Browse the USGS Publication Warehouse
Publications for publication type Article and publication subtype Journal Article
- Deep-ocean macrofaunal assemblages on ferromanganese and phosphorite-rich substrates in the Southern California Borderland, 2024, PeerJ (12) -
- Bayesian multistate models for measuring invasive carp movement and evaluating telemetry array performance, 2024, PeerJ (12) -
- Mammalian lures monitored with time-lapse cameras increase detection of pythons and other snakes, 2024, PeerJ (12) -
- A genomic hotspot of diversifying selection and structural change in the hoary bat (Lasiurus cinereus), 2024, PeerJ (12) -
- Metabarcoding is (usually) more cost effective than seining or qPCR for detecting tidewater gobies and other estuarine fishes, 2024, PeerJ (12) -
- Assessing the ecological risk of heavy metal sediment contamination from Port Everglades Florida USA, 2023, PeerJ (11) -
- Data mining reveals tissue-specific expression and host lineage-associated forms of Apis mellifera filamentous virus, 2023, PeerJ
- Investigating microbial size classes associated with the transmission of stony coral tissue loss disease (SCTLD), 2023, PeerJ (11) -
- Bighorn sheep associations: Understanding tradeoffs of sociality and implications for disease transmission, 2023, PeerJ (11) -
- Accounting for spatial habitat and management boundaries when estimating forest bird population distribution and density: Inferences from a soap film smoother, 2023, PeerJ (11) -
- Assessing arthropod diversity metrics derived from stream environmental DNA: Spatiotemporal variation and paired comparisons with manual sampling, 2023, PeerJ (11) -
- Pandemic-driven changes in the nearshore non-commercial fishery in Hawai'i: Catch photos posted to social media capture changes in fisher behavior, 2023, PeerJ (11) -
- Unified methods in collecting, preserving, and archiving coral bleaching and restoration specimens to increase sample utility and interdisciplinary collaboration, 2022, PeerJ (10) -
- Genome resequencing clarifies phylogeny and reveals patterns of selection in the toxicogenomics model Pimephales promelas, 2022, PeerJ (10) -
- Hydrological and lock operation conditions associated with paddlefish and bigheaded carp dam passage on a large and small scale in the Upper Mississippi River (Pools 14–18), 2022, PeerJ (10) -
- Using a mechanistic framework to model the density of an aquatic parasite Ceratonova shasta, 2022, PeerJ (10) -
- Positively selected genes in the hoary bat (Lasiurus cinereus) lineage: Prominence of thymus expression, immune and metabolic function, and regions of ancient synteny, 2022, PeerJ (10) -
- Predicted distribution of a rare and understudied forest carnivore: Humboldt marten (Martes caurina humboldtensis), 2021, PeerJ (9) -
- Historical effective population size of North American hoary bat (Lasiurus cinereus) and challenges to estimating trends in contemporary effective breeding population size from archived samples, 2021, PeerJ (9) -
- Composition and distribution of fish environmental DNA in an Adirondack watershed, 2021, PeerJ (9) -
- Effects of early life stage exposure of largemouth bass to atrazine or a model estrogen (17α-ethinylestradiol), 2020, PeerJ (8) -
- Identifying mangrove-coral habitats in the Florida Keys, 2020, PeerJ (8) -
- Slender salamanders (genus Batrachoseps) reveal Southern California to be a center for the diversification, persistence, and introduction of salamander lineages, 2020, PeerJ (8) -
- Distribution of deep-water scleractinian and stylasterid corals across abiotic environmental gradients on three seamounts in the Anegada Passage, 2020, PeerJ (8) -
- An updated genetic marker for detection of Lake Sinai Virus and metagenetic applications, 2020, PeerJ (8) -
- Historical museum collections and contemporary population studies implicate roads and introduced predatory bullfrogs in the decline of western pond turtles, 2020, PeerJ (8) -
- Establishment of brown anoles (Anolis sagrei) across a southern California county and potential interactions with a native lizard species, 2020, PeerJ (8) -
- Uptake and toxicity of clothianidin to monarch butterflies from milkweed consumption, 2020, PeerJ (8) -
- Monitoring nearshore ecosystem health using Pacific razor clams (Siliqua patula) as an indicator species, 2020, PeerJ (8) -
- A revised Holocene coral sea-level database from the Florida reef tract, USA, 2020, PeerJ (8) -
- Species recovery and recolonization of past habitats: Lessons for science and conservation from sea otters in estuaries, 2019, PeerJ (7) -
- Plant and insect herbivore community variation across the Paleocene–Eocene boundary in the Hanna Basin, southeastern Wyoming, 2019, PeerJ
- Adapterama II: Universal amplicon sequencing on Illumina platforms (TaggiMatrix), 2019, PeerJ
- Physiological and gene transcription assays to assess responses of mussels to environmental changes, 2019, PeerJ
- Geographic context affects the landscape change and fragmentation caused by wind energy facilities, 2019, PeerJ (7) -
- Mammut pacificus sp. nov., a newly recognized species of mastodon from the Pleistocene of western North America, 2019, PeerJ (7) -
- Relative abundance and molecular evolution of Lake Sinai Virus (Sinaivirus) clades, 2019, PeerJ (7) -
- An experimental comparison of composite and grab sampling of stream water for metagenetic analysis of environmental DNA, 2018, PeerJ (6) -
- Ontogenetic changes in swimming speed of silver carp, bighead carp, and grass carp larvae: implications for larval dispersal, 2018, PeerJ (6) -
- Genetic assessment of a bighorn sheep population expansion in the Silver Bell Mountains, Arizona, 2018, PeerJ (6) -
- The influence of different deep-sea coral habitats on sediment macrofaunal community structure and function, 2018, PeerJ (6) -
- Evaluating outcomes of management targeting the recovery of a migratory songbird of conservation concern, 2018, PeerJ
- Distribution and seasonal differences in Pacific Lamprey and Lampetra spp eDNA across 18 Puget Sound watersheds, 2018, PeerJ (6) -
- Genomic evolution, recombination, and inter-strain diversity of chelonid alphaherpesvirus 5 from Florida and Hawaii green sea turtles with fibropapillomatosis, 2018, PeerJ (6) -
- Skin and fur bacterial diversity and community structure on American southwestern bats: effects of habitat, geography and bat traits, 2017, PeerJ (5) -
- Lionfish (Pterois spp.) invade the upper-bathyal zone in the western Atlantic, 2017, PeerJ
- Density estimates of monarch butterflies overwintering in central Mexico, 2017, PeerJ (5) -
- Experts correctly describe demography associated with historical decline of the endangered Indiana bat, but not recent period of stationarity, 2017, PeerJ (5) -
- Simulated mussel mortality thresholds as a function of mussel biomass and nutrient loading, 2017, PeerJ (5) -
- Effects of wind energy generation and white-nose syndrome on the viability of the Indiana bat, 2016, PeerJ
- Clawpack: Building an open source ecosystem for solving hyperbolic PDEs, 2016, PeerJ (2) -
- Daniel Goodman’s empirical approach to Bayesian statistics, 2016, PeerJ
- Bacterial community diversity of the deep-sea octocoral Paramuricea placomus, 2016, PeerJ (4) -
- First records of Canis dirus and Smilodon fatalis from the late Pleistocene Tule Springs local fauna, upper Las Vegas Wash, Nevada, 2016, PeerJ (4) -
- A hierarchical model of daily stream temperature using air-water temperature synchronization, autocorrelation, and time lags, 2016, PeerJ (4) -
- Updating movement estimates for American black ducks (Anas rubripes), 2016, PeerJ (4) -
- Assessing shoreline exposure and oyster habitat suitability maximizes potential success for sustainable shoreline protection using restored oyster reefs, 2015, PeerJ (3) -
- Challenges to a molecular approach to prey identification in the Burmese python, Python molurus bivittatus, 2015, PeerJ (3) -
- Oyster reef restoration supports increased nekton biomass and potential commercial fishery value, 2015, PeerJ (3) -
- Optimization in the utility maximization framework for conservation planning: a comparison of solution procedures in a study of multifunctional agriculture, 2014, PeerJ (2) -
- Response of reef corals on a fringing reef flat to elevated suspended-sediment concentrations: Moloka‘i, Hawai‘i, 2014, PeerJ