CDMetaPOP: An individual-based, eco-evolutionary model for spatially explicit simulation of landscape demogenetics
Erin L. Landguth, Andrew Bearlin, Casey Day, Jason B. Dunham
2016, Methods in Ecology and Evolution (8) 4-11
1. Combining landscape demographic and genetics models offers powerful methods for addressing questions for eco-evolutionary applications.2. Using two illustrative examples, we present Cost–Distance Meta-POPulation, a program to simulate changes in neutral and/or selection-driven genotypes through time as a function of individual-based movement, complex spatial population dynamics, and multiple and...
U-Pb, Re-Os, and Ar/Ar geochronology of rare earth element (REE)-rich breccia pipes and associated host rocks from the Mesoproterozoic Pea Ridge Fe-REE-Au deposit, St. Francois Mountains, Missouri
John N. Aleinikoff, David Selby, John F. Slack, Warren C. Day, Renee M. Pillers, Michael A. Cosca, Cheryl Seeger, C. Mark Fanning, Iain Samson
2016, Economic Geology (111) 1883-1914
Rare earth element (REE)-rich breccia pipes (600,000 t @ 12% rare earth oxides) are preserved along the margins of the 136-million metric ton (Mt) Pea Ridge magnetite-apatite deposit, within Mesoproterozoic (~1.47 Ga) volcanic-plutonic rocks of the St. Francois Mountains terrane in southeastern Missouri, United States. The breccia pipes cut the...
Evaluation of the initial thematic output from a continuous change-detection algorithm for use in automated operational land-change mapping by the U.S. Geological Survey
Bruce Pengra, Alisa L. Gallant, Zhe Zhu, Devendra Dahal
2016, Remote Sensing (8) 1-33
The U.S. Geological Survey (USGS) has begun the development of operational, 30-m resolution annual thematic land cover data to meet the needs of a variety of land cover data users. The Continuous Change Detection and Classification (CCDC) algorithm is being evaluated as the likely methodology following early trials. Data for...
Terrestrial cosmogenic surface exposure dating of glacial and associated landforms in the Ruby Mountains-East Humboldt Range of central Nevada and along the northeastern flank of the Sierra Nevada
Steven G. Wesnousky, Richard W. Briggs, Marc W. Caffee, Rick J. Ryerson, Robert C. Finkel, Lewis A. Owen
2016, Geomorphology (268) 72-81
Deposits near Lamoille in the Ruby Mountains-East Humboldt Range of central Nevada and at Woodfords on the eastern edge of the Sierra Nevada each record two distinct glacial advances. We compare independent assessments of terrestrial cosmogenic nuclide (TCN) surface exposure ages for glacial deposits that we have determined to those...
Modelling with stakeholders - Next generation
Alexey Voinov, Nagesh Kolagani, Michael K McCall, Pierre D. Glynn, Marit E Kragt, Frank O Ostermann, Suzanne A Pierce, Palaniappan Ramu
2016, Environmental Modelling and Software (77) 196-220
This paper updates and builds on ‘Modelling with Stakeholders’ Voinov and Bousquet, 2010 which demonstrated the importance of, and demand for, stakeholder participation in resource and environmental modelling. This position paper returns to the concepts of that publication and reviews the progress made since 2010. A new development is the...
An evaluation of methods for estimating decadal stream loads
Casey J. Lee, Robert M. Hirsch, Gregory E. Schwarz, David J. Holtschlag, Stephen D. Preston, Charles G. Crawford, Aldo V. Vecchia
2016, Journal of Hydrology (542) 185-203
Effective management of water resources requires accurate information on the mass, or load of water-quality constituents transported from upstream watersheds to downstream receiving waters. Despite this need, no single method has been shown to consistently provide accurate load estimates among different water-quality constituents, sampling sites, and sampling regimes. We evaluate...
Age, growth and fall diet of channel catfish in Cheat Lake, West Virginia
Corbin D. Hilling, Stuart A. Welsh, Dustin M. Smith
2016, Journal of Fish and Wildlife Management (7) 304-314
Acidification has historically impaired Cheat Lake's fish community, but recent mitigation efforts within the Cheat River watershed have improved water quality and species richness. Presently, channel catfish Ictalurus punctatus are abundant and attain desirable sizes for anglers. We evaluated the age, growth, and fall diet of the population. We collected...
Evidence for range contraction of snowshoe hare in Pennsylvania
Duane R. Diefenbach, Stephen L. Rathbun, J.K. Vreeland, Deborah Grove, William J. Kanapaux
2016, Northeastern Naturalist (23) 229-248
In Pennsylvania, Lepus americanus (Snowshoe Hare) is near the southern limits of its range and at risk of range contraction because of loss of early-successional forest and impacts of climate change. We used hunter-harvest data to investigate changes in the distribution of Snowshoe Hare in Pennsylvania (1983–2011), forest inventory and...
Lethal thermal maxima for age-0 pallid and shovelnose sturgeon: Implications for shallow water habitat restoration
David Deslauriers, Laura B. Heironimus, Steven R. Chipps
2016, River Research and Applications (32) 1872-1878
We evaluated temperature tolerance in age-0 pallid and shovelnose sturgeon (Scaphirhynchus albus and Scaphirhynchus platorynchus), two species that occur sympatrically in the Missouri and Mississippi Rivers. Fish (0.04–18 g) were acclimated to water temperatures of 13, 18 or 24 °C to quantify temperatures associated with lethal thermal maxima (LTM). The results show...
Effect of morphological fin curl on the swimming performance and station-holding ability of juvenile shovelnose sturgeon
David Deslauriers, Ryan Johnston, Steven R. Chipps
2016, Journal of Fish and Wildlife Management (7) 198-204
We assessed the effect of fin-curl on the swimming and station-holding ability of juvenile shovelnose sturgeon Scaphirhynchus platorynchus (mean fork length = 17 cm; mean weight = 16 g; n = 21) using a critical swimming speed test performed in a small swim chamber (90 L) at 20°C. We quantified...
Louisiana waterthrush and benthic macroinvertebrate response to shale gas development
Petra Wood, Mack W. Frantz, Douglas A. Becker
2016, Journal of Fish and Wildlife Management (7) 423-433
Because shale gas development is occurring over large landscapes and consequently is affecting many headwater streams, an understanding of its effects on headwater-stream faunal communities is needed. We examined effects of shale gas development (well pads and associated infrastructure) on Louisiana waterthrush Parkesia motacilla and benthic macroinvertebrate communities in 12...
Diet overlap and predation between largemouth bass and walleye in Wisconsin lakes using DNA barcoding to improve taxonomic resolution
Craig J. Kelling, Daniel A. Isermann, Brian L. Sloss, Keith N. Turnquist
2016, North American Journal of Fisheries Management (36) 621-629
Over the last decade, the abundance of Largemouth Bass Micropterus salmoides has increased in many northern Wisconsin lakes, causing concern among anglers and biologists regarding the potential for Largemouth Bass to negatively affect populations of Walleye Sander vitreus through predation or competition for prey. Our objectives were to determine whether...
A comparison of helicopter-borne electromagnetic systems for hydrogeologic studies
Paul A. Bedrosian, Cyril Schamper, Esben Auken
2016, Geophysical Prospecting (64) 192-215
The increased application of airborne electromagnetic surveys to hydrogeological studies is driving a demand for data that can consistently be inverted for accurate subsurface resistivity structure from the near surface to depths of several hundred metres. We present an evaluation of three commercial airborne electromagnetic systems over two test blocks...
Predicting invasiveness of species in trade: Climate match, trophic guild and fecundity influence establishment and impact of non-native freshwater fishes
Jennifer G. Howeth, Crysta A. Gantz, Paul L. Angermeier, Emmanuel A. Frimpong, Michael H. Hoff, Reuben P. Keller, Nicholas E. Mandrak, Michael P. Marchetti, Julian D. Olden, Christina M. Romagosa, David M. Lodge
2016, Diversity and Distributions (22) 148-160
AimImpacts of non-native species have motivated development of risk assessment tools for identifying introduced species likely to become invasive. Here, we develop trait-based models for the establishment and impact stages of freshwater fish invasion, and use them to screen non-native species common in international trade. We also determine which species...
Implications of the methodological choices for hydrologic portrayals of climate change over the contiguous United States: Statistically downscaled forcing data and hydrologic models
Naoki Mizukami, Martyn P. Clark, Ethan D. Gutmann, Pablo A. Mendoza, Andrew J. Newman, Bart Nijssen, Ben Livneh, Lauren E. Hay, Jeffrey R. Arnold, Levi D. Brekke
2016, Journal of Hydrometeorology (17) 75-98
Continental-domain assessments of climate change impacts on water resources typically rely on statistically downscaled climate model outputs to force hydrologic models at a finer spatial resolution. This study examines the effects of four statistical downscaling methods [bias-corrected constructed analog (BCCA), bias-corrected spatial disaggregation applied at daily (BCSDd) and monthly scales...
Local environmental context conditions the impact of Russian olive in a heterogeneous riparian ecosystem
Graham M. Tuttle, Gabrielle L. Katz, Jonathan M. Friedman, Andrew P. Norton
2016, Invasive Plant Science and Management (9) 272-289
Local abiotic and biotic conditions can alter the strength of exotic species impacts. To better understand the effects of exotic species on invaded ecosystems and to prioritize management efforts, it is important that exotic species impacts are put in local environmental context. We studied how differences in plant community composition,...
Late quaternary changes in lakes, vegetation, and climate in the Bonneville Basin reconstructed from sediment cores from Great Salt Lake: Chapter 11
Robert S. Thompson, Charles G. Oviatt, Jeffrey S. Honke, John McGeehin
2016, Book chapter, Developments in earth surface processes: Lake Bonneville — A scientific update
Sediment cores from Great Salt Lake (GSL) provide the basis for reconstructing changes in lakes, vegetation, and climate for the last ~ 40 cal ka. Initially, the coring site was covered by a shallow saline lake and surrounded by Artemisia steppe or steppe-tundra under a cold and dry climate. As Lake Bonneville...
Geomorphic evolution of the San Luis Basin and Rio Grande in southern Colorado and northern New Mexico
Chester A. Ruleman, Michael Machette, Ren A. Thompson, Dan M Miggins, Brent M Goehring, James B. Paces
2016, GSA Field Guides (44) 291-333
The San Luis Basin encompasses the largest structural and hydrologic basin of the Rio Grande rift. On this field trip, we will examine the timing of transition of the San Luis Basin from hydrologically closed, aggrading subbasins to a continuous fluvial system that eroded the basin, formed the Rio Grande...
Fidelity and persistence of Ring-billed (Larus delawarensis) and Herring (Larus argentatus) gulls to wintering sites
Daniel E. Clark, Kiana K. G. Koenen, Jillian J. Whitney, Kenneth G. MacKenzie, Stephen DeStefano
2016, Waterbirds (39) 220-234
While the breeding ecology of gulls (Laridae) has been well studied, their movements and spatial organization during the non-breeding season is poorly understood. The seasonal movements, winter-site fidelity, and site persistence of Ring-billed (Larus delawarensis) and Herring (L. argentatus) gulls to wintering areas were studied from 2008–2012. Satellite transmitters were...
An evaluation of behavior inferences from Bayesian state-space models: A case study with the Pacific walrus
William S. Beatty, Chadwick V. Jay, Anthony S. Fischbach
2016, Marine Mammal Science (32) 1299-1318
State-space models offer researchers an objective approach to modeling complex animal location data sets, and state-space model behavior classifications are often assumed to have a link to animal behavior. In this study, we evaluated the behavioral classification accuracy of a Bayesian state-space model in Pacific walruses using Argos satellite tags...
Golden-winged Warbler nest-site habitat selection: Chapter 7
Theron M. Terhune II, Kyle R. Aldinger, David A. Buehler, David J. Flaspohler, Jeffrey L. Larkin, John P. Loegering, Katie L. Percy, Amber M. Roth, Curtis G. Smalling, Petra Wood
2016, Book chapter, Golden-winged Warbler ecology, conservation, and habitat management (Studies in Avian Biology, volume 49)
Avian habitat selection occurs at multiple spatial scales to incorporate life history requirements. Breeding habitat of Golden-winged Warblers (Vermivora chrysoptera) is characterized by largely forested landscapes containing natural or anthropogenic disturbance elements that maintain forest patches in early stages of succession. Breeding habitat occurs in a variety of settings, including...
The Bear River's history and diversion: Constraints, unsolved problems, and implications for the Lake Bonneville record: Chapter 2
Joel L. Pederson, Susanne U. Janecke, Marith C. Reheis, Darrell S. Kaufmann, Robert Q. Oaks Jr.
2016, Book chapter, Developments in earth surface processes
The shifting course of the Bear River has influenced the hydrologic balance of the Bonneville basin through time, including the magnitude of Lake Bonneville. This was first recognized by G.K. Gilbert and addressed in the early work of Robert Bright, who focused on the southeastern Idaho region of Gem...
Pinedale glacial history of the upper Arkansas River valley: New moraine chronologies, modeling results, and geologic mapping
Avriel D. Schweinsberg, Jason P. Briner, Ralph R. Shroba, Joseph M. Licciardi, Eric M. Leonard, Keith A. Brugger, Charles M. Russell
2016, Book chapter, Unfolding the Geology of the West
This field-trip guide outlines the glacial history of the upper Arkansas River valley, Colorado, and builds on a previous GSA field trip to the area in 2010. The following will be presented: (1) new cosmogenic 10Be exposure ages of moraine boulders from the Pinedale and Bull Lake glaciations (Marine Isotope...
Awell-preserved conodont fauna from the Pennsylvanian Excello Shale of Iowa, U. S. A.
Merlynd K. Nestell, Bruce R. Wardlaw, John P. Pope
2016, Micropaleontology (62) 93-114
A superbly preserved discrete element conodont fauna has been recovered from carbonate concretions from the upper Desmoinesian (Pennsylvanian) Excello Shale at two localities in south-central Iowa. The multielement apparatuses for Gondolella wardlawi (new species), Idiognathodus acutus, Idioprioniodus conjunctus, and Neognathodus roundyi are reconstructed. Rare specimens of Idiognathodus tuberis (new species)...
Proceedings of the 2015 international summit on fibropapillomatosis: Global status, trends, and population impacts
Stacy A. Hargrove, Thierry M. Work, Shandell Brunson, Allen M. Foley, George H. Balazs
2016, NOAA Technical Memorandum NMFS-PIFSC-54
The 2015 International Summit on Fibropapillomatosis (FP) was convened in Honolulu, Hawaii June 11-14, 2015. Scientists from around the world were invited to present results from sea turtle monitoring and research programs as they relate to the global status, trends, and population impacts of FP on green turtles. The participants...