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Not all publications have extents, not all extents are completely accurate
Concentrations of environmental DNA (eDNA) reflect spawning salmon abundance at fine spatial and temporal scales
Michael D. Tillotson, Ryan P. Kelly, Jeffrey J. Duda, Marshal S. Hoy, James Kralj, Thomas P. Quinn
2018, Biological Conservation (220) 1-11
Developing fast, cost-effective assessments of wild animal abundance is an important goal for many researchers, and environmental DNA (eDNA) holds much promise for this purpose. However, the quantitative relationship between species abundance and the amount of DNA present in the environment is likely to vary substantially among taxa and with...
Vegetation responses to sagebrush-reduction treatments measured by satellites
Aaron N. Johnston, Erik A. Beever, Jerod Merkle, Geneva W. Chong
2018, Ecological Indicators (87) 66-76
Time series of vegetative indices derived from satellite imagery constitute tools to measure ecological effects of natural and management-induced disturbances to ecosystems. Over the past century, sagebrush-reduction treatments have been applied widely throughout western North America to increase herbaceous vegetation for livestock and wildlife....
Dietary plasticity in a nutrient-rich system does not influence brown bear (Ursus arctos) body condition or denning
Lindsey S. Mangipane, Jerrold L. Belant, Diana J. R. Lafferty, David D. Gustine, Tim L. Hiller, Michael E. Colvin, Buck A. Mangipane, Grant V. Hilderbrand
2018, Polar Biology (41) 763-772
Behavioral differences within a population can allow use of a greater range of resources among individuals. The brown bear (Ursus arctos) is a generalist omnivore that occupies diverse habitats and displays considerable plasticity in food use. We evaluated whether brown bear foraging that resulted in deviations from a...
Salinity tolerance of non-native suckermouth armoured catfish (Loricariidae: Pterygoplichthys sp.) from Kerala, India
A. Biju Kumar, Pamela J. Schofield, Smrithy Raj, Sima Satheesh
2018, Management of Biological Invasions (9) 49-57
Loricariid catfishes of the genus Pterygoplichthys are native to South America and have been introduced in many localities around the world. They are freshwater fishes, but may also use low-salinity habitats such as estuaries for feeding or dispersal. Here we report results of a field survey and salinity-tolerance experiments for...
Modeling drivers of phosphorus loads in Chesapeake Bay tributaries and inferences about long-term change
Karen R. Ryberg, Joel D. Blomquist, Lori A. Sprague, Andrew J. Sekellick, Jennifer L. Keisman
2018, Science of the Total Environment (616–617) 1423-1430
Causal attribution of changes in water quality often consists of correlation, qualitative reasoning, listing references to the work of others, or speculation. To better support statements of attribution for water-quality trends, structural equation modeling was used to model the causal factors of total phosphorus loads in the Chesapeake Bay watershed....
Assessment of undiscovered continuous oil and gas resources in the Bohaiwan Basin Province, China, 2017
Christopher J. Schenk, Marilyn E. Tennyson, Tracey J. Mercier, Cheryl A. Woodall, Thomas M. Finn, Michael E. Brownfield, Phuong A. Le, Timothy R. Klett, Stephanie B. Gaswirth, Kristen R. Marra, Heidi M. Leathers-Miller, Christopher J. Potter
2018, Fact Sheet 2017-3082
Using a geology-based assessment methodology, the U.S. Geological Survey estimated mean undiscovered, technically recoverable continuous resources of 2.0 billion barrels of oil and 20.3 trillion cubic feet of gas in the Bohaiwan Basin Province, China....
Predicting effects of large-scale reforestation on native and exotic birds
Liba Pejchar, Travis Gallo, Mevin Hooten, Gretchen C. Daily
2018, Diversity and Distributions (24) 811-819
AimEcological restoration is critical for recovering biodiversity and ecosystem services, yet designing interventions to achieve particular outcomes remains fraught with challenges. In the extensive regions where non-native species are firmly established, it is unlikely that historical conditions can be fully reinstated. To what degree, and how rapidly,...
Floodplain trapping and cycling compared to streambank erosion of sediment and nutrients in an agricultural watershed
Jaimie Gillespie, Gregory E. Noe, Cliff R. Hupp, Allen C. Gellis, Edward R. Schenk
2018, Journal of the American Water Resources Association (54) 565-582
Floodplains and streambanks can positively and negatively influence downstream water quality through interacting geomorphic and biogeochemical processes. Few studies have measured those processes in agricultural watersheds. We measured inputs (floodplain sedimentation and dissolved inorganic loading), cycling (floodplain soil nitrogen [N] and phosphorus [P] mineralization), and losses (bank erosion) of sediment,...
Population genomic analysis suggests strong influence of river network on spatial distribution of genetic variation in invasive saltcedar across the southwestern United States
Soo-Rang Lee, Yeong-Seok Jo, Chan-Ho Park, Jonathan M. Friedman, Matthew S. Olson
2018, Molecular Ecology (27) 636-646
Understanding the complex influences of landscape and anthropogenic elements that shape the population genetic structure of invasive species provides insight into patterns of colonization and spread. The application of landscape genomics techniques to these questions may offer detailed, previously undocumented insights into factors influencing species invasions. We investigated the spatial...
Assessment of water resources and the potential effects from oil and gas development in the Bureau of Land Management Tri-County planning area, Sierra, Doña Ana, and Otero Counties, New Mexico
Johanna M. Blake, Keely Miltenberger, Anne M. Stewart, Andre Ritchie, Jennifer Montoya, Corey Durr, Amy R. McHugh, Emmanuel G. Charles
2018, Scientific Investigations Report 2017-5151
The U.S. Geological Survey (USGS), in cooperation with the Bureau of Land Management, conducted a study to assess the water resources and potential effects on the water resources from oil and gas development in the Tri-County planning area, Sierra, Doña Ana, and Otero Counties, New Mexico. Publicly available data were...
Juvenile coho salmon growth and health in streams across an urbanization gradient
Andrew R. Spanjer, Patrick W. Moran, Kimberly Larsen, Lisa Wetzel, Adam G. Hansen, David A. Beauchamp
2018, Science of the Total Environment (625) 1003-1012
Expanding human population and urbanization alters freshwater systems through structural changes to habitat, temperature effects from increased runoff and reduced canopy cover, altered flows, and increased toxicants. Current stream assessments stop short of measuring health or condition of species utilizing these freshwater habitats and fail to link specific stressors mechanistically...
Relationships between indicators of acid-base chemistry and fish assemblages in streams of the Great Smoky Mountains National Park
Barry P. Baldigo, Matt A. Kulp, John S. Schwartz
2018, Ecological Indicators (88) 465-484
The acidity of many streams in the Great Smoky Mountains National Park (GRSM) has increased significantly since pre-industrial (∼1850) times due to the effects of highly acidic atmospheric deposition in poorly buffered watersheds. Extensive stream-monitoring programs since 1993 have shown that fish and macroinvertebrate assemblages have been adversely affected in...
Removing rural roads from the National Land Cover Database to create improved urban maps for the United States, 1992-2011
Christopher E. Soulard, William Acevedo, Stephen V. Stehman
2018, Photogrammetric Engineering and Remote Sensing (84) 101-109
Quantifying change in urban land provides important information to create empirical models examining the effects of human land use. Maps of developed land from the National Land Cover Database (NLCD) of the conterminous United States include rural roads in the developed land class and therefore overestimate the amount of urban...
Demographic modelling reveals a history of divergence with gene flow for a glacially tied stonefly in a changing post-Pleistocene landscape
Scott Hotaling, Clint C. Muhlfeld, J. Joseph Giersch, Omar Ali, Steve Jordan, Michael R. Miller, Gordon Luikart, David W. Weisrock
2018, Journal of Biogeography (45) 304-317
AimClimate warming is causing extensive loss of glaciers in mountainous regions, yet our understanding of how glacial recession influences evolutionary processes and genetic diversity is limited. Linking genetic structure with the influences shaping it can improve understanding of how species respond to environmental change. Here, we used genome-scale data and...
Hypocenter relocation along the Sunda arc in Indonesia, using a 3D seismic velocity model
Andri Dian Nugraha, Hasbi A. Shiddiqi, Sri Widiyantoro, Clifford H. Thurber, Jeremy D. Pesicek, Haijiang Zhang, Samsul H. Wiyono, Mohamad Ramadhan, Wandano, Mahsyur Irsyam
2018, Seismological Research Letters (89) 603-612
The tectonics of the Sunda arc region is characterized by the junction of the Eurasian and Indo‐Australian tectonic plates, causing complex dynamics to take place. High‐seismicity rates in the Indonesian region occur due to the interaction between these tectonic plates. The availability of a denser network of seismometers after the...
Molecular testing of adult Pacific salmon and trout (Oncorhynchus spp.) for several RNA viruses demonstrates widespread distribution of piscine orthoreovirus in Alaska and Washington
Maureen K. Purcell, Rachel L. Thompson, Joy Evered, John Kerwin, Ted R. Meyers, Bruce Stewart, James Winton
2018, Journal of Fish Diseases (41) 347-355
This research was initiated in conjunction with a systematic, multiagency surveillance effort in the United States (U.S.) in response to reported findings of infectious salmon anaemia virus (ISAV) RNA in British Columbia, Canada. In the systematic surveillance study reported in a companion paper, tissues from various salmonids taken from Washington...
Year-round presence of neonicotinoid insecticides in tributaries to the Great Lakes, USA
Michelle L. Hladik, Steven R. Corsi, Dana W. Kolpin, Austin K. Baldwin, Brett R. Blackwell, Jenna E. Cavallin
2018, Environmental Pollution (235) 1022-1029
To better characterize the transport of neonicotinoid insecticides to the world's largest freshwater ecosystem, monthly samples (October 2015–September 2016) were collected from 10 major tributaries to the Great Lakes, USA. For the monthly tributary samples, neonicotinoids were detected in every month sampled and five of the six target neonicotinoids were...
Wild-harvested venison yields and sharing by Michigan deer hunters
Amber D. Goguen, Shawn J. Riley, John F. Organ, Brent A. Rudolph
2018, Human Dimensions of Wildlife (23) 197-212
An increased societal focus on wildlife as food and recent policy deliberations regarding legal markets for wild-harvested meat are encouraging wildlife managers and researchers to examine the amount, use, and distribution of meat yielded through recreational hunting. We used responses to questions on the Michigan Deer Harvest Study to estimate...
Uptake and distribution of organo-iodine in deep-sea corals
Nancy G. Prouty, E. Brendan Roark, Leslye M. Mohon, Ching-Chih Chang
2018, Journal of Environmental Radioactivity (187) 122-132
Understanding iodine concentration, transport, and bioavailability is essential in evaluating iodine's impact to the environment and its effectiveness as an environmental biogeotracer. While iodine and its radionuclides have proven to be important tracers in geologic and biologic studies, little is known about transport of this element to the deep sea...
Accurate ocean bottom seismometer positioning method inspired by multilateration technique
Omar Benazzouz, Luis M. Pinheiro, Luis M. A. Matias, Alexandra Afilhado, Daniel Herold, Seth S. Haines
2018, Mathematical Geosciences (50) 569-584
The positioning of ocean bottom seismometers (OBS) is a key step in the processing flow of OBS data, especially in the case of self popup types of OBS instruments. The use of first arrivals from airgun shots, rather than relying on the acoustic transponders mounted in the OBS, is becoming...
Mapping elemental contamination on Palmyra Atoll National Wildlife Refuge
Matthew A. Struckhoff, Carl E. Orazio, Donald E. Tillitt, David K. Shaver, Diana M. Papoulias
2018, Marine Pollution Bulletin (128) 97-105
Palmyra Atoll, once a WWII U.S. Navy air station, is now a U.S. National Wildlife Refuge with nearly 50 km2 of coral reef and 275 ha of emergent lands with forests of Pisonia grandistrees and colonies of several bird species. Due to the known elemental and organic contamination from chemicals associated with aviation, power...
Shrubland carbon sink depends upon winter water availability in the warm deserts of North America
Joel A. Biederman, Russell L. Scott, John A. Arnone, Richard L. Jasoni, Marcy E. Litvak, Michael T. Moreo, Shirley A. Papuga, Guillermo E. Ponce-Campos, Adam P. Schreiner-McGraw, Enrique R. Vivoni
2018, Agricultural and Forest Meteorology (249) 407-419
Global-scale studies suggest that dryland ecosystems dominate an increasing trend in the magnitude and interannual variability of the land CO2 sink. However, such model-based analyses are poorly constrained by measured CO2 exchange in open shrublands, which is the most common global land cover type, covering ∼14% of Earth’s surface. Here we evaluate...
Time series sightability modeling of animal populations
Althea A. ArchMiller, Robert Dorazio, Katherine St. Clair, John R. Fieberg
2018, PLoS ONE (13) 1-16
Logistic regression models—or “sightability models”—fit to detection/non-detection data from marked individuals are often used to adjust for visibility bias in later detection-only surveys, with population abundance estimated using a modified Horvitz-Thompson (mHT) estimator. More recently, a model-based alternative for analyzing combined detection/non-detection and detection-only data was developed. This approach seemed...
Volcanic ash activates the NLRP3 inflammasome in murine and human macrophages
David Damby, Claire J. Horwell, Peter J. Baxter, Ulrich Kueppers, Max Schnurr, Donald B. Dingwell, Peter Duewell
2018, Frontiers in Immunology (8)
Volcanic ash is a heterogeneous mineral dust that is typically composed of a mixture of amorphous (glass) and crystalline (mineral) fragments. It commonly contains an abundance of the crystalline silica (SiO2) polymorph cristobalite. Inhalation of crystalline silica can induce inflammation by stimulating the NLRP3 inflammasome, a cytosolic receptor complex that...
Making ecological models adequate
Wayne M. Getz, Charles R. Marshall, Colin J. Carlson, Luca Giuggioli, Sadie J. Ryan, Stephanie S. Romanach, Carl Boettiger, Samuel D. Chamberlain, Laurel Larsen, Paolo D'Odorico, David O’Sullivan
2018, Ecology Letters (21) 153-166
Critical evaluation of the adequacy of ecological models is urgently needed to enhance their utility in developing theory and enabling environmental managers and policymakers to make informed decisions. Poorly supported management can have detrimental, costly or irreversible impacts on the environment and society. Here, we examine common issues in ecological...