Dual resistance to Flavobacterium psychrophilum and Myxobolus cerebralis in rainbow trout (Oncorhynchus mykiss, Walbaum)
Brian W. Avila, Dana L. Winkelman, Eric R. Fetherman
2022, Journal of Fish Diseases (45) 801-813
Aquatic pathogens are a major concern for fish hatchery production, fisheries management, and conservation, and disease control needs to be addressed. Two important salmonid pathogens are Myxobolus cerebralis and Flavobacterium psychrophilum that cause whirling disease and bacterial coldwater disease (BCWD), respectively. Innate disease resistance is a potential option for...
Significance of U-Pb detrital zircon geochronology for mudstone provenance
Paul Sylvester, Amanda Souders, Rui Liu
2022, Geology (50) 670-675
Detrital zircon U-Pb studies of mudstone provenance are rare but may preferentially fingerprint distal zircon sources. To examine this issue, Pierre Shale and Trinidad Sandstone deposited in a Late Cretaceous deltaic environment in the Raton Basin, Colorado (USA), were measured for detrital zircon U-Pb age by laser ablation–inductively coupled plasma–mass...
The cost of avoiding predators: A bioenergetic analysis of diel vertical migration by the opossum shrimp Mysis diluviana
Steven R. Chipps, David H. Bennett, David Deslauriers, Lars G. Rudstam
2022, Hydrobiologia (849) 1871-1884
The freshwater opossum shrimp Mysis diluviana can undergo extensive diel vertical migration (DVM) to feed in shallow, prey rich strata at night. Bright moonlight limits their night-time migration presumably due to predator avoidance. Using a linked, foraging-bioenergetics model, we evaluated the cost of avoiding predators by simulating the effects of prey density, water temperature, and...
Draft genome sequence of a novel calicivirus from a brown bullhead (Ameiurus nebulosus) from Lake Memphremagog, Vermont/Quebec
Luke R. Iwanowicz, Vicki S. Blazer, Tom Jones, Matthew Bodnar, Korin Ekholm, Julie Dragon, Peter Emmerson
2022, Microbiology Resource Announcements (11)
We report a draft genome sequence of a previously undescribed calicivirus from a single brown bullhead inhabiting Lake Memphremagog, Vermont/Quebec. The genome is 7,413 nucleotides long and is most similar to the Atlantic salmon calicivirus (nucleotide identity; 64.7%)....
Survival of white-tailed deer fawns on Marine Corps Base Quantico
Gisele R. Aubin, Christa C. Nye, John H. Rohm, R.T. Stamps, W. Mark Ford, Michael J. Cherry
2022, The Journal of Wildlife Management (86)
Some jurisdictions in the eastern United States have reduced harvest of white-tailed deer (Odocoileus virginianus) because of perceived declines in recruitment and population size over the last decade. Although the restoration of American black bears (Ursus americanus) and the colonization of coyotes (Canis latrans) have increased fawn predation in some...
Landslides in Minnesota
Stephen B. DeLong, Carrie E. Jennings, Karen B. Gran
2022, Fact Sheet 2022-3007
Landslides in Minnesota have caused loss of life, damaged infrastructure, and negatively affected Minnesota’s natural resources. Landslides increase the amount of sediment contributed to lakes and rivers, with negative consequences for water quality and aquatic habitats. Recent mapping reveals that landslide susceptible areas within Minnesota primarily occur on steep slopes...
Multi-scale patterns in occurrence of an ephemeral pool-breeding amphibian
Brian J. Halstead, Jonathan P. Rose, Denise Clark, Patrick M. Kleeman, Robert N. Fisher
2022, Ecosphere (13)
Species distributions are governed by processes occurring at multiple spatial scales. For species with complex life cycles, the needs of all life stages must be met within the dispersal limitations of the species. Multi-scale processes can be particularly important for these species, where small-scale patterns in specific habitat components can...
Comparison of electrofishing and PIT antennas for detection of hatchery-reared Roundtail Chub (Gila robusta) stocked into a desert stream
Laura A. Tennant, David Ward, Alice C. Gibb
2022, Journal of the Arizona-Nevada Academy of Science (49) 116-126
Stocking of rare native fishes for conservation purposes is a common practice in the southwestern United States. Monitoring typically occurs after hatchery-reared fish are released to assess post-stocking movement and survival. We conducted a two-year study, in which tow-barge electrofishing and portable, flat-bed passive integrated transponder (PIT) antennas...
Deep learning detection and recognition of spot elevations on historic topographic maps
Samantha Arundel, Trenton P. Morgan, Philip T. Thiem
Yao-Yi Chiang, editor(s)
2022, Frontiers in Environmental Science (10) 1-10
Some information contained in historical topographic maps has yet to be captured digitally, which limits the ability to automatically query such data. For example, U.S. Geological Survey’s historical topographic map collection (HTMC) displays millions of spot elevations at locations that were carefully chosen to best represent the terrain at the...
Warming in the upper San Francisco Estuary: Patterns of water temperature change from five decades of data
Samuel M. Bashevkin, Brian Mahardja, Larry R. Brown
2022, Limnology and Oceanography (67) 1065-1080
Temperature is a key controlling variable from subcellular to ecosystem scales. Thus, climatic warming is expected to have broad impacts, especially in economically and ecologically valuable systems such as estuaries. The heavily managed upper San Francisco Estuary supplies water to millions of people and is home...
Multiple UAV flights across the growing season can characterize fine scale phenological heterogeneity within and among vegetation functional groups
David J. A. Wood, Todd M. Preston, Scott Powell, Paul C. Stoy
2022, Remote Sensing (14)
Grasslands and shrublands exhibit pronounced spatial and temporal variability in structure and function with differences in phenology that can be difficult to observe. Unpiloted aerial vehicles (UAVs) can measure vegetation spectral patterns relatively cheaply and repeatably at fine spatial resolution. We tested the ability of UAVs to measure phenological variability...
Shallow faulting and folding in the epicentral area of the 1886 Charleston, South Carolina, earthquake
Thomas L. Pratt, Anjana K. Shah, R.C Counts, J. Wright Horton, Jr., M.C. Chapman
2022, Bulletin of the Seismological Society of America (112) 2097-2123
The moment magnitude (Mw">Mw�w) ∼7 earthquake that struck Charleston, South Carolina, on 31 August 1886 is the largest historical earthquake in the United States east of the Appalachian Mountains. The fault(s)...
The effects of discharge and bank orientation on the annual riverbank erosion along Powder River in Montana, USA
John A. Moody
2022, Geomorphology (403)
Annual bank erosion was measured at multiple cross sections along the free-flowing meandering Powder River in the western United States from 1979 through 2019. Bank erosion was separated into two components—above water and underwater erosion. Above water erosion was measured as the annual bank retreat rate (0–15.4 m y−1). Underwater erosion rate (0–47 m3 m−1 y−1) was calculated...
Many avenues for spatial personality research: a response to comments on Stuber et al. (2022)
Erica Francis Stuber, Ben Carlson, Brett Jesmer
2022, Behavioral Ecology (33) 492-493
We are grateful for the thought-provoking and forward-looking commentaries (Dingemanse et al. 2022; Mabry 2022; Spiegel and Pinter-Wollman 2022; Vander...
Leveraging rangeland monitoring data for wildlife: From concept to practice
David S. Pilliod, Jeffrey L. Beck, Courtney Jean Duchardt, Janet L. Rachlow, Kari E. Veblen
2022, Rangelands (44) 87-98
Available rangeland data, from field-measured plots to remotely sensed landscapes, provide much needed information for mapping and modeling wildlife habitats.Better integration of wildlife habitat characteristics into rangeland monitoring schemes is needed for most rangeland wildlife species at varying spatial and temporal scales.Here, we aim to stimulate use of and inspire...
Power analysis for detecting the effects of best management practices on reducing nitrogen and phosphorus fluxes to the Chesapeake Bay watershed, USA
Paul McLaughlin, Richard Alexander, Joel D. Blomquist, Olivia H. Devereux, Gregory E. Noe, Tyler Wagner, Kelly L. Smalling
2022, Ecological Indicators (136) 1-12
In 2010 the U.S. Environmental Protection Agency established the Total Maximum Daily Load (TMDL) which is a “pollution diet” that aims to reduce the amount of nitrogen and phosphorus entering the Chesapeake Bay, the largest estuary in the United States, by 25 and 24% percent, respectively. To achieve this goal...
Early Neoproterozoic gold deposits of the Alto Guaporé province, southwestern Amazon craton, western Brazil
Rodrigo Prudente de Melo, Marcos Aurelio Farias de Oliveira, Richard J. Goldfarb, Craig A. Johnson, Erin E. Marsh, Roberto Perez Xavier, Leandro Rocha de Oliveira, Leah E. Morgan
2022, Economic Geology (117) 127-163
The Alto Guaporé gold province, southwestern Amazon craton, contains gold deposits that have been mined since the beginning of the 18th century and these deposits, together, have modern-day, pre-mining gold resources of at least 1.8 Moz. The ore is associated with quartz vein systems along the southeastern part of the...
Adaptive monitoring in support of adaptive management in rangelands
Sarah E. McCord, David S. Pilliod
2022, Rangelands (44) 1-7
Monitoring supports iterative learning about the effectiveness of management actions, information that can help managers plan future actions, facilitate decision-making, and improve outcomes.Adaptive monitoring is the evolution of a monitoring program in response to new management questions; new or changing environmental or socioeconomic conditions, improved monitoring methods, models, and...
Evidence of a dietary shift by the Florida manatee (Trichechus manatus latirostris) in the Indian River Lagoon inferred from stomach content analyses
Aarin Conrad Allen, Cathy Beck, Danielle C. Sattelberger, Jeremy J. Kiszka
2022, Estuarine, Coastal and Shelf Science (268)
Investigating the long-term fluctuations of the feeding ecology of megaherbivores such as sirenians is important, as any changes could be indicative of shifts in resource availability. The Indian River Lagoon (IRL), eastern Florida, USA, is a critical habitat for the Florida manatee (Trichechus manatus latirostris). However, the IRL has experienced a substantial decline in seagrass due...
Stage-specific environmental correlates of reproductive success in Boreal Toads (Anaxyrus boreas boreas)
Gabriel M. Barrile, Annika W. Walters, Anna D. Chalfoun
2022, Journal of Herpetology (56) 34-44
Compensatory recruitment can facilitate the persistence of populations experiencing high adult mortality. Because early life-stages of many taxa, including amphibians, are difficult to mark and recapture, sources of variation in survival at these stages often are unknown, which creates barriers to improving in situ...
Chenier Plain region bathymetric and topographic datasets: Methodology report
James G. Flocks, Arnell S. Forde, Julie Bernier
2022, Open-File Report 2022-1014
The goal of the Louisiana Barrier Island Comprehensive Monitoring (BICM) program is to provide long-term data on coastal Louisiana for monitoring change and assisting in coastal management. This study (carried out under Coastal Protection and Restoration Authority contract number 2000339324, BICM2—Chenier TopoBathy DEM) builds upon the previous BICM physical assessment...
How low should we alert? Quantifying intensity threshold alerting strategies for earthquake early warning in the United States
Jessie Kate Saunders, Sarah E. Minson, Annemarie S. Baltay Sundstrom
2022, Earth's Future (10)
We use a suite of historical earthquakes to quantitatively determine earthquake early warning (EEW) alert threshold strategies for a range of shaking intensity targets for EEW in the U.S. West Coast. The current method for calculating alert regions for the ShakeAlert EEW System does not take into account variabilities and...
Identifying factors linked with persistence of reintroduced populations: Lessons learned from 25 years of amphibian translocations
Blake R. Hossack, Paige E. Howell, Audrey K Owens, C Cobos, Caren S. Goldberg, David L. Hall, Shaula Hedwall, Susi MacVean, Magnus McCaffery, A. Hunter McCall, C Mosley, Emily Bea Oja, James C. Rorabaugh, Brent H. Sigafus, Michael J Sredl
2022, Global Ecology and Conservation (35)
Conservation translocations are increasingly used to help recover imperiled species. However, success of establishing populations remains low, especially for amphibians. Identifying factors associated with translocation success can help increase efficiency and efficacy of recovery efforts. Since the 1990s, several captive and semi-captive facilities have produced Chiricahua Leopard Frogs (Rana chiricahuensis) to...
Documentation for the Skeletal Storage, Compaction, and Subsidence (CSUB) Package of MODFLOW 6
Joseph D. Hughes, Stanley A. Leake, Devin L. Galloway, Jeremy T. White
2022, Techniques and Methods 6-A62
This report describes the skeletal storage, compaction and subsidence (CSUB) package of MODFLOW 6. The CSUB package simulates the vertical compaction of compressible sediments and land subsidence. The package simulates groundwater storage changes and elastic compaction in coarse-grained aquifer sediments. The CSUB package also simulates groundwater storage changes and elastic...
Documentation for the MODFLOW 6 Groundwater Transport Model
Christian D. Langevin, Alden M. Provost, Sorab Panday, Joseph D. Hughes
2022, Techniques and Methods 6-A61
This report documents a new Groundwater Transport (GWT) Model for MODFLOW 6. The GWT Model simulates three-dimensional transport of a single chemical species in fowing groundwater based on a generalized control-volume fnite-difference approach. Although each GWT Model is only able to represent a single chemical species, multiple GWT Models may...