Wetlands and development influence fish diversity in a species-rich small river
Leandro E. Miranda, J.A. Martinez-Lanfranco, K. J. Kilgore
2019, Environmental Biology of Fishes (102) 873-886
We identified in-stream and off-stream characteristics that influenced various species diversity metrics in reaches of the Duck River Basin, Tennessee, USA. This relatively small basin is home to one of the most diverse freshwater fish faunas in North America. In all, over 325,000 native fish representing 136 native fish species...
Holocene thermokarst lake dynamics in northern Interior Alaska: The interplay of climate, fire, and subsurface hydrology
Lesleigh Anderson, Mary E. Edwards, Mark D. Shapley, Bruce P. Finney, Catherine Langdon
2019, Frontiers in Earth Science (7) 1-22
The current state of permafrost in Alaska and meaningful expectations for its future evolution are informed by long-term perspectives of previous permafrost degradation. Thermokarst processes in permafrost landscapes often lead to widespread lake formation and the spatial and temporal evolution of thermokarst lake landscapes reflects the combined effects of climate,...
Environmental and geomorphological changes on the eastern North American Continental Shelf across the Paleocene-Eocene Boundary
Marci M. Robinson, Whittney Spivey
2019, Paleoceanography and Paleoclimatology (34) 715-732
Foraminiferal evidence from two sites in southern Maryland, eastern United States, reveals a series of rapid ecological changes on the continental shelf during the onset of the Paleocene-Eocene Thermal Maximum (PETM). Benthic and planktic foraminifer assemblages from the South Dover Bridge (SDB) and Mattawoman Creek-Billingsley Road (MCBR) cores in the...
Changes in breeding population sizes of double-crested Cormorants Phalacrocorax auritus in the Humboldt Bay area, California, 1924–2017
Phillip J. Capitolo, Harry R. Carter, Julie L. Yee, Gerard J. McChesney, Michael W Parker, Richard J Young, Richard T. Golightly, W Breck Tyler
2019, Marine Ornithology: Journal of Seabird Research and Conservation (47) 115-126
To better understand recent population growth of the Double-crested Cormorant Phalacrocorax auritus along the Pacific coast of North America, we assessed long-term breeding population trends in the Humboldt Bay area, California, using aerial photographic survey data collected since 1989 as well as available prior data. The earliest documentations of breeding (but without...
Anatomical physiology of fishes
Christine L. Densmore
2019, Book chapter, Fish diseases and medicine
This chapter highlights the major consistencies and differences that are evident in the anatomy and physiology of those fish most likely to be encountered by the veterinarian or biologist working in the realm of aquatic animal health. It describes teleost fish, members of the infraclass Teleostei that includes bony fish...
Disentangling effects of invasive species and habitat while accounting for observer error in a long-term amphibian study
Jennifer Rowe, Adam Duarte, Christopher Pearl, Brome McCreary, Stephanie Galvan, James T. Peterson, Michael J. Adams
2019, Ecosphere (10)
The invasive American bullfrog (Lithobates catesbeianus) and a variety of non‐native sport fish commonly co‐occur in lowland lentic habitats of the western United States. Both invasive taxa are implicated in declines of native amphibians in this region, but few long‐term studies of communities exist. Further, field studies of invasive–native interactions...
Terrestrial lidar data of the February 14, 2019 Sausalito Boulevard Landslide, Sausalito, California
Brian D. Collins, Skye C. Corbett
2019, Data Series 1112
On February 14, 2019, just before 2:56 am local time (Pacific Standard Time), a landslide initiated from the hillslopes above the Hurricane Gulch section of the City of Sausalito, Marin County, California. The landslide, specifically classified as a debris flow, overran a road (Sausalito Boulevard) immediately below the landslide source...
Improving earthquake forecasts during swarms with a duration model
Andrea L. Llenos, Nicholas van der Elst
2019, Bulletin of the Seismological Society of America
Earthquake swarms present a challenge for operational earthquake forecasting because they are driven primarily by transient external processes, such as fluid flow, the behavior and duration of which are difficult to predict. In this study, we develop a swarm duration model to estimate how long a swarm is likely to...
Potential sea level rise for the Chitimacha Tribe of Louisiana
Kathryn A. Spear, William Jones, Kereen Griffith, Blair E. Tirpak, Kimberly Walden
2019, Open-File Report 2019-1030
Situated in the Mississippi Alluvial Plain of the Gulf Coast Prairie Landscape Conservation Cooperative (GCP LCC), the Chitimacha Tribe is one of four federally recognized tribes in Louisiana. The Tribal seat, trust lands/ reservation, and adjacent Tribal owned lands are located near Charenton, Louisiana, totaling nearly 1,000 acres. The...
Restoration affects sexual reproductive capacity in a salt marsh
Scott F. Jones, Erik S. Yando, Camille Stagg, Courtney T. Hall, Mark W. Hester
2019, Estuaries and Coasts (42) 976-986
Plant sexual reproduction is an important driver of plant community maintenance, dispersal, and recovery from disturbance. Despite this, sexual reproduction in habitats dominated by clonally spreading perennial species, such as salt marshes, is often ignored. Communities dominated by long-lived perennial species can still depend on sexual reproduction for recolonizing large...
Bioavailable iron production in airborne mineral dust: Controls by chemical composition and solar flux
Eshani Hettiarachchi, Richard L. Reynolds, Harland L. Goldstein, Bruce M. Moskowitz, Gayan Rubasinghege
2019, Atmospheric Environment (205) 90-102
A large part of oceanic biological production is limited by the scarcity of dissolved iron. Mineral dust aerosol, processed under acidic atmospheric conditions, is the primary natural source of bioavailable iron to oceanic life. However,...
Functional variation at an expressed MHC class IIß locus associates with Ranavirus infection intensity in larval anuran populations
Anna E. Savage, Carly R. Muletz-Wolz, Evan H. Campbell Grant, Robert C. Fleischer, Kevin P. Mulder
2019, Immunogenetics (17) 335-346
Infectious diseases are causing catastrophic losses to biodiversity globally. Iridoviruses in the genus Ranavirus are among the leading causes of amphibian disease-related mortality. Polymorphisms in major histocompatibility complex (MHC) genes are significantly associated with variation in amphibian susceptibility to pathogens. MHC genes encode diverse cell-surface molecules that can recognize and...
Spatial capture–recapture for categorically marked populations with an application to genetic capture–recapture
Ben C. Augustine, J. Andrew Royle, Sean M. Murphy, Richard B. Chandler, John J. Cox, Marcella Kelly
2019, Ecosphere (10)
Recently introduced unmarked spatial capture–recapture (SCR), spatial mark–resight (SMR), and 2‐flank spatial partial identity models (SPIMs) extend the domain of SCR to populations or observation systems that do not always allow for individual identity to be determined with certainty. For example, some species do not have natural marks that can...
Quaternary eolian sediments and Carolina Bays of the U.S. Atlantic Coastal Plain province
Christopher S. Swezey
2019, Conference Paper
Under modern conditions, the Atlantic Coastal Plain province of the eastern United States is not very conducive to widespread eolian sediment mobilization because of a humid and mesothermal climate, relatively low mean surface wind velocities (~1–3 m/sec), and relatively dense vegetation. LiDAR data, however, have revealed the presence of...
Living with wildfire in Montezuma County, Colorado: 2015 data report
Hannah Brenkert-Smith, James Meldrum, Pamela Wilson, Patricia A. Champ, Christopher M. Barth, Angela Boag
2019, Research Note RMRS-RN-81
Residents in the wildland-urban interface (WUI) can play an important role in reducing wildfire’s negative effects by performing wildfire risk mitigation on their property. This report offers insight into the wildfire risk mitigation activities and related considerations, such as attitudes, experiences, and concern about wildfire, for people with homes in...
Individual based modelling of fish migration in a 2-D river system: Model description and case study
Marcia N. Snyder, Nathan H. Schumaker, Joseph E Ebersole, Jason B. Dunham, Randy Comeleo, Matthew Keefer, Peter Leinenbach, Allen Brookes, Ben Cope, Jennifer Wu, John Palmer, Druscilla Keenan
2019, Landscape Ecology (34) 737-754
Context: Diadromous fish populations in the Pacific Northwest face challenges along their migratory routes from declining habitat quality, harvest, and barriers to longitudinal connectivity. These stressors complicate the prioritization of proposed management actions intended to improve conditions for migratory fishes including anadromous salmon and trout. Objectives: We describe a multi-scale hybrid...
Early career climate communications and networking
Ezra Markowitz, Michelle D. Staudinger
2019, Conference Paper
The Department of the Interior and the U.S. Geological Survey have made it a priority to train the next generation of scientists and resource managers. The Climate Adaptation Science Centers (CSC) and consortium institutions are working to contribute to this initiative by supporting and building a network of students across...
Mini-columns and ghost columns in Columbia river lava
James G. Moore
2019, Journal of Volcanology and Geothermal Research (374) 242-251
The master joints bounding the columns that make up the basal colonnade of large lava flows of the Columbia Plateau are, in places, flanked by sub-horizontal mini-columns that have grown normal to the master joints. The secondary mini-columns grow into the main columns and are clearly younger than them. They...
Energetic costs of aquatic locomotion in a subadult polar bear
Anthony M. Pagano, Amy Cutting, Nicole Nicassio-Hiskey, Amy Hash, Terrie M. Williams
2019, Marine Mammal Science (35) 649-659
Most marine mammals rely on swimming as their primary form of locomotion. These animals have evolved specialized morphologies, physiologies, and behaviors that have enabled them to efficiently move through an aquatic environment (Williams 1999). Such adaptations include body streamlining, modified plantar surfaces for propulsion, and abilities...
Relative prediction intervals reveal larger uncertainty in 3D approaches to predictive digital soil mapping of soil properties with legacy data
Travis Nauman, Michael C. Duniway
2019, Geoderma (347) 170-184
Fine scale maps of soil properties enable efficient land management and inform earth system models. Recent efforts to create soil property maps from field observations tend to use similar tree-based machine learning interpolation approaches, but often deal with depth of predictions, validation, and uncertainty differently. One of the main differences...
Using the value of information to improve conservation decision making
Friederike C. Bolam, Matthew J. Grainger, Kerrie L. Mengerson, Gavin B. Stewart, William J. Sutherland, Michael C. Runge, Philip J. K. McGowan
2019, Biological Reviews (94) 629-647
Conservation decisions are challenging, not only because they often involve difficult conflicts among outcomes that people value, but because our understanding of the natural world and our effects on it is fraught with uncertainty. Value of Information (VoI) methods provide an approach for understanding and managing uncertainty from the standpoint...
Microbial associations of four species of algal symbiont-bearing Foraminifers from the Florida Reef Tract, USA
Makenna M. Martin, Christina A. Kellogg, Pamela Hallock
2019, Journal of Foraminiferal Research (49) 178-190
While microbiome research is a rapidly expanding field of study, relatively little is known of the microbiomes associated with Foraminifera. This preliminary study investigated microbes associated with four species of Foraminifera, representing two taxonomic orders, which host three kinds of algal endosymbionts. A major objective was to explore potential influences...
The contribution of road-based citizen science to the conservation of pond-breeding amphibians
Sean Sterrett, Rachel A. Katz, William R. Fields, Evan H. Campbell Grant
2019, Journal of Applied Ecology (56) 988-995
Roadside amphibian citizen science (CS) programmes bring together volunteers focused on collecting scientific data while working to mitigate population declines by reducing road mortality of pond‐breeding amphibians. Despite the international popularity of these movement‐based, roadside conservation efforts (i.e. “big nights,” “bucket brigades” and “toad patrols”), direct benefits to conservation...
Mortality due to Tyzzer's disease of muskrats in northern Ohio, USA
Daniel A. Grear, Julia S. Lankton, Sara Zaleski, Mark Witt, Jeffrey M. Lorch
2019, Journal of Wildlife Diseases (55) 982-985
In 2017, we investigated a mortality event of muskrat (Ondatra zibethicus) in Northwest Ohio, USA, and determined the causes of death to be from Tyzzer's disease due to Clostridium piliforme and Klebsiella pneumoniae septicemia. The gross presentation resembled tularemia, which highlighted the importance of a complete diagnostic investigation....
Offshore landslide hazard curves from mapped landslide size distributions
Eric L. Geist, Uri S. ten Brink
2019, Journal of Geophysical Research B: Solid Earth (124) 3320-3334
We present a method to calculate landslide hazard curves along offshore margins based on size distributions of submarine landslides. The method analyzes ten different continental margins, that were mapped by high-resolution multibeam sonar with landslide scar areas measured by a consistent GIS procedure. Statistical tests of several different probability distribution...