Conterminous United States land-cover change (1985-2016): New insights from annual time series
Roger F. Auch, Danika Fay Wellington, Janis L. Taylor, Stephen V. Stehman, Heather J. Tollerud, Jesslyn F. Brown, Thomas Loveland, Bruce Pengra, Josephine Horton, Zhe Zhu, Alemayehu Midekisa, Kristi Sayler, George Z. Xian, Christopher Barnes, Ryan R. Reker
2022, Land (11)
Sample-based estimates augmented by complete coverage land-cover maps were used to estimate area and describe patterns of annual land-cover change across the conterminous United States (CONUS) between 1985 and 2016. Most of the CONUS land cover remained stable in terms of net class change over this time,...
Rocky Mountain Region Science Exchange 2020—EarthMAP and the Colorado River Basin
Anne C. Tillery, Patrick J. Anderson, William J. Andrews, Katharine Dahm, Seth S. Haines, Robert Horton, David O’Leary, Ryan D. Taylor, Kathryn A. Thomas, Alicia A. Torregrosa
2022, Circular 1483
The U.S. Geological Survey (USGS) Rocky Mountain Region (RMR) hosted USGS scientists, managers, program coordinators, and leadership team members for a virtual Science Exchange during September 15–17, 2020. The Science Exchange had 216 registered participants and included 48 talks over the 3-day period. Invited speakers presented information about the novel...
Effects of seasonal hypoxia on macroinvertebrate communities in a small reservoir
David O. Lucchesi, Steven R. Chipps, David A. Schumann
2022, Lakes & Reservoirs (37)
Localized hypoxia can reduce available habitat, restrict movement and limit the abundance of aquatic invertebrates. Cultural eutrophication coupled with the effects of climate change is likely to increase the frequency and extent of hypoxia in aquatic ecosystems, yet little is known about how oxygen gradients in small reservoirs influence spatial...
Hydrologic modification and channel evolution degrades connectivity on the Atchafalaya River floodplain
Daniel Kroes, Charles R Demas, Yvonne A. Allen, Richard Day, Steve W Roberts, Jeff Varisco
2022, Earth Surface Processes and Landforms (47) 1790-1807
The Atchafalaya River Basin is the largest remaining forested wetland in the contiguous United States. Since 1960, dredging and channel erosion in the Basin have resulted in changes to the hydrologic connectivity that have not been quantified. Analyses were conducted to determine the hydraulic and geomorphic factors that have changed...
Premature mortality observations among Alaska’s Pacific salmon during record heat and drought in 2019
Vanessa R. von Biela, Christopher J. Sergeant, Michael P. Carey, Zachary Liller, Charles M. Russell, Stephanie Quinn-Davidson, Peter S. Rand, P. A. H. Westley, Christian E. Zimmerman
2022, Fisheries (47) 157-168
Widespread mortality of Pacific salmon Oncorhynchus spp. returning to spawn in Alaska coincided with record-breaking air temperatures and prolonged drought in summer 2019. Extreme environmental conditions are expected to happen more frequently with rapid climate change and challenge the notion that Alaska could indefinitely provide abundant, cool freshwater habitat for Pacific salmon....
Potential effects of climate change on snail kites (Rostrhamus sociabilis plumbeus) in Florida
Marta P. Lyons, Olivia E. LeDee, Ryan Boyles
2022, Open-File Report 2021-1104-A
The snail kite (Rostrhamus sociabilis plumbeus), an endangered, wetland-dependent raptor, is highly sensitive to changes in hydrology. Climate-driven changes in water level will likely affect snail kite populations—altering reproductive success and survival rates. Identifying the mechanisms mediating the direct and indirect effects of climate on snail kite populations and the...
Effects of climate change on fish and wildlife species in the United States
2022, Open-File Report 2021-1104
About this volumeThis U.S. Geological Survey Open-File Report provides brief syntheses of the direct and indirect effects of climate change to priority species and ecosystems in the United States. Each chapter focuses on <span class="NormalTextRun SCXW199727287...
Molecular mechanisms of solid bitumen and vitrinite reflectance suppression explored using hydrous pyrolysis of artificial source rock
Margaret M. Sanders, Aaron M. Jubb, Paul C. Hackley, Kenneth E. Peters
2022, Organic Geochemistry (165)
The most commonly used parameter for thermal maturity calibration in basin modelling is mean random vitrinite reflectance (Ro). However, Ro suppression has been noted in samples containing a high proportion of liptinite macerals. This phenomenon has been demonstrated empirically using hydrous...
Integration of vegetation classification with land cover mapping: Lessons from regional mapping efforts in the Americas
Patrick J. Comer, Jon C Hak, Daryn Dockter, Jim Smith
2022, Vegetation Classification and Survey 29-43
Aims: Natural resource management and biodiversity conservation rely on inventories of vegetation that span multiple management or political jurisdictions. However, while remote sensing data and analytical tools have enabled production of maps at increasing spatial resolution and reliability, there are limited examples where national or continental-scaled maps are produced to...
High abundance of a single taxon (amphipods) predicts aquatic macrophyte biodiversity in prairie wetlands
Danelle M. Larson, Demmey DeJong, Michael J. Anteau, Megan J. Fitzpatrick, Breanna R. Keith, Emily G. Schilling, Barry Thoele
2022, Conservation Biology (31) 1073-1093
Conservation programs often aim to protect the abundance of individual species and biodiversity simultaneously. We quantified relations between amphipod densities and aquatic macrophyte (large plants and algae) diversity to test a hypothesis that biodiversity can support high abundance of a single taxonomic group. Amphipods (Gammarus lacustris and Hyalella...
Genetic assignment of fisheries bycatch reveals disproportionate mortality among Alaska Northern Fulmar breeding colonies
Diana S. Baetscher, Jessie Beck, Eric C. Anderson, Kristen Ruegg, Andrew M. Ramey, Scott Hatch, HannahRose M. Nevins, Shannon Fitzgerald, J Carlos Garza
2022, Evolutionary Applications (15) 447-458
Global fisheries kill millions of seabirds annually through bycatch, but little is known about population-level impacts, particularly in species that form metapopulations. U.S. North Pacific groundfish fisheries catch thousands of Northern Fulmars (Fulmarus glacialis rodgersii) each year, making fulmars the most frequently caught seabird in federally...
Fishway Entrance Palisade
Kevin Mulligan, Richard Palmer, Brett Towler, Alexander Haro, Bjorn Lake, Marcia Rojas, Elizabeth Lotter
2022, Report
This technical report summarizes the work that was conducted by the University of Massachusetts Amherst and the United States Geological Survey (USGS), along with other project partners, on the Fishway Entrance Palisade (EP), a projected funded through the Department of Energy’s (DOE) funding opportunity titled ‘Innovative Solutions for Fish Passage...
A statistical framework for integrating nonparametric proxy distributions into geological reconstructions of relative sea level
Erica L. Ashe, Nicole S. Khan, Lauren Toth, Andrea Dutton, Robert E. Kopp
2022, Advances in Statistical Climatology, Meteorology and Oceanography (8) 1-29
Robust, proxy-based reconstructions of relative sea-level (RSL) change are critical to distinguishing the processes that drive spatial and temporal sea-level variability. The relationships between individual proxies and RSL can be complex and are often poorly represented by traditional methods that assume Gaussian likelihood distributions. We develop a new statistical framework...
Three Mw ≥ 4.7 earthquakes within the Changning (China) shale gas field ruptured shallow faults intersecting with hydraulic fracturing wells
Shuai Wang, Guoyan Jiang, Xinglin Lei, Andrew J. Barbour, Xibin Tan, Caijun Xu, Xiwei Xu
2022, Journal of Geophysical Research B: Solid Earth (127)
From 2017 to 2019, three destructive earthquakes (27 January 2017 Mw 4.7, 16 December 2018 Mw 5.2, and 3 January 2019 Mw 4.8) occurred in the Changning shale gas field in the southwest Sichuan Basin, China. Previous seismological studies attributed these events to hydraulic fracturing (HF), but were unable to...
Fast rupture of the 2009 Mw 6.9 Canal de Ballenas earthquake in the Gulf of California dynamically triggers seismicity in California
Wenyuan Fan, Ryo Okuwaki, Andrew J. Barbour, Yihe Huang, Guoqing Lin, Elizabeth S. Cochran
2022, Geophysical Journal International (230) 528-541
In the Gulf of California, Mexico, the relative motion across the North America-Pacific boundary is accommodated by a series of marine transform faults and spreading centers. About 40 M>6 earthquakes have occurred in the region since 1960. On 3 August 2009, an Mw 6.9 earthquake occurred near Canal de Ballenas...
Experimental evaluation of predator exclosures on nest, chick, and adult survival of piping plovers
Michael J. Anteau, Rose J. Swift, Mark H. Sherfy, David N. Koons, Kristen S. Ellis, Terry L. Shaffer, Dustin L. Toy, Megan M. Ring
2022, Journal of Wildlife Management (86) 1-21
Species of conservation concern often receive intensive management to improve vital rates and facilitate recovery. Piping plovers (Charadrius melodus) are federally listed in the United States and concerns over nest depredation have prompted widespread use of plover-permeable predator exclosures placed around nests (0.5–2-m radius). While effectiveness of exclosures for improving...
NWTOPT — A hyperparameter optimization approach for selection of environmental model solver settings
Max William Newcomer, Randall J. Hunt
2022, Environmental Modelling and Software (147) 1-7
Hyperparameter optimization approaches were applied to improve performance and accuracy of groundwater flow models. Freely available new software, NWTOPT, is described that uses Tree of Parzen Estimators (TPE) and Random Search algorithms to optimize MODFLOW-NWTs solver settings. We ran 3500 trials on a steady-state and transient model. To quantify the...
Light and flow regimes regulate the metabolism of rivers
Emily. S Bernhardt, Philip Savoy, Michael J Vlah, Alison Paige Appling, Lauren E Koenig, Robert O Hall Jr., Maite Arroita, Joanna Blaszczak, Alice M. Carter, Matthew J. Cohen, Judson Harvey, James B. Heffernan, Ashley M. Helton, J.D. Hosen, Lily Kirk, William H. McDowell, Emily H. Stanley, Charles Yackulic, Nancy B. Grimm
2022, Proceedings of the National Academy of Sciences (119)
Mean annual temperature and mean annual precipitation drive much of the variation in productivity across Earth's terrestrial ecosystems but do not explain variation in gross primary productivity (GPP) or ecosystem respiration (ER) in flowing waters. We document substantial variation in the magnitude and seasonality of GPP and ER across 222...
Smoothed Particle Hydrodynamics simulations of reef surf zone processes driven by plunging irregular waves
Ryan J. Lowe, C. Altomare, Mark L. Buckley, Renan F. da Silva, Jeff E. Hansen, Dirk P. Rijnsdorp, J.M. Dominguez, A.J.C. Crespo
2022, Ocean Modelling (171)
As waves interact with the slopes of coral reefs and other steep bathymetry profiles, plunging breaking usually occurs where the free surface overturns and violent water motion is triggered. Resolving these surf zone processes pose significant challenges for conventional mesh-based hydrodynamic models, due to the rapidly-deforming nature of...
Immunological evidence of variation in exposure and immune response to Bacillus anthracis in herbivores of Kruger and Etosha National Parks
Sunday O. Ochai, Jan E. Crafford, Ayesha Hassim, Charles Byaruhanga, Yen-Hua Huang, Axel Hartmann, Edgar H. Dekker, O. Louis van Schalkwyk, Pauline L. Kamath, Wendy Christine Turner, Henriette van Heerden
2022, Frontiers in Immunology (13)
Exposure and immunity to generalist pathogens differ among host species and vary across spatial scales. Anthrax, caused by a multi-host bacterial pathogen, Bacillus anthracis, is enzootic in Kruger National Park (KNP), South Africa and Etosha National Park (ENP), Namibia. These parks share many of the same potential host species, yet the...
Observation-constrained multicycle dynamic models of the southern San Andreas and the northern San Jacinto Faults: Addressing complexity in paleoearthquake extent and recurrence with realistic 2D fault geometry
Dunyu Liu, Benchuan Duan, Katherine M. Scharer, Doug Yule
2022, JGR Solid Earth (127)
Understanding mechanical conditions that lead to complexity in earthquakes is important to seismic hazard analysis. In this study, we simulate physics-based multicycle dynamic models of the San Andreas fault (Carrizo through San Bernardino sections) and the San Jacinto fault (Claremont and Clark strands). We focus on a complex fault geometry...
Trends in volcano seismology: 2010 to 2020 and beyond
Weston Thelen, Robin Matoza, Alicia J. Hotovec-Ellis
2022, Bulletin of Volcanology (84)
Volcano seismology has been fundamental to our current understanding of crustal magma migration and eruption. The increasing availability of portable seismic networks with the creative use of seismic sources and ambient noise has led to a better understanding of the volcanic structure of many volcanoes and is producing increasingly detailed...
Parcel-level risk affects wildfire outcomes: Insights from pre-fire rapid assessment data for homes destroyed in 2020 East Troublesome Fire
James Meldrum, Christopher M. Barth, Julia B. Goolsby, Schelly K. Olson, Adam C. Gosey, James (Brad) White, Hannah Brenkert-Smith, Patricia A. Champ, Jamie Gomez
2022, Fire (5)
Parcel-level risk (PLR) describes how wildfire risk varies from home to home based on characteristics that relate to likely fire behavior, the susceptibility of homes to fire, and the ability of firefighters to safely access properties. Here, we describe the WiRē Rapid Assessment (RA), a parcel-level rapid...
Novel genome characteristics contribute to the invasiveness of Phragmites australis (common reed)
Dong-Ha Oh, Kurt P. Kowalski, Quynh Quach, Chathura Wijesinghege, Philippa Tanford, Maheshi Dassanayake, Keith Clay
2022, Molecular Ecology (31) 1142-1159
The rapid invasion of the non-native Phragmites australis (Poaceae, subfamily Arundinoideae) is a major threat to native wetland ecosystems in North America and elsewhere. We describe the first reference genome for P. australis and compare invasive (ssp. australis) and native (ssp. americanus) genotypes collected from replicated populations across the Laurentian Great Lakes to deduce genomic bases driving...
Epidemiological differences between sexes affect management efficacy in simulated chronic wasting disease systems
William J. Rogers, Ellen E. Brandell, Paul C. Cross
Hamish McCallum, editor(s)
2022, Journal of Applied Ecology (59) 1122-1133
Sex-based differences in physiology, behaviour and demography commonly result in differences in disease prevalence. However, sex differences in prevalence may reflect exposure rather than transmission, which could affect disease control programmes. One potential example is chronic wasting disease (CWD), which has been observed at greater prevalence among male than...