgs":true,"family":"Duniway","given":"Michael","email":"mduniway@usgs.gov","middleInitial":"C.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":706445,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Villarreal, Miguel L. 0000-0003-0720-1422 mvillarreal@usgs.gov","orcid":"https://orcid.org/0000-0003-0720-1422","contributorId":1424,"corporation":false,"usgs":true,"family":"Villarreal","given":"Miguel","email":"mvillarreal@usgs.gov","middleInitial":"L.","affiliations":[{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"preferred":true,"id":706446,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Poitras, Travis B. 0000-0001-8677-1743 tpoitras@usgs.gov","orcid":"https://orcid.org/0000-0001-8677-1743","contributorId":195168,"corporation":false,"usgs":true,"family":"Poitras","given":"Travis","email":"tpoitras@usgs.gov","middleInitial":"B.","affiliations":[{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"preferred":true,"id":706447,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70193191,"text":"70193191 - 2017 - The effect of urban growth on landscape-scale restoration for a fire-dependent songbird","interactions":[],"lastModifiedDate":"2018-03-29T14:07:49","indexId":"70193191","displayToPublicDate":"2017-04-15T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2258,"text":"Journal of Environmental Management","active":true,"publicationSubtype":{"id":10}},"title":"The effect of urban growth on landscape-scale restoration for a fire-dependent songbird","docAbstract":"<p><span>A landscape-scale perspective on restoration ecology has been advocated, but few studies have informed restoration with landscape metrics or addressed broad-scale threats. Threats such as urban growth may affect restoration effectiveness in a landscape context. Here, we studied longleaf pine savanna in the rapidly urbanizing southeastern United States where a habitat-specialist bird, Bachman's sparrow (</span><i>Peucaea aestivalis</i><span>), is closely associated with savanna vegetation structure and frequent fire. Our objectives were to construct a species distribution model for Bachman's sparrow, determine the relationship between fire and urbanization, quantify the urban growth effect (2010–2090), identify potential restoration areas, and determine the interaction between restoration potential and urban growth by 2050. Number of patches, patch size, and isolation metrics were used to evaluate scenarios. The species distribution model was 88% accurate and emphasized multiscale canopy cover characteristics, fire, and percent habitat. Fires were less common &lt;600&nbsp;m from urban areas, and this fire suppression effect exacerbated urban growth effects. For restoration scenarios, canopy cover reduction by 30% resulted in nearly double the amount of habitat compared to the prescribed fire scenario; canopy cover reduction resulted in larger patch sizes and less patch isolation compared to current conditions. The effect of urban growth on restoration scenarios was unequal. Seventy-four percent of restoration areas from the prescribed fire scenario overlapped with projected urban growth, whereas the canopy cover reduction scenario only overlapped by 9%. We emphasize the benefits of simultaneously considering the effects of urban growth and landscape-scale restoration potential to promote a landscape with greater patch sizes and less isolation.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.jenvman.2017.01.005","usgsCitation":"Pickens, B.A., Marcus, J.F., Carpenter, J.P., Anderson, S., Taillie, P.J., and Collazo, J., 2017, The effect of urban growth on landscape-scale restoration for a fire-dependent songbird: Journal of Environmental Management, v. 191, p. 105-115, https://doi.org/10.1016/j.jenvman.2017.01.005.","productDescription":"11 p.","startPage":"105","endPage":"115","ipdsId":"IP-074203","costCenters":[{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"links":[{"id":469921,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.jenvman.2017.01.005","text":"Publisher Index Page"},{"id":352949,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"North Carolina","volume":"191","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"5afee893e4b0da30c1bfc470","contributors":{"authors":[{"text":"Pickens, Bradley A.","contributorId":140926,"corporation":false,"usgs":false,"family":"Pickens","given":"Bradley","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":732034,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Marcus, Jeffrey F.","contributorId":203645,"corporation":false,"usgs":false,"family":"Marcus","given":"Jeffrey","email":"","middleInitial":"F.","affiliations":[],"preferred":false,"id":732035,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Carpenter, John P.","contributorId":203646,"corporation":false,"usgs":false,"family":"Carpenter","given":"John","email":"","middleInitial":"P.","affiliations":[],"preferred":false,"id":732036,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Anderson, Scott","contributorId":56997,"corporation":false,"usgs":true,"family":"Anderson","given":"Scott","affiliations":[],"preferred":false,"id":732037,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Taillie, Paul J.","contributorId":203647,"corporation":false,"usgs":false,"family":"Taillie","given":"Paul","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":732038,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Collazo, Jaime A. 0000-0002-1816-7744 jaime_collazo@usgs.gov","orcid":"https://orcid.org/0000-0002-1816-7744","contributorId":173448,"corporation":false,"usgs":true,"family":"Collazo","given":"Jaime A.","email":"jaime_collazo@usgs.gov","affiliations":[{"id":199,"text":"Coop Res Unit Leetown","active":true,"usgs":true},{"id":198,"text":"Coop Res Unit Atlanta","active":true,"usgs":true}],"preferred":false,"id":718146,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70186928,"text":"70186928 - 2017 - Opinion: Why we need a centralized repository for isotopic data","interactions":[],"lastModifiedDate":"2017-04-14T14:53:16","indexId":"70186928","displayToPublicDate":"2017-04-14T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3165,"text":"Proceedings of the National Academy of Sciences of the United States of America","active":true,"publicationSubtype":{"id":10}},"title":"Opinion: Why we need a centralized repository for isotopic data","docAbstract":"<p><span>Stable isotopes encode and integrate the origin of matter; thus, their analysis offers tremendous potential to address questions across diverse scientific disciplines (</span><span class=\"xref-bibr\">1</span><span>, </span><span class=\"xref-bibr\">2</span><span>). Indeed, the broad applicability of stable isotopes, coupled with advancements in high-throughput analysis, have created a scientific field that is growing exponentially, and generating data at a rate paralleling the explosive rise of DNA sequencing and genomics (</span><span class=\"xref-bibr\">3</span><span>). Centralized data repositories, such as GenBank, have become increasingly important as a means for archiving information, and “Big Data” analytics of these resources are revolutionizing science and everyday life.</span></p>","language":"English","publisher":"PNAS","doi":"10.1073/pnas.1701742114","usgsCitation":"Pauli, J.N., Newsome, S.D., Cook, J.A., Harrod, C., Steffan, S.A., Baker, C., Ben-David, M., Bloom, D., Bowen, G.J., Cerling, T.E., Cicero, C., Cook, C., Dohm, M., Dharampal, P.S., Graves, G., Gropp, R., Hobson, K.A., Jordan, C., MacFadden, B., Pilaar Birch, S., Poelen, J., Ratnasingham, S., Russell, L., Stricker, C.A., Uhen, M.D., Yarnes, C.T., and Hayden, B., 2017, Opinion: Why we need a centralized repository for isotopic data: Proceedings of the National Academy of Sciences of the United States of America, v. 114, no. 12, p. 2997-3001, https://doi.org/10.1073/pnas.1701742114.","productDescription":"5 p.","startPage":"2997","endPage":"3001","ipdsId":"IP-081710","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":469923,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1073/pnas.1701742114","text":"Publisher Index Page"},{"id":339749,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"114","issue":"12","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationDate":"2017-03-21","publicationStatus":"PW","scienceBaseUri":"58f1e0c6e4b08144348b7ddc","contributors":{"authors":[{"text":"Pauli, Jonathan N.","contributorId":190897,"corporation":false,"usgs":false,"family":"Pauli","given":"Jonathan","email":"","middleInitial":"N.","affiliations":[],"preferred":false,"id":691033,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Newsome, Seth D.","contributorId":81640,"corporation":false,"usgs":false,"family":"Newsome","given":"Seth","email":"","middleInitial":"D.","affiliations":[{"id":7000,"text":"Department of Biology, University of New Mexico","active":true,"usgs":false}],"preferred":false,"id":691034,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Cook, Joseph A.","contributorId":8323,"corporation":false,"usgs":false,"family":"Cook","given":"Joseph","email":"","middleInitial":"A.","affiliations":[{"id":7000,"text":"Department of Biology, University of New Mexico","active":true,"usgs":false}],"preferred":false,"id":691035,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Harrod, Chris","contributorId":190898,"corporation":false,"usgs":false,"family":"Harrod","given":"Chris","email":"","affiliations":[],"preferred":false,"id":691036,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Steffan, Shawn A.","contributorId":190899,"corporation":false,"usgs":false,"family":"Steffan","given":"Shawn","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":691037,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Baker, Christopher J. O.","contributorId":190900,"corporation":false,"usgs":false,"family":"Baker","given":"Christopher J. O.","affiliations":[],"preferred":false,"id":691038,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Ben-David, Merav","contributorId":190901,"corporation":false,"usgs":false,"family":"Ben-David","given":"Merav","email":"","affiliations":[{"id":17842,"text":"University of Wyoming, Laramie","active":true,"usgs":false}],"preferred":false,"id":691039,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Bloom, David","contributorId":190902,"corporation":false,"usgs":false,"family":"Bloom","given":"David","email":"","affiliations":[],"preferred":false,"id":691040,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Bowen, Gabriel J.","contributorId":138889,"corporation":false,"usgs":false,"family":"Bowen","given":"Gabriel","email":"","middleInitial":"J.","affiliations":[{"id":12566,"text":"Department of Geology and Geophysics, Unviersity of Utah","active":true,"usgs":false}],"preferred":false,"id":691041,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Cerling, Thure E.","contributorId":22822,"corporation":false,"usgs":true,"family":"Cerling","given":"Thure","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":691042,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Cicero, Carla","contributorId":145565,"corporation":false,"usgs":false,"family":"Cicero","given":"Carla","email":"","affiliations":[{"id":6609,"text":"UC Berkeley","active":true,"usgs":false}],"preferred":false,"id":691043,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Cook, Craig","contributorId":190904,"corporation":false,"usgs":false,"family":"Cook","given":"Craig","email":"","affiliations":[],"preferred":false,"id":691044,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Dohm, Michelle","contributorId":190905,"corporation":false,"usgs":false,"family":"Dohm","given":"Michelle","email":"","affiliations":[],"preferred":false,"id":691045,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Dharampal, Prarthana S.","contributorId":190906,"corporation":false,"usgs":false,"family":"Dharampal","given":"Prarthana","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":691046,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Graves, Gary","contributorId":190907,"corporation":false,"usgs":false,"family":"Graves","given":"Gary","affiliations":[],"preferred":false,"id":691047,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Gropp, Robert","contributorId":190908,"corporation":false,"usgs":false,"family":"Gropp","given":"Robert","email":"","affiliations":[],"preferred":false,"id":691048,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Hobson, Keith A.","contributorId":190909,"corporation":false,"usgs":false,"family":"Hobson","given":"Keith","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":691049,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Jordan, Chris","contributorId":190910,"corporation":false,"usgs":false,"family":"Jordan","given":"Chris","affiliations":[],"preferred":false,"id":691050,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"MacFadden, Bruce","contributorId":190911,"corporation":false,"usgs":false,"family":"MacFadden","given":"Bruce","email":"","affiliations":[],"preferred":false,"id":691051,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Pilaar Birch, Suzanne","contributorId":190912,"corporation":false,"usgs":false,"family":"Pilaar Birch","given":"Suzanne","affiliations":[],"preferred":false,"id":691052,"contributorType":{"id":1,"text":"Authors"},"rank":20},{"text":"Poelen, Jorrit","contributorId":190913,"corporation":false,"usgs":false,"family":"Poelen","given":"Jorrit","email":"","affiliations":[],"preferred":false,"id":691053,"contributorType":{"id":1,"text":"Authors"},"rank":21},{"text":"Ratnasingham, Sujeevan","contributorId":190914,"corporation":false,"usgs":false,"family":"Ratnasingham","given":"Sujeevan","email":"","affiliations":[],"preferred":false,"id":691054,"contributorType":{"id":1,"text":"Authors"},"rank":22},{"text":"Russell, Laura","contributorId":190915,"corporation":false,"usgs":false,"family":"Russell","given":"Laura","email":"","affiliations":[],"preferred":false,"id":691055,"contributorType":{"id":1,"text":"Authors"},"rank":23},{"text":"Stricker, Craig A. 0000-0002-5031-9437 cstricker@usgs.gov","orcid":"https://orcid.org/0000-0002-5031-9437","contributorId":1097,"corporation":false,"usgs":true,"family":"Stricker","given":"Craig","email":"cstricker@usgs.gov","middleInitial":"A.","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":691032,"contributorType":{"id":1,"text":"Authors"},"rank":24},{"text":"Uhen, Mark D.","contributorId":171936,"corporation":false,"usgs":false,"family":"Uhen","given":"Mark","email":"","middleInitial":"D.","affiliations":[{"id":12909,"text":"George Mason University","active":true,"usgs":false}],"preferred":false,"id":691056,"contributorType":{"id":1,"text":"Authors"},"rank":25},{"text":"Yarnes, Christopher T.","contributorId":190916,"corporation":false,"usgs":false,"family":"Yarnes","given":"Christopher","email":"","middleInitial":"T.","affiliations":[],"preferred":false,"id":691057,"contributorType":{"id":1,"text":"Authors"},"rank":26},{"text":"Hayden, Brian","contributorId":190917,"corporation":false,"usgs":false,"family":"Hayden","given":"Brian","email":"","affiliations":[],"preferred":false,"id":691058,"contributorType":{"id":1,"text":"Authors"},"rank":27}]}}
,{"id":70186759,"text":"sir20175024 - 2017 - Developing flood-inundation maps for Johnson Creek, Portland, Oregon","interactions":[],"lastModifiedDate":"2017-04-20T11:18:36","indexId":"sir20175024","displayToPublicDate":"2017-04-14T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":334,"text":"Scientific Investigations Report","code":"SIR","onlineIssn":"2328-0328","printIssn":"2328-031X","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2017-5024","title":"Developing flood-inundation maps for Johnson Creek, Portland, Oregon","docAbstract":"<p class=\"p1\">Digital flood-inundation maps were created for a 12.9‑mile reach of Johnson Creek by the U.S. Geological Survey (USGS). The flood-inundation maps depict estimates of water depth and areal extent of flooding from the mouth of Johnson Creek to just upstream of Southeast 174th Avenue in Portland, Oregon. Each flood-inundation map is based on a specific water level and associated streamflow at the USGS streamgage, Johnson Creek at Sycamore, Oregon (14211500), which is located near the upstream boundary of the maps. The maps produced by the USGS, and the forecasted flood hydrographs produced by National Weather Service River Forecast Center can be accessed through the USGS Flood Inundation Mapper Web site (<span class=\"s1\"><a href=\"http://wimcloud.usgs.gov/apps/FIM/FloodInundationMapper.html\" target=\"blank\" data-mce-href=\"http://wimcloud.usgs.gov/apps/FIM/FloodInundationMapper.html\">http://wimcloud.usgs.gov/apps/FIM/FloodInundationMapper.html</a>)</span>.</p><p class=\"p1\">Water-surface elevations were computed for Johnson Creek using a combined one-dimensional and two‑dimensional unsteady hydraulic flow model. The model was calibrated using data collected from the flood of December 2015 (including the calculated streamflows at two USGS streamgages on Johnson Creek) and validated with data from the flood of January 2009. Results were typically within 0.6 foot (ft) of recorded or measured water-surface elevations from the December 2015 flood, and within 0.8 ft from the January 2009 flood. Output from the hydraulic model was used to create eight flood inundation maps ranging in stage from 9 to 16 ft. Boundary condition hydrographs were identical in shape to those from the December 2015 flood event, but were scaled up or down to produce the amount of streamflow corresponding to a specific water-surface elevation at the Sycamore streamgage (14211500). Sensitivity analyses using other hydrograph shapes, and a version of the model in which the peak flow is maintained for an extended period of time, showed minimal variation, except for overbank areas near the Foster Floodplain Natural Area.</p><p class=\"p1\">Simulated water-surface profiles were combined with light detection and ranging (lidar) data collected in 2014 to delineate water-surface extents for each of the eight modeled stages. The availability of flood-inundation maps in conjunction with real-time data from the USGS streamgages along Johnson Creek and forecasted hydrographs from the National Weather Service Northwest River Forecast Center will provide residents of the watershed and emergency management personnel with valuable information that may aid in flood response, including potential evacuations, road closures, and mitigation efforts. In addition, these maps may be used for post-flood recovery efforts.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/sir20175024","collaboration":"Prepared in cooperation with the City of Portland Bureau of Environmental Services","usgsCitation":"Stonewall, A.J., and Beal, B.A., 2017, Developing flood-Inundation maps for Johnson Creek, Portland, Oregon: U.S. Geological Survey Scientific Investigations Report 2017–5024, 26 p., https://doi.org/10.3133/sir20175024.","productDescription":"v, 26 p.","onlineOnly":"Y","ipdsId":"IP-080503","costCenters":[{"id":518,"text":"Oregon Water Science Center","active":true,"usgs":true}],"links":[{"id":339976,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F75X273G","text":"USGS data release","description":"USGS data release","linkHelpText":"Flood inundation mapping data for Johnson Creek near Sycamore, Oregon"},{"id":339738,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/sir/2017/5024/coverthb.jpg"},{"id":339739,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/sir/2017/5024/sir20175024.pdf","text":"Report","size":"9 MB","linkFileType":{"id":1,"text":"pdf"},"description":"SIR 2017-5024"}],"country":"United States","state":"Oregon","city":"Portland","otherGeospatial":"Johnson Creek","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -122.655556,\n              45.506944\n            ],\n            [\n              -122.472222,\n              45.506944\n            ],\n            [\n              -122.472222,\n              45.408333\n            ],\n            [\n              -122.655556,\n              45.408333\n            ],\n            [\n              -122.655556,\n              45.506944\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p><a href=\"mailto:dc_or@usgs.gov\" data-mce-href=\"mailto:dc_or@usgs.gov\">Director</a>, Oregon Water Science Center<br> U.S. Geological Survey<br> 2130 SW 5th Avenue<br> Portland, Oregon 97201<br> <a href=\"http://or.water.usgs.gov\" target=\"blank\" data-mce-href=\"http://or.water.usgs.gov\">http://or.water.usgs.gov</a></p>","tableOfContents":"<ul><li>Abstract<br></li><li>Introduction<br></li><li>Development of Flood-Inundation Map Library<br></li><li>Suggestions for Future Research<br></li><li>Summary<br></li><li>Acknowledgments<br></li><li>References Cited<br></li></ul>","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"publishedDate":"2017-04-14","noUsgsAuthors":false,"publicationDate":"2017-04-14","publicationStatus":"PW","scienceBaseUri":"58f1e0c9e4b08144348b7df0","contributors":{"authors":[{"text":"Stonewall, Adam J. 0000-0002-3277-8736 stonewal@usgs.gov","orcid":"https://orcid.org/0000-0002-3277-8736","contributorId":138801,"corporation":false,"usgs":true,"family":"Stonewall","given":"Adam","email":"stonewal@usgs.gov","middleInitial":"J.","affiliations":[{"id":518,"text":"Oregon Water Science Center","active":true,"usgs":true}],"preferred":false,"id":690480,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Beal, Benjamin A. 0000-0002-4914-481X bbeal@usgs.gov","orcid":"https://orcid.org/0000-0002-4914-481X","contributorId":5517,"corporation":false,"usgs":true,"family":"Beal","given":"Benjamin","email":"bbeal@usgs.gov","middleInitial":"A.","affiliations":[{"id":518,"text":"Oregon Water Science Center","active":true,"usgs":true}],"preferred":true,"id":690481,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70186910,"text":"70186910 - 2017 - Community disruptions and business costs for distant tsunami evacuations using maximum versus scenario-based zones","interactions":[],"lastModifiedDate":"2017-04-14T09:27:18","indexId":"70186910","displayToPublicDate":"2017-04-14T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2822,"text":"Natural Hazards","active":true,"publicationSubtype":{"id":10}},"title":"Community disruptions and business costs for distant tsunami evacuations using maximum versus scenario-based zones","docAbstract":"<p><span>Well-executed evacuations are key to minimizing loss of life from tsunamis, yet they also disrupt communities and business productivity in the process. Most coastal communities implement evacuations based on a previously delineated maximum-inundation zone that integrates zones from multiple tsunami sources. To support consistent evacuation planning that protects lives but attempts to minimize community disruptions, we explore the implications of scenario-based evacuation procedures and use the California (USA) coastline as our case study. We focus on the land in coastal communities that is in maximum-evacuation zones, but is not expected to be flooded by a tsunami generated by a Chilean earthquake scenario. Results suggest that a scenario-based evacuation could greatly reduce the number of residents and employees that would be advised to evacuate for 24–36&nbsp;h (178,646 and 159,271 fewer individuals, respectively) and these reductions are concentrated primarily in three counties for this scenario. Private evacuation spending is estimated to be greater than public expenditures for operating shelters in the area of potential over-evacuations ($13 million compared to $1 million for a 1.5-day evacuation). Short-term disruption costs for businesses in the area of potential over-evacuation are approximately $122 million for a 1.5-day evacuation, with one-third of this cost associated with manufacturing, suggesting that some disruption costs may be recouped over time with increased short-term production. There are many businesses and organizations in this area that contain individuals with limited mobility or access and functional needs that may have substantial evacuation challenges. This study demonstrates and discusses the difficulties of tsunami-evacuation decision-making for relatively small to moderate events faced by emergency managers, not only in California but in coastal communities throughout the world.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s11069-016-2709-y","usgsCitation":"Wood, N.J., Wilson, R.I., Ratliff, J.L., Peters, J., MacMullan, E., Krebs, T., Shoaf, K., and Miller, K., 2017, Community disruptions and business costs for distant tsunami evacuations using maximum versus scenario-based zones: Natural Hazards, v. 86, no. 2, p. 619-643, https://doi.org/10.1007/s11069-016-2709-y.","productDescription":"25 p.","startPage":"619","endPage":"643","ipdsId":"IP-076947","costCenters":[{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"links":[{"id":469922,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.1007/s11069-016-2709-y","text":"External Repository"},{"id":339725,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"86","issue":"2","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2016-12-16","publicationStatus":"PW","scienceBaseUri":"58f1e0c8e4b08144348b7de9","contributors":{"authors":[{"text":"Wood, Nathan J. 0000-0002-6060-9729 nwood@usgs.gov","orcid":"https://orcid.org/0000-0002-6060-9729","contributorId":3347,"corporation":false,"usgs":true,"family":"Wood","given":"Nathan","email":"nwood@usgs.gov","middleInitial":"J.","affiliations":[{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"preferred":true,"id":690972,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wilson, Rick I.","contributorId":56138,"corporation":false,"usgs":false,"family":"Wilson","given":"Rick","email":"","middleInitial":"I.","affiliations":[],"preferred":false,"id":690973,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Ratliff, Jamie L. 0000-0002-9967-3314 jratliff@usgs.gov","orcid":"https://orcid.org/0000-0002-9967-3314","contributorId":665,"corporation":false,"usgs":true,"family":"Ratliff","given":"Jamie","email":"jratliff@usgs.gov","middleInitial":"L.","affiliations":[{"id":237,"text":"Earthquake Science Center","active":true,"usgs":true},{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true},{"id":617,"text":"Volcano Science Center","active":true,"usgs":true}],"preferred":true,"id":690974,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Peters, Jeff 0000-0003-4312-0590 jpeters@usgs.gov","orcid":"https://orcid.org/0000-0003-4312-0590","contributorId":4711,"corporation":false,"usgs":true,"family":"Peters","given":"Jeff","email":"jpeters@usgs.gov","affiliations":[{"id":617,"text":"Volcano Science Center","active":true,"usgs":true},{"id":657,"text":"Western Geographic Science Center","active":true,"usgs":true}],"preferred":true,"id":690975,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"MacMullan, Ed","contributorId":190879,"corporation":false,"usgs":false,"family":"MacMullan","given":"Ed","email":"","affiliations":[],"preferred":false,"id":690976,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Krebs, Tessa","contributorId":190880,"corporation":false,"usgs":false,"family":"Krebs","given":"Tessa","email":"","affiliations":[],"preferred":false,"id":690977,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Shoaf, Kimberley","contributorId":190881,"corporation":false,"usgs":false,"family":"Shoaf","given":"Kimberley","email":"","affiliations":[],"preferred":false,"id":690978,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Miller, Kevin","contributorId":178815,"corporation":false,"usgs":false,"family":"Miller","given":"Kevin","affiliations":[],"preferred":false,"id":690979,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70186921,"text":"70186921 - 2017 - The effects of drought and fire in the extirpation of an abundant semi-aquatic turtle from a lacustrine environment in the southwestern USA","interactions":[],"lastModifiedDate":"2017-04-14T13:02:13","indexId":"70186921","displayToPublicDate":"2017-04-14T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2585,"text":"Knowledge and Management of Aquatic Ecosystems","active":true,"publicationSubtype":{"id":10}},"title":"The effects of drought and fire in the extirpation of an abundant semi-aquatic turtle from a lacustrine environment in the southwestern USA","docAbstract":"<p><span>We documented a significant mortality event affecting a southwestern pond turtle (</span><i>Actinemys pallida</i><span>) population living in a lake in southern California, USA. The area around the lake was impacted by a large wildland fire in 2013 that occurred during a protracted drought. As the mortality event was still unfolding, we collected data in 2014 on water quality, demographic structure, and short-term survivorship of the population. Water quality was poor with low levels of dissolved oxygen and high salinity of up to 45.90 ppt. Many turtles were severely emaciated and coated with a pale mineralized layer on their shells and skin. Estimated survival rate was low leading to a projected 90% decline in 134 days and a high probability of extirpation within a year. The lake was dry in September 2015 with no evidence of live turtles. Necropsies and low volumetric body condition indices suggested death by starvation. Although this semi-aquatic species has the ability to aestivate in upland habitats during periods of low water or move to other nearby water bodies, it is unlikely that many were able to do so because of their extremely poor condition and the severity of the drought conditions throughout the area.</span></p>","language":"English","publisher":"EDP Sciences","doi":"10.1051/kmae/2017008","usgsCitation":"Lovich, J.E., Quillman, M., Zitt, B., Schroeder, A., Green, D.E., Yackulic, C.B., Gibbons, P., and Goode, E., 2017, The effects of drought and fire in the extirpation of an abundant semi-aquatic turtle from a lacustrine environment in the southwestern USA: Knowledge and Management of Aquatic Ecosystems, v. 418, p. 1-11, https://doi.org/10.1051/kmae/2017008.","productDescription":"Article number 18; 11 p.","startPage":"1","endPage":"11","ipdsId":"IP-071578","costCenters":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true},{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":461639,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1051/kmae/2017008","text":"Publisher Index Page"},{"id":438371,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7FN154F","text":"USGS data release","linkHelpText":"Southern Pacific Pond Turtle Data, Elizabeth Lake, Los Angeles County, California, USA"},{"id":339735,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"418","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2017-04-10","publicationStatus":"PW","scienceBaseUri":"58f1e0c7e4b08144348b7de5","contributors":{"authors":[{"text":"Lovich, Jeffrey E. 0000-0002-7789-2831 jeffrey_lovich@usgs.gov","orcid":"https://orcid.org/0000-0002-7789-2831","contributorId":458,"corporation":false,"usgs":true,"family":"Lovich","given":"Jeffrey","email":"jeffrey_lovich@usgs.gov","middleInitial":"E.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true},{"id":651,"text":"Western Ecological Research Center","active":true,"usgs":true}],"preferred":true,"id":691001,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Quillman, Mari","contributorId":190889,"corporation":false,"usgs":false,"family":"Quillman","given":"Mari","email":"","affiliations":[],"preferred":false,"id":691002,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Zitt, Brian","contributorId":190890,"corporation":false,"usgs":false,"family":"Zitt","given":"Brian","email":"","affiliations":[],"preferred":false,"id":691003,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Schroeder, Adam","contributorId":190891,"corporation":false,"usgs":false,"family":"Schroeder","given":"Adam","email":"","affiliations":[],"preferred":false,"id":691004,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Green, David E. 0000-0002-7663-1832 degreen@usgs.gov","orcid":"https://orcid.org/0000-0002-7663-1832","contributorId":3715,"corporation":false,"usgs":true,"family":"Green","given":"David","email":"degreen@usgs.gov","middleInitial":"E.","affiliations":[{"id":456,"text":"National Wildlife Health Center","active":true,"usgs":true}],"preferred":true,"id":691005,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Yackulic, Charles B. 0000-0001-9661-0724 cyackulic@usgs.gov","orcid":"https://orcid.org/0000-0001-9661-0724","contributorId":4662,"corporation":false,"usgs":true,"family":"Yackulic","given":"Charles","email":"cyackulic@usgs.gov","middleInitial":"B.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":691006,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Gibbons, Paul","contributorId":190892,"corporation":false,"usgs":false,"family":"Gibbons","given":"Paul","affiliations":[],"preferred":false,"id":691007,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Goode, Eric","contributorId":190893,"corporation":false,"usgs":false,"family":"Goode","given":"Eric","email":"","affiliations":[],"preferred":false,"id":691008,"contributorType":{"id":1,"text":"Authors"},"rank":8}]}}
,{"id":70186776,"text":"ofr20171026 - 2017 - Potential effects of existing and proposed groundwater withdrawals on water levels and natural groundwater discharge in Snake Valley and surrounding areas, Utah and Nevada","interactions":[],"lastModifiedDate":"2017-04-17T15:35:48","indexId":"ofr20171026","displayToPublicDate":"2017-04-14T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2017-1026","title":"Potential effects of existing and proposed groundwater withdrawals on water levels and natural groundwater discharge in Snake Valley and surrounding areas, Utah and Nevada","docAbstract":"<p>Several U.S. Department of Interior (DOI) agencies are concerned about the cumulative effects of groundwater development on groundwater resources managed by, and other groundwater resources of interest to, these agencies in Snake Valley and surrounding areas. The new water uses that potentially concern the DOI agencies include 12 water-right applications filed in 2005, totaling approximately 8,864 acre-feet per year. To date, only one of these applications has been approved and partially developed. In addition, the DOI agencies are interested in the potential effects of three new water-right applications (UT 18-756, UT 18-758, and UT 18-759) and one water-right change application (UT a40687), which were the subject of a water-right hearing on April 19, 2016.<br></p><p>This report presents a hydrogeologic analysis of areas in and around Snake Valley to assess potential effects of existing and future groundwater development on groundwater resources, specifically groundwater discharge sites, of interest to the DOI agencies. A previously developed steady-state numerical groundwater-flow model was modified to transient conditions with respect to well withdrawals and used to quantify drawdown and capture (withdrawals that result in depletion) of natural discharge from existing and proposed groundwater withdrawals. The original steady-state model simulates and was calibrated to 2009 conditions. To investigate the potential effects of existing and proposed groundwater withdrawals on the groundwater resources of interest to the DOI agencies, 10 withdrawal scenarios were simulated. All scenarios were simulated for periods of 5, 10, 15, 30, 55, and 105 years from the start of 2010; additionally, all scenarios were simulated to a new steady state to determine the ultimate long-term effects of the withdrawals. Capture maps were also constructed as part of this analysis. The simulations used to develop the capture maps test the response of the system, specifically the reduction of natural discharge, to future stresses at a point in the area represented by the model. In this way, these maps can be used as a tool to determine the source of water to, and potential effects at specific areas from, future well withdrawals.<br></p><p>Downward trends in water levels measured in wells indicate that existing groundwater withdrawals in Snake Valley are affecting water levels. The numerical model simulates similar downward trends in water levels; simulated drawdowns in the model, however, are generally less than observed water-level declines. At the groundwater discharge sites of interest to the DOI agencies, simulated drawdowns from existing well withdrawals (projected into the future) range from 0 to about 50 feet. Following the addition of the proposed withdrawals, simulated drawdowns at some sites increase by 25 feet. Simulated drawdown resulting from the proposed withdrawals began in as few as 5 years after 2014 at several of the sites. At the groundwater discharge sites of interest to the DOI agencies, simulated capture of natural discharge resulting from the existing withdrawals ranged from 0 to 87 percent. Following the addition of the proposed withdrawals, simulated capture at several of the sites reached 100 percent, indicating that groundwater discharge at that site would cease. Simulated capture following the addition of the proposed withdrawals increased in as few as 5 years after 2014 at several of the sites.</p><p><br></p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20171026","issn":"2331-1258 (online)","collaboration":"Prepared in cooperation with the U.S. Bureau of Land Management, the U.S. National Park Service, and the U.S. Fish and Wildlife Service","usgsCitation":"Masbruch, M.D., and Brooks, L.E., 2017, Potential effects of existing and proposed groundwater withdrawals on water levels and natural groundwater discharge in Snake Valley and surrounding areas, Utah and Nevada: U.S. Geological Survey Open-File Report 2017–1026, 135 p., https://doi.org/10.3133/ofr20171026.","productDescription":"Report: x, 135 p.; Data Release","numberOfPages":"135","onlineOnly":"Y","additionalOnlineFiles":"Y","ipdsId":"IP-079852","costCenters":[{"id":610,"text":"Utah Water Science Center","active":true,"usgs":true}],"links":[{"id":339732,"rank":3,"type":{"id":30,"text":"Data Release"},"url":"https://dx.doi.org/10.5066/F72N50D2","linkHelpText":"MODFLOW-2000 model used to evaluate potential effects of existing and proposed groundwater withdrawals on water levels and natural groundwater discharge in Snake Valley and surrounding areas, Utah and Nevada"},{"id":339564,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2017/1026/coverthb.jpg"},{"id":339566,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2017/1026/ofr20171026.pdf","text":"Report","size":"9.7 MB","linkFileType":{"id":1,"text":"pdf"}}],"country":"United States","state":"Nevada, Utah","otherGeospatial":"Snake Valley","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -114.5,\n              38\n            ],\n            [\n              -113,\n              38\n            ],\n            [\n              -113,\n              40\n            ],\n            [\n              -114.5,\n              40\n            ],\n            [\n              -114.5,\n              38\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, Utah Water Science Center<br>U.S. Geological Survey<br>2329 West Orton Circle<br>Salt Lake City, UT 84119-2047<br>801 908-5000<br>http://ut.water.usgs.gov/</p>","tableOfContents":"<ul><li>Abstract<br></li><li>Introduction<br></li><li>Hydrogeology<br></li><li>Potential Effects of Groundwater Withdrawals<br></li><li>Model Limitations<br></li><li>Appropriate Uses of the Model<br></li><li>Summary<br></li><li>References Cited<br></li><li>Appendix 1. Capture and Remaining Discharge Maps<br></li></ul>","publishingServiceCenter":{"id":1,"text":"Sacramento PSC"},"publishedDate":"2017-04-14","noUsgsAuthors":false,"publicationDate":"2017-04-14","publicationStatus":"PW","scienceBaseUri":"58f1e0c8e4b08144348b7dec","contributors":{"authors":[{"text":"Masbruch, Melissa D. 0000-0001-6568-160X mmasbruch@usgs.gov","orcid":"https://orcid.org/0000-0001-6568-160X","contributorId":1902,"corporation":false,"usgs":true,"family":"Masbruch","given":"Melissa","email":"mmasbruch@usgs.gov","middleInitial":"D.","affiliations":[{"id":610,"text":"Utah Water Science Center","active":true,"usgs":true}],"preferred":true,"id":690555,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Brooks, Lynette E. 0000-0002-9074-0939 lebrooks@usgs.gov","orcid":"https://orcid.org/0000-0002-9074-0939","contributorId":2718,"corporation":false,"usgs":true,"family":"Brooks","given":"Lynette","email":"lebrooks@usgs.gov","middleInitial":"E.","affiliations":[{"id":610,"text":"Utah Water Science Center","active":true,"usgs":true}],"preferred":true,"id":690556,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
,{"id":70187414,"text":"70187414 - 2017 - Monitoring protocols: Options, approaches, implementation, benefits","interactions":[],"lastModifiedDate":"2017-11-22T16:19:52","indexId":"70187414","displayToPublicDate":"2017-04-14T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":5,"text":"Book chapter"},"publicationSubtype":{"id":24,"text":"Book Chapter"},"title":"Monitoring protocols: Options, approaches, implementation, benefits","docAbstract":"Monitoring and adaptive management are fundamental concepts to rangeland management across land management agencies and embodied as best management practices for private landowners. Historically, rangeland monitoring was limited to determining impacts or maximizing the potential of specific land uses—typically grazing. Over the past several decades, though, the uses of and disturbances to rangelands have increased dramatically against a backdrop of global climate change that adds uncertainty to predictions of future rangeland conditions. Thus, today’s monitoring needs are more complex (or multidimensional) and yet still must be reconciled with the realities of costs to collect requisite data. However, \r\nconceptual advances in rangeland ecology and management and changes in natural resource policies and societal values over the past 25 years have facilitated new approaches to monitoring that can support rangeland management’s diverse information needs. Additionally, advances in sensor technologies and remote-sensing techniques have broadened the suite of rangeland attributes that can be monitored and the temporal and spatial scales at which they can be monitored. We review some of the conceptual and technological advancements and provide examples of how they have influenced rangeland monitoring. We then discuss implications of these developments for rangeland management and highlight what we see as challenges and opportunities for implementing effective rangeland monitoring. We conclude with a vision for how monitoring can contribute to rangeland information needs in the future.","largerWorkType":{"id":4,"text":"Book"},"largerWorkTitle":"Monitoring protocol: Options, approaches, implementation, benefits","language":"English","publisher":"Springer","doi":"10.1007/978-3-319-46709-2_16","usgsCitation":"Karl, J.W., Herrick, J.E., and Pyke, D.A., 2017, Monitoring protocols: Options, approaches, implementation, benefits, chap. <i>of</i> Monitoring protocol: Options, approaches, implementation, benefits, p. 527-567, https://doi.org/10.1007/978-3-319-46709-2_16.","productDescription":"41 p.","startPage":"527","endPage":"567","ipdsId":"IP-066903","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":488627,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1007/978-3-319-46709-2_16","text":"Publisher Index Page"},{"id":340762,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2017-04-14","publicationStatus":"PW","scienceBaseUri":"590aec47e4b0fc4e4492aba3","contributors":{"authors":[{"text":"Karl, Jason W.","contributorId":191703,"corporation":false,"usgs":false,"family":"Karl","given":"Jason","email":"","middleInitial":"W.","affiliations":[{"id":7045,"text":"USDA-ARS Jornada Experimental Range ","active":true,"usgs":false}],"preferred":false,"id":693921,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Herrick, Jeffrey E.","contributorId":26054,"corporation":false,"usgs":false,"family":"Herrick","given":"Jeffrey","email":"","middleInitial":"E.","affiliations":[{"id":12627,"text":"USDA-ARS Jornada Experimental Range, New Mexico State University, Las Cruces, NM 88003-8003, USA","active":true,"usgs":false}],"preferred":false,"id":693922,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Pyke, David A. 0000-0002-4578-8335 david_a_pyke@usgs.gov","orcid":"https://orcid.org/0000-0002-4578-8335","contributorId":3118,"corporation":false,"usgs":true,"family":"Pyke","given":"David","email":"david_a_pyke@usgs.gov","middleInitial":"A.","affiliations":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true},{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true}],"preferred":true,"id":693920,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70202225,"text":"70202225 - 2017 - Spatial variability of CO2 concentrations and biogeochemistry in the Lower Columbia River","interactions":[],"lastModifiedDate":"2019-02-15T15:34:10","indexId":"70202225","displayToPublicDate":"2017-04-13T16:12:47","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1999,"text":"Inland Waters","active":true,"publicationSubtype":{"id":10}},"title":"Spatial variability of CO2 concentrations and biogeochemistry in the Lower Columbia River","docAbstract":"<p><span>Carbon dioxide (CO</span><sub>2</sub><span>) emissions from rivers and other inland waters are thought to be a major component of regional and global carbon cycling. In large managed rivers such as the Columbia River, contemporary ecosystem changes such as damming, nutrient enrichment, and increased water residence times may lead to reduced CO</span><sub>2</sub><span>&nbsp;concentrations (and emissions) due to increased primary production, as has been shown in another large North American river (Upper Mississippi). In this work, spatial patterns of water quality, including dissolved CO</span><sub>2</sub><span>&nbsp;concentrations, were assessed in the Lower Columbia River (LCR) and major tributaries using underway measurements from a small research vessel during July 2016. We observed near-equilibrium CO</span><sub>2</sub><span>&nbsp;conditions and overall weak supersaturation of CO</span><sub>2</sub><span>&nbsp;in the main channel (average 133.8% saturation) and tributaries. We observed only weak correlations between CO</span><sub>2</sub><span>&nbsp;saturation, chlorophyll&nbsp;</span><i>a</i><span>&nbsp;fluorescence, and turbidity, thus not strongly supporting our hypothesis of primary productivity controls. In general, the LCR was clear (low turbidity, mean = 1.48 FNU) and had low chlorophyll fluorescence (mean = 0.177 RFU) during the sampling period. As a whole, the LCR was homogeneous with respect to biogeochemical conditions and showed low spatial variability at &gt;100 km scales. Overall, we find that the LCR is likely a weak summertime source of CO</span><sub>2</sub><span>&nbsp;to the atmosphere, in line with findings from other altered rivers such as the Upper Mississippi.</span></p>","language":"English","publisher":"Taylor & Francis","doi":"10.1080/20442041.2017.1366487","usgsCitation":"Crawford, J.T., Butman, D., Loken, L.C., Stadler, P., Catherine Kuhn, and Striegl, R.G., 2017, Spatial variability of CO2 concentrations and biogeochemistry in the Lower Columbia River: Inland Waters, v. 7, no. 4, p. 417-427, https://doi.org/10.1080/20442041.2017.1366487.","productDescription":"11 p.","startPage":"417","endPage":"427","ipdsId":"IP-085407","costCenters":[{"id":677,"text":"Wisconsin Water Science Center","active":true,"usgs":true},{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"links":[{"id":361274,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","otherGeospatial":"Columbia River","volume":"7","issue":"4","noUsgsAuthors":false,"publicationDate":"2017-09-13","publicationStatus":"PW","contributors":{"authors":[{"text":"Crawford, John T. 0000-0003-4440-6945 jtcrawford@usgs.gov","orcid":"https://orcid.org/0000-0003-4440-6945","contributorId":4081,"corporation":false,"usgs":true,"family":"Crawford","given":"John","email":"jtcrawford@usgs.gov","middleInitial":"T.","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true},{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true}],"preferred":true,"id":757324,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Butman, David 0000-0003-3520-7426 dbutman@usgs.gov","orcid":"https://orcid.org/0000-0003-3520-7426","contributorId":174187,"corporation":false,"usgs":true,"family":"Butman","given":"David","email":"dbutman@usgs.gov","affiliations":[{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":true,"id":757439,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Loken, Luke C. 0000-0003-3194-1498 lloken@usgs.gov","orcid":"https://orcid.org/0000-0003-3194-1498","contributorId":195600,"corporation":false,"usgs":true,"family":"Loken","given":"Luke","email":"lloken@usgs.gov","middleInitial":"C.","affiliations":[{"id":37947,"text":"Upper Midwest Water Science Center","active":true,"usgs":true}],"preferred":true,"id":757325,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Stadler, Philipp","contributorId":195601,"corporation":false,"usgs":false,"family":"Stadler","given":"Philipp","email":"","affiliations":[],"preferred":false,"id":757440,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Catherine Kuhn","contributorId":195602,"corporation":false,"usgs":false,"family":"Catherine Kuhn","affiliations":[],"preferred":false,"id":757441,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Striegl, Robert G. 0000-0002-8251-4659 rstriegl@usgs.gov","orcid":"https://orcid.org/0000-0002-8251-4659","contributorId":1630,"corporation":false,"usgs":true,"family":"Striegl","given":"Robert","email":"rstriegl@usgs.gov","middleInitial":"G.","affiliations":[{"id":37277,"text":"WMA - Earth System Processes Division","active":true,"usgs":true},{"id":200,"text":"Coop Res Unit Seattle","active":true,"usgs":true},{"id":36183,"text":"Hydro-Ecological Interactions Branch","active":true,"usgs":true},{"id":5044,"text":"National Research Program - Central Branch","active":true,"usgs":true}],"preferred":false,"id":757331,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70184202,"text":"fs20173016 - 2017 - Assessment of undiscovered oil and gas resources in the Haynesville Formation, U.S. Gulf Coast, 2016","interactions":[],"lastModifiedDate":"2018-02-15T14:56:33","indexId":"fs20173016","displayToPublicDate":"2017-04-13T09:15:00","publicationYear":"2017","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2017-3016","title":"Assessment of undiscovered oil and gas resources in the Haynesville Formation, U.S. Gulf Coast, 2016","docAbstract":"<p><span>Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean&nbsp;</span><span>resources of 1.1 billion barrels of conventional oil and 195.8 trillion cubic feet of gas in the Upper Jurassic Haynesville Formation in&nbsp;</span><span>onshore lands and State waters of the U.S. Gulf Coast region.</span></p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20173016","usgsCitation":"Paxton, S.T., Pitman, J.K., Kinney, S.A., Gianoutsos, N.J., Pearson, O.N., Whidden, K.J., Dubiel, R.F., Schenk, C.J., Burke, L.A., Klett, T.R., Leathers-Miller, H.M., Mercier, T.J., Haines, S.S., Varela, B.A., Le, P.A., Finn, T.M., Gaswirth, S.B., Hawkins, S.J., Marra, K.R., and Tennyson, M.E., 2017, Assessment of undiscovered oil and gas resources in the Haynesville Formation, U.S. Gulf Coast, 2016: U.S. Geological Survey Fact Sheet 2017–3016, 2 p., https://doi.org/10.3133/fs20173016.","productDescription":"2 p.","onlineOnly":"N","additionalOnlineFiles":"Y","ipdsId":"IP-081350","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":438373,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7DN439P","text":"USGS data release","linkHelpText":"USGS National and Global Oil and Gas Assessment Project-Gulf Coast Mesozoic Province, Haynesville Formation Assessment Units"},{"id":339615,"rank":3,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/publication/fs20173015","text":"Fact Sheet 2017–3015","linkHelpText":"Assessment of undiscovered oil and gas resources in the Bossier Formation, U.S. Gulf Coast, 2016"},{"id":338414,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2017/3016/coverthb2.jpg"},{"id":338415,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2017/3016/fs20173016.pdf","text":"Report","size":"712 KB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2017-3016"}],"country":"United States","state":"Alabama, Arkansas, Florida, Louisiana, Mississippi, Oklahoma, Texas","otherGeospatial":"Gulf Coast, Haynesville Formation","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -102,\n              25\n            ],\n            [\n              -84,\n              25\n            ],\n            [\n              -84,\n              35\n            ],\n            [\n              -102,\n              35\n            ],\n            [\n              -102,\n              25\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, Central Energy Resources Science Center<br>U.S. Geological Survey<br>Box 25046, MS-939<br>Denver Federal Center<br>Denver, CO 80225-0046</p><p><a href=\"https://energy.usgs.gov/\" data-mce-href=\"https://energy.usgs.gov/\">https://energy.usgs.gov</a></p>","tableOfContents":"<ul><li>Introduction</li><li>Geologic Models for Assessment</li><li>Assessment Units</li><li>Undiscovered Resources Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"publishedDate":"2017-04-13","noUsgsAuthors":false,"publicationDate":"2017-04-13","publicationStatus":"PW","scienceBaseUri":"58f08e5ae4b06911a29fa832","contributors":{"authors":[{"text":"Paxton, Stanley T. 0000-0002-9098-1740 spaxton@usgs.gov","orcid":"https://orcid.org/0000-0002-9098-1740","contributorId":739,"corporation":false,"usgs":true,"family":"Paxton","given":"Stanley","email":"spaxton@usgs.gov","middleInitial":"T.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680525,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Pitman, Janet K. 0000-0002-0441-779X 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0000-0001-9849-6742 bvarela@usgs.gov","orcid":"https://orcid.org/0000-0001-9849-6742","contributorId":5058,"corporation":false,"usgs":true,"family":"Varela","given":"Brian","email":"bvarela@usgs.gov","middleInitial":"A.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680533,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Le, Phuong A. 0000-0003-2477-509X ple@usgs.gov","orcid":"https://orcid.org/0000-0003-2477-509X","contributorId":146384,"corporation":false,"usgs":true,"family":"Le","given":"Phuong","email":"ple@usgs.gov","middleInitial":"A.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680534,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Finn, Thomas M. 0000-0001-6396-9351 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shawkins@usgs.gov","orcid":"https://orcid.org/0000-0002-1878-9121","contributorId":4818,"corporation":false,"usgs":true,"family":"Hawkins","given":"Sarah","email":"shawkins@usgs.gov","middleInitial":"J.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680537,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Marra, Kristen R. 0000-0001-8027-5255 kmarra@usgs.gov","orcid":"https://orcid.org/0000-0001-8027-5255","contributorId":4844,"corporation":false,"usgs":true,"family":"Marra","given":"Kristen","email":"kmarra@usgs.gov","middleInitial":"R.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680538,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Tennyson, Marilyn E. 0000-0002-5166-2421 tennyson@usgs.gov","orcid":"https://orcid.org/0000-0002-5166-2421","contributorId":150421,"corporation":false,"usgs":true,"family":"Tennyson","given":"Marilyn E.","email":"tennyson@usgs.gov","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680539,"contributorType":{"id":1,"text":"Authors"},"rank":20}]}}
,{"id":70184197,"text":"fs20173015 - 2017 - Assessment of undiscovered oil and gas resources in the Bossier Formation, U.S. Gulf Coast, 2016","interactions":[],"lastModifiedDate":"2018-02-15T14:56:56","indexId":"fs20173015","displayToPublicDate":"2017-04-13T09:15:00","publicationYear":"2017","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":313,"text":"Fact Sheet","code":"FS","onlineIssn":"2327-6932","printIssn":"2327-6916","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2017-3015","title":"Assessment of undiscovered oil and gas resources in the Bossier Formation, U.S. Gulf Coast, 2016","docAbstract":"<p><span>Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean&nbsp;</span><span>resources of 2.9 billion barrels of conventional oil and 108.6 trillion cubic feet of natural gas in the Upper Jurassic Bossier Formation in&nbsp;</span><span>onshore lands and State waters of the U.S. Gulf Coast region.</span></p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/fs20173015","usgsCitation":"Paxton, S.T., Pitman, J.K., Kinney, S.A., Gianoutsos, N.J., Pearson, O.N., Whidden, K.J., Dubiel, R.F., Schenk, C.J., Burke, L.A., Klett, T.R., Leathers-Miller, H.M., Mercier, T.J., Haines, S.S., Varela, B.A., Le, P.A., Finn, T.M., Gaswirth, S.B., Hawkins, S.J., Marra, K.R., and Tennyson, M.E., 2017, Assessment of undiscovered oil and gas resources in the Bossier Formation, U.S. Gulf Coast, 2016: U.S. Geological Survey Fact Sheet 2017–3015, 2 p., https://doi.org/10.3133/fs20173015.","productDescription":"2 p.","onlineOnly":"N","additionalOnlineFiles":"Y","ipdsId":"IP-081349","costCenters":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":438372,"rank":4,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7707ZP0","text":"USGS data release","linkHelpText":"USGS National and Global Oil and Gas Assessment Project-Gulf Coast Mesozoic Province, Bossier Formation Assessment Units"},{"id":339614,"rank":3,"type":{"id":22,"text":"Related Work"},"url":"https://pubs.usgs.gov/publication/fs20173016","text":"Fact Sheet 2017-3016","linkHelpText":"- Assessment of undiscovered oil and gas resources in the Haynesville Formation, U.S. Gulf Coast, 2016"},{"id":338407,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/fs/2017/3015/coverthb2.jpg"},{"id":338408,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/fs/2017/3015/fs20173015.pdf","text":"Report","size":"648 KB","linkFileType":{"id":1,"text":"pdf"},"description":"FS 2017-3015"}],"country":"United States","state":"Alabama, Arkansas, Florida, Louisiana, Mississippi, Oklahoma, Texas","otherGeospatial":"Gulf Coast, Upper Jurassic Bossier Formation","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -102,\n              25\n            ],\n            [\n              -84,\n              25\n            ],\n            [\n              -84,\n              35\n            ],\n            [\n              -102,\n              35\n            ],\n            [\n              -102,\n              25\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, Central Energy Resources Science Center<br>U.S. Geological Survey<br>Box 25046, MS-939<br>Denver Federal Center<br>Denver, CO 80225-0046</p><p><a href=\"http://energy.usgs.gov/\" data-mce-href=\"http://energy.usgs.gov/\">http://energy.usgs.gov</a></p>","tableOfContents":"<ul><li>Introduction</li><li>Geologic Models for Assessment</li><li>Assessment Units</li><li>Undiscovered Resources Summary</li><li>References Cited</li></ul>","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"publishedDate":"2017-04-13","noUsgsAuthors":false,"publicationDate":"2017-04-13","publicationStatus":"PW","scienceBaseUri":"58f08e5ce4b06911a29fa834","contributors":{"authors":[{"text":"Paxton, Stanley T. 0000-0002-9098-1740 spaxton@usgs.gov","orcid":"https://orcid.org/0000-0002-9098-1740","contributorId":739,"corporation":false,"usgs":true,"family":"Paxton","given":"Stanley","email":"spaxton@usgs.gov","middleInitial":"T.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680491,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Pitman, Janet K. 0000-0002-0441-779X jpitman@usgs.gov","orcid":"https://orcid.org/0000-0002-0441-779X","contributorId":767,"corporation":false,"usgs":true,"family":"Pitman","given":"Janet","email":"jpitman@usgs.gov","middleInitial":"K.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true},{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680492,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Kinney, Scott A. 0000-0001-5008-5813 skinney@usgs.gov","orcid":"https://orcid.org/0000-0001-5008-5813","contributorId":1395,"corporation":false,"usgs":true,"family":"Kinney","given":"Scott","email":"skinney@usgs.gov","middleInitial":"A.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680509,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Gianoutsos, Nicholas J. 0000-0002-6510-6549 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kwhidden@usgs.gov","orcid":"https://orcid.org/0000-0002-7841-2553","contributorId":3960,"corporation":false,"usgs":true,"family":"Whidden","given":"Katherine","email":"kwhidden@usgs.gov","middleInitial":"J.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true},{"id":255,"text":"Energy Resources Program","active":true,"usgs":true}],"preferred":true,"id":680505,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Dubiel, Russell F. 0000-0002-1280-0350 rdubiel@usgs.gov","orcid":"https://orcid.org/0000-0002-1280-0350","contributorId":1294,"corporation":false,"usgs":true,"family":"Dubiel","given":"Russell","email":"rdubiel@usgs.gov","middleInitial":"F.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680510,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Schenk, Christopher J. 0000-0002-0248-7305 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tklett@usgs.gov","orcid":"https://orcid.org/0000-0001-9779-1168","contributorId":147382,"corporation":false,"usgs":true,"family":"Klett","given":"Timothy","email":"tklett@usgs.gov","middleInitial":"R.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680502,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Leathers-Miller, Heidi M. 0000-0001-5208-9906 hleathers@usgs.gov","orcid":"https://orcid.org/0000-0001-5208-9906","contributorId":149262,"corporation":false,"usgs":true,"family":"Leathers-Miller","given":"Heidi","email":"hleathers@usgs.gov","middleInitial":"M.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680501,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Mercier, Tracey J. 0000-0002-8232-525X tmercier@usgs.gov","orcid":"https://orcid.org/0000-0002-8232-525X","contributorId":2847,"corporation":false,"usgs":true,"family":"Mercier","given":"Tracey","email":"tmercier@usgs.gov","middleInitial":"J.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680500,"contributorType":{"id":1,"text":"Authors"},"rank":12},{"text":"Haines, Seth S. 0000-0003-2611-8165 shaines@usgs.gov","orcid":"https://orcid.org/0000-0003-2611-8165","contributorId":1344,"corporation":false,"usgs":true,"family":"Haines","given":"Seth","email":"shaines@usgs.gov","middleInitial":"S.","affiliations":[{"id":255,"text":"Energy Resources Program","active":true,"usgs":true},{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true},{"id":191,"text":"Colorado Water Science Center","active":true,"usgs":true}],"preferred":true,"id":680508,"contributorType":{"id":1,"text":"Authors"},"rank":13},{"text":"Varela, Brian A. 0000-0001-9849-6742 bvarela@usgs.gov","orcid":"https://orcid.org/0000-0001-9849-6742","contributorId":5058,"corporation":false,"usgs":true,"family":"Varela","given":"Brian","email":"bvarela@usgs.gov","middleInitial":"A.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680499,"contributorType":{"id":1,"text":"Authors"},"rank":14},{"text":"Le, Phuong A. 0000-0003-2477-509X ple@usgs.gov","orcid":"https://orcid.org/0000-0003-2477-509X","contributorId":2151,"corporation":false,"usgs":true,"family":"Le","given":"Phuong A.","email":"ple@usgs.gov","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680498,"contributorType":{"id":1,"text":"Authors"},"rank":15},{"text":"Finn, Thomas M. 0000-0001-6396-9351 finn@usgs.gov","orcid":"https://orcid.org/0000-0001-6396-9351","contributorId":778,"corporation":false,"usgs":true,"family":"Finn","given":"Thomas","email":"finn@usgs.gov","middleInitial":"M.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680497,"contributorType":{"id":1,"text":"Authors"},"rank":16},{"text":"Gaswirth, Stephanie B. 0000-0001-5821-6347 sgaswirth@usgs.gov","orcid":"https://orcid.org/0000-0001-5821-6347","contributorId":147385,"corporation":false,"usgs":true,"family":"Gaswirth","given":"Stephanie","email":"sgaswirth@usgs.gov","middleInitial":"B.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680496,"contributorType":{"id":1,"text":"Authors"},"rank":17},{"text":"Hawkins, Sarah J. 0000-0002-1878-9121 shawkins@usgs.gov","orcid":"https://orcid.org/0000-0002-1878-9121","contributorId":4818,"corporation":false,"usgs":true,"family":"Hawkins","given":"Sarah","email":"shawkins@usgs.gov","middleInitial":"J.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680495,"contributorType":{"id":1,"text":"Authors"},"rank":18},{"text":"Marra, Kristen R. 0000-0001-8027-5255 kmarra@usgs.gov","orcid":"https://orcid.org/0000-0001-8027-5255","contributorId":4844,"corporation":false,"usgs":true,"family":"Marra","given":"Kristen","email":"kmarra@usgs.gov","middleInitial":"R.","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":680494,"contributorType":{"id":1,"text":"Authors"},"rank":19},{"text":"Tennyson, Marilyn E. 0000-0002-5166-2421 tennyson@usgs.gov","orcid":"https://orcid.org/0000-0002-5166-2421","contributorId":150421,"corporation":false,"usgs":true,"family":"Tennyson","given":"Marilyn E.","email":"tennyson@usgs.gov","affiliations":[{"id":164,"text":"Central Energy Resources Science Center","active":true,"usgs":true}],"preferred":false,"id":680493,"contributorType":{"id":1,"text":"Authors"},"rank":20}]}}
,{"id":70186814,"text":"ofr20171040 - 2017 - Effects of experimental removal of barred owls on population demography of northern spotted owls in Washington and Oregon—2016 progress report","interactions":[],"lastModifiedDate":"2017-11-22T14:27:16","indexId":"ofr20171040","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":5,"text":"USGS Numbered Series"},"seriesTitle":{"id":330,"text":"Open-File Report","code":"OFR","onlineIssn":"2331-1258","printIssn":"0196-1497","active":true,"publicationSubtype":{"id":5}},"seriesNumber":"2017-1040","title":"Effects of experimental removal of barred owls on population demography of northern spotted owls in Washington and Oregon—2016 progress report","docAbstract":"<p class=\"p1\">Evidence indicates that competition with invasive barred owls (<i>Strix varia</i>) is causing rapid declines in populations of northern spotted owls (<i>S. occidentalis caurina</i>), and that the long-term persistence of spotted owls may be in question without additional management intervention. A pilot study in California showed that removal of barred owls in combination with habitat conservation may be able to slow or even reverse population declines of spotted owls at local scales, but it remains unknown whether similar results can be obtained in areas with different forest conditions and a greater density of barred owls. In 2015, we implemented a before-after-control-impact (BACI) experimental design on three study areas in Oregon and Washington with at least 20 years of pre-treatment demographic data on spotted owls to determine if removal of barred owls can improve localized population trends of spotted owls. Here, we report on research accomplishments and preliminary results from the first 21 months (March 2015–December 2016) of the planned 5-year experiment.</p>","language":"English","publisher":"U.S. Geological Survey","publisherLocation":"Reston, VA","doi":"10.3133/ofr20171040","collaboration":"Prepared in cooperation with U.S. Fish and Wildlife Service, Bureau of Land Management, and U.S. Forest Service","usgsCitation":"Wiens, J.D., Dugger, K.M., Lewicki, K.E., and Simon, D.C., 2017, Effects of experimental removal of barred owls on population demography of northern spotted owls in Washington and Oregon—2016 progress report: U.S. Geological Survey Open-File Report 2017-1040, 23 p., https://doi.org/10.3133/ofr20171040.","productDescription":"iv, 23 p.","numberOfPages":"32","onlineOnly":"Y","ipdsId":"IP-084885","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":339711,"rank":1,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/of/2017/1040/coverthb.jpg"},{"id":339712,"rank":2,"type":{"id":11,"text":"Document"},"url":"https://pubs.usgs.gov/of/2017/1040/ofr20171040.pdf","text":"Report","size":"5.1 MB","linkFileType":{"id":1,"text":"pdf"},"description":"OFR 2017-1040"}],"country":"United States","state":"Oregon, Washington","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -123.94775390625,\n              42.4234565179383\n            ],\n            [\n              -120.10253906249999,\n              42.4234565179383\n            ],\n            [\n              -120.10253906249999,\n              47.945786463687185\n            ],\n            [\n              -123.94775390625,\n              47.945786463687185\n            ],\n            [\n              -123.94775390625,\n              42.4234565179383\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","contact":"<p>Director, Forest and Rangeland Ecosystem Science Center<br> U.S. Geological Survey<br> 777 NW 9th St., Suite 400<br> Corvallis, Oregon 97330<br> <a href=\"http://fresc.usgs.gov/\" target=\"blank\" data-mce-href=\"http://fresc.usgs.gov/\">http://fresc.usgs.gov/</a></p>","tableOfContents":"<ul><li>Abstract<br></li><li>Background and Study Objectives<br></li><li>Experimental Study Areas<br></li><li>Methods<br></li><li>Preliminary Results, March 2015–December 2016<br></li><li>Associated Research Activities<br></li><li>Summary<br></li><li>Schedule to Completion<br></li><li>Acknowledgments<br></li><li>References Cited<br></li><li>Appendixes A–D<br></li></ul>","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"publishedDate":"2017-04-13","noUsgsAuthors":false,"publicationDate":"2017-04-13","publicationStatus":"PW","scienceBaseUri":"58f08e5fe4b06911a29fa844","contributors":{"authors":[{"text":"Wiens, J. David 0000-0002-2020-038X jwiens@usgs.gov","orcid":"https://orcid.org/0000-0002-2020-038X","contributorId":468,"corporation":false,"usgs":true,"family":"Wiens","given":"J.","email":"jwiens@usgs.gov","middleInitial":"David","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true}],"preferred":false,"id":690630,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Dugger, Katie M. 0000-0002-4148-246X","orcid":"https://orcid.org/0000-0002-4148-246X","contributorId":36037,"corporation":false,"usgs":true,"family":"Dugger","given":"Katie","email":"","middleInitial":"M.","affiliations":[{"id":517,"text":"Oregon Cooperative Fish and Wildlife Research Unit","active":false,"usgs":true}],"preferred":false,"id":690631,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Lewicki, Krista E. 0000-0001-6041-7877 kelewicki@usgs.gov","orcid":"https://orcid.org/0000-0001-6041-7877","contributorId":167539,"corporation":false,"usgs":true,"family":"Lewicki","given":"Krista","email":"kelewicki@usgs.gov","middleInitial":"E.","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true}],"preferred":false,"id":690632,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Simon, David C. 0000-0003-2621-2311 dsimon@usgs.gov","orcid":"https://orcid.org/0000-0003-2621-2311","contributorId":167540,"corporation":false,"usgs":true,"family":"Simon","given":"David","email":"dsimon@usgs.gov","middleInitial":"C.","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true},{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":false,"id":690633,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70187075,"text":"70187075 - 2017 - δ13C and d15N in the endangered Kemp’s ridley sea turtle Lepidochelys kempii after the Deepwater Horizon oil spill","interactions":[],"lastModifiedDate":"2020-12-16T16:53:18.789724","indexId":"70187075","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1497,"text":"Endangered Species Research","active":true,"publicationSubtype":{"id":10}},"displayTitle":"δ<sup>13</sup>C and d<sup>15</sup>N in the endangered Kemp’s ridley sea turtle <i>Lepidochelys kempii</i> after the <i>Deepwater Horizon</i> oil spill","title":"δ13C and d15N in the endangered Kemp’s ridley sea turtle Lepidochelys kempii after the Deepwater Horizon oil spill","docAbstract":"<p><span>The </span><i>Deepwater Horizon</i><span> explosion in April 2010 and subsequent oil spill released 3.19 × 10</span><sup>6</sup><span> barrels (5.07 × 10</span><sup>8</sup><span> L) of MC252 crude oil into important foraging areas of the endangered Kemp’s ridley sea turtle </span><i>Lepidochelys kempii</i><span> (</span><i>Lk</i><span>) in the northern Gulf of Mexico (GoM). We measured δ</span><sup>13</sup><span>C and δ</span><sup>15</sup><span>N in scute biopsy samples from 33 </span><i>Lk</i><span> nesting in Texas during 2010–-12. Of these, 27 were equipped with satellite transmitters and were tracked to traditional foraging areas in the northern GoM after the spill. Differences in δ</span><sup>13</sup><span>C between the oldest and newest scute layers from 2010 nesters were not significantly different, but δ</span><sup>13</sup><span>C in the newest layers from 2011 and 2012 nesters was significantly lower compared to 2010. δ</span><sup>15</sup><span>N differences were not statistically significant. Collectively, the stable isotope and tracking data indicate that the lower δ</span><sup>13</sup><span>C values reflect the incorporation of oil rather than changes in diet or foraging area. Discriminant analysis indicated that 51.5% of the turtles sampled had isotope signatures indicating oil exposure. Growth of the </span><i>Lk</i><span> population slowed in the years following the spill. The involvement of oil exposure in recent population trends is unknown, but long-term effects may not be evident for many years. Our results indicate that C isotope signatures in scutes may be useful biomarkers of sea turtle exposure to oil.</span></p>","language":"English","publisher":"Inter-Research","publisherLocation":"Oldendorf/Luhe","doi":"10.3354/esr00819","usgsCitation":"Reich, K.J., Lopez-Castro, M.C., Shaver, D.J., Iseton, C., Hart, K.M., Hooper, M.J., and Schmitt, C.J., 2017, δ13C and d15N in the endangered Kemp’s ridley sea turtle Lepidochelys kempii after the Deepwater Horizon oil spill: Endangered Species Research, v. 33, p. 281-289, https://doi.org/10.3354/esr00819.","productDescription":"9 p.","startPage":"281","endPage":"289","ipdsId":"IP-076594","costCenters":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"links":[{"id":469928,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.3354/esr00819","text":"Publisher Index Page"},{"id":438375,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F70C4SXJ","text":"USGS data release","linkHelpText":"Data tables in support of manuscript &quot;&amp;#8203;&amp;#948;13C and &amp;#948;15N in the Endangered Kemp's Ridley Sea Turtle Lepidochelys kempii After the Deepwater Horizon Oil Spill&quot;"},{"id":340065,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"otherGeospatial":"Gulf of Mexico","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -98,\n              25\n            ],\n            [\n              -84,\n              25\n            ],\n            [\n              -84,\n              31\n            ],\n            [\n              -98,\n              31\n            ],\n            [\n              -98,\n              25\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"33","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58fb1a4be4b0c3010a8087b5","contributors":{"authors":[{"text":"Reich, Kimberly J.","contributorId":175452,"corporation":false,"usgs":false,"family":"Reich","given":"Kimberly","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":692331,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Lopez-Castro, Melania C.","contributorId":191185,"corporation":false,"usgs":false,"family":"Lopez-Castro","given":"Melania","email":"","middleInitial":"C.","affiliations":[],"preferred":false,"id":692332,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Shaver, Donna J.","contributorId":191186,"corporation":false,"usgs":false,"family":"Shaver","given":"Donna","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":692333,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Iseton, Claire","contributorId":191187,"corporation":false,"usgs":false,"family":"Iseton","given":"Claire","email":"","affiliations":[],"preferred":false,"id":692334,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hart, Kristen M. 0000-0002-5257-7974 kristen_hart@usgs.gov","orcid":"https://orcid.org/0000-0002-5257-7974","contributorId":1966,"corporation":false,"usgs":true,"family":"Hart","given":"Kristen","email":"kristen_hart@usgs.gov","middleInitial":"M.","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"preferred":true,"id":692335,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Hooper, Michael J. 0000-0002-4161-8961 mhooper@usgs.gov","orcid":"https://orcid.org/0000-0002-4161-8961","contributorId":3251,"corporation":false,"usgs":true,"family":"Hooper","given":"Michael","email":"mhooper@usgs.gov","middleInitial":"J.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":692336,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Schmitt, Christopher J. 0000-0001-6804-2360 cjschmitt@usgs.gov","orcid":"https://orcid.org/0000-0001-6804-2360","contributorId":491,"corporation":false,"usgs":true,"family":"Schmitt","given":"Christopher","email":"cjschmitt@usgs.gov","middleInitial":"J.","affiliations":[{"id":192,"text":"Columbia Environmental Research Center","active":true,"usgs":true}],"preferred":true,"id":692330,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70189161,"text":"70189161 - 2017 - The Nitrogen Footprint Tool network: A multi-institution program to reduce nitrogen pollution","interactions":[],"lastModifiedDate":"2017-07-05T09:21:09","indexId":"70189161","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3504,"text":"Sustainability","active":true,"publicationSubtype":{"id":10}},"title":"The Nitrogen Footprint Tool network: A multi-institution program to reduce nitrogen pollution","docAbstract":"Anthropogenic sources of reactive nitrogen have local and global impacts on air and water quality and detrimental effects on human and ecosystem health. This paper uses the nitrogen footprint tool (NFT) to determine the amount of nitrogen (N) released as a result of institutional consumption. The sectors accounted for include food (consumption and upstream production), energy, transportation, fertilizer, research animals, and agricultural research. The NFT is then used for scenario analysis to manage and track reductions, which are driven by the consumption behaviors of both the institution itself and its constituent individuals. In this paper, the first seven completed institution nitrogen footprint results are presented. The institution NFT network aims to develop footprints for many institutions to encourage widespread upper-level management strategies that will create significant reductions in reactive nitrogen released to the environment. Energy use and food purchases are the two largest sectors contributing to institution nitrogen footprints. Ongoing efforts by institutions to reduce greenhouse gas emissions also help to reduce the nitrogen footprint, but the impact of food production on nitrogen pollution has not been directly addressed by the higher-ed sustainability community. The NFT Network found that institutions could reduce their nitrogen footprints by optimizing food purchasing to reduce consumption of animal products and minimize food waste, as well as reducing dependence on fossil fuels for energy.","language":"English","publisher":"Mary Ann Liebert, Inc","doi":"10.1089/sus.2017.29098.eac","usgsCitation":"Castner, E.A., Leah, A.M., Leary, N., Baron, J., Compton, J.E., Galloway, J.N., Hastings, M.G., Kimiecik, J., Lantz-Trissel, J., de la Riguera, E., and Ryals, R., 2017, The Nitrogen Footprint Tool network: A multi-institution program to reduce nitrogen pollution: Sustainability, v. 10, no. 2, p. 79-88, https://doi.org/10.1089/sus.2017.29098.eac.","productDescription":"10 p. ","startPage":"79","endPage":"88","ipdsId":"IP-084847","costCenters":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"links":[{"id":469925,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1089/sus.2017.29098.eac","text":"Publisher Index Page"},{"id":343283,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"10","issue":"2","publishingServiceCenter":{"id":2,"text":"Denver PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"595ca913e4b0d1f9f054ca14","contributors":{"authors":[{"text":"Castner, Elizabeth A.","contributorId":194131,"corporation":false,"usgs":false,"family":"Castner","given":"Elizabeth","email":"","middleInitial":"A.","affiliations":[],"preferred":false,"id":703276,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Leah, Allison M.","contributorId":194132,"corporation":false,"usgs":false,"family":"Leah","given":"Allison","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":703277,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Leary, Neal","contributorId":194133,"corporation":false,"usgs":false,"family":"Leary","given":"Neal","email":"","affiliations":[],"preferred":false,"id":703278,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Baron, Jill 0000-0002-5902-6251 jill_baron@usgs.gov","orcid":"https://orcid.org/0000-0002-5902-6251","contributorId":194124,"corporation":false,"usgs":true,"family":"Baron","given":"Jill","email":"jill_baron@usgs.gov","affiliations":[{"id":291,"text":"Fort Collins Science Center","active":true,"usgs":true}],"preferred":true,"id":703275,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Compton, Jana E.","contributorId":194134,"corporation":false,"usgs":false,"family":"Compton","given":"Jana","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":703279,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Galloway, James N.","contributorId":194135,"corporation":false,"usgs":false,"family":"Galloway","given":"James","email":"","middleInitial":"N.","affiliations":[],"preferred":false,"id":703280,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Hastings, Meredith G.","contributorId":194136,"corporation":false,"usgs":false,"family":"Hastings","given":"Meredith","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":703281,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Kimiecik, Jacob","contributorId":194125,"corporation":false,"usgs":false,"family":"Kimiecik","given":"Jacob","email":"","affiliations":[],"preferred":false,"id":703282,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Lantz-Trissel, Jonathan","contributorId":194137,"corporation":false,"usgs":false,"family":"Lantz-Trissel","given":"Jonathan","email":"","affiliations":[],"preferred":false,"id":703283,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"de la Riguera, Elizabeth","contributorId":194138,"corporation":false,"usgs":false,"family":"de la Riguera","given":"Elizabeth","email":"","affiliations":[],"preferred":false,"id":703284,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Ryals, Rebecca","contributorId":194139,"corporation":false,"usgs":false,"family":"Ryals","given":"Rebecca","affiliations":[],"preferred":false,"id":703285,"contributorType":{"id":1,"text":"Authors"},"rank":11}]}}
,{"id":70186888,"text":"70186888 - 2017 - Geogenic organic contaminants in the low-rank coal-bearing Carrizo-Wilcox aquifer of East Texas, USA","interactions":[],"lastModifiedDate":"2017-05-24T10:18:54","indexId":"70186888","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1923,"text":"Hydrogeology Journal","active":true,"publicationSubtype":{"id":10}},"title":"Geogenic organic contaminants in the low-rank coal-bearing Carrizo-Wilcox aquifer of East Texas, USA","docAbstract":"<p><span>The organic composition of groundwater along the Carrizo-Wilcox aquifer in East Texas (USA), sampled from rural wells in May and September 2015, was examined as part of a larger study of the potential health and environmental effects of organic compounds derived from low-rank coals. The quality of water from the low-rank coal-bearing Carrizo-Wilcox aquifer is a potential environmental concern and no detailed studies of the organic compounds in this aquifer have been published. Organic compounds identified in the water samples included: aliphatics and their fatty acid derivatives, phenols, biphenyls, N-, O-, and S-containing heterocyclic compounds, polycyclic aromatic hydrocarbons (PAHs), aromatic amines, and phthalates. Many of the identified organic compounds (aliphatics, phenols, heterocyclic compounds, PAHs) are geogenic and originated from groundwater leaching of young and unmetamorphosed low-rank coals. Estimated concentrations of individual compounds ranged from about 3.9 to 0.01&nbsp;μg/L. In many rural areas in East Texas, coal strata provide aquifers for drinking water wells. Organic compounds observed in groundwater are likely to be present in drinking water supplied from wells that penetrate the coal. Some of the organic compounds identified in the water samples are potentially toxic to humans, but at the estimated levels in these samples, the compounds are unlikely to cause acute health problems. The human health effects of low-level chronic exposure to coal-derived organic compounds in drinking water in East Texas are currently unknown, and continuing studies will evaluate possible toxicity.</span></p>","language":"English","publisher":"Springer","doi":"10.1007/s10040-016-1508-6","usgsCitation":"Chakraborty, J., Varonka, M.S., Orem, W.H., Finkelman, R.B., and Manton, W., 2017, Geogenic organic contaminants in the low-rank coal-bearing Carrizo-Wilcox aquifer of East Texas, USA: Hydrogeology Journal, v. 25, no. 4, p. 1219-1228, https://doi.org/10.1007/s10040-016-1508-6.","productDescription":"10 p.","startPage":"1219","endPage":"1228","ipdsId":"IP-076592","costCenters":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"links":[{"id":339690,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Texas","otherGeospatial":"Carrizo-Wilcox Aquifer","volume":"25","issue":"4","publishingServiceCenter":{"id":9,"text":"Reston PSC"},"noUsgsAuthors":false,"publicationDate":"2017-01-07","publicationStatus":"PW","scienceBaseUri":"58f08e5ee4b06911a29fa83e","contributors":{"authors":[{"text":"Chakraborty, Jayeeta","contributorId":190842,"corporation":false,"usgs":false,"family":"Chakraborty","given":"Jayeeta","email":"","affiliations":[],"preferred":false,"id":690860,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Varonka, Matthew S. 0000-0003-3620-5262 mvaronka@usgs.gov","orcid":"https://orcid.org/0000-0003-3620-5262","contributorId":4726,"corporation":false,"usgs":true,"family":"Varonka","given":"Matthew","email":"mvaronka@usgs.gov","middleInitial":"S.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":690859,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Orem, William H. 0000-0003-4990-0539 borem@usgs.gov","orcid":"https://orcid.org/0000-0003-4990-0539","contributorId":577,"corporation":false,"usgs":true,"family":"Orem","given":"William","email":"borem@usgs.gov","middleInitial":"H.","affiliations":[{"id":241,"text":"Eastern Energy Resources Science Center","active":true,"usgs":true}],"preferred":true,"id":690861,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Finkelman, Robert B.","contributorId":85951,"corporation":false,"usgs":true,"family":"Finkelman","given":"Robert","email":"","middleInitial":"B.","affiliations":[],"preferred":false,"id":690862,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Manton, William","contributorId":190844,"corporation":false,"usgs":false,"family":"Manton","given":"William","email":"","affiliations":[],"preferred":false,"id":690863,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70186890,"text":"70186890 - 2017 - Geomorphic process from topographic form: automating the interpretation of repeat survey data in river valleys","interactions":[],"lastModifiedDate":"2017-09-18T15:43:24","indexId":"70186890","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":1425,"text":"Earth Surface Processes and Landforms","active":true,"publicationSubtype":{"id":10}},"title":"Geomorphic process from topographic form: automating the interpretation of repeat survey data in river valleys","docAbstract":"<p><span>The ability to quantify the processes driving geomorphic change in river valley margins is vital to geomorphologists seeking to understand the relative role of transport mechanisms (e.g. fluvial, aeolian, and hillslope processes) in landscape dynamics. High-resolution, repeat topographic data are becoming readily available to geomorphologists. By contrasting digital elevation models derived from repeat surveys, the transport processes driving topographic changes can be inferred, a method termed ‘mechanistic segregation.’ Unfortunately, mechanistic segregation largely relies on subjective and time consuming manual classification, which has implications both for its reproducibility and the practical scale of its application. Here we present a novel computational workflow for the mechanistic segregation of geomorphic transport processes in geospatial datasets. We apply the workflow to seven sites along the Colorado River in the Grand Canyon, where geomorphic transport is driven by a diverse suite of mechanisms. The workflow performs well when compared to field observations, with an overall predictive accuracy of 84% across 113 validation points. The approach most accurately predicts changes due to fluvial processes (100% accuracy) and aeolian processes (96%), with reduced accuracy in predictions of alluvial and colluvial processes (64% and 73%, respectively). Our workflow is designed to be applicable to a diversity of river systems and will likely provide a rapid and objective understanding of the processes driving geomorphic change at the reach and network scales. We anticipate that such an understanding will allow insight into the response of geomorphic transport processes to external forcings, such as shifts in climate, land use, or river regulation, with implications for process-based river management and restoration. </span></p>","language":"English","publisher":"Wiley","doi":"10.1002/esp.4143","usgsCitation":"Kasprak, A., Caster, J.J., Bangen, S.G., and Sankey, J.B., 2017, Geomorphic process from topographic form: automating the interpretation of repeat survey data in river valleys: Earth Surface Processes and Landforms, v. 42, no. 12, p. 1872-1883, https://doi.org/10.1002/esp.4143.","productDescription":"12 p.","startPage":"1872","endPage":"1883","ipdsId":"IP-079655","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":438376,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F73776X6","text":"USGS data release","linkHelpText":"Geomorphic Process from Topographic FormData &amp;amp; Models"},{"id":339687,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Arizona, Colorado","otherGeospatial":"Colorado River, Grand Canyon","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -113.8787841796875,\n              35.67068501330236\n            ],\n            [\n              -111.258544921875,\n              35.67068501330236\n            ],\n            [\n              -111.258544921875,\n              37.077093191754436\n            ],\n            [\n              -113.8787841796875,\n              37.077093191754436\n            ],\n            [\n              -113.8787841796875,\n              35.67068501330236\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","volume":"42","issue":"12","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2017-04-10","publicationStatus":"PW","scienceBaseUri":"58f08e5de4b06911a29fa83c","contributors":{"authors":[{"text":"Kasprak, Alan 0000-0001-8184-6128 akasprak@usgs.gov","orcid":"https://orcid.org/0000-0001-8184-6128","contributorId":190848,"corporation":false,"usgs":true,"family":"Kasprak","given":"Alan","email":"akasprak@usgs.gov","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":690869,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Caster, Joshua J. 0000-0002-2858-1228 jcaster@usgs.gov","orcid":"https://orcid.org/0000-0002-2858-1228","contributorId":131114,"corporation":false,"usgs":true,"family":"Caster","given":"Joshua","email":"jcaster@usgs.gov","middleInitial":"J.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":false,"id":690902,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bangen, Sara G.","contributorId":190858,"corporation":false,"usgs":false,"family":"Bangen","given":"Sara","email":"","middleInitial":"G.","affiliations":[],"preferred":false,"id":690903,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Sankey, Joel B. 0000-0003-3150-4992 jsankey@usgs.gov","orcid":"https://orcid.org/0000-0003-3150-4992","contributorId":3935,"corporation":false,"usgs":true,"family":"Sankey","given":"Joel","email":"jsankey@usgs.gov","middleInitial":"B.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":690904,"contributorType":{"id":1,"text":"Authors"},"rank":4}]}}
,{"id":70186893,"text":"70186893 - 2017 - Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV)","interactions":[],"lastModifiedDate":"2017-04-13T12:40:04","indexId":"70186893","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2177,"text":"Journal of Aquatic Animal Health","active":true,"publicationSubtype":{"id":10}},"title":"Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV)","docAbstract":"Methods for a plaque neutralization test (PNT) were optimized for the detection and quantification of viral hemorrhagic septicemia virus (VHSV) neutralizing activity in the plasma of Pacific Herring Clupea pallasii. The PNT was complement dependent, as neutralizing activity was attenuated by heat inactivation; further, neutralizing activity was mostly restored by the addition of exogenous complement from specific-pathogen-free Pacific Herring. Optimal methods included the overnight incubation of VHSV aliquots in serial dilutions (starting at 1:16) of whole test plasma containing endogenous complement. The resulting viral titers were then enumerated using a viral plaque assay in 96-well microplates. Serum neutralizing activity was virus-specific as plasma from viral hemorrhagic septicemia (VHS) survivors demonstrated only negligible reactivity to infectious hematopoietic necrosis virus, a closely related rhabdovirus. Among Pacific Herring that survived VHSV exposure, neutralizing activity was detected in the plasma as early as 37 d postexposure and peaked at approximately 64 d postexposure. The onset of neutralizing activity was slightly delayed in fish reared at 7.4°C relative to those in warmer temperatures (9.9°C and 13.1°C); however, neutralizing activity persisted for at least 345 d postexposure in all temperature treatments. It is anticipated that this novel ability to assess VHSV neutralizing activity in Pacific Herring will enable retrospective comparisons between prior VHS infections and year-class recruitment failures. Additionally, the optimized PNT could be employed as a forecasting tool capable of identifying the potential for future VHS epizootics in wild Pacific Herring populations.","language":"English","publisher":"Taylor & Francis","doi":"10.1080/08997659.2017.1285369","usgsCitation":"Hart, L., MacKenzie, A., Purcell, M.K., Thompson, R.L., and Hershberger, P., 2017, Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV): Journal of Aquatic Animal Health, v. 29, no. 2, p. 74-82, https://doi.org/10.1080/08997659.2017.1285369.","productDescription":"9 p.","startPage":"74","endPage":"82","ipdsId":"IP-081264","costCenters":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"links":[{"id":339684,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"29","issue":"2","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2017-04-04","publicationStatus":"PW","scienceBaseUri":"58f08e5de4b06911a29fa83a","contributors":{"authors":[{"text":"Hart, Lucas 0000-0001-7035-8778 lhart@usgs.gov","orcid":"https://orcid.org/0000-0001-7035-8778","contributorId":140133,"corporation":false,"usgs":true,"family":"Hart","given":"Lucas","email":"lhart@usgs.gov","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":690886,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"MacKenzie, Ashley 0000-0002-7402-7877 amackenzie@usgs.gov","orcid":"https://orcid.org/0000-0002-7402-7877","contributorId":150817,"corporation":false,"usgs":true,"family":"MacKenzie","given":"Ashley","email":"amackenzie@usgs.gov","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":690887,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Purcell, Maureen K. 0000-0003-0154-8433 mpurcell@usgs.gov","orcid":"https://orcid.org/0000-0003-0154-8433","contributorId":168475,"corporation":false,"usgs":true,"family":"Purcell","given":"Maureen","email":"mpurcell@usgs.gov","middleInitial":"K.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":690888,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Thompson, Rachel L. 0000-0001-6901-4361 rlthompson@usgs.gov","orcid":"https://orcid.org/0000-0001-6901-4361","contributorId":5707,"corporation":false,"usgs":true,"family":"Thompson","given":"Rachel","email":"rlthompson@usgs.gov","middleInitial":"L.","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":690889,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hershberger, Paul 0000-0002-2261-7760 phershberger@usgs.gov","orcid":"https://orcid.org/0000-0002-2261-7760","contributorId":150816,"corporation":false,"usgs":true,"family":"Hershberger","given":"Paul","email":"phershberger@usgs.gov","affiliations":[{"id":654,"text":"Western Fisheries Research Center","active":true,"usgs":true}],"preferred":true,"id":690885,"contributorType":{"id":1,"text":"Authors"},"rank":5}]}}
,{"id":70186881,"text":"70186881 - 2017 - Cloud detection algorithm comparison and validation for operational Landsat data products","interactions":[],"lastModifiedDate":"2017-04-13T09:40:27","indexId":"70186881","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":3254,"text":"Remote Sensing of Environment","printIssn":"0034-4257","active":true,"publicationSubtype":{"id":10}},"title":"Cloud detection algorithm comparison and validation for operational Landsat data products","docAbstract":"<p><span>Clouds are a pervasive and unavoidable issue in satellite-borne optical imagery. Accurate, well-documented, and automated cloud detection algorithms are necessary to effectively leverage large collections of remotely sensed data. The Landsat project is uniquely suited for comparative validation of cloud assessment algorithms because the modular architecture of the Landsat ground system allows for quick evaluation of new code, and because Landsat has the most comprehensive manual truth masks of any current satellite data archive. Currently, the Landsat Level-1 Product Generation System (LPGS) uses separate algorithms for determining clouds, cirrus clouds, and snow and/or ice probability on a per-pixel basis. With more bands onboard the Landsat 8 Operational Land Imager (OLI)/Thermal Infrared Sensor (TIRS) satellite, and a greater number of cloud masking algorithms, the U.S. Geological Survey (USGS) is replacing the current cloud masking workflow with a more robust algorithm that is capable of working across multiple Landsat sensors with minimal modification. Because of the inherent error from stray light and intermittent data availability of TIRS, these algorithms need to operate both with and without thermal data. In this study, we created a workflow to evaluate cloud and cloud shadow masking algorithms using cloud validation masks manually derived from both Landsat 7 Enhanced Thematic Mapper Plus (ETM&nbsp;+) and Landsat 8 OLI/TIRS data. We created a new validation dataset consisting of 96 Landsat 8 scenes, representing different biomes and proportions of cloud cover. We evaluated algorithm performance by overall accuracy, omission error, and commission error for both cloud and cloud shadow. We found that CFMask, C code based on the Function of Mask (Fmask) algorithm, and its confidence bands have the best overall accuracy among the many algorithms tested using our validation data. The Artificial Thermal-Automated Cloud Cover Algorithm (AT-ACCA) is the most accurate nonthermal-based algorithm. We give preference to CFMask for operational cloud and cloud shadow detection, as it is derived from a priori knowledge of physical phenomena and is operable without geographic restriction, making it useful for current and future land imaging missions without having to be retrained in a machine-learning environment.</span></p>","language":"English","publisher":"Elsevier","doi":"10.1016/j.rse.2017.03.026","usgsCitation":"Foga, S.C., Scaramuzza, P., Guo, S., Zhu, Z., Dilley, R., Beckmann, T., Schmidt, G.L., Dwyer, J.L., Hughes, M., and Laue, B., 2017, Cloud detection algorithm comparison and validation for operational Landsat data products: Remote Sensing of Environment, v. 194, p. 379-390, https://doi.org/10.1016/j.rse.2017.03.026.","productDescription":"12 p.","startPage":"379","endPage":"390","ipdsId":"IP-076780","costCenters":[{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true}],"links":[{"id":469926,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1016/j.rse.2017.03.026","text":"Publisher Index Page"},{"id":339659,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"194","publishingServiceCenter":{"id":4,"text":"Rolla PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58f08e5ee4b06911a29fa842","contributors":{"authors":[{"text":"Foga, Steven Curtis 0000-0003-1835-1987 sfoga@usgs.gov","orcid":"https://orcid.org/0000-0003-1835-1987","contributorId":5703,"corporation":false,"usgs":true,"family":"Foga","given":"Steven","email":"sfoga@usgs.gov","middleInitial":"Curtis","affiliations":[{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true}],"preferred":true,"id":690805,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Scaramuzza, Pat 0000-0002-2616-8456 pscar@usgs.gov","orcid":"https://orcid.org/0000-0002-2616-8456","contributorId":3970,"corporation":false,"usgs":true,"family":"Scaramuzza","given":"Pat","email":"pscar@usgs.gov","affiliations":[{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true}],"preferred":true,"id":690806,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Guo, Song 0000-0001-8823-188X sguo@usgs.gov","orcid":"https://orcid.org/0000-0001-8823-188X","contributorId":5245,"corporation":false,"usgs":true,"family":"Guo","given":"Song","email":"sguo@usgs.gov","affiliations":[{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true}],"preferred":true,"id":690807,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Zhu, Zhe 0000-0001-8283-6407","orcid":"https://orcid.org/0000-0001-8283-6407","contributorId":190828,"corporation":false,"usgs":false,"family":"Zhu","given":"Zhe","affiliations":[],"preferred":false,"id":690808,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Dilley, Ronald 0000-0002-6960-1125 ronald.dilley.ctr@usgs.gov","orcid":"https://orcid.org/0000-0002-6960-1125","contributorId":190829,"corporation":false,"usgs":true,"family":"Dilley","given":"Ronald","email":"ronald.dilley.ctr@usgs.gov","affiliations":[],"preferred":false,"id":690809,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Beckmann, Tim 0000-0002-2557-0638 tim.beckmann.ctr@usgs.gov","orcid":"https://orcid.org/0000-0002-2557-0638","contributorId":190830,"corporation":false,"usgs":true,"family":"Beckmann","given":"Tim","email":"tim.beckmann.ctr@usgs.gov","affiliations":[],"preferred":false,"id":690811,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Schmidt, Gail L. 0000-0002-9684-8158 gschmidt@usgs.gov","orcid":"https://orcid.org/0000-0002-9684-8158","contributorId":3475,"corporation":false,"usgs":true,"family":"Schmidt","given":"Gail","email":"gschmidt@usgs.gov","middleInitial":"L.","affiliations":[{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true}],"preferred":true,"id":690810,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Dwyer, John L. 0000-0002-8281-0896 dwyer@usgs.gov","orcid":"https://orcid.org/0000-0002-8281-0896","contributorId":3481,"corporation":false,"usgs":true,"family":"Dwyer","given":"John","email":"dwyer@usgs.gov","middleInitial":"L.","affiliations":[{"id":223,"text":"Earth Resources Observation and Science (EROS) Center (Geography)","active":false,"usgs":true},{"id":222,"text":"Earth Resources Observation and Science (EROS) Center","active":true,"usgs":true}],"preferred":true,"id":690812,"contributorType":{"id":1,"text":"Authors"},"rank":8},{"text":"Hughes, MJ","contributorId":190831,"corporation":false,"usgs":false,"family":"Hughes","given":"MJ","email":"","affiliations":[],"preferred":false,"id":690813,"contributorType":{"id":1,"text":"Authors"},"rank":9},{"text":"Laue, Brady 0000-0002-4559-3618 brady.laue.ctr@usgs.gov","orcid":"https://orcid.org/0000-0002-4559-3618","contributorId":190832,"corporation":false,"usgs":true,"family":"Laue","given":"Brady","email":"brady.laue.ctr@usgs.gov","affiliations":[],"preferred":false,"id":690814,"contributorType":{"id":1,"text":"Authors"},"rank":10}]}}
,{"id":70186886,"text":"70186886 - 2017 - Integrated species distribution models:  combining presence-background data and site-occupancy data with imperfect detection","interactions":[],"lastModifiedDate":"2017-04-13T11:31:34","indexId":"70186886","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2717,"text":"Methods in Ecology and Evolution","active":true,"publicationSubtype":{"id":10}},"title":"Integrated species distribution models:  combining presence-background data and site-occupancy data with imperfect detection","docAbstract":"<ol id=\"mee312738-list-0001\" class=\"o-list--numbered o-list--paragraph\"><li>Two main sources of data for species distribution models (SDMs) are site-occupancy (SO) data from planned surveys, and presence-background (PB) data from opportunistic surveys and other sources. SO surveys give high quality data about presences and absences of the species in a particular area. However, due to their high cost, they often cover a smaller area relative to PB data, and are usually not representative of the geographic range of a species. In contrast, PB data is plentiful, covers a larger area, but is less reliable due to the lack of information on species absences, and is usually characterised by biased sampling. Here we present a new approach for species distribution modelling that integrates these two data types.</li><li>We have used an inhomogeneous Poisson point process as the basis for constructing an integrated SDM that fits both PB and SO data simultaneously. It is the first implementation of an Integrated SO–PB Model which uses repeated survey occupancy data and also incorporates detection probability.</li><li>The Integrated Model's performance was evaluated, using simulated data and compared to approaches using PB or SO data alone. It was found to be superior, improving the predictions of species spatial distributions, even when SO data is sparse and collected in a limited area. The Integrated Model was also found effective when environmental covariates were significantly correlated. Our method was demonstrated with real SO and PB data for the Yellow-bellied glider (<i>Petaurus australis</i>) in south-eastern Australia, with the predictive performance of the Integrated Model again found to be superior.</li><li>PB models are known to produce biased estimates of species occupancy or abundance. The small sample size of SO datasets often results in poor out-of-sample predictions. Integrated models combine data from these two sources, providing superior predictions of species abundance compared to using either data source alone. Unlike conventional SDMs which have restrictive scale-dependence in their predictions, our Integrated Model is based on a point process model and has no such scale-dependency. It may be used for predictions of abundance at any spatial-scale while still maintaining the underlying relationship between abundance and area.</li></ol>","language":"English","publisher":"Wiley","doi":"10.1111/2041-210X.12738","usgsCitation":"Koshkina, V., Wang, Y., Gordon, A., Dorazio, R., White, M., and Stone, L., 2017, Integrated species distribution models:  combining presence-background data and site-occupancy data with imperfect detection: Methods in Ecology and Evolution, v. 8, p. 420-430, https://doi.org/10.1111/2041-210X.12738.","productDescription":"11 p.","startPage":"420","endPage":"430","ipdsId":"IP-079127","costCenters":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true}],"links":[{"id":469929,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/2041-210x.12738","text":"Publisher Index Page"},{"id":339679,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"8","publishingServiceCenter":{"id":5,"text":"Lafayette PSC"},"noUsgsAuthors":false,"publicationDate":"2017-04-10","publicationStatus":"PW","scienceBaseUri":"58f08e5ee4b06911a29fa840","contributors":{"authors":[{"text":"Koshkina, Vira","contributorId":190838,"corporation":false,"usgs":false,"family":"Koshkina","given":"Vira","email":"","affiliations":[],"preferred":false,"id":690846,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wang, Yang","contributorId":173071,"corporation":false,"usgs":false,"family":"Wang","given":"Yang","email":"","affiliations":[],"preferred":false,"id":690847,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Gordon, Ascelin","contributorId":190839,"corporation":false,"usgs":false,"family":"Gordon","given":"Ascelin","email":"","affiliations":[],"preferred":false,"id":690848,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Dorazio, Robert 0000-0003-2663-0468 bob_dorazio@usgs.gov","orcid":"https://orcid.org/0000-0003-2663-0468","contributorId":172151,"corporation":false,"usgs":true,"family":"Dorazio","given":"Robert","email":"bob_dorazio@usgs.gov","affiliations":[{"id":17705,"text":"Wetland and Aquatic Research Center","active":true,"usgs":true},{"id":5051,"text":"FLWSC-Orlando","active":true,"usgs":true}],"preferred":true,"id":690845,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"White, Matthew","contributorId":169757,"corporation":false,"usgs":false,"family":"White","given":"Matthew","email":"","affiliations":[],"preferred":false,"id":690849,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Stone, Lewi","contributorId":190840,"corporation":false,"usgs":false,"family":"Stone","given":"Lewi","email":"","affiliations":[],"preferred":false,"id":690850,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70186907,"text":"70186907 - 2017 - Benefits of the destinations, not costs of the journeys, shape partial migration patterns","interactions":[],"lastModifiedDate":"2017-06-14T11:48:54","indexId":"70186907","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2158,"text":"Journal of Animal Ecology","active":true,"publicationSubtype":{"id":10}},"title":"Benefits of the destinations, not costs of the journeys, shape partial migration patterns","docAbstract":"<p>1. The reasons that lead some animals to seasonally migrate, and others to remain in the same area year-round, are poorly understood. Associations between traits, such as body size, and migration provide clues. For example, larger species and individuals are more likely to migrate.</p><p>2. One explanation for this size bias in migration is that larger animals are capable of moving faster (movement hypothesis). However, body size is linked to many other biological processes. For instance, the energetic balances of larger animals are generally more sensitive to variation in food density because of body size effects on foraging and metabolism and this sensitivity could drive migratory decisions (forage hypothesis).</p><p>3. Identifying the primary selective forces that drive migration ultimately requires quantifying fitness impacts over the full annual migratory cycle. Here, we develop a full annual migratory cycle model from metabolic and foraging theory to compare the importance of the forage and movement hypotheses. We parameterize the model for Galapagos tortoises, which were recently discovered to be size-dependent altitudinal migrants.</p><p>4. The model predicts phenomena not included in model development including maximum body sizes, the body size at which individuals begin to migrate, and the seasonal timing of migration and these predictions generally agree with available data. Scenarios strongly support the forage hypothesis over the movement hypothesis. Furthermore, male Galapagos tortoises on Santa Cruz Island would be unable to grow to their enormous sizes without access to both highlands and lowlands.</p><p>5. Whereas recent research has focused on links between traits and the migratory phases of the migratory cycle, we find that effects of body size on the non-migratory phases are far more important determinants of the propensity to migrate. Larger animals are more sensitive to changing forage conditions than smaller animals with implications for maintenance of migration and body size in the face of environmental change.</p>","language":"English","publisher":"Wiley","doi":"10.1111/1365-2656.12679","usgsCitation":"Yackulic, C.B., Blake, S., and Bastille-Rousseau, G., 2017, Benefits of the destinations, not costs of the journeys, shape partial migration patterns: Journal of Animal Ecology, v. 86, no. 4, p. 972-982, https://doi.org/10.1111/1365-2656.12679.","productDescription":"11 p.","startPage":"972","endPage":"982","ipdsId":"IP-065801","costCenters":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"links":[{"id":469927,"rank":1,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1111/1365-2656.12679","text":"Publisher Index Page"},{"id":438374,"rank":0,"type":{"id":30,"text":"Data Release"},"url":"https://doi.org/10.5066/F7154F7P","text":"USGS data release","linkHelpText":"Full Annual Cycle Bioenergetics model of migration applied to Galapagos tortoisesData"},{"id":339709,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"86","issue":"4","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationDate":"2017-05-15","publicationStatus":"PW","scienceBaseUri":"58f08e5ce4b06911a29fa836","contributors":{"authors":[{"text":"Yackulic, Charles B. 0000-0001-9661-0724 cyackulic@usgs.gov","orcid":"https://orcid.org/0000-0001-9661-0724","contributorId":4662,"corporation":false,"usgs":true,"family":"Yackulic","given":"Charles","email":"cyackulic@usgs.gov","middleInitial":"B.","affiliations":[{"id":568,"text":"Southwest Biological Science Center","active":true,"usgs":true}],"preferred":true,"id":690957,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Blake, Stephen","contributorId":65339,"corporation":false,"usgs":false,"family":"Blake","given":"Stephen","email":"","affiliations":[{"id":12472,"text":"Max Planck Institute for Ornithology","active":true,"usgs":false},{"id":30787,"text":"Saint Louis University","active":true,"usgs":false}],"preferred":false,"id":690958,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bastille-Rousseau, Guillaume 0000-0001-6799-639X","orcid":"https://orcid.org/0000-0001-6799-639X","contributorId":190877,"corporation":false,"usgs":false,"family":"Bastille-Rousseau","given":"Guillaume","email":"","affiliations":[{"id":40724,"text":"Cooperative Wildlife Research Laboratory and Department of Forestry, Southern Illinois University, 251 Life Science II, Mail Code 6504, Carbondale, Illinois 62901 USA","active":true,"usgs":false}],"preferred":false,"id":690959,"contributorType":{"id":1,"text":"Authors"},"rank":3}]}}
,{"id":70186894,"text":"70186894 - 2017 - Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus","interactions":[],"lastModifiedDate":"2018-08-16T21:28:28","indexId":"70186894","displayToPublicDate":"2017-04-13T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2497,"text":"Journal of Virology","active":true,"publicationSubtype":{"id":10}},"title":"Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus","docAbstract":"<p><span>Introductions of low-pathogenic avian influenza (LPAI) viruses of subtypes H5 and H7 into poultry from wild birds have the potential to mutate to highly pathogenic avian influenza (HPAI) viruses, but such viruses' origins are often unclear. In January 2016, a novel H7N8 HPAI virus caused an outbreak in turkeys in Indiana, USA. To determine the virus's origin, we sequenced the genomes of 441 wild-bird origin influenza A viruses (IAVs) from North America and subjected them to evolutionary analyses. The results showed that the H7N8 LPAI virus most likely circulated among diving ducks in the Mississippi flyway during autumn 2015 and was subsequently introduced to Indiana turkeys, in which it evolved high pathogenicity. Preceding the outbreak, an isolate with six gene segments (PB2, PB1, PA, HA, NA, and NS) sharing &gt;99% sequence identity with those of H7N8 turkey isolates was recovered from a diving duck sampled in Kentucky, USA. H4N8 IAVs from other diving ducks possessed five H7N8-like gene segments (PB2, PB1, NA, MP, and NS; &gt;98% sequence identity). Our findings suggest that viral gene constellations circulating among diving ducks can contribute to the emergence of IAVs that affect poultry. Therefore, diving ducks may serve an important and understudied role in the maintenance, diversification, and transmission of IAVs in the wild-bird reservoir.</span></p>","language":"English","publisher":"American Society for Microbiology","doi":"10.1128/JVI.02208-16","usgsCitation":"Xu, Y., Ramey, A.M., Bowman, A.S., DeLiberto, T.J., Killian, M.L., Krauss, S., Nolting, J.M., Torchetti, M.K., Reeves, A.B., Webby, R.J., Stallknecht, D.E., and Wan, X., 2017, Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus: Journal of Virology, v. 91, no. 9, e02208-16, https://doi.org/10.1128/JVI.02208-16.","productDescription":"e02208-16","ipdsId":"IP-080329","costCenters":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true}],"links":[{"id":469924,"rank":0,"type":{"id":41,"text":"Open Access External Repository Page"},"url":"https://doi.org/10.1128/jvi.02208-16","text":"External Repository"},{"id":339685,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"91","issue":"9","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58f08e5de4b06911a29fa838","contributors":{"authors":[{"text":"Xu, Yifei","contributorId":190852,"corporation":false,"usgs":false,"family":"Xu","given":"Yifei","email":"","affiliations":[],"preferred":false,"id":690892,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Ramey, Andrew M. 0000-0002-3601-8400 aramey@usgs.gov","orcid":"https://orcid.org/0000-0002-3601-8400","contributorId":1872,"corporation":false,"usgs":true,"family":"Ramey","given":"Andrew","email":"aramey@usgs.gov","middleInitial":"M.","affiliations":[{"id":117,"text":"Alaska Science Center Biology WTEB","active":true,"usgs":true},{"id":114,"text":"Alaska Science Center","active":true,"usgs":true}],"preferred":true,"id":690890,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Bowman, Andrew S.","contributorId":190853,"corporation":false,"usgs":false,"family":"Bowman","given":"Andrew","email":"","middleInitial":"S.","affiliations":[],"preferred":false,"id":690893,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"DeLiberto, Thomas J.","contributorId":145606,"corporation":false,"usgs":false,"family":"DeLiberto","given":"Thomas","email":"","middleInitial":"J.","affiliations":[{"id":16167,"text":"7United States Department of Agriculture, Animal and Plant Health Inspection Service, Wildlife Services, National Wildlife Disease Program, 4101 LaPorte Ave., Fort Collins, CO, United States of America.","active":true,"usgs":false}],"preferred":false,"id":690894,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Killian, Mary L.","contributorId":29685,"corporation":false,"usgs":false,"family":"Killian","given":"Mary","email":"","middleInitial":"L.","affiliations":[{"id":6622,"text":"US Department of Agriculture","active":true,"usgs":false}],"preferred":false,"id":690895,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Krauss, Scott","contributorId":190854,"corporation":false,"usgs":false,"family":"Krauss","given":"Scott","email":"","affiliations":[],"preferred":false,"id":690896,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Nolting, Jacqueline M.","contributorId":190855,"corporation":false,"usgs":false,"family":"Nolting","given":"Jacqueline","email":"","middleInitial":"M.","affiliations":[],"preferred":false,"id":690897,"contributorType":{"id":1,"text":"Authors"},"rank":7},{"text":"Torchetti, Mia 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J.","contributorId":190857,"corporation":false,"usgs":false,"family":"Webby","given":"Richard","email":"","middleInitial":"J.","affiliations":[],"preferred":false,"id":690899,"contributorType":{"id":1,"text":"Authors"},"rank":10},{"text":"Stallknecht, David E.","contributorId":14323,"corporation":false,"usgs":false,"family":"Stallknecht","given":"David","email":"","middleInitial":"E.","affiliations":[{"id":7125,"text":"Southeastern Cooperative Wildlife Disease Study, College of Veterinary Medicine, University of Georgia, Athens, GA 30602, USA.","active":true,"usgs":false}],"preferred":false,"id":690900,"contributorType":{"id":1,"text":"Authors"},"rank":11},{"text":"Wan, Xiu-Feng","contributorId":173959,"corporation":false,"usgs":false,"family":"Wan","given":"Xiu-Feng","email":"","affiliations":[{"id":17848,"text":"Mississippi State University","active":true,"usgs":false}],"preferred":false,"id":690901,"contributorType":{"id":1,"text":"Authors"},"rank":12}]}}
,{"id":70186880,"text":"70186880 - 2017 - Quantifying the demographic cost of human-related mortality to a raptor population","interactions":[],"lastModifiedDate":"2017-11-22T16:58:07","indexId":"70186880","displayToPublicDate":"2017-04-12T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2980,"text":"PLoS ONE","active":true,"publicationSubtype":{"id":10}},"title":"Quantifying the demographic cost of human-related mortality to a raptor population","docAbstract":"<p>Raptors are exposed to a wide variety of human-related mortality agents, and yet population-level effects are rarely quantified. Doing so requires modeling vital rates in the context of species life-history, behavior, and population dynamics theory. In this paper, we explore the details of such an analysis by focusing on the demography of a resident, tree-nesting population of golden eagles (<i>Aquila chrysaetos</i>) in the vicinity of an extensive (142 km<sup>2</sup>) windfarm in California. During 1994–2000, we tracked the fates of &gt;250 radio-marked individuals of four life-stages and conducted five annual surveys of territory occupancy and reproduction. Collisions with wind turbines accounted for 41% of 88 uncensored fatalities, most of which were subadults and nonbreeding adults (floaters). A consistent overall male preponderance in the population meant that females were the limiting sex in this territorial, monogamous species. Estimates of potential population growth rate and associated variance indicated a stable breeding population, but one for which any further decrease in vital rates would require immigrant floaters to fill territory vacancies. Occupancy surveys 5 and 13 years later (2005 and 2013) showed that the nesting population remained intact, and no upward trend was apparent in the proportion of subadult eagles as pair members, a condition that would have suggested a deficit of adult replacements. However, the number of golden eagle pairs required to support windfarm mortality was large. We estimated that the entire annual reproductive output of 216–255 breeding pairs would have been necessary to support published estimates of 55–65 turbine blade-strike fatalities per year. Although the vital rates forming the basis for these calculations may have changed since the data were collected, our approach should be useful for gaining a clearer understanding of how anthropogenic mortality affects the health of raptor populations, particularly those species with delayed maturity and naturally low reproductive rates.</p>","language":"English","publisher":"PLoS","doi":"10.1371/journal.pone.0172232","usgsCitation":"Hunt, W.G., Wiens, D., Law, P.R., Fuller, M.R., Hunt, T.L., Driscoll, D.E., and Jackman, R.E., 2017, Quantifying the demographic cost of human-related mortality to a raptor population: PLoS ONE, v. 12, no. 2, e0172232; 22 p., https://doi.org/10.1371/journal.pone.0172232.","productDescription":"e0172232; 22 p.","ipdsId":"IP-077853","costCenters":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"links":[{"id":469932,"rank":0,"type":{"id":40,"text":"Open Access Publisher Index Page"},"url":"https://doi.org/10.1371/journal.pone.0172232","text":"Publisher Index Page"},{"id":339649,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"12","issue":"2","publishingServiceCenter":{"id":12,"text":"Tacoma PSC"},"noUsgsAuthors":false,"publicationDate":"2017-02-24","publicationStatus":"PW","scienceBaseUri":"58ef3da4e4b0eed1ab8e3bc2","contributors":{"authors":[{"text":"Hunt, W. Grainger","contributorId":139544,"corporation":false,"usgs":false,"family":"Hunt","given":"W.","email":"","middleInitial":"Grainger","affiliations":[{"id":12795,"text":"The Peregrine Fund, Inc.","active":true,"usgs":false}],"preferred":false,"id":690799,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Wiens, David 0000-0002-2020-038X jwiens@usgs.gov","orcid":"https://orcid.org/0000-0002-2020-038X","contributorId":167538,"corporation":false,"usgs":true,"family":"Wiens","given":"David","email":"jwiens@usgs.gov","affiliations":[{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true},{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true}],"preferred":true,"id":690800,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Law, Peter R.","contributorId":190824,"corporation":false,"usgs":false,"family":"Law","given":"Peter","email":"","middleInitial":"R.","affiliations":[],"preferred":false,"id":690801,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Fuller, Mark R. 0000-0001-7459-1729 mark_fuller@usgs.gov","orcid":"https://orcid.org/0000-0001-7459-1729","contributorId":2296,"corporation":false,"usgs":true,"family":"Fuller","given":"Mark","email":"mark_fuller@usgs.gov","middleInitial":"R.","affiliations":[{"id":290,"text":"Forest and Rangeland Ecosystem Science Center","active":false,"usgs":true},{"id":289,"text":"Forest and Rangeland Ecosys Science Center","active":true,"usgs":true}],"preferred":true,"id":690798,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Hunt, Teresa L.","contributorId":190825,"corporation":false,"usgs":false,"family":"Hunt","given":"Teresa","email":"","middleInitial":"L.","affiliations":[],"preferred":false,"id":690802,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Driscoll, Daniel E.","contributorId":190826,"corporation":false,"usgs":false,"family":"Driscoll","given":"Daniel","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":690803,"contributorType":{"id":1,"text":"Authors"},"rank":6},{"text":"Jackman, Ronald E.","contributorId":190827,"corporation":false,"usgs":false,"family":"Jackman","given":"Ronald","email":"","middleInitial":"E.","affiliations":[],"preferred":false,"id":690804,"contributorType":{"id":1,"text":"Authors"},"rank":7}]}}
,{"id":70186877,"text":"70186877 - 2017 - Environmental <i>Escherichia coli</i>: Ecology and public health implications - A review","interactions":[],"lastModifiedDate":"2017-08-16T17:39:32","indexId":"70186877","displayToPublicDate":"2017-04-12T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":2,"text":"Article"},"publicationSubtype":{"id":10,"text":"Journal Article"},"seriesTitle":{"id":2169,"text":"Journal of Applied Microbiology","active":true,"publicationSubtype":{"id":10}},"title":"Environmental <i>Escherichia coli</i>: Ecology and public health implications - A review","docAbstract":"<p><i>Escherichia coli</i> is classified as a rod-shaped, Gram-negative bacterium in the family <i>Enterobacteriaceae</i>. The bacterium mainly inhabits the lower intestinal tract of warm-blooded animals, including humans, and is often discharged into the environment through feces or wastewater effluent. The presence of <i>E. coli</i> in environmental waters has long been considered as an indicator of recent fecal pollution. However, numerous recent studies have reported that some specific strains of <i>E. coli</i> can survive for long periods of time, and potentially reproduce, in extra-intestinal environments. This indicates that <i>E. coli</i> can be integrated into indigenous microbial communities in the environment. This naturalization phenomenon calls into question the reliability of <i>E. coli</i> as a fecal indicator bacterium (FIB). Recently, many studies reported that <i>E. coli</i> populations in the environment are affected by ambient environmental conditions affecting their long-term survival. Large-scale studies of population genetics provide the diversity and complexity of <i>E. coli</i> strains in various environments, affected by multiple environmental factors. This review examines the current knowledge on the ecology of <i>E. coli</i> strains in various environments in regards to its role as a FIB and as a naturalized member of indigenous microbial communities. Special emphasis is given on the growth of pathogenic <i>E. coli</i> in the environment, and the population genetics of environmental members of the genus <i>Escherichia</i>. The impact of environmental <i>E. coli</i> on water quality and public health is also discussed.</p>","language":"English","publisher":"Wiley","doi":"10.1111/jam.13468","usgsCitation":"Jang, J., Hur, H., Sadowsky, M.J., Byappanahalli, M., Yan, T., and Ishii, S., 2017, Environmental <i>Escherichia coli</i>: Ecology and public health implications - A review: Journal of Applied Microbiology, v. 123, no. 3, p. 570-581, https://doi.org/10.1111/jam.13468.","productDescription":"12 p.","startPage":"570","endPage":"581","ipdsId":"IP-081530","costCenters":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"links":[{"id":339640,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"volume":"123","issue":"3","publishingServiceCenter":{"id":6,"text":"Columbus PSC"},"noUsgsAuthors":false,"publicationDate":"2017-07-03","publicationStatus":"PW","scienceBaseUri":"58ef3da6e4b0eed1ab8e3bc4","contributors":{"authors":[{"text":"Jang, Jeonghwan","contributorId":190816,"corporation":false,"usgs":false,"family":"Jang","given":"Jeonghwan","email":"","affiliations":[],"preferred":false,"id":690773,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Hur, Hor-Gil","contributorId":190817,"corporation":false,"usgs":false,"family":"Hur","given":"Hor-Gil","email":"","affiliations":[],"preferred":false,"id":690774,"contributorType":{"id":1,"text":"Authors"},"rank":2},{"text":"Sadowsky, Michael J.","contributorId":34003,"corporation":false,"usgs":false,"family":"Sadowsky","given":"Michael","email":"","middleInitial":"J.","affiliations":[{"id":12644,"text":"University of Minnesota, St. Paul","active":true,"usgs":false}],"preferred":false,"id":690775,"contributorType":{"id":1,"text":"Authors"},"rank":3},{"text":"Byappanahalli, Muruleedhara 0000-0001-5376-597X byappan@usgs.gov","orcid":"https://orcid.org/0000-0001-5376-597X","contributorId":147923,"corporation":false,"usgs":true,"family":"Byappanahalli","given":"Muruleedhara","email":"byappan@usgs.gov","affiliations":[{"id":324,"text":"Great Lakes Science Center","active":true,"usgs":true}],"preferred":true,"id":690772,"contributorType":{"id":1,"text":"Authors"},"rank":4},{"text":"Yan, Tao","contributorId":190818,"corporation":false,"usgs":false,"family":"Yan","given":"Tao","email":"","affiliations":[],"preferred":false,"id":690776,"contributorType":{"id":1,"text":"Authors"},"rank":5},{"text":"Ishii, Satoshi","contributorId":190819,"corporation":false,"usgs":false,"family":"Ishii","given":"Satoshi","email":"","affiliations":[],"preferred":false,"id":690777,"contributorType":{"id":1,"text":"Authors"},"rank":6}]}}
,{"id":70185351,"text":"70185351 - 2017 - Facilitating adaptation in montane plants to changing precipitation along an elevation gradient","interactions":[],"lastModifiedDate":"2018-01-04T12:32:26","indexId":"70185351","displayToPublicDate":"2017-04-12T00:00:00","publicationYear":"2017","noYear":false,"publicationType":{"id":18,"text":"Report"},"publicationSubtype":{"id":4,"text":"Other Government Series"},"seriesTitle":{"id":295,"text":"Technical Report","active":false,"publicationSubtype":{"id":4}},"seriesNumber":"HCSU-080","title":"Facilitating adaptation in montane plants to changing precipitation along an elevation gradient","docAbstract":"Montane plant communities throughout the world have responded to changes in precipitation and temperature regimes by shifting ranges upward in elevation. Continued warmer, drier climate conditions have been documented and are projected to increase in high-elevation areas in Hawai‘i, consistent with climate change effects reported in other environments throughout the world. Organisms that cannot disperse or adapt biologically to projected climate scenarios in situ may decrease in distributional range and abundance over time. Restoration efforts will need\r\nto accommodate future climate change and account for the interactive effects of existing invasive species to ensure long-term persistence. As part of a larger, ongoing restoration effort, we hypothesized that plants from a lower-elevation forest ecotype would have higher rates of survival and growth compared to high-elevation forest conspecifics when grown in common plots along an elevation gradient. We monitored climate conditions at planting sites to identify whether temperature or rainfall influenced survival and growth after 20 weeks. We found that origin significantly affected survival in only one of three native montane species, Dodonaea viscosa. Contrary to our hypothesis, 75.2% of seedlings from high-elevation origin survived in comparison to 58.7% of seedlings from low elevation across the entire elevation gradient. Origin also influenced survival in linearized mixed models that controlled for temperature, precipitation, and elevation in D. viscosa and Chenopodium oahuense. Only C. oahuense seedlings had similar predictors of growth and survival. There were no common patterns of growth or survival between species, indicating that responses to changing precipitation and  emperature regimes varied between montane plant species. Results also suggest that locally sourced seed is important to ensure highest survival at restoration sites. Further experimentation on larger spatial and temporal scales is necessary to determine the empirical responses of species and communities to changing climate in the full context of highly degraded Hawaiian ecosystems.","language":"English","publisher":"University of Hawaii Hilo","publisherLocation":"Hilo, HI","usgsCitation":"Hess, S.C., and Leopold, C., 2017, Facilitating adaptation in montane plants to changing precipitation along an elevation gradient: Technical Report HCSU-080, iv, 33 p.","productDescription":"iv, 33 p.","ipdsId":"IP-080120","costCenters":[{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true}],"links":[{"id":339621,"type":{"id":24,"text":"Thumbnail"},"url":"https://pubs.usgs.gov/thumbnails/outside_thumb.jpg"}],"country":"United States","state":"Hawai'i","geographicExtents":"{\n  \"type\": \"FeatureCollection\",\n  \"features\": [\n    {\n      \"type\": \"Feature\",\n      \"properties\": {},\n      \"geometry\": {\n        \"type\": \"Polygon\",\n        \"coordinates\": [\n          [\n            [\n              -155.65155029296875,\n              19.846810534206607\n            ],\n            [\n              -155.65429687499997,\n              19.777042202225964\n            ],\n            [\n              -155.60211181640625,\n              19.735683578629445\n            ],\n            [\n              -155.56365966796875,\n              19.730512997022263\n            ],\n            [\n              -155.5389404296875,\n              19.70724330927441\n            ],\n            [\n              -155.48675537109375,\n              19.694314241825747\n            ],\n            [\n              -155.43182373046875,\n              19.70724330927441\n            ],\n            [\n              -155.37139892578125,\n              19.746024239625427\n            ],\n            [\n              -155.32745361328125,\n              19.81063818250419\n            ],\n            [\n              -155.33294677734375,\n              19.872642883577086\n            ],\n            [\n              -155.36041259765625,\n              19.92945922975802\n            ],\n            [\n              -155.40435791015622,\n              19.944951054874966\n            ],\n            [\n              -155.47576904296875,\n              19.944951054874966\n            ],\n            [\n              -155.54718017578125,\n              19.924294950473808\n            ],\n            [\n              -155.6048583984375,\n              19.882974645034466\n            ],\n            [\n              -155.65155029296875,\n              19.846810534206607\n            ]\n          ]\n        ]\n      }\n    }\n  ]\n}","publishingServiceCenter":{"id":14,"text":"Menlo Park PSC"},"noUsgsAuthors":false,"publicationStatus":"PW","scienceBaseUri":"58ef3daae4b0eed1ab8e3bd8","contributors":{"authors":[{"text":"Hess, Steve C. 0000-0001-6403-9922 shess@usgs.gov","orcid":"https://orcid.org/0000-0001-6403-9922","contributorId":150366,"corporation":false,"usgs":true,"family":"Hess","given":"Steve","email":"shess@usgs.gov","middleInitial":"C.","affiliations":[{"id":521,"text":"Pacific Island Ecosystems Research Center","active":false,"usgs":true},{"id":5049,"text":"Pacific Islands Ecosys Research Center","active":true,"usgs":true}],"preferred":true,"id":685278,"contributorType":{"id":1,"text":"Authors"},"rank":1},{"text":"Leopold, Christina 0000-0003-0499-3196","orcid":"https://orcid.org/0000-0003-0499-3196","contributorId":178961,"corporation":false,"usgs":false,"family":"Leopold","given":"Christina","affiliations":[],"preferred":false,"id":685279,"contributorType":{"id":1,"text":"Authors"},"rank":2}]}}
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