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Not all publications have extents, not all extents are completely accurate
Capturing change: the duality of time-lapse imagery to acquire data and depict ecological dynamics
Emma M. Brinley Buckley, Craig R. Allen, Michael Forsberg, Michael Farrell, Andrew J. Caven
2017, Ecology and Society (22) 1-12
We investigate the scientific and communicative value of time-lapse imagery by exploring applications for data collection and visualization. Time-lapse imagery has a myriad of possible applications to study and depict ecosystems and can operate at unique temporal and spatial scales to bridge the gap between large-scale satellite imagery projects and...
Diet composition, quality and overlap of sympatric American pronghorn and gemsbok
James W. Cain III, Mindi M. Avery, Colleen A. Caldwell, Laurie B. Abbott, Jerry L. Holechek
2017, Wildlife Biology (2017) 1-10
Species with a long evolutionary history of sympatry often have mechanisms for resource partitioning that reduce competition. However, introduced non-native ungulates often compete with native ungulates and competitive effects can be exacerbated in arid regions due to low primary productivity. Our objectives were to characterize diet composition, quality, and overlap...
Balancing stability and flexibility in adaptive governance: An analysis of tools available in U.S. environmental law
Robin Kundis Craig, Ahjond S. Garmestani, Craig R. Allen, Craig Anthony Arnold, Hannah E. Birge, Daniel A. DeCaro, Alexander K. Fremier, Hannah Gosnell, Edella Schlager
2017, Ecology and Society (22) 1-15
Adaptive governance must work “on the ground,” that is, it must operate through structures and procedures that the people it governs perceive to be legitimate and fair, as well as incorporating processes and substantive goals that are effective in allowing social-ecological systems (SESs) to adapt to climate change and other...
Culturally induced range infilling of eastern redcedar: a problem in ecology, an ecological problem, or both?
Aubrey Streit Krug, Daniel R. Uden, Craig R. Allen, Dirac Twidwell
2017, Ecology and Society (22)
The philosopher John Passmore distinguished between (1) “problems in ecology,” or what we might call problems in scientific understanding of ecological change, and (2) “ecological problems,” or what we might call problems faced by societies due to ecological change. The spread of eastern redcedar (Juniperus virginiana) and conversion of the...
Challenges and solutions for applying the travel cost demand model to geographically remote visitor destinations: A case study of bear viewing at Katmai National Park and Preserve
Leslie Richardson, Christopher Huber, John B. Loomis
2017, Human Dimensions of Wildlife (22) 550-563
Remote and unique destinations present difficulties when attempting to construct traditional travel cost models to value recreation demand. The biggest limitation comes from the lack of variation in the dependent variable, defined as the number of trips taken over a set time frame. There are various approaches that can be...
Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway
Andrew M. Ramey, Nichola J. Hill, Troy Cline, Magdalena Plancarte, Susan De La Cruz, Michael L. Casazza, Joshua T. Ackerman, Joseph P. Fleskes, T. Winston Vickers, Andrew B. Reeves, Frances Gulland, Christine Fontaine, Diann J. Prosser, Jonathan Runstadler, Walter M. Boyce
2017, Emerging Microbes & Infections (6) 1-10
We used surveillance data collected in California before, concurrent with, and subsequent to an outbreak of highly pathogenic (HP) clade 2.3.4.4 influenza A viruses (IAVs) in 2014–2015 to (i) evaluate IAV prevalence in waterfowl, (ii) assess the evidence for spill-over infections in marine mammals and (iii) genetically characterize low-pathogenic (LP)...
New insight into the origin of manganese oxide ore deposits in the Appalachian Valley and Ridge of northeastern Tennessee and northern Virginia, USA
Sarah K. Carmichael, Daniel H. Doctor, Crystal G. Wilson, Joshua Feierstein, Ryan J. McAleer
2017, GSA Bulletin (129) 1158-1180
Manganese oxide deposits have long been observed in association with carbonates within the Appalachian Mountains, but their origin has remained enigmatic for well over a century. Ore deposits of Mn oxides from several productive sites located in eastern Tennessee and northern Virginia display morphologies that include botryoidal and branching forms,...
Optimal control of an invasive species using a reaction-diffusion model and linear programming
Mathieu Bonneau, Fred A. Johnson, Brian J. Smith, Christina M. Romagosa, Julien Martin, Frank J. Mazzotti
2017, Ecosphere (8) 1-17
Managing an invasive species is particularly challenging as little is generally known about the species’ biological characteristics in its new habitat. In practice, removal of individuals often starts before the species is studied to provide the information that will later improve control. Therefore, the locations and the amount of control...
Compositional signatures in acoustic backscatter over vegetated and unvegetated mixed sand-gravel riverbeds
Daniel D. Buscombe, Paul E. Grams, Matthew A. Kaplinski
2017, Journal of Geophysical Research F: Earth Surface (122) 1771-1793
Multibeam acoustic backscatter has considerable utility for remote characterization of spatially heterogeneous bed sediment composition over vegetated and unvegetated riverbeds of mixed sand and gravel. However, the use of high-frequency, decimeter-resolution acoustic backscatter for sediment classification in shallow water is hampered by significant topographic contamination of the signal. In mixed...
Isotopic characterization of late Neogene travertine deposits at Barrancas Blancas in the eastern Atacama Desert, Chile
J. Quade, E.T. Rasbury, K.W. Huntington, Adam M. Hudson, H. Vonhof, K. Anchukaitis, Julio L. Betancourt, C. Latorre, M. Pepper
2017, Chemical Geology (466) 41-56
Here we explore the potential of spring-related, surface and subsurface carbonates as an archive of paleoenvironmental change at Barrancas Blancas, located in the broadest and driest sector of the Atacama Desert at 24.5°S. From these deposits we present a new stable isotopic record of paleoenvironmental conditions over portions of the...
A method for quantifying cloud immersion in a tropical mountain forest using time-lapse photography
Maoya Bassiouni, Martha A. Scholl, Angel J. Torres-Sanchez, Sheila F. Murphy
2017, Agricultural and Forest Meteorology (243) 100-112
Quantifying the frequency, duration, and elevation range of fog or cloud immersion is essential to estimate cloud water deposition in water budgets and to understand the ecohydrology of cloud forests. The goal of this study was to develop a low-cost and high spatial-coverage method to detect occurrence of cloud immersion...
Harvesting wildlife affected by climate change: a modelling and management approach for polar bears
Eric V. Regehr, Ryan H. Wilson, Karyn D. Rode, Michael C. Runge, Harry Stern
2017, Journal of Applied Ecology (54) 1534-1543
The conservation of many wildlife species requires understanding the demographic effects of climate change, including interactions between climate change and harvest, which can provide cultural, nutritional or economic value to humans.We present a demographic model that is based on the polar bear Ursus maritimus life cycle and includes density-dependent...
Restricted gene flow between resident Oncorhynchus mykiss and an admixed population of anadromous steelhead
Andrew P. Matala, Brady Allen, Shawn R. Narum, Elaine Harvey
2017, Ecology and Evolution (7) 8349-8362
The species Oncorhynchus mykiss is characterized by a complex life history that presents a significant challenge for population monitoring and conservation management. Many factors contribute to genetic variation in O. mykiss populations, including sympatry among migratory phenotypes, habitat heterogeneity, hatchery introgression, and immigration (stray) rates. The relative influences of these and other factors are contingent...
Role of a naturally varying flow regime in Everglades restoration
Judson Harvey, Paul R. Wetzel, Thomas E. Lodge, Victor C. Engel, Michael S. Ross
2017, Restoration Ecology (25) S27-S38
The Everglades is a low-gradient floodplain predominantly on organic soil that undergoes seasonally pulsing sheetflow through a network of deepwater sloughs separated by slightly higher elevation ridges. The seasonally pulsing flow permitted the coexistence of ridge and slough vegetation, including the persistence of productive, well-connected sloughs that seasonally concentrated prey...
Influence of precipitation and crop germination on resource selection by mule deer (Odocoileus hemionus) in southwest Colorado
Emily M. Carrollo, Heather E. Johnson, Justin W. Fischer, Matthew Hammond, Patricia D. Dorsey, Charles Anderson, Kurt C. Vercauteren, W. David Walter
2017, Scientific Reports (7) 1-9
Mule deer (Odocoileus hemionus) populations in the western United States provide many benefits to local economies but can also cause considerable damage to agriculture, particularly damage to lucrative crops. Limited information exists to understand resource selection of mule deer in response to annual variation in crop rotation and climatic conditions....
Prey partitioning and use of insects by juvenile sockeye salmon and a potential competitor, threespine stickleback, in Afognak Lake, Alaska
Natura Richardson, Anne H. Beaudreau, Mark S. Wipfli, Heather Finkle
2017, Ecology of Freshwater Fish (26) 586-601
Freshwater growth of juvenile sockeye salmon (Oncorhynchus nerka) depends upon the quality and quantity of prey and interactions with potential competitors in the foraging environment. To a large extent, knowledge about the ecology of lake-rearing juvenile sockeye salmon has emerged from studies of commercially important runs returning to deep nursery...
Enhancing hatch rate and survival in laboratory-reared hybrid Devils Hole Pupfish through application of antibiotics to eggs and larvae
Olin Feuerbacher, Scott A. Bonar, Paul J. Barrett
2017, North American Journal of Aquaculture (79) 106-114
We evaluated the effectiveness of four antibiotics in enhancing the hatch rate, larval survival, and adult survival of hybrid Devils Hole Pupfish Cyprinodon diabolis (hybridized with Ash Meadows Amargosa Pupfish C. nevadensis mionectes). Cephalexin (CEX; concentration = 6.6 mg/L of water), chloramphenicol (CAM; 50 mg/L), erythromycin (ERY; 12.5 mg/L), and trimethoprim sulfamethoxazole (TMP-SMX;...
Shifts in an invasive rodent community favoring black rats (Rattus rattus) following restoration of native forest
Aaron B. Shiels, Arthur C. Medeiros, Erica I. von Allmen
2017, Restoration Ecology (25) 759-767
One potential, unintended ecological consequence accompanying forest restoration is a shift in invasive animal populations, potentially impacting conservation targets. Eighteen years after initial restoration (ungulate exclusion, invasive plant control, and out planting native species) at a 4 ha site on Maui, Hawai'i, we compared invasive rodent communities in a restored native...
A fault‐based model for crustal deformation in the western United States based on a combined inversion of GPS and geologic inputs
Yuehua Zeng, Zheng-Kang Shen
2017, Bulletin of the Seismological Society of America (107) 2597-2612
We develop a crustal deformation model to determine fault‐slip rates for the western United States (WUS) using the Zeng and Shen (2014) method that is based on a combined inversion of Global Positioning System (GPS) velocities and geological slip‐rate constraints. The model consists of six blocks with...
Resilience in ecotoxicology: Toward a multiple equilibrium concept
Mirco Bundschuh, Ralf Schulz, Craig R. Allen, David G. Angeler
2017, Environmental Toxicology and Chemistry (36) 2574-2580
The term resilience describes stress–response patterns across scientific disciplines. In ecology, advances have been made to clearly define resilience based on underlying mechanistic assumptions. Engineering resilience (rebound) is used to describe the ability of organisms to recover from adverse conditions (disturbances), which is termed the rate of recovery. By contrast,...
Groundwater declines are linked to changes in Great Plains stream fish assemblages
Joshuah S. Prekins, Keith B. Gido, Jeffrey A. Falke, Kurt D. Fausch, Harry Crockett, Eric R. Johnson, John Sanderson
2017, Proceedings of the National Academy of Sciences of the United States of America (114) 7373-7378
Groundwater pumping for agriculture is a major driver causing declines of global freshwater ecosystems, yet the ecological consequences for stream fish assemblages are rarely quantified. We combined retrospective (1950–2010) and prospective (2011–2060) modeling approaches within a multiscale framework to predict change in Great Plains stream fish assemblages associated with groundwater...
CWDPRNP: A tool for cervid prion sequence analysis in program R
William L. Miller, W. David Walter
2017, Bioinformatics (33) 3096-3097
Chronic wasting disease is a fatal, neurological disease caused by an infectious prion protein, which affects economically and ecologically important members of the family Cervidae. Single nucleotide polymorphisms within the prion protein gene have been linked to differential susceptibility to the disease in many species. Wildlife managers are seeking to...
Estimating Mudpuppy (Necturus maculosus) abundance in the Lamoille River, Vermont, USA
Isaac C. Chellman, Donna L. Parrish, Therese M. Donovan
2017, Herpetological Conservation and Biology (12) 422-434
The Mudpuppy (Necturus maculosus) is classified as a Species of Greatest Conservation Need by the state of Vermont. There is concern regarding status of populations in the Lake Champlain basin because of habitat alteration and potential effects of 3-trifluromethyl-4-nitrophenol (TFM), a chemical used to control Sea Lamprey (Petromyzon marinus). The...
Development of a foraging model framework to reliably estimate daily food consumption by young fishes
David Deslauriers, Alex J. Rosburg, Steven R. Chipps
2017, Canadian Journal of Fisheries and Aquatic Sciences (74) 1668-1681
We developed a foraging model for young fishes that incorporates handling and digestion rate to estimate daily food consumption. Feeding trials were used to quantify functional feeding response, satiation, and gut evacuation rate. Once parameterized, the foraging model was then applied to evaluate effects of prey type, prey density, water...
Regime shifts and panarchies in regional scale social-ecological water systems
Lance Gunderson, Barbara Cosens, Brian C. Chaffin, Craig Anthony Arnold, Alexander K. Fremier, Ahjond S. Garmestani, Robin Kundis Craig, Hannah Gosnell, Hannah E. Birge, Craig R. Allen, Melinda H. Benson, Ryan R. Morrison, Mark Stone, Joseph A. Hamm, Kristine T. Nemec, Edella Schlager, Dagmar Llewellyn
2017, Ecology and Society (22) 1-12
In this article we summarize histories of nonlinear, complex interactions among societal, legal, and ecosystem dynamics in six North American water basins, as they respond to changing climate. These case studies were chosen to explore the conditions for emergence of adaptive governance in heavily regulated and developed social-ecological systems...