Navigational inlets are conduits for land-based sources of pollution
J.C. Flutch, Dale W. Griffin, Erin K. Lipp
2012, Book chapter, Tropical connections: south Florida's marine environment
No abstract available....
Production and disposal of waste materials from gas and oil extraction from the Marcellus Shale Play in Pennsylvania
Kelly O. Maloney, David A. Yoxtheimer
2012, Environmental Practice (14) 278-287
The increasing world demand for energy has led to an increase in the exploration and extraction of natural gas, condensate, and oil from unconventional organic-rich shale plays. However, little is known about the quantity, transport, and disposal method of wastes produced during the extraction process. We examined the quantity of...
Subducted seamounts and recent earthquakes beneath the central Cascadia forearc
Anne M. Trehu, Richard J. Blakely, Mark C. Williams
2012, Geology (40) 103-106
Bathymetry and magnetic anomalies indicate that a seamount on the Juan de Fuca plate has been subducted beneath the central Cascadia accretionary complex and is now located ∼45 km landward of the deformation front. Passage of this seamount through the accretionary complex has resulted in a pattern of uplift followed...
Comparison of electrical conductivity calculation methods for natural waters
R. Blaine McCleskey, D. Kirk Nordstrom, Joseph N. Ryan
2012, Limnology and Oceanography: Methods (10) 952-967
The capability of eleven methods to calculate the electrical conductivity of a wide range of natural waters from their chemical composition was investigated. A brief summary of each method is presented including equations to calculate the conductivities of individual ions, the ions incorporated, and the method's limitations. The ability of...
Preliminary physical stratigraphy, biostratigraphy, and geophysical data of the USGS South Dover Bridge Core, Talbot County, Maryland
Wilma B. Aleman Gonzalez, David S. Powars, Ellen Seefelt, Lucy E. Edwards, Jean M. Self-Trail, Colleen T. Durand, Arthur P. Schultz, Peter P. McLaughlin
2012, Open-File Report 2012-1218
The South Dover Bridge (SDB) corehole was drilled in October 2007 in Talbot County, Maryland. The main purpose for drilling this corehole was to characterize the Upper Cretaceous and Paleogene lithostratigraphy and biostratigraphy of the aquifers and confining units of this region. The data obtained from this core also will...
Ore genesis constraints on the Idaho Cobalt Belt from fluid inclusion gas, noble gas isotope, and ion ratio analyses
Albert H. Hofstra, Gary P. Landis
2012, Economic Geology (107) 1189-1205
The Idaho cobalt belt is a 60-km-long alignment of deposits composed of cobaltite, Co pyrite, chalcopyrite, and gold with anomalous Nb, Y, Be, and rare-earth elements (REEs) in a quartz-biotite-tourmaline gangue hosted in Mesoproterozoic metasedimentary rocks of the Lemhi Group. It is the largest cobalt resource in the United States...
Exploring similarities among many species distributions
Scott Simmerman, Jingyuan Wang, James Osborne, Kimberly Shook, Jia Hu, William Godsoe, Theodore R. Simons
2012, Conference Paper, Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment: Bridging from the eXtreme to the campus and beyond
Collecting species presence data and then building models to predict species distribution has been long practiced in the field of ecology for the purpose of improving our understanding of species relationships with each other and with the environment. Due to limitations of computing power as well as limited means of...
Upper Klamath Basin Landsat Image for August 19, 2006: Path 44 Row 31
Daniel T. Snyder
2012, Report
This image is a mosaic of Landsat-5 images of the upper Klamath Basin. The original images were obtained from the U.S. Geological Survey Earth Resources Observation and Science Center (EROS). EROS is responsible for archive management and distribution of Landsat data products. The Landsat-5 satellite is part of an ongoing...
Genetic and environmental influences on cold hardiness of native and introduced riparian trees
Jonathan M. Friedman, James E. Roelle, Brian S. Cade
2012, Conference Paper, National Proceedings: Forest and Conservation Nursery Associations – 2011
To explore latitudinal genetic variation in cold hardiness and leaf phenology, we planted a common garden of paired collections of native and introduced riparian trees sampled along a latitudinal gradient. The garden in Fort Collins, Colorado (latitude 40.6°N), included 681 native plains cottonwood (Populus deltoides subsp. monilifera) and introduced saltcedar...
Can arsenic occurrence rate in bedrock aquifers be predicted?
Qiang Yang, Hun Bok Jung, Robert G. Marvinney, Charles W. Culbertson, Yan Zheng
2012, Environmental Science & Technology (46) 2080-2087
A high percentage (31%) of groundwater samples from bedrock aquifers in the greater Augusta area, Maine was found to contain greater than 10 μg L–1 of arsenic. Elevated arsenic concentrations are associated with bedrock geology, and more frequently observed in samples with high pH, low dissolved oxygen, and low nitrate. These...
Biomass and diversity of dry alpine plant communities along altitudinal gradients in the Himalayas
Tsewang Namgail, G.S. Rawat, C. Mishra, van Wieren, H.H.T. Prins
2012, Journal of Plant Research (125) 93-101
A non-linear relationship between phytodiversity and altitude has widely been reported, but the relationship between phytomass and altitude remains little understood. We examined the phytomass and diversity of vascular plants along altitudinal gradients on the dry alpine rangelands of Ladakh, western Himalaya. We used generalized linear and generalized additive models...
Induction of anti-viral genes during acute infection with Viral hemorrhagic septicemia virus (VHSV) genogroup IVa in Pacific herring (Clupea pallasii)
John D. Hansen, James C. Woodson, Paul K. Hershberger, Courtney Grady, Jacob L. Gregg, Maureen K. Purcell
2012, Fish and Shellfish Immunology (32) 259-267
Infection with the aquatic rhabdovirus Viral hemorrhagic septicemia virus (VHSV) genogroup IVa results in high mortality in Pacific herring (Clupea pallasii) and is hypothesized to be a potential limiting factor for herring recovery. To investigate anti-viral immunity in the Pacific herring, four immune response genes were identified: the myxovirus resistance (Clpa-Mx), a...
Microsatellite marker isolation and development for the giant Pacific Octopus (Enteroctopus dofleini)
Rebecca K. Toussaint, G. Kevin Sage, Sandra L. Talbot, David Scheel
2012, Conservation Genetics Resources (4) 545-548
We isolated and developed 18 novel microsatellite markers for the giant Pacific octopus (Enteroctopus dofleini) and examined them for 31 individuals from Prince William Sound (PWS), Alaska. These loci displayed moderate levels of allelic diversity (averaging 11 alleles per locus) and heterozygosity (averaging 65%). Seven loci deviated from Hardy–Weinberg Equilibrium...
Semiochemical compounds of preen secretion reflect genetic make-up in a seabird species
S. Leclaire, T. Merkling, C. Raynaud, Herve Mulard, J.-M. Bessiere, E.M. Lhuillier, Scott A. Hatch, E. Danchin
2012, Proceedings of the Royal Society B: Biological Sciences (279) 1185-1193
Several vertebrates choose their mate according to genetic heterozygosity and relatedness, and use odour cues to assess their conspecifics' genetic make-up. In birds, although several species (including the black-legged kittiwake) exhibit non-random mating according to genetic traits, the cues used to assess genetic characteristics remain unknown. The importance of olfaction...
Roles of saltcedar (Tamarix spp.) and capillary rise in salinizing a non-flooding terrace on a flow-regulated desert river
E. P. Glenn, K. Morino, Pamela L. Nagler, R. S. Murray, S. Pearlstein, K. R. Hultine
2012, Journal of Arid Environments (79) 56-65
Tamarix spp. (saltcedar) secretes salts and has been considered to be a major factor contributing to the salinization of river terraces in western US riparian zones. However, salinization can also occur from the capillary rise of salts from the aquifer into the vadose zone. We investigated the roles of saltcedar and...
Isotopically modified nanoparticles for enhanced detection in bioaccumulation studies
S.K. Misra, A. Dybowska, D. Berhanu, Marie Noele Croteau, Samuel N. Luoma, A.R. Boccaccini, E. Valsami-Jones
2012, Environmental Science & Technology (46) 1216-1222
This work presents results on synthesis of isotopically enriched (99% 65Cu) copper oxide nanoparticles and its application in ecotoxicological studies. 65CuO nanoparticles were synthesized as spheres (7 nm) and rods (7 × 40 nm). Significant differences were observed between the reactivity and dissolution of spherical and rod shaped nanoparticles. The extreme sensitivity...
Rapid microsatellite identification from illumina paired-end genomic sequencing in two birds and a snake
T.A. Castoe, A.W. Poole, A. P. J. de Koning, K.L. Jones, D.F. Tomback, Sara J. Oyler-McCance, Jennifer A. Fike, S.L. Lance, J.W. Streicher, E.N. Smith, D.D. Pollock
2012, PLoS ONE (7)
Identification of microsatellites, or simple sequence repeats (SSRs), can be a time-consuming and costly investment requiring enrichment, cloning, and sequencing of candidate loci. Recently, however, high throughput sequencing (with or without prior enrichment for specific SSR loci) has been utilized to identify SSR loci. The direct “Seq-to-SSR” approach has an...
Evidence for earthquake triggering of large landslides in coastal Oregon, USA
W.H. Schulz, S.L. Galloway, J.D. Higgins
2012, Geomorphology (141-142) 88-98
Landslides are ubiquitous along the Oregon coast. Many are large, deep slides in sedimentary rock and are dormant or active only during the rainy season. Morphology, observed movement rates, and total movement suggest that many are at least several hundreds of years old. The offshore Cascadia subduction zone produces great...
Statistical analyses to support guidelines for marine avian sampling. Final report
Brian P. Kinlan, Elise Zipkin, Allan F. O’Connell, Chris Caldow
2012, NOAA Technical Memorandum NOS NCCOS 158
Interest in development of offshore renewable energy facilities has led to a need for high-quality, statistically robust information on marine wildlife distributions. A practical approach is described to estimate the amount of sampling effort required to have sufficient statistical power to identify species-specific “hotspots” and “coldspots” of marine bird abundance...
The FOBIMO (FOraminiferal BIo-MOnitoring) initiative—Towards a standardised protocol for soft-bottom benthic foraminiferal monitoring studies
Joachim Schoenfeld, Elisabeth Alve, Emmanuelle Geslin, Frans Jorissen, Sergei Korsun, Silva Spezzaferri, Sigal Abramovich, Ahuva Almogi-Labin, Eric Armynot du Chatelet, Christine Barras, Luisa Bergamin, Erica Bicchi, Vincent Bouchet, Alejandro Cearreta, Letizia Di Bella, Noortje Dijkstra, Sibelle Trevisan Disaro, Luciana Ferraro, Fabrizio Frontalini, Giordana Gennari, Elena Golikova, Kristin Haynert, Silvia Hess, Katrine Husum, Virginia Martins, Mary McGann, Shai Oron, Elena Romano, Silvia Mello Sousa, Akira Tsujimoto
2012, Marine Micropaleontology (94-95) 1-13
The European Community Marine Strategy Framework Directive (MSFD) was established to provide guidelines for monitoring the quality of marine ecosystems. Monitoring the status of marine environments is traditionally based on macrofauna surveys, for which standardised methods have been established. Benthic foraminifera are also good indicators of environmental status because of...
Determination of sediment provenance by unmixing the mineralogy of source-area sediments: The "SedUnMix" program
John T. Andrews, D. D. Eberl
2012, Marine Geology (291-294) 24-33
Along the margins of areas such as Greenland and Baffin Bay, sediment composition reflects a complex mixture of sources associated with the transport of sediment in sea ice, icebergs, melt-water and turbidite plumes. Similar situations arise in many contexts associated with sediment transport and with the mixing of sediments from...
Mineral parageneses, regional architecture, and tectonic evolution of Franciscan metagraywackes, Cape Mendocino-Garberville-Covelo 30' x 60' quadrangles, northwest California
W. G. Ernst, Robert J. McLaughlin
2012, Tectonics (31)
The Franciscan Complex is a classic subduction-zone assemblage. In northwest California, it comprises a stack of west vergent thrust sheets: westernmost Eastern Belt outliers; Central Belt mélange; Coastal Belt Yager terrane; Coastal Belt Coastal terrane; Coastal Belt King Range/False Cape terranes. We collected samples and determined P-T conditions of recrystallization...
Community-level response of fishes and aquatic macroinvertebrates to stream restoration in a third-order tributary of the Potomac River, USA
Stephen M. Selego, Charnee L. Rose, George T. Merovich Jr., Stuart A. Welsh, James T. Anderson
2012, International Journal of Ecology
Natural stream channel design principles and riparian restoration practices were applied during spring 2010 to an agriculturally impaired reach of the Cacapon River, a tributary of the Potomac River which flows into the Chesapeake Bay. Aquatic macroinvertebrates and fishes were sampled from the restoration reach, two degraded control, and two...
Expert knowledge as a foundation for the management of secretive species and their habitat
C. Ashton Drew, Jaime Collazo
2012, Book chapter, Expert knowledge and its application in landscape ecology
In this chapter, we share lessons learned during the elicitation and application of expert knowledge in the form of a belief network model for the habitat of a waterbird, the King Rail (Rallus elegans). A belief network is a statistical framework used to graphically represent and evaluate hypothesized...
Presence of avian influenza viruses in waterfowl and wetlands during summer 2010 in California: Are resident birds a potential reservoir?
V. Henaux, M.D. Samuel, Robert J. Dusek, J. P. Fleskes, Hon S. Ip
2012, PLoS ONE (7)
Although wild waterfowl are the main reservoir for low pathogenic avian influenza viruses (LPAIv), the environment plays a critical role for the circulation and persistence of AIv. LPAIv may persist for extended periods in cold environments, suggesting that waterfowl breeding areas in the northern hemisphere may be an important reservoir...
