Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California; 2016
Daniel J. Cain, Janet K. Thompson, Francis Parchaso, Sarah A. Pearson, A. Robin Stewart, Mathew Turner, David Barasch, Samuel N. Luoma
2017, Open-File Report 2017-1135
Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in south San Francisco Bay,...
Relative performance of three stream bed stability indices as indicators of stream health
Paul C Kusnierz, Christopher M. Holbrook
2017, Environmental Monitoring and Assessment (189) 1-10
Bed stability is an important stream habitat attribute because it affects geomorphology and biotic communities. Natural resource managers desire indices of bed stability that can be used under a wide range of geomorphic conditions, are biologically meaningful, and are easily incorporated into sampling protocols. To eliminate potential bias due to...
Probing magma reservoirs to improve volcano forecasts
Jacob B. Lowenstern, Thomas W. Sisson, Shaul Hurwitz
2017, Eos, Earth and Space Science News (98)
When it comes to forecasting eruptions, volcano observatories rely mostly on real-time signals from earthquakes, ground deformation, and gas discharge, combined with probabilistic assessments based on past behavior [Sparks and Cashman, 2017]. There is comparatively less reliance on geophysical and petrological understanding of subsurface magma reservoirs....
Temporal constraints on the potential role of fry odors as cues of past reproductive success for spawning lake trout
Tyler J. Buchinger, J. Ellen Marsden, Thomas R. Binder, Mar Huertas, Ugo Bussy, Ke Li, James E. Hanson, Charles C. Krueger, Weiming Li, Nicholas S. Johnson
2017, Ecology and Evolution (7) 10196-10206
Deciding where to reproduce is a major challenge for most animals. Many select habitats based upon cues of successful reproduction by conspecifics, such as the presence of offspring from past reproductive events. For example, some fishes select spawning habitat following odors released by juveniles whose rearing habitat overlaps with spawning...
Evidence for a climate-induced ecohydrological state shift in wetland ecosystems of the southern Prairie Pothole Region
Owen P. McKenna, David M. Mushet, Donald O. Rosenberry, James W. LaBaugh
2017, Climatic Change (145) 273-287
Changing magnitude, frequency, and timing of precipitation can influence aquatic-system hydrological, geochemical, and biological processes, in some cases resulting in system-wide shifts to an alternate state. Since the early 1990s, the southern Prairie Pothole Region has been subjected to an extended period of increased wetness resulting in marked changes to...
Movements and habitat use of White-fronted Geese (Anser albifrons frontalis) during the remigial molt in arctic Alaska, USA
Paul L. Flint, Brandt W. Meixell
2017, Waterbirds (40) 272-281
Proposed oil and gas leasing in the National Petroleum Reserve - Alaska has raised questions about possible impacts of development on molting Greater White-fronted Geese (Anser albifrons frontalis) and their habitats. We used GPS transmitters to record fine-scale location data of molting and post-molt White-fronted Geese to assess patterns of...
Organizing the pantry: cache management improves quality of overwinter food stores in a montane mammal
Rhiannon P. Jakopak, L. Embere Hall, Anna D. Chalfoun
2017, Journal of Mammalogy (98) 1674-1681
Many mammals create food stores to enhance overwinter survival in seasonal environments. Strategic arrangement of food within caches may facilitate the physical integrity of the cache or improve access to high-quality food to ensure that cached resources meet future nutritional demands. We used the American pika (Ochotona princeps), a food-caching...
Methods for converting continuous shrubland ecosystem component values to thematic National Land Cover Database classes
Matthew B. Rigge, Leila Gass, Collin G. Homer, George Z. Xian
2017, Open-File Report 2017-1119
The National Land Cover Database (NLCD) provides thematic land cover and land cover change data at 30-meter spatial resolution for the United States. Although the NLCD is considered to be the leading thematic land cover/land use product and overall classification accuracy across the NLCD is high, performance and consistency in...
Hydrogeology and water quality of sand and gravel aquifers in McHenry County, Illinois, 2009–14, and comparison to conditions in 1979
Amy M. Gahala
2017, Scientific Investigations Report 2017-5112
Baseline conditions for the sand and gravel aquifers (groundwater) in McHenry County, Illinois, were assessed using data from a countywide network of 44 monitoring wells collecting continuous water-level data from 2009–14. In 2010, water-quality data were collected from 41 of the monitoring wells, along with five additional monitoring wells...
Best practices for assessing forage fish fisheries-seabird resource competition
William J. Sydeman, Sarah Ann Thompson, Tycho Anker-Nilssen, Mayumi L. Arimitsu, Ashley Bennison, Sophie Bertrand, Philipp Boersch-Supan, Charlotte Boyd, Nicole C. Bransome, Robert J.M. Crawford, Francis Daunt, Robert W. Furness, Dimas Gianuca, Amanda Gladics, Laura Koehn, Jennifer W. Lang, Elizabeth Loggerwell, Taryn L. Morris, Elizabeth M. Phillips, Jennifer Provencher, Andre E. Punt, Claire Saraux, Lynne Shannon, Richard B. Sherley, Alejandro Simeone, Ross M. Wanless, Sarah Wanless, Stephani Zador
2017, Fisheries Research (194) 209-221
Worldwide, in recent years capture fisheries targeting lower-trophic level forage fish and euphausiid crustaceans have been substantial (∼20 million metric tons [MT] annually). Landings of forage species are projected to increase in the future, and this harvest may affect marine ecosystems and predator-prey interactions by removal or redistribution of biomass...
Monitoring eradication of European mouflon sheep from the Kahuku Unit of Hawai‘i Volcanoes National Park
Seth Judge, Steven C. Hess, Jonathan K. Faford, Dexter Pacheco, Christina Leopold
2017, Pacific Science (71) 425-436
European mouflon (Ovis gmelini musimon), the world's smallest wild sheep, have proliferated and degraded fragile native ecosystems in the Hawaiian Islands through browsing, bark stripping, and trampling, including native forests within Hawai‘i Volcanoes National Park (HAVO). HAVO resource managers initiated ungulate control efforts in the 469 km2 Kahuku Unit after it...
Fractional crystallization-induced variations in sulfides from the Noril’sk-Talnakh mining district (polar Siberia, Russia)
C.J. Duran, S-J. Barnes, P. Plese, M. Kudrna Prasek, Michael L. Zientek, P. Page
2017, Ore Geology Reviews (90) 326-351
The distribution of platinum-group elements (PGE) within zoned magmatic ore bodies has been extensively studied and appears to be controlled by the partitioning behavior of the PGE during fractional crystallization of magmatic sulfide liquids. However, other chalcophile elements, especially TABS (Te, As, Bi, Sb, and Sn) have been neglected despite...
Characterizing sources of uncertainty from global climate models and downscaling techniques
Adrienne Wootten, Adam Terando, Brian J. Reich, Ryan P. Boyles, Fred Semazzi
2017, Journal of Applied Meteorology and Climatology (56) 3245-3262
In recent years climate model experiments have been increasingly oriented towards providing information that can support local and regional adaptation to the expected impacts of anthropogenic climate change. This shift has magnified the importance of downscaling as a means to translate coarse-scale global climate model (GCM) output to a finer...
Selective transport of palynomorphs in marine turbiditic deposits: An example from the Ascension-Monterey Canyon system offshore central California
Mary McGann
2017, Quaternary International (469) 120-140
The pollen assemblage of a deep-sea core (15G) collected at lower bathyal depths (3491 m) on a levee of Monterey Canyon off central California was investigated to gain insights into the delivery processes of terrigenous material to submarine fans and the effect this transport has on the palynological record. Thirty-two...
Biostratigraphic and morphometric analyses of specimens from the calcareous nannofossil genus Tribrachiatus
Jean Self-Trail, Ellen Seefelt, Claire L. Shepherd, Victoria A. Martin
2017, Journal of Nannoplankton Research (37) 177-188
Biostratigraphic and morphometric analyses of calcareous nannofossil assemblages from one outcrop and two cored sections of lower Eocene sediments reveal the presence of two new species: Tribrachiatus lunatus sp. nov., and Tribrachiatus absidatus sp. nov. Differences between the new species and Tribrachiatus orthostylus are discussed. The first occurrence...
Delayed seismicity rate changes controlled by static stress transfer
Kayla A. Kroll, Keith B. Richards-Dinger, James H. Dieterich, Elizabeth S. Cochran
2017, Journal of Geophysical Research B: Solid Earth (122) 7951-7965
On 15 June 2010, a Mw5.7 earthquake occurred near Ocotillo, California, in the Yuha Desert. This event was the largest aftershock of the 4 April 2010 Mw7.2 El Mayor-Cucapah (EMC) earthquake in this region. The EMC mainshock and subsequent Ocotillo aftershock provide an opportunity to test the Coulomb failure hypothesis (CFS). We...
Climate change and alpine stream biology: progress, challenges, and opportunities for the future
Scott Hotaling, Debra S. Finn, J. Joseph Giersch, David W. Weisrock, Dean Jacobsen
2017, Biological Reviews (92) 2024-2045
In alpine regions worldwide, climate change is dramatically altering ecosystems and affecting biodiversity in many ways. For streams, receding alpine glaciers and snowfields, paired with altered precipitation regimes, are driving shifts in hydrology, species distributions, basal resources, and threatening the very existence of some habitats and biota. Alpine streams harbour...
Partial polygon pruning of hydrographic features in automated generalization
Alexander K. Stum, Barbara P. Buttenfield, Larry V. Stanislawski
2017, Transactions in GIS (21) 1061-1078
This paper demonstrates a working method to automatically detect and prune portions of waterbody polygons to support creation of a multi-scale hydrographic database. Water features are known to be sensitive to scale change; and thus multiple representations are required to maintain visual and geographic logic at smaller scales. Partial pruning...
Spatially explicit population estimates for black bears based on cluster sampling
J. Humm, J. Walter McCown, B.K. Scheick, Joseph D. Clark
2017, Journal of Wildlife Management (81) 1187-1201
We estimated abundance and density of the 5 major black bear (Ursus americanus) subpopulations (i.e., Eglin, Apalachicola, Osceola, Ocala-St. Johns, Big Cypress) in Florida, USA with spatially explicit capture-mark-recapture (SCR) by extracting DNA from hair samples collected at barbed-wire hair sampling sites. We employed a clustered sampling configuration with sampling...
Strong SH-to-Love wave scattering off the Southern California Continental Borderland
Chunquan Yu, Zhongwen Zhan, Egill Hauksson, Elizabeth S. Cochran
2017, Geophysical Research Letters (44) 10208-10215
Seismic scattering is commonly observed and results from wave propagation in heterogeneous medium. Yet, deterministic characterization of scatterers associated with lateral heterogeneities remains challenging. In this study, we analyze broadband waveforms recorded by the Southern California Seismic Network and observe strongly scattered Love waves following the arrival of teleseismic SH...
Systematic observations of the slip pulse properties of large earthquake ruptures
Diego Melgar, Gavin P. Hayes
2017, Geophysical Research Letters (44) 9691-9698
In earthquake dynamics there are two end member models of rupture: propagating cracks and self-healing pulses. These arise due to different properties of faults and have implications for seismic hazard; rupture mode controls near-field strong ground motions. Past studies favor the pulse-like mode of rupture; however, due to a variety...
Shear-wave velocity model from Rayleigh wave group velocities centered on the Sacramento/San Joaquin Delta
Jon Peter B. Fletcher, Jemile Erdem
2017, Pure and Applied Geophysics (174) 3825-3839
Rayleigh wave group velocities obtained from ambient noise tomography are inverted for an upper crustal model of the Central Valley, California, centered on the Sacramento/San Joaquin Delta. Two methods were tried; the first uses SURF96, a least-squares routine. It provides a good fit to the data, but convergence is dependent...
Buried shallow fault slip from the South Napa earthquake revealed by near-field geodesy
Benjamin A. Brooks, Sarah E. Minson, Craig L. Glennie, Johanna Nevitt, Timothy E. Dawson, Ron S. Rubin, Todd Ericksen, David A. Lockner, Kenneth W. Hudnut, Victoria E. Langenheim, Andrew Lutz, Jessica R. Murray, David P. Schwartz, Dana Zaccone
2017, Science Advances (3)
Earthquake-related fault slip in the upper hundreds of meters of Earth’s surface has remained largely unstudied because of challenges measuring deformation in the near field of a fault rupture. We analyze centimeter-scale accuracy mobile laser scanning (MLS) data of deformed vine rows within ±300 m of the principal surface expression...
Projected warming portends seasonal shifts of stream temperatures in the Crown of the Continent Ecosystem, USA and Canada
Leslie A. Jones, Clint C. Muhlfeld, Lucy A. Marshall
2017, Climatic Change (144) 641-655
Climate warming is expected to increase stream temperatures in mountainous regions of western North America, yet the degree to which future climate change may influence seasonal patterns of stream temperature is uncertain. In this study, a spatially explicit statistical model framework was integrated with empirical stream temperature data (approximately four...
Statistical design and analysis for plant cover studies with multiple sources of observation errors
Wilson J. Wright, Kathryn M. Irvine, Jeffrey M . Warren, Jenny K. Barnett
2017, Methods in Ecology and Evolution (8) 1832-1841
Effective wildlife habitat management and conservation requires understanding the factors influencing distribution and abundance of plant species. Field studies, however, have documented observation errors in visually estimated plant cover including measurements which differ from the true value (measurement error) and not observing a species that is present within...
