Roles of patch characteristics, drought frequency, and restoration in long-term trends of a widespread amphibian
Blake R. Hossack, M. J. Adams, Christopher A. Pearl, Kristine W. Wilson, Evelyn L. Bull, Kristin Lohr, Debra Patla, David S. Pilliod, Jason Jones, Kevin Wheeler, Samuel McKay, P. Stephen Corn
2013, Conservation Biology (27) 1410-1420
Despite the high profile of amphibian declines and the increasing threat of drought and fragmentation to aquatic ecosystems, few studies have examined long-term rates of change for a single species across a large geographic area. We analyzed growth in annual egg-mass counts of the Columbia spotted frog (Rana luteiventris) across...
Nutrient limitation of native and invasive N2-fixing plants in northwest prairies
Andrea S. Thorpe, Steven S. Perakis, Christina Catricala, Thomas N. Kaye
2013, PLoS ONE (8)
Nutrient rich conditions often promote plant invasions, yet additions of non-nitrogen (N) nutrients may provide a novel approach for conserving native symbiotic N-fixing plants in otherwise N-limited ecosystems. Lupinus oreganus is a threatened N-fixing plant endemic to prairies in western Oregon and southwest Washington (USA). We tested the effect of...
Data-driven modeling of background and mine-related acidity and metals in river basins
Michael J Friedel
2013, Environmental Pollution (184) 530-539
A novel application of self-organizing map (SOM) and multivariate statistical techniques is used to model the nonlinear interaction among basin mineral-resources, mining activity, and surface-water quality. First, the SOM is trained using sparse measurements from 228 sample sites in the Animas River Basin, Colorado. The model performance is validated by...
Forest calcium depletion and biotic retention along a soil nitrogen gradient
Steven S. Perakis, Emily R. Sinkhorn, Christina Catricala, Thomas D. Bullen, John A. Fitzpatrick, Justin D. Hynicka, Kermit Cromack Jr.
2013, Ecological Applications (23) 1947-1961
High nitrogen (N) accumulation in terrestrial ecosystems can shift patterns of nutrient limitation and deficiency beyond N toward other nutrients, most notably phosphorus (P) and base cations (calcium [Ca], magnesium [Mg], and potassium [K]). We examined how naturally high N accumulation from a legacy of symbiotic N fixation shaped P...
An alternative to soil taxonomy for describing key soil characteristics
Michael C. Duniway, Mark E. Miller, Joel R. Brown, Gordon Toevs
2013, Frontiers in Ecology and the Environment (11) 527-528
We are pleased to see the letter by Schimel and Chadwick (Front Ecol Environ 2013; 11[8]: 405–06), highlighting the importance of soil characterization in ecological and biogeochemical research and explaining the value of soil taxonomy, and we agree with the authors that reporting soil taxonomic classification would greatly increase the interpretive...
Effect of light, prey density, and prey type on the feeding rates of Hemimysis anomala
Kathleen E. Halpin, Brent T. Boscarino, Lars G. Rudstam, Mureen G. Walsh, Brian F. Lantry
2013, Hydrobiologia (720) 101-110
Hemimysis anomala is a near-shore mysid native to the Ponto-Caspian region that was discovered to have invaded Great Lakes ecosystems in 2006. We investigated feeding rates and prey preferences of adult and juvenile Hemimysis in laboratory experiments to gain insight on the potential for Hemimysis to disrupt food webs. For...
Combined impacts of current and future dust deposition and regional warming on Colorado River Basin snow dynamics and hydrology
Jeffrey S. Deems, Thomas H. Painter, Joseph J. Barsugli, Jayne Belnap, Bradley Udall
2013, Hydrology and Earth System Sciences (17) 4401-4413
The Colorado River provides water to 40 million people in seven western states and two countries and to 5.5 million irrigated acres. The river has long been overallocated. Climate models project runoff losses of 5–20% from the basin by mid-21st century due to human-induced climate change. Recent work has shown...
Genetic diversity and mutation of avian paramyxovirus serotype 1 (Newcastle disease virus) in wild birds and evidence for intercontinental spread
Andrew M. Ramey, Andrew B. Reeves, Haruko Ogawa, S. Ip, Kunitoshi Imai, V. N. Bui, Emi Yamaguchi, N. Y. Silko, C.L. Afonso
2013, Archives of Virology (158) 2495-2503
Avian paramyxovirus serotype 1 (APMV-1), or Newcastle disease virus, is the causative agent of Newcastle disease, one of the most economically important diseases for poultry production worldwide and a cause of periodic epizootics in wild birds in North America. In this study, we examined the genetic diversity of APMV-1 isolated...
A review on cylindrospermopsin: the global occurrence, detection, toxicity and degradation of a potent cyanotoxin
Armah A. de la Cruz, Anastasia Hiskia, Triantafyllos Kaloudis, Neil Chernoff, Donna Hill, Maria G. Antoniou, Xuexiang He, Keith Loftin, Kevin O’Shea, Cen Zhao, Miguel Pelaez, Changseok Han, Trevor J. Lynch, Dionysios D. Dionysiou
2013, Environmental Science: Processes and Impacts (15) 1979-2003
Cylindrospermopsin is an important cyanobacterial toxin found in water bodies worldwide. The ever-increasing and global occurrence of massive and prolonged blooms of cylindrospermopsin-producing cyanobacteria poses a potential threat to both human and ecosystem health. Its toxicity is associated with metabolic activation and may involve mechanisms that adversely affect a wide...
The significance of ultra-refracted surface gravity waves on sheltered coasts, with application to San Francisco Bay
D.M. Hanes, L. H. Erikson
2013, Estuarine, Coastal and Shelf Science (133) 129-136
Ocean surface gravity waves propagating over shallow bathymetry undergo spatial modification of propagation direction and energy density, commonly due to refraction and shoaling. If the bathymetric variations are significant the waves can undergo changes in their direction of propagation (relative to deepwater) greater than 90° over relatively short spatial scales....
Petrologic, tectonic, and metallogenic evolution of the southern segment of the ancestral Cascades magmatic arc, California and Nevada
Edward A. du Bray, David A. John, Brian L. Cousens
2013, Geosphere (10) 1-39
Ongoing arc magmatism along western North America was preceded by ancestral arc magmatism that began ca. 45 Ma and evolved into modern arc volcanism. The southern ancestral arc segment, active from ca. 30 to 3 Ma, adjoins the northern segment in northern California across a proposed subducted slab tear....
Estimating reef fish discard mortality using surface and bottom tagging: effects of hook injury and barotrauma
Paul J. Rudershausen, Jeffrey A. Buckel, Joseph E. Hightower
2013, Canadian Journal of Fisheries and Aquatic Sciences (71) 514-520
We estimated survival rates of discarded black sea bass (Centropristis striata) in various release conditions using tag–recapture data. Fish were captured with traps and hook and line from waters 29–34 m deep off coastal North Carolina, USA, marked with internal anchor tags, and observed for release condition. Fish tagged on...
A scenario study of seismically induced landsliding in Seattle using broadband synthetic seismograms
Kate E. Allstadt, John E. Vidale, Arthur D. Frankel
2013, Bulletin of the Seismological Society of America (103) 2971-2992
We demonstrate the value of utilizing broadband synthetic seismograms to assess regional seismically induced landslide hazard. Focusing on a case study of an Mw 7.0 Seattle fault earthquake in Seattle, Washington, we computed broadband synthetic seismograms that account for rupture directivity and 3D basin amplification. We then adjusted the computed motions on...
Using landscape epidemiological models to understand the distribution of chronic wasting disease in the Midwestern USA
Stacie J. Robinson, Michael D. Samuel, Robert E. Rolley, Paul Shelton
2013, Landscape Ecology (28) 1923-1935
Animal movement across the landscape plays a critical role in the ecology of infectious wildlife diseases. Dispersing animals can spread pathogens between infected areas and naïve populations. While tracking free-ranging animals over the geographic scales relevant to landscape-level disease management is challenging, landscape features that influence gene flow among wildlife...
Next generation of global land cover characterization, mapping, and monitoring
Chandra Giri, Bruce Pengra, J. Long, Thomas R. Loveland
2013, International Journal of Applied Earth Observation and Geoinformation (25) 30-37
Land cover change is increasingly affecting the biophysics, biogeochemistry, and biogeography of the Earth's surface and the atmosphere, with far-reaching consequences to human well-being. However, our scientific understanding of the distribution and dynamics of land cover and land cover change (LCLCC) is limited. Previous global land cover assessments performed using...
Consideration of reference points for the management of renewable resources under an adaptive management paradigm
Brian J. Irwin, Michael J. Conroy
2013, Environmental Conservation (40) 302-309
The success of natural resource management depends on monitoring, assessment and enforcement. In support of these efforts, reference points (RPs) are often viewed as critical values of management-relevant indicators. This paper considers RPs from the standpoint of objective-driven decision making in dynamic resource systems, guided by principles of structured decision...
Net primary productivity of subalpine meadows in Yosemite National Park in relation to climate variability
Peggy E. Moore, Jan W. Van Wagtendonk, Julie L. Yee, Mitchel P. McClaran, David N. Cole, Neil K. McDougald, Matthew L. Brooks
2013, Western North American Naturalist (73) 409-418
Subalpine meadows are some of the most ecologically important components of mountain landscapes, and primary productivity is important to the maintenance of meadow functions. Understanding how changes in primary productivity are associated with variability in moisture and temperature will become increasingly important with current and anticipated changes in climate. Our...
In situ spectrophotometric measurement of dissolved inorganic carbon in seawater
Xuewu Liua, Robert H. Byrne, Lori Adornato, Kimberly K. Yates, Eric Kaltenbacher, Xiaoling Ding, Bo Yang
2013, Environmental Science & Technology (47) 11106-11114
Autonomous in situ sensors are needed to document the effects of today’s rapid ocean uptake of atmospheric carbon dioxide (e.g., ocean acidification). General environmental conditions (e.g., biofouling, turbidity) and carbon-specific conditions (e.g., wide diel variations) present significant challenges to acquiring long-term measurements of dissolved inorganic carbon (DIC) with satisfactory accuracy...
Protocol for monitoring forest-nesting birds in National Park Service parks
Deanna K. Dawson, Murray G. Efford
2013, Report
These documents detail the protocol for monitoring forest-nesting birds in National Park Service parks in the National Capital Region Network (NCRN). In the first year of sampling, counts of birds should be made at 384 points on the NCRN spatially randomized grid, developed to sample terrestrial resources. Sampling should begin...
Evidence of Hybridization between Common Gartersnakes (Thamnophis sirtalis) and Butler’s Gartersnakes (Thamnophis butleri) in Wisconsin (USA).
Joshua M. Kapfer, Brian L. Sloss, Gregor W. Schuurman, Rori A. Paloski, Jeffrey M. Lorch
2013, Journal of Herpetology (47) 400-405
Snakes within the genus Thamnophis (Gartersnakes and Ribbonsnakes) are often found in sympatry throughout their geographic distributions. Past work has indicated that some sympatric species within this genus may hybridize, but research of this nature is limited. We attempted to determine whether hybridization occurs between two Thamnophis species native to the upper midwestern United...
An approach for characterizing the distribution of shrubland ecosystem components as continuous fields as part of NLCD
George Z. Xian, Collin G. Homer, Debbie Meyer, Brian J. Granneman
2013, ISPRS Journal of Photogrammetry and Remote Sensing (86) 136-149
Characterizing and quantifying distributions of shrubland ecosystem components is one of the major challenges for monitoring shrubland vegetation cover change across the United States. A new approach has been developed to quantify shrubland components as fractional products within National Land Cover Database (NLCD). This approach uses remote sensing data and...
Land-use and land-cover change in three corn belt ecoregions: Similarities and differences
Roger F. Auch, Chris R. Laingen, Mark A. Drummond, Kristi L. Sayler, Ryan R. Reker, Michelle A. Bouchard, Jeffrey J. Danielson
2013, Focus on Geography (56) 135-143
Land use categorical changes, though not as numerous as one might suspect, vary by type within the three designated ecozones of the Corn Belt with the westernmost zone showing the most temporary change vis-a-vis the more permanent changes taking place in the eastern and central zones....
Differences in extreme low salinity timing and duration differentially affect eastern oyster (Crassostrea virginica) size class growth and mortality in Breton Sound, LA
Megan K. LaPeyre, Benjamin S. Eberline, Thomas M. Soniat, Jerome F. La Peyre
2013, Estuarine, Coastal and Shelf Science (135) 146-157
Understanding how different life history stages are impacted by extreme or stochastic environmental variation is critical for predicting and modeling organism population dynamics. This project examined recruitment, growth, and mortality of seed (25–75 mm) and market (>75 mm) sized oysters along a salinity gradient over two years in Breton Sound, LA. In...
Mineral resource of the month: Phosphate rock
Stephen M. Jasinski
2013, Earth (December 2013)
As a mineral resource, “phosphate rock” is defined as unprocessed ore and processed concentrates that contain some form of apatite, a group of calcium phosphate minerals that is the primary source for phosphorus in phosphate fertilizers, which are vital to agriculture....
The suitability of a simplified isotope-balance approach to quantify transient groundwater-lake interactions over a decade with climatic extremes
Laura A. Sacks, Terrie M. Lee, Amy Swancar
2013, Journal of Hydrology (519) 3042-3053
Groundwater inflow to a subtropical seepage lake was estimated using a transient isotope-balance approach for a decade (2001–2011) with wet and dry climatic extremes. Lake water δ18O ranged from +0.80 to +3.48 ‰, reflecting the 4 m range in stage. The transient δ18O analysis discerned large differences in semiannual groundwater...