Reexamining the frequency range of hearing in silver (Hypophthalmichthys molitrix) and bighead (H. nobilis) carp
Brooke J. Vetter, Marybeth K. Brey, Allen F. Meninger
2018, PLoS ONE (13) 1-15
Silver (Hypophthalmichthys molitrix) and bighead (H. nobilis) carp (collectively bigheaded carp) are invasive fish that threaten aquatic ecosystems in the upper Midwest United States and the Laurentian Great Lakes. Controlling bigheaded carp is a priority of fisheries managers and one area of focus involves developing acoustic deterrents to prevent upstream migration....
Associating sex-biased and seasonal behaviour with contact patterns and transmission risk in Gopherus agassizii
Christina M. Aiello, Todd Esque, K. E. Nussear, P. G. Emblidge, Peter J. Hudson
2018, Behaviour (155) 585-619
Interactions between wildlife hosts act as transmission routes for directly transmitted pathogens and vary in ways that affect transmission efficiency. Identifying drivers of contact variation can allow both contact inference and estimation of transmission dynamics despite limited data. In desert tortoises, mating strategy, burrow use and seasonal change influence numerous...
Genome-wide SNP data and morphology support the distinction of two new species of Kovarikia Soleglad, Fet & Graham, 2014 endemic to California (Scorpiones, Vaejovidae)
Robert W. Bryson Jr., Dustin A. Wood, Matthew R. Graham, Michael E. Soleglad, John E. McCormack
2018, ZooKeys (739) 79-106
Morphologically conserved taxa such as scorpions represent a challenge to delimit. We recently discovered populations of scorpions in the genus Kovarikia Soleglad, Fet & Graham, 2014 on two isolated mountain ranges in southern California. We generated genome-wide single nucleotide polymorphism data and used Bayes factors species delimitation to compare...
High pressure size exclusion chromatography (HPSEC) determination of dissolved organic matter molecular weight revisited: Accounting for changes in stationary phases, analytical standards, and isolation methods
Brandon C. McAdams, George R. Aiken, Diane M. McKnight, William A. Arnold, Yu-Ping Chin
2018, Environmental Science & Technology (52) 722-730
We reassessed the molecular weight of dissolved organic matter (DOM) determined by high pressure size exclusion chromatography (HPSEC) using measurements made with different columns and various generations of polystyrenesulfonate (PSS) molecular weight standards. Molecular weight measurements made with a newer generation HPSEC column and PSS standards from more recent lots...
Juvenile Chinook Salmon mortality in a Snake River Reservoir: Smallmouth Bass predation revisited
John M. Erhardt, Kenneth F. Tiffan, William P. Connor
2018, Transactions of the American Fisheries Society (147) 316-328
Predation by nonnative fishes has been identified as a contributing factor in the decline of juvenile salmonids in the Columbia River basin. We examined the diet composition of Smallmouth Bass Micropterus dolomieu and estimated the consumption and predation loss of juvenile Chinook Salmon Oncorhynchus tshawytscha in Lower Granite Reservoir on the Snake River. We...
A multistate open robust design: population dynamics, reproductive effort, and phenology of sea turtles from tagging data
William L. Kendall, Seth Stapleton, Gary C. White, James I. Richardson, Kristen N. Pearson, Peri Mason
2018, Ecological Monographs (89)
Understanding population dynamics, and how it is influenced by exogenous and endogenous factors, is important to the study and conservation of species. Moreover, for migratory species, the phenology and duration of use of a given location can also influence population structure and dynamics. For many species, breeding abundance, survival, and...
Size, growth, and size‐selective mortality of subyearling Chinook Salmon during early marine residence in Puget Sound
Madilyn M. Gamble, Kristin A. Connelly, Jennifer R. Gardner, Joshua W. Chamberlin, Kenneth I. Warheit, David A. Beauchamp
2018, Transactions of the American Fisheries Society (147) 370-289
In marine ecosystems, survival can be heavily influenced by size‐selective mortality during juvenile life stages. Understanding how and when size‐selective mortality operates on a population can reveal underlying growth dynamics and size‐selective ecological processes affecting the population and thus can be used to guide conservation efforts. For subyearling Chinook Salmon Oncorhynchus...
Factors affecting long-term trends in surface-water quality in the Gwynns Falls watershed, Baltimore City and County, Maryland, 1998–2016
Emily H. Majcher, Ellen L. Woytowitz, Alexander J. Reisinger, Peter M. Groffman
2018, Open-File Report 2018-1038
Factors affecting water-quality trends in urban streams are not well understood, despite current regulatory requirements and considerable ongoing investments in gray and green infrastructure. To address this gap, long-term water-quality trends and factors affecting these trends were examined in the Gwynns Falls, Maryland, watershed during 1998–2016 in cooperation with Blue...
Explicitly reporting tests of hypotheses improves communication of science
Michael S. Mitchell, Sarah N. Sells, Sarah B. Bassing, Kristin J. Barker, Allison Keever, Shannon C. Forshee, James W. Goerz
2018, Journal of Wildlife Management (82) 671-673
Hypothesis testing is fundamental to producing therigorous biological inferences needed to reliably inform wildlife managemen...
Proximate composition, lipid utilization and validation of a non‐lethal method to determine lipid content in migrating American shad Alosa sapidissima
Shannon Michael Bayse, Amy M. Regish, Stephen D. McCormick
2018, Journal of Fish Biology (92) 1832-1848
Lipid content forms the most important energy reserve in anadromous fish and can limit survival, migration and reproductive success. A fat meter was evaluated and compared with a traditional extractive method of measuring available lipid for migrating American shad Alosa sapidissima in the Connecticut River, U.S.A. The fat meter gives rapid (<10 s)...
One-meter topobathymetric digital elevation model for Majuro Atoll, Republic of the Marshall Islands, 1944 to 2016
Monica Palaseanu-Lovejoy, Sandra K. Poppenga, Jeffrey J. Danielson, Dean J. Tyler, Dean B. Gesch, Maria Kottermair, Andrea Jalandoni, Edward Carlson, Cindy A. Thatcher, Matthew M. Barbee
2018, Scientific Investigations Report 2018-5047
Atoll and island coastal communities are highly exposed to sea-level rise, tsunamis, storm surges, rogue waves, king tides, and the occasional combination of multiple factors, such as high regional sea levels, extreme high local tides, and unusually strong wave set-up. The elevation of most of these atolls averages just under...
Overview of the geologic effects of the November 14, 2016, Mw 7.8 Kaikoura, New Zealand, earthquake
Randall W. Jibson, Kate E. Allstadt, Francis K. Rengers, Jonathan W. Godt
2018, Scientific Investigations Report 2017-5146
The November 14, 2016, Kaikoura, New Zealand, earthquake (moment magnitude [Mw] 7.8) triggered more than 10,000 landslides over an area of about 12,000 square kilometers in the northeastern part of the South Island of New Zealand. In collaboration with GNS Science (the Institute of Geological and Nuclear Science Limited), we...
A North American Hydroclimate Synthesis (NAHS) of the Common Era
Jessica R. Rodysill, Lesleigh Anderson, Thomas M. Cronin, Miriam C. Jones, Robert S. Thompson, David B. Wahl, Debra A. Willard, Jason A. Addison, Jay R. Alder, Katherine H. Anderson, Lysanna Anderson, John A. Barron, Christopher E. Bernhardt, Steven W. Hostetler, Natalie M. Kehrwald, Nicole Khan, Julie N. Richey, Scott W. Starratt, Laura E. Strickland, Michael Toomey, Claire C. Treat, G. Lynn Wingard
2018, Global and Planetary Change (162) 175-198
This study presents a synthesis of century-scale hydroclimate variations in North America for the Common Era (last 2000 years) using new age models of previously published multiple proxy-based paleoclimate data. This North American Hydroclimate Synthesis (NAHS) examines regional hydroclimate patterns and related environmental indicators, including vegetation, lake water elevation, stream flow...
Identifying holes in the greater sage-grouse conservation umbrella
Jason D. Carlisle, Douglas A. Keinath, Shannon E. Albeke, Anna D. Chalfoun
2018, Journal of Wildlife Management (82) 948-957
The umbrella species concept, wherein multiple species are indirectly protected under the umbrella of a reserve created for one, is intended to enhance conservation efficiency. Although appealing in theory and common in practice, empirical tests of the concept have been scarce. We used a real-world, semi-protected reserve established to protect...
Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America
Andrew M. Ramey, Thomas J. DeLiberto, Yohannes Berhane, David E. Swayne, David E. Stallknecht
2018, Virology (518) 55-63
Following detections of highly pathogenic (HP) influenza A viruses (IAVs) in wild birds inhabiting East Asia after the turn of the millennium, the intensity of sampling of wild birds for IAVs increased throughout much of North America. The objectives for many research and surveillance efforts were directed towards detecting Eurasian...
Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska
Andrew M. Ramey, Jorge Hernandez, Veronica Tyrlov, Brian D. Uher-Koch, Joel A. Schmutz, Clara Atterby, Josef D. Jarhult, Jonas Bonnedahl
2018, EcoHealth (15) 72-81
We explored the abundance of antibiotic-resistant Escherichia coli among migratory birds at remote sites in Alaska and used a comparative approach to speculate on plausible explanations for differences in detection among species. At a remote island site, we detected antibiotic-resistant E. coli phenotypes in samples collected from glaucous-winged gulls (<i...
Wave attenuation across a tidal marsh in San Francisco Bay
Madeline R. Foster-Martinez, Jessica R. Lacy, Matthew C. Ferner, Evan A. Variano
2018, Coastal Engineering (136) 26-40
Wave attenuation is a central process in the mechanics of a healthy salt marsh. Understanding how wave attenuation varies with vegetation and hydrodynamic conditions informs models of other marsh processes that are a function of wave energy (e.g. sediment transport) and allows for the incorporation of marshes into coastal protection...
Benthic assemblages of mega epifauna on the Oregon continental margin
Lenaig G. Hemery, Sarah K. Henkel, Guy R. Cochrane
2018, Continental Shelf Research (159) 24-32
Environmental assessment studies are usually required by a country's administration before issuing permits for any industrial activities. One of the goals of such environmental assessment studies is to highlight species assemblages and habitat composition that could make the targeted area unique. A section of the Oregon continental slope that had...
Anthropocene landscape change and the legacy of nineteenth- and twentieth-century mining in the Fourmile Catchment, Colorado Front Range
David P. Dethier, William B. Ouimet, Sheila F. Murphy, Maneh Kotikian, Will Wicherski, Rachel M. Samuels
2018, Annals of the American Association of Geographers (108) 917-937
Human impacts on earth surface processes and materials are fundamental to understanding the proposed Anthropocene epoch. This study examines the magnitude, distribution, and long-term context of nineteenth- and twentieth-century mining in the Fourmile Creek catchment, Colorado, coupling airborne LiDAR topographic analysis with historical documents and field studies of river banks...
Mineral constraints on arctic caribou (Rangifer tarandus): a spatial and phenological perspective
K. W. Oster, P.S. Barboza, David D. Gustine, Kyle Joly, R. D. Shively
2018, Ecosphere (9)
Arctic caribou (Rangifer tarandus) have the longest terrestrial migration of any ungulate but little is known about the spatial and seasonal variation of minerals in summer forages and the potential impacts of mineral nutrition on the foraging behavior and nutritional condition of arctic caribou. We investigated the phenology, availability, and...
Phylogeny and species traits predict bird detectability
Peter Solymos, Steven M. Matsuoka, Diana Stralberg, Nicole K. S. Barker, Erin M. Bayne
2018, Ecography (41) 1595-1603
Avian acoustic communication has resulted from evolutionary pressures and ecological constraints. We therefore expect that auditory detectability in birds might be predictable by species traits and phylogenetic relatedness. We evaluated the relationship between phylogeny, species traits, and field‐based estimates of the two processes that determine species detectability (singing rate and...
GIS database and discussion for the distribution, composition, and age of Cenozoic volcanic rocks of the Pacific Northwest Volcanic Aquifer System study area
David R. Sherrod, Mackenzie K. Keith
2018, Open-File Report 2018-1030
A substantial part of the U.S. Pacific Northwest is underlain by Cenozoic volcanic and continental sedimentary rocks and, where widespread, these strata form important aquifers. The legacy geologic mapping presented with this report contains new thematic categorization added to state digital compilations published by the U.S. Geological Survey for Oregon,...
The Ozark Plateaus Regional Aquifer Study—Documentation of a groundwater-flow model constructed to assess water availability in the Ozark Plateaus
Brian R. Clark, Joseph M. Richards, Katherine J. Knierim
2018, Scientific Investigations Report 2018-5035
Recent short-term drought conditions have emphasized the need to better understand the delicate balance between abundance, sustainability, and scarcity of groundwater in the Ozark Plateaus aquifer system. In 2014, the U.S. Geological Survey began construction of a groundwater-flow model as a tool for the assessment of groundwater availability in the...
Water-quality, bed-sediment, and biological data (October 2015 through September 2016) and statistical summaries of data for streams in the Clark Fork Basin, Montana
Kent A. Dodge, Michelle I. Hornberger, Matthew A. Turner
2018, Open-File Report 2017-1136
Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, to...
Evaluating and monitoring forest fuel treatments using remote sensing applications in Arizona, U.S.A.
Roy E. Petrakis, Miguel L. Villarreal, Zhuoting Wu, Robert Hetzler, Barry R. Middleton, Laura M. Norman
2018, Forest Ecology and Management (413) 48-61
The practice of fire suppression across the western United States over the past century has led to dense forests, and when coupled with drought has contributed to an increase in large and destructive wildfires. Forest management efforts aimed at reducing flammable fuels through various fuel treatments can help to restore...
