Sediments are an important component of the San Francisco Bay estuarine system. Potentially toxic substances, such as metals and pesticides, adsorb to sediment particles (Kuwabara and others, 1989; Domagalski and Kuivila, 1993). Sediments on the bottom of the bay provide the habitat for benthic communities that can ingest these substances and introduce them into the food web (Luoma and others, 1985). Nutrients, metals, and other substances are stored in bottom sediments and pore water in which chemical reactions occur and which provide an important source and/or sink to the water column (Hammond and others, 1985; Flegal and others, 1991). The transport and fate of suspended sediment is an important factor in determining the transport and fate of the constituents adsorbed on the sediment. Seasonal changes in sediment erosion and deposition patterns contribute to seasonal changes in the abundance of benthic macroinvertebrates (Nichols and Thompson, 1985). Tidal marshes are an ecologically important habitat that were created and are maintained by sedimentation processes (Atwater and others, 1979). In Suisun Bay, the maximum suspended-sediment concentration marks the position of the turbidity maximum, which is a crucial ecological region in which suspended sediment, nutrients, phytoplankton, zooplankton, larvae, and juvenile fish accumulate (Peterson and others, 1975; Arthur and Ball, 1979; Kimmerer, 1992; Jassby and Powell, 1994). Suspended sediments confine the photic zone to the upper part of the water column, and this limitation on light availability is a major control on phytoplankton production in San Francisco Bay (Cloern, 1987; Cole and Cloern, 1987). Suspended sediments also deposit in ports and shipping channels, which must be dredged to maintain navigation (U.S. Environmental Protection Agency, 1992).