Building on crossvalidation for increasing the quality of geostatistical modeling
Ricardo A. Olea
2012, Stochastic Environmental Research and Risk Assessment (26) 73-82
The random function is a mathematical model commonly used in the assessment of uncertainty associated with a spatially correlated attribute that has been partially sampled. There are multiple algorithms for modeling such random functions, all sharing the requirement of specifying various parameters that have critical influence on the results. The...
Leveraging modern climatology to increase adaptive capacity across protected area networks
J.E. Davison, L.J. Graumlich, E.L. Rowland, Gregory T. Pederson, D.D. Breshears
2012, Global Environmental Change (22) 268-274
Human-driven changes in the global environment pose an increasingly urgent challenge for the management of ecosystems that is made all the more difficult by the uncertain future of both environmental conditions and ecological responses. Land managers need strategies to increase regional adaptive capacity, but relevant and rapid assessment approaches are...
Kansas Energy Sources: A Geological Review
D. F. Merriam, L. L. Brady, K.D. Newell
2012, Natural Resources Research (21) 163-175
Kansas produces both conventional energy (oil, gas, and coal) and nonconventional (coalbed gas, wind, hydropower, nuclear, geothermal, solar, and biofuels) and ranks the 22nd in state energy production in the U.S. Nonrenewable conventional petroleum is the most important energy source with nonrenewable, nonconventional coalbed methane gas becoming increasingly important. Many...
Oxygen and sulfur isotope systematics of sulfate produced during abiotic and bacterial oxidation of sphalerite and elemental sulfur
N. Balci, B. Mayer, W. C. Pat Shanks III, K.W. Mandernack
2012, Geochimica et Cosmochimica Acta (77) 335-351
Studies of metal sulfide oxidation in acid mine drainage (AMD) systems have primarily focused on pyrite oxidation, although acid soluble sulfides (e.g., ZnS) are predominantly responsible for the release of toxic metals. We conducted a series of biological and abiotic laboratory oxidation experiments with pure and Fe-bearing sphalerite (ZnS &...
Relationships between yolk androgens and nest density, laying date, and laying order in Western Burrowing Owls (Athene cunicularia hypugaea)
J.L. Welty, J.R. Belthoff, J. Egbert, H. Schwabl
2012, Canadian Journal of Zoology (90) 182-192
Increases in yolk androgens within and among avian clutches have been correlated with decreased incubation time, increased aggression within a nest, increased begging behaviour, decreased immune response, and decreased life span. Although the mechanisms that lead to variability in yolk androgens within and between clutches are not completely known, yolk...
The challenges of implementing pathogen control strategies for fishes used in biomedical research
C. Lawrence, D.G. Ennis, C. Harper, M.L. Kent, K. Murray, George Sanders
2012, Comparative Biochemistry and Physiology, Part C: Toxicology & Pharmacology (155) 160-166
Over the past several decades, a number of fish species, including the zebrafish, medaka, and platyfish/swordtail, have become important models for human health and disease. Despite the increasing prevalence of these and other fish species in research, methods for health maintenance and the management of diseases in laboratory populations of...
Discovery and characterization of secretory IgD in rainbow trout: secretory IgD is produced through a novel splicing mechanism
F. Ramirez-Gomez, W. Greene, K. Rego, J.D. Hansen, G. Costa, P. Kataria, E.S. Bromage
2012, Journal of Immunology (188) 1341-1349
The gene encoding IgH δ has been found in all species of teleosts studied to date. However, catfish (Ictalurus punctatus) is the only species of fish in which a secretory form of IgD has been characterized, and it occurs through the use of a dedicated δ-secretory exon, which is absent...
Effects of roads on survival of San Clemente Island foxes
N.P. Snow, William F. Andelt, Thomas R. Stanley, J.R. Resnik, L. Munson
2012, Journal of Wildlife Management (76) 243-252
Roads generate a variety of influences on wildlife populations; however, little is known about the effects of roads on endemic wildlife on islands. Specifically, road‐kills of island foxes (Urocyon littoralis) on San Clemente Island (SCI), Channel Islands, California, USA are a concern for resource managers. To determine the effects of...
QuakeCaster, an earthquake physics demonstration and exploration tool
K. Linton, R.S. Stein
2012, Seismological Research Letters (83) 150-155
A fundamental riddle of earthquake occurrence is that tectonic motions at plate interiors are steady, changing only subtly over millions of years, but at plate boundary faults, the plates are stuck for hundreds of years and then suddenly jerk forward in earthquakes. Why does this happen? The answer, as formulated...
Genetic diversity and species diversity of stream fishes covary across a land-use gradient
M.J. Blum, M.J. Bagley, D.M. Walters, S.A. Jackson, F.B. Daniel, D.J. Chaloud, Brian S. Cade
2012, Oecologia (168) 83-95
Genetic diversity and species diversity are expected to covary according to area and isolation, but may not always covary with environmental heterogeneity. In this study, we examined how patterns of genetic and species diversity in stream fishes correspond to local and regional environmental conditions. To do so, we compared population...
The impact of biotic/abiotic interfaces in mineral nutrient cycling: A study of soils of the Santa Cruz chronosequence, California
A. F. White, M. S. Schulz, D.V. Vivit, T.D. Bullen, J. Fitzpatrick
2012, Geochimica et Cosmochimica Acta (77) 62-85
Biotic/abiotic interactions between soil mineral nutrients and annual grassland vegetation are characterized for five soils in a marine terrace chronosequence near Santa Cruz, California. A Mediterranean climate, with wet winters and dry summers, controls the annual cycle of plant growth and litter decomposition, resulting in net above-ground productivities of...
Biomass and diversity of dry alpine plant communities along altitudinal gradients in the Himalayas
Tsewang Namgail, G.S. Rawat, C. Mishra, van Wieren, H.H.T. Prins
2012, Journal of Plant Research (125) 93-101
A non-linear relationship between phytodiversity and altitude has widely been reported, but the relationship between phytomass and altitude remains little understood. We examined the phytomass and diversity of vascular plants along altitudinal gradients on the dry alpine rangelands of Ladakh, western Himalaya. We used generalized linear and generalized additive models...
Microbial water quality before and after the repair of a failing onsite wastewater treatment system adjacent to coastal waters
K.E. Conn, M.Y. Habteselassie, Blackwood A. Denene, R.T. Noble
2012, Journal of Applied Microbiology (112) 214-224
Aims: The objective was to assess the impacts of repairing a failing onsite wastewater treatment system (OWTS, i.e., septic system) as related to coastal microbial water quality. Methods and Results: Wastewater, groundwater and surface water were monitored for environmental parameters, faecal indicator bacteria (total coliforms, Escherichia coli, enterococci) and the...
PhyloChipTM microarray comparison of sampling methods used for coral microbial ecology
Christina A. Kellogg, Yvette M. Piceno, Lauren M. Tom, Todd Z. DeSantis, David G. Zawada, Gary L. Andersen
2012, Journal of Microbiological Methods (88) 103-109
Interest in coral microbial ecology has been increasing steadily over the last decade, yet standardized methods of sample collection still have not been defined. Two methods were compared for their ability to sample coral-associated microbial communities: tissue punches and foam swabs, the latter being less invasive and preferred by reef...
Soil C and N patterns in a semiarid piñon-juniper woodland: Topography of slope and ephemeral channels add to canopy-intercanopy heterogeneity
Darin J. Law, David D. Breshears, Michael H. Ebinger, Clifton W. Meyer, Craig D. Allen
2012, Journal of Arid Environments (79) 20-24
Carbon and nitrogen are crucial to semiarid woodlands, determining decomposition, production and redistribution of water and nutrients. Carbon and nitrogen are often greater beneath canopies than intercanopies. Upslope vs. downslope position and ephemeral channels might also cause variation in C and N. Yet, few studies have simultaneously evaluated spatial variation...
Application of a weighted-averaging method for determining paleosalinity: a tool for restoration of south Florida's estuaries
G.L. Wingard, J.W. Hudley
2012, Estuaries and Coasts (35) 262-280
A molluscan analogue dataset is presented in conjunction with a weighted-averaging technique as a tool for estimating past salinity patterns in south Florida’s estuaries and developing targets for restoration based on these reconstructions. The method, here referred to as cumulative weighted percent (CWP), was tested using modern surficial samples collected...
Species richness effects on ecosystem multifunctionality depend on evenness, composition and spatial pattern
F.T. Maestre, A. P. Castillo-Monroy, M. A. Bowker, R. Ochoa-Hueso
2012, Journal of Ecology (100) 317-330
1. Recent studies have suggested that the simultaneous maintenance of multiple ecosystem functions (multifunctionality) is positively supported by species richness. However, little is known regarding the relative importance of other community attributes (e.g. spatial pattern, species evenness) as drivers of multifunctionality. 2. We conducted two microcosm experiments using model biological soil crust communities...
The influence of wave energy and sediment transport on seagrass distribution
Andrew W. Stevens, Jessica R. Lacy
2012, Estuaries and Coasts (35) 92-108
A coupled hydrodynamic and sediment transport model (Delft3D) was used to simulate the water levels, waves, and currents associated with a seagrass (Zostera marina) landscape along a 4-km stretch of coast in Puget Sound, WA, USA. A hydroacoustic survey of seagrass percent cover and nearshore bathymetry was conducted, and...
Climate change and human health: Spatial modeling of water availability, malnutrition, and livelihoods in Mali, Africa
Marta M. Jankowska, David Lopez-Carr, Chris Funk, Gregory J. Husak, Z.A. Chafe
2012, Applied Geography (33) 4-15
This study develops a novel approach for projecting climate trends in the Sahel in relation to shifting livelihood zones and health outcomes. Focusing on Mali, we explore baseline relationships between temperature, precipitation, livelihood, and malnutrition in 407 Demographic and Health Survey (DHS) clusters with a total of 14,238 children, resulting...
Temporal scaling of groundwater level fluctuations near a stream
K. E. Schilling, Y.-K. Zhang
2012, Ground Water (50) 59-67
Temporal scaling in stream discharge and hydraulic heads in riparian wells was evaluated to determine the feasibility of using spectral analysis to identify potential surface and groundwater interaction. In floodplains where groundwater levels respond rapidly to precipitation recharge, potential interaction is established if the hydraulic head (h) spectrum of riparian...
Supplementing seed banks to rehabilitate disturbed Mojave Desert shrublands: Where do all the seeds go?
Lesley A. DeFalco, Todd Esque, Melissa B. Nicklas, Jeffrey M. Kane
2012, Restoration Ecology (20) 85-94
Revegetation of degraded arid lands often involves supplementing impoverished seed banks and improving the seedbed, yet these approaches frequently fail. To understand these failures, we tracked the fates of seeds for six shrub species that were broadcast across two contrasting surface disturbances common to the Mojave Desert—sites compacted by concentrated...
Community-level response of fishes and aquatic macroinvertebrates to stream restoration in a third-order tributary of the Potomac River, USA
S.M. Selego, C.L. Rose, G.T. Merovich Jr., Stuart A. Welsh, James T. Anderson
2012, International Journal of Ecology (2012)
Natural stream channel design principles and riparian restoration practices were applied during spring 2010 to an agriculturally impaired reach of the Cacapon River, a tributary of the Potomac River which flows into the Chesapeake Bay. Aquatic macroinvertebrates and fishes were sampled from the restoration reach, two degraded control, and two...
Distribution and geochemistry of selected trace elements in the Sacramento River near Keswick Reservoir
Ronald C. Antweiler, Howard E. Taylor, Charles N. Alpers
2012, Chemical Geology (298-299) 70-78
The effect of heavy metals from the Iron Mountain Mines (IMM) Superfund site on the upper Sacramento River is examined using data from water and bed sediment samples collected during 1996–97. Relative to surrounding waters, aluminum, cadmium, cobalt, copper, iron, lead, manganese, thallium, zinc and the rare-earth elements (REE)...
One hundred years of volcano monitoring in Hawaii
J. Kauahikaua, Michael Poland
2012, Eos, Transactions, American Geophysical Union (93) 29-30
In 2012 the Hawaiian Volcano Observatory (HVO), the oldest of five volcano observatories in the United States, is commemorating the 100th anniversary of its founding. HVO's location, on the rim of Klauea volcano (Figure 1)one of the most active volcanoes on Earthhas provided an unprecedented opportunity over the past century...
Novel plant communities limit the effects of a managed flood to restore riparian forests along a large regulated river
D.J. Cooper, D.C. Andersen
2012, River Research and Applications (28) 204-215
Dam releases used to create downstream flows that mimic historic floods in timing, peak magnitude and recession rate are touted as key tools for restoring riparian vegetation on large regulated rivers. We analysed a flood on the 5th‐order Green River below Flaming Gorge Dam, Colorado, in a broad alluvial valley...