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Publication Extents

Not all publications have extents, not all extents are completely accurate
Data-driven modeling of background and mine-related acidity and metals in river basins
Michael J Friedel
2013, Environmental Pollution (184) 530-539
A novel application of self-organizing map (SOM) and multivariate statistical techniques is used to model the nonlinear interaction among basin mineral-resources, mining activity, and surface-water quality. First, the SOM is trained using sparse measurements from 228 sample sites in the Animas River Basin, Colorado. The model performance is validated by...
Forest calcium depletion and biotic retention along a soil nitrogen gradient
Steven S. Perakis, Emily R. Sinkhorn, Christina Catricala, Thomas D. Bullen, John A. Fitzpatrick, Justin D. Hynicka, Kermit Cromack Jr.
2013, Ecological Applications (23) 1947-1961
High nitrogen (N) accumulation in terrestrial ecosystems can shift patterns of nutrient limitation and deficiency beyond N toward other nutrients, most notably phosphorus (P) and base cations (calcium [Ca], magnesium [Mg], and potassium [K]). We examined how naturally high N accumulation from a legacy of symbiotic N fixation shaped P...
An alternative to soil taxonomy for describing key soil characteristics
Michael C. Duniway, Mark E. Miller, Joel R. Brown, Gordon Toevs
2013, Frontiers in Ecology and the Environment (11) 527-528
We are pleased to see the letter by Schimel and Chadwick (Front Ecol Environ 2013; 11[8]: 405–06), highlighting the importance of soil characterization in ecological and biogeochemical research and explaining the value of soil taxonomy, and we agree with the authors that reporting soil taxonomic classification would greatly increase the interpretive...
Effect of light, prey density, and prey type on the feeding rates of Hemimysis anomala
Kathleen E. Halpin, Brent T. Boscarino, Lars G. Rudstam, Mureen G. Walsh, Brian F. Lantry
2013, Hydrobiologia (720) 101-110
Hemimysis anomala is a near-shore mysid native to the Ponto-Caspian region that was discovered to have invaded Great Lakes ecosystems in 2006. We investigated feeding rates and prey preferences of adult and juvenile Hemimysis in laboratory experiments to gain insight on the potential for Hemimysis to disrupt food webs. For...
Combined impacts of current and future dust deposition and regional warming on Colorado River Basin snow dynamics and hydrology
Jeffrey S. Deems, Thomas H. Painter, Joseph J. Barsugli, Jayne Belnap, Bradley Udall
2013, Hydrology and Earth System Sciences (17) 4401-4413
The Colorado River provides water to 40 million people in seven western states and two countries and to 5.5 million irrigated acres. The river has long been overallocated. Climate models project runoff losses of 5–20% from the basin by mid-21st century due to human-induced climate change. Recent work has shown...
Genetic diversity and mutation of avian paramyxovirus serotype 1 (Newcastle disease virus) in wild birds and evidence for intercontinental spread
Andrew M. Ramey, Andrew B. Reeves, Haruko Ogawa, S. Ip, Kunitoshi Imai, V. N. Bui, Emi Yamaguchi, N. Y. Silko, C.L. Afonso
2013, Archives of Virology (158) 2495-2503
Avian paramyxovirus serotype 1 (APMV-1), or Newcastle disease virus, is the causative agent of Newcastle disease, one of the most economically important diseases for poultry production worldwide and a cause of periodic epizootics in wild birds in North America. In this study, we examined the genetic diversity of APMV-1 isolated...
A review on cylindrospermopsin: the global occurrence, detection, toxicity and degradation of a potent cyanotoxin
Armah A. de la Cruz, Anastasia Hiskia, Triantafyllos Kaloudis, Neil Chernoff, Donna Hill, Maria G. Antoniou, Xuexiang He, Keith Loftin, Kevin O’Shea, Cen Zhao, Miguel Pelaez, Changseok Han, Trevor J. Lynch, Dionysios D. Dionysiou
2013, Environmental Science: Processes and Impacts (15) 1979-2003
Cylindrospermopsin is an important cyanobacterial toxin found in water bodies worldwide. The ever-increasing and global occurrence of massive and prolonged blooms of cylindrospermopsin-producing cyanobacteria poses a potential threat to both human and ecosystem health. Its toxicity is associated with metabolic activation and may involve mechanisms that adversely affect a wide...
The significance of ultra-refracted surface gravity waves on sheltered coasts, with application to San Francisco Bay
D.M. Hanes, L. H. Erikson
2013, Estuarine, Coastal and Shelf Science (133) 129-136
Ocean surface gravity waves propagating over shallow bathymetry undergo spatial modification of propagation direction and energy density, commonly due to refraction and shoaling. If the bathymetric variations are significant the waves can undergo changes in their direction of propagation (relative to deepwater) greater than 90° over relatively short spatial scales....
Petrologic, tectonic, and metallogenic evolution of the southern segment of the ancestral Cascades magmatic arc, California and Nevada
Edward A. du Bray, David A. John, Brian L. Cousens
2013, Geosphere (10) 1-39
Ongoing arc magmatism along western North America was preceded by ancestral arc magmatism that began ca. 45 Ma and evolved into modern arc volcanism. The southern ancestral arc segment, active from ca. 30 to 3 Ma, adjoins the northern segment in northern California across a proposed subducted slab tear....
Consideration of reference points for the management of renewable resources under an adaptive management paradigm
Brian J. Irwin, Michael J. Conroy
2013, Environmental Conservation (40) 302-309
The success of natural resource management depends on monitoring, assessment and enforcement. In support of these efforts, reference points (RPs) are often viewed as critical values of management-relevant indicators. This paper considers RPs from the standpoint of objective-driven decision making in dynamic resource systems, guided by principles of structured decision...
Protocol for monitoring forest-nesting birds in National Park Service parks
Deanna K. Dawson, Murray G. Efford
2013, Report
These documents detail the protocol for monitoring forest-nesting birds in National Park Service parks in the National Capital Region Network (NCRN). In the first year of sampling, counts of birds should be made at 384 points on the NCRN spatially randomized grid, developed to sample terrestrial resources. Sampling should begin...
Estimating reef fish discard mortality using surface and bottom tagging: effects of hook injury and barotrauma
Paul J. Rudershausen, Jeffrey A. Buckel, Joseph E. Hightower
2013, Canadian Journal of Fisheries and Aquatic Sciences (71) 514-520
We estimated survival rates of discarded black sea bass (Centropristis striata) in various release conditions using tag–recapture data. Fish were captured with traps and hook and line from waters 29–34 m deep off coastal North Carolina, USA, marked with internal anchor tags, and observed for release condition. Fish tagged on...
Differences in extreme low salinity timing and duration differentially affect eastern oyster (Crassostrea virginica) size class growth and mortality in Breton Sound, LA
Megan K. LaPeyre, Benjamin S. Eberline, Thomas M. Soniat, Jerome F. La Peyre
2013, Estuarine, Coastal and Shelf Science (135) 146-157
Understanding how different life history stages are impacted by extreme or stochastic environmental variation is critical for predicting and modeling organism population dynamics. This project examined recruitment, growth, and mortality of seed (25–75 mm) and market (>75 mm) sized oysters along a salinity gradient over two years in Breton Sound, LA. In...
Effect of land cover and use on dry season river runoff, runoff efficiency, and peak storm runoff in the seasonal tropics of Central Panama
Fred L. Ogden, Trey D. Crouch, Robert F. Stallard, Jefferson S. Hall
2013, Water Resources Research (49) 8443-8462
A paired catchment methodology was used with more than 3 years of data to test whether forests increase base flow in the dry season, despite reduced annual runoff caused by evapotranspiration (the “sponge-effect hypothesis”), and whether forests reduce maximum runoff rates and totals during storms. The three study catchments were:...
Evidence of Hybridization between Common Gartersnakes (Thamnophis sirtalis) and Butler’s Gartersnakes (Thamnophis butleri) in Wisconsin (USA).
Joshua M. Kapfer, Brian L. Sloss, Gregor W. Schuurman, Rori A. Paloski, Jeffrey M. Lorch
2013, Journal of Herpetology (47) 400-405
Snakes within the genus Thamnophis (Gartersnakes and Ribbonsnakes) are often found in sympatry throughout their geographic distributions. Past work has indicated that some sympatric species within this genus may hybridize, but research of this nature is limited. We attempted to determine whether hybridization occurs between two Thamnophis species native to the upper midwestern United...
An approach for characterizing the distribution of shrubland ecosystem components as continuous fields as part of NLCD
George Z. Xian, Collin G. Homer, Debbie Meyer, Brian J. Granneman
2013, ISPRS Journal of Photogrammetry and Remote Sensing (86) 136-149
Characterizing and quantifying distributions of shrubland ecosystem components is one of the major challenges for monitoring shrubland vegetation cover change across the United States. A new approach has been developed to quantify shrubland components as fractional products within National Land Cover Database (NLCD). This approach uses remote sensing data and...
Mineral resource of the month: Phosphate rock
Stephen M. Jasinski
2013, Earth (December 2013)
As a mineral resource, “phosphate rock” is defined as unprocessed ore and processed concentrates that contain some form of apatite, a group of calcium phosphate minerals that is the primary source for phosphorus in phosphate fertilizers, which are vital to agriculture....
Regional assessment of North America: Urbanization trends, biodiversity patterns, and ecosystem services
Timon McPhearson, Roger F. Auch, Marina Alberti
2013, Book chapter, Urbanization, biodiversity and ecosystem services: Challenges and opportunities
North America contains some of the most urbanized landscapes in the world. In the United States (U.S.) and Canada, approximately 80 % of the population is urban, with Mexico slightly less (Kaiser Family Foundation 2013). Population growth combined with economic growth has fueled recent urban land expansion in North America....
Next generation of global land cover characterization, mapping, and monitoring
Chandra Giri, Bruce Pengra, J. Long, Thomas R. Loveland
2013, International Journal of Applied Earth Observation and Geoinformation (25) 30-37
Land cover change is increasingly affecting the biophysics, biogeochemistry, and biogeography of the Earth's surface and the atmosphere, with far-reaching consequences to human well-being. However, our scientific understanding of the distribution and dynamics of land cover and land cover change (LCLCC) is limited. Previous global land cover assessments performed using...
Using landscape epidemiological models to understand the distribution of chronic wasting disease in the Midwestern USA
Stacie J. Robinson, Michael D. Samuel, Robert E. Rolley, Paul Shelton
2013, Landscape Ecology (28) 1923-1935
Animal movement across the landscape plays a critical role in the ecology of infectious wildlife diseases. Dispersing animals can spread pathogens between infected areas and naïve populations. While tracking free-ranging animals over the geographic scales relevant to landscape-level disease management is challenging, landscape features that influence gene flow among wildlife...
The suitability of a simplified isotope-balance approach to quantify transient groundwater-lake interactions over a decade with climatic extremes
Laura A. Sacks, Terrie M. Lee, Amy Swancar
2013, Journal of Hydrology (519) 3042-3053
Groundwater inflow to a subtropical seepage lake was estimated using a transient isotope-balance approach for a decade (2001–2011) with wet and dry climatic extremes. Lake water δ18O ranged from +0.80 to +3.48 ‰, reflecting the 4 m range in stage. The transient δ18O analysis discerned large differences in semiannual groundwater...
Limited denitrification in glacial deposit aquifers having thick unsaturated zones (Long Island, USA)
Caitlin Young, Kevin D. Kroeger, Gilbert Hanson
2013, Hydrogeology Journal (21) 1773-1786
The goal of this study was to demonstrate how the extent of denitrification, which is indirectly related to dissolved organ carbon and directly related to oxygen concentrations, can also be linked to unsaturated-zone thickness, a mappable aquifer property. Groundwater from public supply and monitoring wells in Northport on Long Island,...
In situ spectrophotometric measurement of dissolved inorganic carbon in seawater
Xuewu Liua, Robert H. Byrne, Lori Adornato, Kimberly K. Yates, Eric Kaltenbacher, Xiaoling Ding, Bo Yang
2013, Environmental Science & Technology (47) 11106-11114
Autonomous in situ sensors are needed to document the effects of today’s rapid ocean uptake of atmospheric carbon dioxide (e.g., ocean acidification). General environmental conditions (e.g., biofouling, turbidity) and carbon-specific conditions (e.g., wide diel variations) present significant challenges to acquiring long-term measurements of dissolved inorganic carbon (DIC) with satisfactory accuracy...
A small-diameter NMR logging tool for groundwater investigations
David Walsh, Peter Turner, Elliot Grunewald, Hong Zhang, James J. Butler Jr., Ed Reboulet, Steve Knobbe, Tom Christy, John W. Lane Jr., Carole D. Johnson, Tim Munday, Andrew Fitzpatrick
2013, Groundwater (51) 914-926
A small-diameter nuclear magnetic resonance (NMR) logging tool has been developed and field tested at various sites in the United States and Australia. A novel design approach has produced relatively inexpensive, small-diameter probes that can be run in open or PVC-cased boreholes as small as 2 inches in diameter. The...