Establishing the foundation for the global observing system for marine life
Erin V. Satterthwaite, Nicholas J. Bax, Patricia Miloslavich, Lavenia Ratnarajah, Gabrielle Canonico, Daniel Dunn, Samantha E. Simmons, Roxanne J. Carini, Karen Evans, Valerie Allain, Ward Appeltans, Sonia Batten, Lisandro Benedetti-Cecchi, Anthony T. F. Bernard, R. Sky Bristol, Abigail Benson, Pier Luigi Buttigieg, Leopoldo Cavaleri Gerhardinger, Sanae Chiba, Tammy E. Davies, J. Emmett Duffy, Alfredo Giron-Nava, Astrid J. Hsu, Alexandra C. Kraberg, Raphael M. Kudela, Dan Lear, Enrique Montes, Frank Muller-Karger, Todd D. O'Brien, David Obura, Pieter Provoost, Sara Pruckner, Lisa-Maria Rebelo, Elizabeth R. Selig, Olav Sigurd Kjesbu, Craig Starger, Rick D. Stuart-Smith, Marjo Vierros, John S. Waller, Lauren V. Weatherdon, Tristan Wellman, Anna Zivian
2021, Frontiers in Marine Science (8)
Maintaining healthy, productive ecosystems in the face of pervasive and accelerating human impacts including climate change requires globally coordinated and sustained observations of marine biodiversity. Global coordination is predicated on an understanding of the scope and capacity of existing monitoring programs, and the extent to which they use standardized, interoperable...
Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations
Mohammad Salehi, David R. Smith
2021, PLoS ONE (16)
Sampling rare and clustered populations is challenging because of the effort required to find rare units. Heuristically, a practitioner would prefer to discontinue sampling in areas where rare units of interest are apparently extremely sparse or absent. We take advantage of the characteristics of inverse sampling...
Recovery and analysis of ancient beetle DNA from subfossil packrat middens using high-throughput sequencing
Aaron D. Smith, Marcin J. Kaminski, Kojun Kanda, Andrew D. Sweet, Julio L. Betancourt, Camille A. Holmgren, Elisabeth Hempel, Federica Alberti, Michael Hofreiter
2021, Scientific Reports (11)
The study of ancient DNA is revolutionizing our understanding of paleo-ecology and the evolutionary history of species. Insects are essential components in many ecosystems and constitute the most diverse group of animals. Yet they are largely neglected in ancient DNA studies. We report the results of...
Decision analysis of barrier placement and targeted removal to control invasive carp in the Tennessee River Basin
Max Post van der Burg, David R. Smith, Aaron R. Cupp, Mark W. Rogers, Duane Chapman
2021, Open-File Report 2021-1068
Controlling range expansion of invasive carp (specifically Hypophthalmichthys spp.) on the Tennessee River is important to conserve the ecological and economic benefits provided by the river. We collaborated with State and Federal agencies (the stakeholder group) to develop a decision framework and decision support model to evaluate strategies to control...
Impacts of sediment removal from and placement in coastal barrier island systems
Jennifer L. Miselis, James G. Flocks, Sara Zeigler, Davina Passeri, David R. Smith, Jill Bourque, Christopher R. Sherwood, Christopher G. Smith, Daniel J. Ciarletta, Kathryn Smith, Kristen Hart, David C. Kazyak, Alicia Berlin, Bianca Prohaska, Teresa Calleson, Kristi Yanchis
2021, Open-File Report 2021-1062
Executive SummaryOn June 24, 2019, Congressman Raul Grijalva of Arizona, Chair of the House Committee on Natural Resources, sent a letter to the directors of the U.S. Fish and Wildlife Service and the U.S. Geological Survey to request their assistance in answering questions regarding coastal sediment resource management within the...
The contribution of land cover change to the decline of honey yields in the Northern Great Plains
David Smith, Amélie Y. Davis, Claudia Hitaj, Dan Hellerstein, Amanda Preslicka, Emma Kirkpatrick, David M. Mushet, Eric Lonsdorf
2021, Environmental Research Letters (16)
Decreased availability of forage, as well as increased pesticide exposure, are important factors in the decline of honey bee health. Here, we isolate land cover transitions and their effect on honey production at 160 commercial apiaries in the Northern Great Plains. We found that land cover changes from 2008 to...
Hydraulic characterization of carbonate-rock and basin-fill aquifers near Long Canyon, Goshute Valley, northeastern Nevada
C. Amanda Garcia, Keith J. Halford, Philip M. Gardner, David W. Smith
2021, Scientific Investigations Report 2021-5021
Understanding groundwater flow and pumping effects near pending mining operations requires accurate subsurface hydraulic characterization. To improve conceptual models of groundwater flow and development in the complex hydrogeologic system near Long Canyon Mine, in northwestern Goshute Valley, northeastern Nevada, the U.S. Geological Survey characterized the hydraulic properties of carbonate...
Solar-system-wide significance of Mars polar science
I. B. Smith, Wendy M. Calvin, D. E. Smith, C. Hansen, S. Diniega, A.S. McEwen, N. Thomas, D. Banfield, Timothy N. Titus, P. Becerra, M. Kahre, F. Forget, M. Hecht, S. Byrne, C. S. Hvidberg, P. O. Hayne, J. W. Head III, M. Mellon, B. Horgan, J. Mustard, J. Holt, A. Howard, D. McCleese, C. Stoker, P. James, N. E. Putzig, J. Whitten, P. Buhler, A. Spiga, M. Crismani, K. M. Aye, A. Portyankina, R. Orosei, A. Bramson, J. Hanley, M. Sori, O. Aharonson, S. Clifford, H. Sizemore, G. Morgan, B. Hartmann, N. Schorghofer, R. Clark, D. Berman, D. Crown, F. Chuang, M. Siegler, E. N. Dobrea, K. Lynch, R. W. Obbard, M. R. Elmaary, D. Fisher, A. Kleinboehl, M. Balme, B. Schmitt, M. Daly, R. C. Ewing, Kenneth E. Herkenhoff, L. Fenton, S. D. Guzewich, M. Koutnik, J. Levy, R. Massey, A. Łosiak, V. Eke, D. Goldsby, A. Cross, T. Hager, S. Piqueux, A Kereszturi, K. Seelos, S. Wood, E. Hauber, C. Amos, P. Russell, R. Jaumann, G. Michael, S. Conway, A. Khayat, S. Lewis, G. Luizzi, G. Martinez, K. Mesick, L. Montabone, Johnsson, A. Pankine, C. Phillips-Lander, P. Read, Lauren A. Edgar, K. Zacny, A. McAdam, A. Rutledge, T. Bertrand, J. Widmer, D. Stillman, A. Soto, Z. Yoldi, R. Young, A. Svensson, L. Sam, M. Landis, A. Bhardwaj, M. Chojnacki, E. Kite, P. Thomas, J. Plaut, J. Bapst, S. Milkovich, J. Whiteway, J. Moores, C. Rezza, R. Karimova, I. Mishev, A. Van Brenen, P. Acharya, J. Chesal, A. Pascuzzo, E. Vos, G. Osinski, C. Andres, C. Neisch, S. Hibbard, P. Sinha, J. P. Knightly, S. Cartwright, S. Kounaves, C. Orgel, M. Skidmore, J. MacGregor, R. Staehle, J. Rabassa, C. Gallagher, A. Coronato, A. G. Galofre, J. Wilson, L. McKeown, N. Oliveira, P. Fawdon, U. Gayathri, C. Stuurman, C. Herny, F. Butcher, F. Bernardini, M. Perry, R. Hu, S. Mukherjee, V. Chevrier, M. E. Banks, T. Meng, P. A. Johnson, B. Tober, J. C. Johnson, Ulamsec, J. C. Echaurren, A. Khuller, C. Dinwiddie, S. Adeli, B. L. Henderson, L. R. Lozano, D. Lalich, E. Rivera-Valentín, S. Nerozzi, E. Petersen, F. Foss, R. Lorenz, J. Eigenbrode, M. Day, A. Brown, M. Pajola, O. Karatekin, A. Lucchetti, C. Cesar, C. Newman, T. G. Cave, M. Mischna, M. Patel, P. Streeter, J. C. Stern, C. M. Dundas
2021, Report, Planetary science and astrobiology decadal survey 2023-2032
1. The North Polar Layered Deposits contain thousands of ice layers that record accumulation and climate history for at least several million years, making the most accessible and most complete climate record aside from the Earth’s – and the only one to record the impact of large obliquity shifts. 2. Mars...
Range expansion and factors affecting abundance of invasive Flathead Catfish in the Delaware and Susquehanna Rivers, Pennsylvania, USA
Geoffrey D. Smith, Danielle L. Massie, Joseph Perillo, Tyler Wagner, Daryl Pierce
2021, North American Journal of Fisheries Management (41) S205-S220
Flathead Catfish Pylodictis olivaris have been either intentionally or accidentally introduced into Atlantic Slope drainages extending from Florida to Pennsylvania and have quickly become established. In Pennsylvania, Flathead Catfish were first detected in the Schuylkill River at the Fairmont Dam in 1999 and in the Susquehanna River at Safe Harbor Dam in...
Leveraging risk communication science across US federal agencies
William M. P. Klein, Alycia Boutte, Heather Brake, Madeline Beal, Katherine Lyon-Daniel, Emily Eisenhauer, Monica Grasso, Bryan Hubbell, Karen Jenni, Christopher Lauer, Arthur Lupia, Christine Prue, Paula Rausch, Carl D. Shapiro, Michael D. Smith, William Riley
2021, Nature Human Behavior (5) 411-413
Many US federal agencies apply principles from risk communication science across a wide variety of hazards. In so doing, they identify key research and practice gaps that, if addressed, could help better serve the nation’s communities and greatly enhance practice, research, and policy development....
Expected warning times from the ShakeAlert earthquake early warning system for earthquakes in the Pacific Northwest
Jeffrey J. McGuire, Deborah E. Smith, Arthur D. Frankel, Erin A. Wirth, Sara K. McBride, Robert M. de Groot
2021, Open-File Report 2021-1026
The ShakeAlert® earthquake early warning system has been live since October 2019 for the testing of public alerting to mobile devices in California and will soon begin testing this modality in Oregon and Washington. The Pacific Northwest presents new challenges and opportunities for ShakeAlert owing to the different types of...
The contribution of water radiolysis to marine sedimentary life
Justine F. Sauvage, Ashton F. Flinders, Arthur J. Spivack, Robert Pockalny, Ann G. Dunlea, Chloe H. Anderson, David Smith, Richard W. Murray, Steven D’Hondt
2021, Nature Communications (12)
Water radiolysis continuously produces H2 and oxidized chemicals in wet sediment and rock. Radiolytic H2 has been identified as the primary electron donor (food) for microorganisms in continental aquifers kilometers below Earth’s surface. Radiolytic products may also be significant for sustaining life in subseafloor sediment and subsurface environments...
Patterns and processes of pathogen exposure in gray wolves across North America
E. E. Brandell, Paul C. Cross, Meggan E. Craft, Douglas W. Smith, E. J. Dubovi, Marie L. J. Gilbertson, Tyler Wheeldon, John A. Stephenson, Shannon Barber-Meyer, B. L. Borg, Mathew Sorum, Daniel R. Stahler, Allicia P Kelly, Morgan Anderson, H. D. Cluff, Daniel R. MacNulty, David L. Watts, G. Roffler, Helen M. Schwantje, Mark Hebblewhite, K. Beckman, P. J. Hudson
2021, Scientific Reports (11) 3722
The presence of many pathogens varies in a predictable manner with latitude, with infections decreasing from the equator towards the poles. We investigated the geographic trends of pathogens infecting a widely distributed carnivore: the gray wolf (Canis lupus). Specifically, we investigated which variables best explain and predict geographic trends in...
A metapopulation model of social group dynamics and disease applied to Yellowstone wolves
Ellen E. Brandell, A P Dobson, Peter J. Hudson, Paul C. Cross, Douglas W. Smith
2021, Proceedings of the National Academy of Sciences (118)
The population structure of social species has important consequences for both their demography and transmission of their pathogens. We develop a metapopulation model that tracks two key components of a species’ social system: average group size and number of groups within a population. While the model...
Using expert knowledge to support Endangered Species Act decision‐making for data‐deficient species
Daniel Bruce Fitzgerald, David R. Smith, David C. Culver, Daniel Feller, Daniel W. Fong, Jeff Hajenga, Matthew L. Niemiller, Daniel C. Nolfi, Wil D. Orndorff, Barbara Douglas, Kelly O. Maloney, John A. Young
2021, Conservation Biology (35) 1627-1638
Many questions relevant to conservation decision making are characterized by extreme uncertainty due to lack of empirical data and complexity of the underlying ecological processes, leading to a rapid increase in the use of structured protocols to elicit expert knowledge. Published ecological applications often employ a modified Delphi method, where...
Snowpack signals in North American tree rings
Bethany L. Coulthard, Kevin J. Anchukaitis, Gregory T. Pederson, Edward R Cook, Jeremy Littell, Dan J. Smith
2021, Environmental Research Letters (16)
Climate change has contributed to recent declines in mountain snowpack and earlier runoff, which in turn has intensified hydrological droughts in western North America. Climate model projections suggest that continued and severe snowpack reductions are expected over the 21st century, with profound consequences for ecosystems and human welfare. Yet the...
The normal faulting 2020 Mw5.8 Lone Pine, Eastern California earthquake sequence
Egill Hauksson, Brian J. Olsen, Alex R. R. Grant, Jennifer R Andrews, Angela I. Chung, Susan E. Hough, Hiroo Kanamori, Sara McBride, Andrew J. Michael, Morgan T. Page, Zachary E. Ross, Deborah Smith, Sotiris Valkaniotis
2021, Seismological Research Letters (92) 679-698
The 2020 Mw">Mw 5.8 Lone Pine earthquake, the largest earthquake on the Owens Valley fault zone, eastern California, since the nineteenth century, ruptured an extensional stepover in that fault. Owens Valley separates two normal‐faulting...
Telemetry evaluation of carbon dioxide as a behavioral deterrent for invasive carps
Aaron R. Cupp, Ashley K Lopez, Justin Smerud, John A. Tix, Jose Rivera, Nicholas M. Swyers, Marybeth K. Brey, Christa M. Woodley, David L. Smith, Mark P. Gaikowski
2021, Journal of Great Lakes Research (47) 59-68
Carbon dioxide (CO2) mixed into water is being explored as a possible management strategy to deter the upstream movements of invasive carps through navigation locks and other migratory pinch-points. This study used two-dimensional acoustic telemetry to assess the effectiveness of dissolved CO2 as a chemosensory deterrent to two carp species in...
Hydrocarbons to carboxyl-rich alicyclic molecules: A continuum model to describe biodegradation of petroleum-derived dissolved organic matter in contaminated groundwater plumes
David C. Podgorski, Phoebe Zito, Anne M. Kellerman, Barbara A. Bekins, Isabelle M. Cozzarelli, Donald F. Smith, Xiaoyan Cao, Klaus Schmidt-Rohr, Sasha Wagner, Aron Stubbins, Robert G. M. Spencer
2021, Journal of Hazardous Materials (402)
Relationships between dissolved organic matter (DOM) reactivity and chemical composition in a groundwater plume containing petroleum-derived DOM (DOMHC) were examined by quantitative and qualitative measurements to determine the source and chemical composition of the compounds that persist downgradient. Samples were collected from a transect down...
Group density, disease, and season shape territory size and overlap of social carnivores
E. E. Brandell, Nicholas M. Fountain-Jones, Marie L. J. Gilbertson, Paul C. Cross, P. J. Hudson, Douglas W. Smith, Daniel R. Stahler, Craig Packer, Meggan E. Craft
2021, Journal of Animal Ecology (90) 87-101
1. The spatial organization of a population can influence the spread of information, behaviour, and pathogens. Territory size and territory overlap, components of spatial organization, provide key information as these metrics may be indicators of habitat quality, resource dispersion, contact rates, and environmental risk (e.g., indirectly transmitted pathogens). Furthermore, sociality...
Perspectives on the paleolimnology of the late Eocene Florissant lake from diatom and sedimentary evidence at Clare’s Quarry, Teller County, Colorado, USA
Mary Ellen Benson, Dena M. Smith, Sarah A. Spaulding
2021, Book chapter, From saline to freshwater: The diversity of western lakes in space and time
The late Eocene Florissant Formation in central Colorado is a rich and diverse continental Lagerstätte yielding well-preserved fossil assemblages from lacustrine and fluvial facies. This investigation focused on the lacustrine facies at Clare’s Quarry and used biotic and abiotic evidence to characterize aspects of the lake and processes that resulted...
The Long-term effect of bleeding for Limulus amebocyte lysate on annual survival and recapture of tagged horseshoe crabs
David R. Smith, Joshua Newhard, Conor P. McGowan, C. Alyssa Butler
2020, Frontiers in Marine Science (7)
In the U.S., 525,000 horseshoe crabs (Limulus polyphemus) per year have been captured during 2013–2017, brought to biomedical facilities, and bled to produce Limulus amebocyte lysate (LAL), then mostly released to the area of capture. The Atlantic States Marine Fisheries Commission estimates short-term bleeding-induced mortality to be 15% (4% to...
Warmer temperatures interact with salinity to weaken physiological facilitation to stress in freshwater fishes
Richard H. Walker, Geoffrey D. Smith, Spencer B . Hudson, Susannah S. Susannah S. French, Annika W. Walters
2020, Conservation Physiology (8)
Management of stressors requires an understanding of how multiple stressors interact, how different species respond to those interactions and the underlying mechanisms driving observed patterns in species' responses. Salinization and rising temperatures are two pertinent stressors predicted to intensify in freshwater ecosystems, posing concern for how susceptible organisms achieve and...
A Bayesian framework for assessing extinction risk based on ordinal categories of population condition and projected landscape change
Daniel Bruce Fitzgerald, Andrew R Henderson, Kelly O. Maloney, Mary Freeman, John A. Young, Amanda E. Rosenberger, David C. Kazyak, David R. Smith
2020, Biological Conservation (253)
Many at-risk species lack standardized surveys across their range or quantitative data capable of detecting demographic trends. As a result, extinction risk assessments often rely on ordinal categories of risk based on explicit criteria or expert elicitation. This study demonstrates a...
Infectious diseases in Yellowstone’s wolves
Ellen E. Brandell, Emily S. Almberg, Paul C. Cross, Andrew P Dobson, Douglas W. Smith, Peter J. Hudson
2020, Book chapter, Yellowstone wolves: Science and discovery in the world's first national park
No abstract available....
