References Cited


Ashford, J., La Mesa, M., Fach, B.A, Jones, C., and Everson, I., 2010, Testing early life connectivity using otolith chemistry and particle-tracking simulations: Canadian Journal of Fisheries and Aquatic Science, v. 67, p. 1303–1315.


Beletsky, D., Mason, D.M., Schwab, D.J., Rutherford, E.S., Janssen, J., Clapp, D.F., and Dettmers, J.M., 2007, Biophysical model of larval yellow perch advection and settlement in Lake Michigan: Journal of Great Lakes Research, v. 33, p. 842–866.


Best, D.J., and Fisher, N.I., 1979, Efficient simulation of the von Mises distribution: Applied Statistics, v. 28, p. 152–157.


Blaxter, J.H.S., and Hunter, J.R., 1982, The biology of clupeoid fishes: Advances in Marine Biology, v. 20, p. 1–223.


Box, G.E.P., and Muller, M.E., 1958, A note on the generation of random normal deviates: Annals of Mathematical Statistics, v. 29, p. 610–611.


Bradbury, I.R., Gardiner, K., Snelgrove, P.V.R., Campana, S.E., Bentzen, P., and Guan, L., 2006, Larval transport, vertical distribution, and localized recruitment in anadromous rainbow smelt (Osmerus mordax): Canadian Journal of Fisheries and Aquatic Sciences, v. 63, p. 2822–2836.


Brickman, D., Adlandsvik, B., Thygesen, U., Parada, C., Rose, K., Hermann, A., and Edwards, K., 2008, Particle tracking, in North, E.W., Gallego, A., and Petitgas, P., eds., Manual of recommended practices for modeling physical-biological interactions during fish early life: International Council for Exploration of the Sea Cooperative Research Report no. 295, p. 14–31.


Burdick, S.M., and Brown, D.T., 2010, Distribution and condition of larval and juvenile Lost River and shortnose suckers in the Williamson River Delta restoration project and Upper Klamath Lake, Oregon—2009 annual data summary: U.S. Geological Survey Open File Report 2010-1216, 78 p., http://pubs.usgs.gov/of/2010/1216/.

Casulli, Vincenzo, and Zanolli, P., 2002, Semi-implicit numerical modeling of nonhydrostatic free-surface flows for environmental problems: Mathematical and Computer Modelling, v. 36, p. 1131–1149.


Champalbert, G., and Marchand, J., 1994, Rheotaxis in larvae and juvenile sole (Solea solea L.)—Influence of light conditions and sediment: Journal of Experimental Marine Biology and Ecology, v. 177, p. 235–249.


Cooperman, M.S., and Markle, D.F., 2003, Rapid outmigration of Lost River and shortnose sucker larvae from in-river spawning beds to in-lake rearing grounds: Transactions of the American Fisheries Society, v. 132, p. 1138–1153.


Cooperman, M.S., and Markle, D.F., 2004, Abundance, size, and feeding success of larval shortnose and Lost River suckers from different habitats of the littoral zone of Upper Klamath Lake: Environmental Biology of Fishes, v. 71, no. 4, p. 365–377.


Cooperman, M.S., Markle, D.F., Terwilliger, Mark, and Simon, D.C., 2010, A production estimate approach to analyze habitat and weather effects on recruitment of two endangered freshwater fish: Canadian Journal of Fisheries and Aquatic Sciences, v. 67, p. 28–41.


Crandall, J.D., Bach, L.B., Rudd, Nathan, Stern, Mark, and Barry, Matt, 2008, Response of larval Lost River and shortnose suckers to wetland restoration at the Williamson River Delta, Oregon: Transactions of the American Fisheries Society, v. 137, p. 402–416.


Ellsworth, C.M., and Martin, B.A., 2012, Patterns of larval sucker emigration from the Sprague and lower Williamson Rivers of the Upper Klamath Basin, Oregon, after the removal of Chiloquin Dam—2009–10 annual report: U.S. Geological Survey Open-File Report 2012–1037, 34 p., http://pubs.usgs.gov/of/2012/1037/.


Ellsworth, C.M., Tyler, T.J., VanderKooi, S.P., and Markle, D.F., 2009, Patterns of larval sucker emigration from the Sprague and lower Williamson Rivers of the Upper Klamath Basin, Oregon, prior to the removal of Chiloquin Dam—2006 annual report: U.S. Geological Survey Open‑File Report 2009-1027, 32 p., http://pubs.usgs.gov/of/2009/1027/.)


Erdman, C.S., and Hendrixson, H.A., 2010, Larval Lost River and shortnose sucker response to large scale wetland restoration at the Williamson River Delta preserve—2009 annual data summary: Klamath Falls, Oreg., The Nature Conservancy, 38 p.


Hare, J.A., Churchill, J.H., Cowen, R.K., Berger, T., Cornillon, P., Dragos, P., Glenn, S., Govoni, J.J., and Lee, T.N., 2002, Routes and rates of larvae fish transport from the southwestern to the mid-Atlantic North American continental shelf: Limnology and Oceanography, v. 47, p. 1774–1789.


Helbig, J.A., and Pepin P., 1998, Partitioning the influence of physical processes on the estimation of ichthyoplankton mortality rates, I—Theory: Canadian Journal of Fisheries and Aquatic Sciences, v. 55, p. 2189–2205.


Hinckley, S., Megrey, B.A., and Miller, Thomas, 2009, Application 3—Recruitment prediction, in North, E.W., Gallego, Alejandro, and Petitgas, Pierre, eds., Manual of recommended practices for modelling physical-biological interactions during fish early life: International Council for Exploration of the Sea Cooperative Research Report no. 295, p. 106–113.


Hoff, G.R., Logan, D.J., and Markle, D.F., 1997, Otolith morphology and increment validation in young Lost River and shortnose suckers (Ostariophysi: Catostomidae): Transactions of the American Fisheries Society, v. 126, no. 3, p. 488–494.


Houde, E.D., and Bartsch, J., 2009, Mortality, in North, E.W., Gallego, Alejandro, and Petitgas, Pierre, eds., Manual of recommended practices for modelling physical-biological interactions during fish early life: International Council for Exploration of the Sea Cooperative Research Report no. 295, p. 27–42.


Houde, E.D., and Zastrow, C.E., 1993, Ecosystem- and taxon-specific dynamic energetics properties of fish larvae assemblages: Bulletin of Marine Science, v. 53, no. 2, p. 290–335.


Irisson, Jean-Olivier, Leis, J.M., Paris, C.B., and Browman, H.I., 2009, Biological processes—Behavior and settlement, in North, E.W., Gallego, Alejandro, and Petitgas, Pierre, eds., Manual of recommended practices for modelling physical-biological interactions during fish early life: International Council for Exploration of the Sea Cooperative Research Report No. 295. p. 42–59.

Janney, E.C., Shively, R.S., Hayes, B.S., Barry, P.M., and Perkins, D., 2008, Demographic analysis of Lost River sucker and shortnose sucker populations in Upper Klamath Lake, Oregon: Transactions of the American Fisheries Society, v. 137, p. 1812–1825.


LaBolle, L.D., Jr., Li, H.W., and Mundy, B.C., 1985, Comparison of two samplers for quantitatively collecting larval fishes in upper littoral habitats: Journal of Fisheries Biology, v. 26, p. 139–146.


Leis, J.M., 2007, Behaviour as input for modelling dispersal of fish larvae—Behaviour, biogeography, hydrodynamics, ontogeny, physiology and phylogeny meet hydrography: Marine Ecology Progress Series, v. 347, p. 185–193.


Leis, J.M., and Carson-Ewart, B.M., 2003, Orientation of pelagic larvae of coral-reef fishes in the ocean: Marine Ecology Progress Series, v. 252, p. 239–253.


Leis, J.M., Hay, A.C., and Trnski, T., 2006, In situ ontogeny of behavior in pelagic larvae of three temperate, marine, demersal fishes: Marine Biology, v. 148, p. 655–669.


Mariani, Patrizio, MacKenzie, B.R., Iudicone, D., and Bozec, A., 2010, Modelling retention and dispersion mechanisms of bluefin tuna eggs and larvae in the northwest Mediterranean Sea: Progress in Oceanography, v. 86, p. 45–58.


Markle, D.F., and Clauson, Kale, 2006, Ontogenetic and habitat-related changes in diet of late larval and juvenile suckers (Catostomidae) in Upper Klamath Lake, Oregon: Western North American Naturalist, v. 66, no. 4, p. 492–501.


Markle, D.F., and Dunsmoor, L.K., 2007, Effects of habitat volume and fathead minnow introduction on larval survival of two endangered sucker species in Upper Klamath Lake, Oregon: Transactions of the American Fisheries Society, v. 136, p. 567–579.


Markle, D.F., Reithel, S.A., Crandall, J., Wood, T., Tyler, T.J., Terwilliger, M., and Simon, D.C., 2009, Larval fish transport and retention and the importance of location for juvenile fish recruitment in Upper Klamath Lake, Oregon: Transactions of the American Fisheries Society, v. 138, p. 328–347.


Millar, R.B., and Fryer, R.J., 1999, Estimating the size selection curves of towed gears, traps, nets and hooks: Reviews in Fish Biology and Fisheries, v. 9, no. 1, p. 89–116. 


Nahas, E.L., Jackson, G., Pattiaratchi, C.B., and Ivey, G.N., 2003, Hydrodynamic modeling of snapper Pagrus auratus egg and larval dispersal in Shark Bay, Western Australia—Reproductive isolation at a fine spatial scale: Marine Ecology Progress Series, v. 265, p. 213–226.


Overton, A.S., and Rulifson, R.A., 2007, Evaluation of plankton surface pushnets and oblique tows for comparing the catch of diadromous larval fish: Amsterdam, Fisheries Research, v. 86, p. 99–104.


Paris, C.B., Irisson, J.O., Lacroix, G., Fiksen, O., Leis, J.M., and Mullon, C., 2009, Application 2—Connectivity, in North, E.W., Gallego, Alejandro, and Petitgas, Pierre, eds., Manual of recommended practices for modelling physical-biological interactions during fish early life: International Council for Exploration of the Sea Cooperative Research Report No. 295, p. 91–105.


Pepin, Pierre, Werner, Cisco, and van der Molen, Johan, 2009, Application 1—Adaptive sampling, in North, E.W., Gallego, Alejandro, and Petitgas, Pierre, eds., Manual of recommended practices for modelling physical-biological interactions during fish early life: International Council for Exploration of the Sea Cooperative Research Report No. 295, p. 87–90.


Reiser, D.W., Loftus, M., Chapin, D., Jeanes, E., and Oliver, K., 2001, Effects of water quality and lake level on the biology and habitat of selected fish species in Upper Klamath Lake—Report to the Bureau of Indian Affairs, Portland, Oreg.: Redmond, Wash., R2 Resource Consultants, Inc. [variously paged].


Reyns, N.B., Eggleston, D.B., and Luettich, R.A., Jr., 2006, Secondary dispersal of early juvenile blue crabs within a wind-driven estuary: Limnology and Oceanography, v. 51, no. 5, p. 1982–1995.


Ruetz, C.R., and Jennings, C.A., 2000, Swimming performance of larval robust redhorse Moxostoma robustum and low-velocity habitat modeling in the Oconee River, Georgia: Transactions of the American Fisheries Society, v. 129, p. 398–407.


Scoppettone, G.G., and Vinyard, G., 1991, Life history and management of four endangered lacustrine suckers, in Minckley, W.L., and Deacon, J.E., eds., Battle against extinction—Active fish management in the American West: Tucson, Ariz., University of Arizona Press, p. 359–377.


Simon, D.C., Terwilliger, M.R., and Markle, D.F., 2009, Larval and juvenile ecology of Upper Klamath Lake suckers—2004–2008, Final report for contract 1434-03HWRU1584 submitted to U.S. Bureau of Reclamation, Klamath Falls, Oreg.: Corvallis, Oregon State University, Department of Fisheries and Wildlife, 174 p. 


Terwilliger, M.R., Markle, D.F., and Kann, J., 2003, Associations between water quality and daily growth of juvenile shortnose and Lost River suckers in Upper Klamath Lake, Oregon: Transactions of the American Fisheries Society, v. 132, p. 691–708.


Terwilliger. M.R., Reece, T., and Markle, D.F., 2010, Historic and recent age structure and growth of endangered Lost River and shortnose suckers in Upper Klamath Lake, Oregon: Environmental Biology of Fishes, v. 89, p. 239–252.


Trnski, T., 2002, Behavior of settlement-stage larvae of fishes with an estuarine juvenile phase—In situ observations in a warm-temperate estuary: Marine Ecology Progress Series 242, p. 205–214. 


Voss, R., and Hinrichsen, H.-H., 2003. Sources of uncertainty in ichthyoplankton surveys—Modeling the influence of wind forcing and survey strategy on abundance estimates: Journal of Marine Systems, v. 43, p. 87–103.


Watson, J.R., Mitarai, S., Siegel, D.A., Caselle, J.E., Dong, C., and McWilliams, J.C., 2010, Realized and potential larval connectivity in the Southern California Bight: Marine Ecology Progress Series, v. 401, p. 31–48.


Wesp, H.M., and Gibb, A.C., 2003, Do endangered razorback suckers have poor larval escape performance relative to introduced rainbow trout?: Transactions of the American Fisheries Society. v. 132, p. 1166–1178.


Wood, T.M., 2012, Dependence of flow and transport through the Williamson River Delta, Upper Klamath Lake, Oregon, on wind, river inflow, and lake elevation: U.S. Geological Survey Scientific Investigations Report 2012-5004, 32 p., http://pubs.usgs.gov/sir/2012/5004/.


Wood, T.M., Cheng, R.T., Gartner, J.W., Hoilman, G.R., Lindenberg, M.K., and Wellman, R.E., 2008, Modeling hydrodynamics and heat transport in Upper Klamath Lake, Oregon, and implications for water quality: U.S. Geological Survey Scientific Investigations Report 2008-5076, 48 p., http://pubs.usgs.gov/sir/2008/5076/.


Wood, T.M., Hendrixson, H.A., Markle, D.F., Erdman, C.S., Burdick, S.M., Ellsworth, C.M., and Buccola, N.L., 2012, Dispersal of larval suckers at the Williamson River Delta, Upper Klamath Lake, Oregon, 2006–09: U.S. Geological Survey Scientific Investigations Report 2012-5016, 28 p., http://pubs.usgs.gov/sir/2012/5016/.


First posted January 31, 2014