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Not all publications have extents, not all extents are completely accurate
Late Holocene paleoceanography in the Chukchi and Beaufort Seas, Arctic Ocean, based on benthic foraminifera and ostracodes
Julia Lynn Seidenstein, Thomas M. Cronin, Laura Gemery, Lloyd D Keigwin, Christof Pearce, Martin Jakobsson, Helen K Coxall, Emily A Wei, Neal W. Driscoll
2018, Arktos: The Journal of Arctic Geosciences (4) 1-17
Calcareous microfossil assemblages in late Holocene sediments from the western Arctic continental shelf provide an important baseline for evaluating the impacts of today’s changing Arctic oceanography. This study compares 14C-dated late Holocene microfaunal assemblages of sediment cores SWERUS-L2-2-PC1, 2-MC4 and 2-KL1 (57 mwd), which record the last 4200 years in the Herald Canyon...
Using automated radio telemetry to quantify activity patterns of songbirds during stopover
Lynn N. Schofield, Jill L. Deppe, Theodore J. Zenzal Jr., Michael P. Ward, Robert H. Diehl, Rachel T. Bolus, Frank R. Moore
2018, The Auk (135) 949-963
During migration, birds require stopover habitat to rest and refuel before resuming flight. While long-distance migratory flights represent a large energy investment, stopover accounts for roughly two-thirds of a bird's total energy expenditure during migration. Therefore, birds should minimize energy expenditure while also minimizing time and predation risk during stopover....
Effects of local shoreline and subestuary watershed condition on waterbird community integrity: Influences of geospatial scale and season in the Chesapeake Bay
Diann J. Prosser, Jessica L. Nagel, Shay Howlin, Paul Marban, Daniel D. Day, R. Michael Erwin
2018, Estuaries and Coasts (41) 207-222
In many coastal regions throughout the world, there is increasing pressure to harden shorelines to protect human infrastructures against sea level rise, storm surge, and erosion. This study examines waterbird community integrity in relation to shoreline hardening and land use characteristics at three geospatial scales: (1) the shoreline scale characterized...
A novel technique for isolating DNA from Tempus™ blood RNA tubes after RNA isolation
Jason A. Ferrante, Michelle R. Giles, Emily Benzie, Margaret Hunter
2018, BMC Research Notes (11) 1-5
ObjectiveWe use Tempus blood RNA tubes (Applied Biosystems) during health assessments of American moose (Alces alces spp.) as a minimally invasive means to obtain RNA. Here we describe a novel protocol to additionally isolate high-quality DNA from the supernatant remaining after the RNA isolation methodology....
Using partial aggregation in spatial capture recapture
Cyril Milleret, Pierre Dupont, Henrik Broseth, Jonas Kindberg, J. Andrew Royle, Richard Bischof
2018, Methods in Ecology and Evolution (9) 1896-1907
Spatial capture–recapture (SCR) models are commonly used for analysing data collected using noninvasive genetic sampling (NGS). Opportunistic NGS often leads to detections that do not occur at discrete detector locations. Therefore, spatial aggregation of individual detections into fixed detectors (e.g., centre of grid cells) is an option to increase...
Real-time decision-making during emergency disease outbreaks
William J. M. Probert, Chris P. Jewell, Marleen Werkman, Christopher.J. Fonnesbeck, Yoshitaka Goto, Michael C. Runge, Satoshi Sekiguchi, Katriona Shea, Matt J. Keeling, Matthew J. Ferrari, Michael J. Tildesley
2018, PLOS Computational Biology (14) 1-18
In the event of a new infectious disease outbreak, mathematical and simulation models are commonly used to inform policy by evaluating which control strategies will minimize the impact of the epidemic. In the early stages of such outbreaks, substantial parameter uncertainty may limit the ability of models to provide accurate...
Impacts of coastal land use and shoreline armoring on estuarine ecosystems: An introduction to a special issue
Diann J. Prosser, Thomas E. Jordan, Jessica L. Nagel, Rochelle D. Seitz, Donald E. Weller, Dennis F. Whigham
2018, Estuaries and Coasts (41) 2-18
The nearshore land-water interface is an important ecological zone that faces anthropogenic pressure from development in coastal regions throughout the world. Coastal waters and estuaries like Chesapeake Bay receive and process land discharges loaded with anthropogenic nutrients and other pollutants that cause eutrophication, hypoxia, and other damage to shallow-water ecosystems....
The case for mean rupture distance in ground‐motion estimation
Eric M. Thompson, Annemarie S. Baltay Sundstrom
2018, Bulletin of the Seismological Society of America (108) 2462-2477
This article advocates for the use of mean rupture distances that we contend are more physically representative of the distance to an earthquake and are simpler than minimum distances. Many current ground‐motion models (GMMs) rely on numerous modifications of minimum rupture distances to accurately model near‐source ground motions. These modifications,...
Broadband synthetic seismograms for magnitude 9 earthquakes on the Cascadia megathrust based on 3D simulations and stochastic synthetics, part 1: Methodology and overall results
Arthur D. Frankel, Erin A. Wirth, Nasser A. Marafi, John Vidale, William J. Stephenson
2018, Bulletin of the Seismological Society of America (108) 2347-2369
We have produced a large set of broadband (0–10 Hz) synthetic seismograms for Mw 9.0 earthquakes on the Cascadia megathrust by combining synthetic seismograms derived from 3D finite‐difference simulations (⁠≤1 Hz⁠) with finite‐source, stochastic synthetics (⁠≥1 Hz⁠). We used a compound rupture model consisting of high stress drop M<span class="inline-formula...
Sex-specific variation in denning by brown bears
Lindsey Mangipane, Jerrold L. Belant, Buck Mangipane, David Gustine, Grant V. Hilderbrand
2018, Mammalian Biology (93) 38-44
Denning characteristics of brown bears (Ursus arctos) have been described in numerous studies; however, population specific factors (i.e., landscape characteristics and climate) can greatly influence the location and timing of denning. Our objective was to evaluate den-site characteristics and denning chronology for male and female brown bears in Lake Clark National Park...
Examination of contaminant exposure and reproduction of ospreys (Pandion haliaetus) nesting in Delaware Bay and River in 2015
Barnett A. Rattner, Rebecca S. Lazarus, Thomas G. Bean, Peter C. McGowan, Carl R. Callahan, Richard A. Erickson, Robert Hale
2018, Science of the Total Environment (639) 596-607
A study of ospreys (Pandion haliaetus) nesting in the coastal Inland Bays of Delaware, and the Delaware Bay and Delaware River in 2015 examined spatial and temporal trends in contaminant exposure, food web transfer and reproduction. Concentrations of organochlorine pesticides and metabolites, polychlorinated biphenyls (PCBs), coplanar PCB toxic equivalents, polybrominated diphenyl ethers (PBDEs) and other flame retardants in sample eggs were...
Nest tree use by Southern flying squirrels in fragmented midwestern landscapes
James S. Zweep, Christopher N. Jacques, Sean E. Jenkins, Robert W. Klaver, Shelli A. Dubay
2018, Wildlife Society Bulletin (42) 430-437
Southern flying squirrels (Glaucomys volans; SFS) nest in naturally formed cavities in snags and hardwoods found in mature, oak (Quercus spp.)–hickory (Carya spp.) forests. Intensive forest fragmentation of the Midwest United States limits the number of available nesting trees. We quantified annual nest‐site selection patterns by southern flying squirrels across fragmented landscapes...
Mechanisms of earthquake‐induced chemical and fluid transport to carbonate groundwater springs after earthquakes
Michael R. Rosen, Gilberto Binda, Claire Archer, Andrea Pozzi, Alessandro Michetti, Paula Noble
2018, Water Resources Research (54) 5225-5244
Mechanisms by which hydrochemical changes occur after earthquakes are not well documented. We use the 2016–2017 central Italy seismic sequence, which caused notable hydrochemical transient variations in groundwater springs to address this topic, with special reference to effects on fractured carbonate aquifers. Hydrochemistry measured before and after the earthquakes at...
The confluences of ideas leading to, and the flow of ideas emerging from, individual-based modeling of riverine fishes
Henriette I. Jager, Donald L. DeAngelis
2018, Ecological Modelling (384) 341-352
In this review article, we trace the history of events leading to the development of individual-based models (IBMs) to represent aquatic organisms in rivers and streams. As a metaphor, we present this history as a series of confluences between individual scientists (tributaries) sharing ideas. We describe contributions of these models...
Exploring the pathology of an epidermal disease affecting a circum-Antarctic sea star
Laura Nunez-Pons, Thierry M. Work, Carlos Angulo-Preckler, Juan Moles, Conxita Avila
2018, Scientific Reports (8) 1-12
Over the past decade, unusual mortality outbreaks have decimated echinoderm populations over broad geographic regions, raising awareness globally of the importance of investigating such events. Echinoderms are key components of marine benthos for top-down and bottom-up regulations of plants and animals; population declines of these individuals can have significant ecosystem-wide...
Regional variation in drivers of connectivity for two frog species (Rana pretiosa and R. luteiventris) from the U.S. Pacific Northwest
Jeanne M. Robertson, Melanie A. Murphy, Christopher Pearl, M. J. Adams, Monica I. Paez-Vacas, Susan M. Haig, David S. Pilliod, Andrew Storfer, W. Chris Funk
2018, Molecular Ecology (27) 3242-3256
Comparative landscape genetics has uncovered high levels of variability in which landscape factors affect connectivity among species and regions. However, the relative importance of species traits versus environmental variation for predicting landscape patterns of connectivity is unresolved. We provide evidence from a landscape genetics study of two sister taxa of...
Mapping and measuring aeolian sand dunes with photogrammetry and LiDAR from unmanned aerial vehicles (UAV) and multispectral satellite imagery on the Paria Plateau, AZ, USA
Daniel Solazzo, Joel B. Sankey, Temuulen T. Sankey, Seth M. Munson
2018, Geomorphology (319) 174-185
The Paria Plateau is a potentially important but relatively unstudied aeolian sand source area in the Grand Canyon region of Arizona, USA. This study used unmanned aerial vehicle(UAV) - based LiDAR and structure-from-motion (SfM) photogrammetry to produce high-resolution topographic models of aeolian dunes on the plateau. We combined the dune topography data with...
An exploratory Bayesian network for estimating the magnitudes and uncertainties of selected water-quality parameters at streamgage 03374100 White River at Hazleton, Indiana, from partially observed data
David J. Holtschlag
2018, Scientific Investigations Report 2018-5053
An exploratory discrete Bayesian network (BN) was developed to assess the potential of this type of model for estimating the magnitudes and uncertainties of an arbitrary subset of unmeasured water-quality parameters given the measured complement of parameters historically measured at a U.S. Geological Survey streamgage. Water-quality data for 27 water-quality...
Seismic evidence for significant melt beneath the Long Valley Caldera, California, USA
Ashton F. Flinders, David R. Shelly, Phillip B. Dawson, David P. Hill, Barbara Tripoli, Yang Shen
2018, Geology (46) 799-802
A little more than 760 ka ago, a supervolcano on the eastern edge of California (United States) underwent one of North America's largest Quaternary explosive eruptions. Over this ~6-day-long eruption, pyroclastic flows blanketed the surrounding ~50 km with more than 1400 km3 of the now-iconic Bishop Tuff, with ashfall reaching as...
International meeting on sarcoptic mange in wildlife, June 2018, Blacksburg, Virginia, USA
Francisca Astorga, Scott Carver, Emily S. Almberg, Giovane R. Sousa, Kimberly Wingfield, Kevin D. Niedringhaus, Peach Van Wick, Luca Rossi, Yue Xie, Paul C. Cross, Samer Angelone, Christian Gortazar, Luis E. Escobar
2018, Parasites & Vectors (11) 1-10
Sarcoptic mange is a globally distributed disease caused by the burrowing mite Sarcoptes scabiei, which also causes scabies in humans. A wide and increasing number of wild mammal species are reported to be susceptible to mange; however, the impacts of the disease in wildlife populations, mechanisms involved in its eco-epidemiological...
Pliocene erosional pulse and glacier-landscape feedbacks in the western Alaska Range
Richard O. Lease
2018, Earth and Planetary Science Letters (497) 62-68
Pliocene–Pleistocene glaciation modified the topography and erosion of most middle- and high-latitude mountain belts, because the evolution of catchment topography controls long-term glacier mass balance and erosion. Hence, characterizing how erosion rates change during repeated glaciations can help test hypothesized glacier erosion-landscape feedbacks across a range of settings. To better...
Growth stress response to sea level rise in species with contrasting functional traits: A case study in tidal freshwater forested wetlands
Lu Zhai, Ken W. Krauss, Xin Liu, Jamie A. Duberstein, William H. Conner, Donald L. DeAngelis, Leonel d.S.L Sternberg
2018, Environmental and Experimental Botany (155) 378-386
With rising sea levels, mortality of glycophytes can be caused by water and nutrient stress under increasing salinity. However, the relative effects of these two stressors may vary by species-specific functional traits. For example, deciduous species, with leaves typically emerging during low salinity periods of the year, may suffer less...
Posthatch development of otoliths and daily ring genesis in age-0 Spotted Gars
James M. Long, Richard A. Snow
2018, Transactions of the American Fisheries Society (147) 1146-1152
Gars (Lepisosteidae) are increasingly being managed as top-level predators that are important to overall ecosystem health. Given the paucity of information on early life history for many species, additional early life history data would aid in gar conservation and management. Daily rings in otoliths are useful for determining many early...
Cougar dispersal and natal homing in a desert environment
David Choate, Kathleen M. Longshore, Daniel B. Thompson
2018, Western North American Naturalist (78) 221-235
We present a review of cougar dispersal literature and the first evidence of natural (i.e., unmanipulated) homing behavior by a dispersing male cougar (Puma concolor) that sustained severe injuries crossing the northern Mojave Desert. Based on Global Positioning System and ground tracking data, the male traveled a total distance of...