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Publication Extents

Not all publications have extents, not all extents are completely accurate
Does behavioural thermoregulation underlie seasonal movements in Lake Erie walleye?
Graham D. Raby, Christopher Vandergoot, Todd A. Hayden, Matthew D. Faust, Richard T. Kraus, John M. Dettmers, Steven J. Cooke, Yingming Zhao, Aaron T. Fisk, Charles C. Krueger
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 488-496
Thermoregulation is presumed to be a widespread determinant of behaviour in fishes, but has not often been investigated as a mechanism shaping long-distance migrations. We used acoustic telemetry and animal-borne thermal loggers to test the hypothesis that seasonal migration in adult walleye (Sander vitreus) in Lake Erie is size- and...
Bottom trawl assessment of Lake Ontario prey fishes
Brian Weidel, Michael J. Connerton, Jeremy Holden
2018, Report, NYSDEC Lake Ontario Annual Report 2017
Managing Lake Ontario fisheries in an ecosystem-context requires prey fish community and population data. Since 1978, multiple annual bottom trawl surveys have quantified prey fish dynamics to inform management relative to published Fish Community Objectives. In 2017, two whole-lake surveys collected 341 bottom trawls (spring: 204, fall: 137), at depths...
Rearing environment influences boldness and prey acquisition behavior, and brain and lens development of bull trout
William R. Brignon, Martin M. Pike, Lars O.E. Ebbesson, Howard A. Schaller, James T. Peterson, Carl B. Schreck
2018, Environmental Biology of Fishes (101) 383-401
Animals reared in barren captive environments exhibit different developmental trajectories and behaviors than wild counterparts. Hence, the captive phenotypes may influence the success of reintroduction and recovery programs for threatened and endangered species. We collected wild bull trout embryos from the Metolius River Basin, Oregon and reared them in differing...
Demographic drivers of a refugee species: Large‐scale experiments guide strategies for reintroductions of hirola
Abdullahi H. Ali, Matthew J. Kauffman, Rajan Amin, Amos Kibara, Juliet King, David P. Mallon, Charles Musyoki, Jacob R. Goheen
2018, Ecological Applications (28) 275-283
Effective reintroduction strategies require accurate estimates of vital rates and the factors that influence them. The hirola (Beatragus hunteri) is the rarest antelope on Earth, with a global population size of <500 individuals restricted to the Kenya–Somali border. We estimated vital rates of hirola populations exposed to varying levels of...
Monitoring Least Bitterns (Ixobrychis exilis) in Vermont: Detection probability and occupancy modeling
Aswini Cherukuri, Allan Strong, Therese M. Donovan
2018, Northeastern Naturalist (25) 56-71
Ixobrychus exillis (Least Bittern) is listed as a species of high concern in the North American Waterbird Conservation Plan and is a US Fish and Wildlife Service migratory bird species of conservation concern in the Northeast. Little is known about the population of Least Bitterns in the Northeast because of their...
High‐prevalence and low‐intensity Ichthyophonus infections in Pacific Halibut
Paul Hershberger, Jacob L. Gregg, Claude L. Dykstra
2018, Journal of Aquatic Animal Health (30) 13-19
Ichthyophonus occurred at high prevalence but low intensity in Pacific Halibut Hippoglossus stenolepis throughout the West Coast of North America, ranging from coastal Oregon to the Bering Sea. Infection prevalence in adults was variable on spatial and temporal scales, with the lowest prevalence typically occurring on the edges of the geographic range and...
Response of beach-nesting American Oystercatchers to off-road vehicles: An experimental approach reveals physiological nuances and decreased nest attendance
Shilo K. Felton, Kenneth H. Pollock, Theodore R. Simons
2018, The Condor (120) 47-62
Shorebird populations face increasing challenges as rising sea levels and growing human populations constrain their breeding habitats. On recreational beaches, the nesting season often coincides with a season of high visitor use, increasing the potential for conflict, which may negatively influence beach-nesting shorebird species. We designed a field experiment to...
Quantifying seining detection probability for fishes of Great Plains sand‐bed rivers
Robert Mollenhauer, Daniel R. Logue, Shannon K. Brewer
2018, Transactions of the American Fisheries Society (147) 329-341
Species detection error (i.e., imperfect and variable detection probability) is an essential consideration when investigators map distributions and interpret habitat associations. When fish detection error that is due to highly variable instream environments needs to be addressed, sand‐bed streams of the Great Plains represent a unique challenge. We quantified seining...
Evidence for regional nitrogen stress on chlorophyll a in lakes across large landscape and climate gradients
Christopher T. Filstrup, Tyler Wagner, Samantha K. Oliver, Craig A. Stow, Katherine E. Webster, Emily H. Stanley, John A. Downing
2018, Limnology and Oceanography (63) S324-S339
Nitrogen (N) and phosphorus (P) commonly stimulate phytoplankton production in lakes, but recent observations from lakes from an agricultural region suggest that nitrate may have a subsidy‐stress effect on chlorophyll a (Chl a). It is unclear, however, how generalizable this effect might be. Here, we analyzed a large water quality dataset of 2385...
U.S. Pacific coastal wetland resilience and vulnerability to sea-level rise
Karen M. Thorne, Glen M. MacDonald, Glenn R. Guntenspergen, Richard F. Ambrose, Kevin J. Buffington, Bruce D. Dugger, Chase M. Freeman, Christopher Janousek, Lauren N. Brown, Jordan A. Rosencranz, James Homquist, John P. Smol, Kathryn Hargan, John Y. Takekawa
2018, Science Advances (4)
We used a first-of-its-kind comprehensive scenario approach to evaluate both the vertical and horizontal response of tidal wetlands to projected changes in the rate of sea-level rise (SLR) across 14 estuaries along the Pacific coast of the continental United States. Throughout the U.S. Pacific region, we found that tidal wetlands...
Nest survival modelling using a multi-species approach in forests managed for timber and biofuel feedstock
Zachary G. Loman, Adrian P. Monroe, Samuel K. Riffell, Darren A. Miller, Francisco Vilella, Bradley R. Wheat, Scott A. Rush, James A. Martin
2018, Journal of Applied Ecology (55) 937-946
Switchgrass (Panicum virgatum) intercropping is a novel forest management practice for biomass production intended to generate cellulosic feedstocks within intensively managed loblolly pine‐dominated landscapes. These pine plantations are important for early‐successional bird species, as short rotation times continually maintain early‐successional habitat. We tested the efficacy of using community models...
Associations between cyanobacteria and indices of secondary production in the western basin of Lake Erie
James H. Larson, Mary Anne Evans, Robert J. Kennedy, Sean Bailey, Keith A. Loftin, Zachary R. Laughrey, Robin Femmer, Jeff Schaeffer, William B. Richardson, Timothy Wynne, J. C. Nelson, Joseph W. Duris
2018, Limnology and Oceanography (63) S232-S243
Large lakes provide a variety of ecological services to surrounding cities and communities. Many of these services are supported by ecological processes that are threatened by the increasing prevalence of cyanobacterial blooms which occur as aquatic ecosystems experience cultural eutrophication. Over the past 10 yr, Lake Erie experienced cyanobacterial blooms...
Species‐ and habitat‐specific otolith chemistry patterns inform riverine fisheries management
William Radigan, Andrew K. Carlson, Jeremy Kientz, Steven R. Chipps, Mark J. Fincel, Brian D. S. Graeb
2018, River Research and Applications (34) 279-287
Geology and hydrology are drivers of water chemistry and thus important considerations for fish otolith chemistry research. However, other factors such as species and habitat identity may have predictive ability, enabling selection of appropriate elemental signatures prior to costly, perhaps unnecessary water/age‐0 fish sampling. The goal...
Geoelectric hazard assessment: the differences of geoelectric responses during magnetic storms within common physiographic zones
Stephen W. Cuttler, Jeffrey J. Love, Andrei Swidinsky
2018, Earth, Planets and Space (70)
Geomagnetic field data obtained through the INTERMAGNET program are convolved with with magnetotelluric surface impedance from four EarthScope USArray sites to estimate the geoelectric variations throughout the duration of a magnetic storm. A duration of time from June 22, 2016, to June 25, 2016, is considered which encompasses a magnetic storm of...
Stability and change in kelp forest habitats at San Nicolas Island
Michael C. Kenner, M. Tim Tinker
2018, Western North American Naturalist (78) 633-643
Kelp forest communities are highly variable over space and time. Despite this complexity it has been suggested that kelp forest communities can be classified into one of 2 states: kelp dominated or sea urchin dominated. It has been further hypothesized that these represent “alternate stable states” because a site can...
Drivers of variability in public‐supply water use across the contiguous United States
Scott C. Worland, Scott Steinschneider, George M. Hornberger
2018, Water Resources Research (54) 1868-1889
This study explores the relationship between municipal water use and an array of climate, economic, behavioral, and policy variables across the contiguous U.S. The relationship is explored using Bayesian‐hierarchical regression models for over 2,500 counties, 18 covariates, and three higher‐level grouping variables. Additionally, a second analysis is included for 83...
Osteopilus septentrionalis (Cuban treefrog)
Brad M. Glorioso, Philip Vanbergen, Joseph Roy, Matthew Walter, Lauren Leonpacher, Mark Freistak
2018, Herpetological Review (49) 70-71
USA: LOUISIANA: east baton Rouge paRish: private property in a garden center on a bromeliad in the 1700 block of Millerville Road in Baton Rouge (ca. 30.443°N, 91.023°W; WGS 84). 29 November 2016. Joseph Roy. Verified by Hardin Waddle. Florida Museum of Natural History (UF 181952; photo voucher). New parish...
THRESH—Software for tracking rainfall thresholds for landslide and debris-flow occurrence, user manual
Rex L. Baum, Sarah J. Fischer, Jacob C. Vigil
2018, Techniques and Methods 14-A2
Precipitation thresholds are used in many areas to provide early warning of precipitation-induced landslides and debris flows, and the software distribution THRESH is designed for automated tracking of precipitation, including precipitation forecasts, relative to thresholds for landslide occurrence. This software is also useful for analyzing multiyear precipitation records to compare...
General introduction for the “National Field Manual for the Collection of Water-Quality Data”
U.S. Geological Survey
2018, Techniques and Methods 9-A0
BackgroundAs part of its mission, the U.S. Geological Survey (USGS) collects data to assess the quality of our Nation’s water resources. A high degree of reliability and standardization of these data are paramount to fulfilling this mission. Documentation of nationally accepted methods used by USGS personnel serves to maintain consistency...
AMModels: An R package for storing models, data, and metadata to facilitate adaptive management
Therese M. Donovan, Jonathan Katz
2018, PLoS ONE (13) 1-57
Agencies are increasingly called upon to implement their natural resource management programs within an adaptive management (AM) framework. This article provides the background and motivation for the R package, AMModels. AMModels was developed under R version 3.2.2. The overall goal of AMModels is simple: To codify knowledge in the form of models and...
Future southcentral US wildfire probability due to climate change
Michael C. Stambaugh, Richard P. Guyette, Esther D. Stroh, Matthew A. Struckhoff, Joanna B. Whittier
2018, Climate Change (147) 617-631
Globally, changing fire regimes due to climate is one of the greatest threats to ecosystems and society. In this paper, we present projections of future fire probability for the southcentral USA using downscaled climate projections and the Physical Chemistry Fire Frequency Model (PC2FM). Future fire probability is projected to both...
Anthropogenic impact in the Mayan Lowlands of Petén, Guatemala, during the last 5500 years
D. Battistel, Marco Roman, A Marchetti, Natalie M. Kehrwald, Marta Radaelli, Eleanora Balliana, Giuseppina Toscano, Carlo Barbante
2018, Journal of Quaternary Science (33) 166-176
Trace and rare earth elements from a Lake Peten Itzá (Guatemala) sediment core depict the geochemical dynamics affecting the lake from ~5500 y BP to the present. This timing encompasses the Preclassic (4000 to 1700 y BP) and Classic Periods (1700-1000 y BP) when thriving Maya societies extensively cleared land...
Overcoming equifinality: Leveraging long time series for stream metabolism estimation
Alison P. Appling, Robert O. Hall Jr., Charles B. Yackulic, Maite Arroita
2018, Journal of Geophysical Research: Biogeosciences (123) 624-645
The foundational ecosystem processes of gross primary production (GPP) and ecosystem respiration (ER) cannot be measured directly but can be modeled in aquatic ecosystems from subdaily patterns of oxygen (O2) concentrations. Because rivers and streams constantly exchange O2 with the atmosphere, models must either use empirical estimates of the gas exchange...
Spatial and spectral interpolation of ground-motion intensity measure observations
Charles Worden, Eric M. Thompson, Jack W. Baker, Brendon A. Bradley, Nico Luco, David J. Wald
2018, Bulletin of the Seismological Society of America (108) 866-875
Following a significant earthquake, ground‐motion observations are available for a limited set of locations and intensity measures (IMs). Typically, however, it is desirable to know the ground motions for additional IMs and at locations where observations are unavailable. Various interpolation methods are available, but because IMs or their logarithms are...
Suspended-sediment transport from the Green-Duwamish River to the Lower Duwamish Waterway, Seattle, Washington, 2013–17
Craig A. Senter, Kathleen E. Conn, Robert W. Black, Norman Peterson, Ann M. Vanderpool-Kimura, James R. Foreman
2018, Open-File Report 2018-1029
The Green-Duwamish River transports watershed-derived sediment to the Lower Duwamish Waterway Superfund site near Seattle, Washington. Understanding the amount of sediment transported by the river is essential to the bed sediment cleanup process. Turbidity, discharge, suspended-sediment concentration (SSC), and particle-size data were collected by the U.S. Geological Survey (USGS)...