Seasonal and diel environmental conditions predict western pond turtle (Emys marmorata) behavior at a perennial and an ephemeral stream in Sequoia National Park, California
Gabrielle Ruso, Erik Meyer, Adrian J. Das
2017, Chelonian Conservation and Biology (16) 20-28
Managers making decisions may benefit from a well-informed understanding of a species' population size and trends. Given the cryptic nature and habitat characteristics of the western pond turtle (Emys marmorata), however, imperfect detection may be high and population estimates are frequently varied and unreliable. As a case study to investigate...
Addressing wild turkey population declines using structured decision making
Kelly F. Robinson, Angela K. Fuller, Michael V. Schiavone, Bryan L. Swift, Duane R. Diefenbach, William F. Siemer, Daniel J. Decker
2017, Journal of Wildlife Management (81) 393-405
We present a case study from New York, USA, of the use of structured decision making (SDM) to identify fall turkey harvest regulations that best meet stakeholder objectives, in light of recent apparent declines in abundance of wild turkeys in the northeastern United States. We used the SDM framework to...
Lambdapapillomavirus 2 in a gray wolf (Canis lupus) from Minnesota with oral papillomatosis and sarcoptic mange
Susan Knowles, Steve K. Windels, Marie Adams, Jeffrey S. Hall
2017, Journal of Wildlife Diseases (53) 925-929
Oral papillomatosis was diagnosed in a gray wolf (Canis lupus) with sarcoptic mange from Minnesota, USA found dead in February 2015. Intranuclear inclusion bodies were evident histologically, and papillomaviral antigens were confirmed using immunohistochemistry. Sequencing of the L1 papillomavirus gene showed closest similarity to Lambdapapillomavirus 2....
Transcriptional response to West Nile virus infection in the zebra finch (Taeniopygia guttata)
Daniel J. Newhouse, Erik K. Hofmeister, Christopher N. Balakrishnan
2017, Royal Society Open Science (4) 1-12
West Nile virus (WNV) is a widespread arbovirus that imposes a significant cost to both human and wildlife health. WNV exists in a bird-mosquito transmission cycle in which passerine birds act as the primary reservoir host. As a public health concern, the mammalian immune response to WNV has been studied...
Hydrogeologic framework and selected components of the groundwater budget for the upper Umatilla River Basin, Oregon
Nora B. Herrera, Kate Ely, Smita Mehta, Adam J. Stonewall, John C. Risley, Stephen R. Hinkle, Terrence D. Conlon
2017, Scientific Investigations Report 2017-5020
Executive SummaryThis report presents a summary of the hydrogeology of the upper Umatilla River Basin, Oregon, based on characterization of the hydrogeologic framework, horizontal and vertical directions of groundwater flow, trends in groundwater levels, and components of the groundwater budget. The conceptual model of the groundwater flow system integrates available...
Conservation, biodiversity and infectious disease: scientific evidence and policy implications
Hillary S. Young, Chelsea L. Wood, A. Marm Kilpatrick, Kevin D. Lafferty, Charles L. Nunn, Jeffrey R. Vincent
2017, Philosophical Transactions of the Royal Society B: Biological Sciences (372) 1-4
Habitat destruction and infectious disease are dual threats to nature and people. The potential to simultaneously advance conservation and human health has attracted considerable scientific and popular interest; in particular, many authors have justified conservation action by pointing out potential public health benefits . One major focus of this...
Potential for water borne and invertebrate transmission of West Nile virus in the Great Salt Lake, Utah
Melissa Lund, Valerie I. Shearn-Bochsler, Robert J. Dusek, Jan Shivers, Erik K. Hofmeister
2017, Applied and Environmental Microbiology (83)
In November and December of 2013, a large mortality event involving 15,000 - 20,000 eared grebes (Podiceps nigricollis) occurred at the Great Salt Lake (GSL), UT. The onset of the outbreak in grebes was followed by a mortality event in > 86 bald eagles (Haliaeetus leucocephalus). During the die-off, West...
Responses of juvenile black-tailed prairie dogs (Cynomys ludovicianus) to a commercially produced oral plague vaccine delivered at two doses
Elsa M. Cardenas-Canales, Lisa L. Wolfe, Tripp. Daniel W., Tonie E. Rocke, Rachel C. Abbott, Michael W. Miller
2017, Journal of Wildlife Diseases (53) 916-920
We confirmed safety and immunogenicity of mass-produced vaccine baits carrying an experimental, commercial-source plague vaccine (RCN-F1/V307) expressing Yersinia pestis V and F1 antigens. Forty-five juvenile black-tailed prairie dogs (Cynomys ludovicianus) were randomly divided into three treatment groups (n=15 animals/group). Animals in the first group received one standard-dose vaccine bait (5×107...
Predation of freshwater fish in environments with elevated carbon dioxide
Stephen R. Midway, Caleb T. Hasler, Tyler Wagner, C. D. Suski
2017, Marine and Freshwater Research (68) 1585-1592
Carbon dioxide (CO2) in fresh-water environments is poorly understood, yet in marine environments CO2 can affect fish behaviour, including predator–prey relationships. To examine changes in predator success in elevated CO2, we experimented with predatory Micropterus salmoides and Pimephales promelas prey. We used a two-factor fully crossed experimental design; one factor...
A mosaic-based approach is needed to conserve biodiversity in disturbed freshwater ecosystems
Sean M. Hitchman, Martha E. Mather, Joseph M. Smith, Jane S. Fencl
2017, Global Change Biology (24) 308-321
Conserving native biodiversity in the face of human‐ and climate‐related impacts is a challenging and globally important ecological problem that requires an understanding of spatially connected, organismal‐habitat relationships. Globally, a suite of disturbances (e.g., agriculture, urbanization, climate change) degrades habitats and threatens biodiversity. A mosaic approach (in which connected, interacting...
Water temperature effects from simulated changes to dam operations and structures in the Middle and South Santiam Rivers, Oregon
Norman L. Buccola
2017, Open-File Report 2017-1063
Green Peter and Foster Dams on the Middle and South Santiam Rivers, Oregon, have altered the annual downstream water temperature profile (cycle). Operation of the dams has resulted in cooler summer releases and warmer autumn releases relative to pre-dam conditions, and that alteration can hinder recovery of various life...
Spectral matching techniques (SMTs) and automated cropland classification algorithms (ACCAs) for mapping croplands of Australia using MODIS 250-m time-series (2000–2015) data
Pardhasaradhi G. Teluguntla, Prasad S. Thenkabail, Jun Xiong, Murali Krishna Gumma, Russell G. Congalton, Adam Oliphant, Justin Poehnelt, Kamini Yadav, Mahesh N. Rao, Richard Massey
2017, International Journal of Digital Earth (10) 944-977
Mapping croplands, including fallow areas, are an important measure to determine the quantity of food that is produced, where they are produced, and when they are produced (e.g. seasonality). Furthermore, croplands are known as water guzzlers by consuming anywhere between 70% and 90% of all human water use globally. Given...
Assessment of undiscovered oil and gas resources in the Spraberry Formation of the Midland Basin, Permian Basin Province, Texas, 2017
Kristen R. Marra, Stephanie B. Gaswirth, Christopher J. Schenk, Heidi M. Leathers-Miller, Timothy R. Klett, Tracey J. Mercier, Phuong A. Le, Marilyn E. Tennyson, Thomas M. Finn, Sarah J. Hawkins, Michael E. Brownfield
2017, Fact Sheet 2017-3029
Using a geology-based assessment methodology, the U.S. Geological Survey estimated mean resources of 4.2 billion barrels of oil and 3.1 trillion cubic feet of gas in the Spraberry Formation of the Midland Basin, Permian Basin Province, Texas....
An accurate method for measuring triploidy of larval fish spawns
Jill A. Jenkins, Rassa O. Draugelis-Dale, Robert Glennon, Anita M. Kelly, Bonnie L. Brown, John Morrison
2017, North American Journal of Aquaculture (79) 224-237
A standard flow cytometric protocol was developed for estimating triploid induction in batches of larval fish. Polyploid induction treatments are not guaranteed to be 100% efficient, thus the ability to quantify the proportion of triploid larvae generated by a particular treatment helps managers to stock high-percentage spawns and researchers to...
Measuring surface-water loss in Honouliuli Stream near the ‘Ewa Shaft, O‘ahu, Hawai‘i
Sarah N. Rosa
2017, Scientific Investigations Report 2017-5042
The Honolulu Board of Water Supply is currently concerned with the possibility of bacteria in the pumped water of the ‘Ewa Shaft (State well 3-2202-21). Groundwater from the ‘Ewa Shaft could potentially be used to meet future potable water needs in the ‘Ewa area on the island of O‘ahu. The...
Delineation of marsh types and marsh-type change in coastal Louisiana for 2007 and 2013
Stephen B. Hartley, Brady R. Couvillion, Nicholas M. Enwright
2017, Scientific Investigations Report 2017-5044
The Bureau of Ocean Energy Management researchers often require detailed information regarding emergent marsh vegetation types (such as fresh, intermediate, brackish, and saline) for modeling habitat capacities and mitigation. In response, the U.S. Geological Survey in cooperation with the Bureau of Ocean Energy Management produced a detailed change classification of...
A long-term copper exposure in a freshwater ecosystem using lotic mesocosms: Invertebrate community responses
Sandrine Joachim, Helene Roussel, Jean-Marc Bonzom, Eric Thybaud, Christopher A. Mebane, Paul Van den Brink, Laury Gauthier
2017, Environmental Toxicology and Chemistry (36) 2698-2714
A lotic mesocosm study was carried out in 20-m-long channels, under continuous, environmentally realistic concentrations of copper (Cu) in low, medium, and high exposures (nominally 0, 5, 25, and 75 μg L−1; average effective concentrations <0.5, 4, 20, and 57 μg L−1 respectively) for 18 mo. Total abundance, taxa richness, and community structure of zooplankton, macroinvertebrates,...
Steady state fractionation of heavy noble gas isotopes in a deep unsaturated zone
Alan M. Seltzer, Jeffrey P. Severinghaus, Brian J. Andraski, David A. Stonestrom
2017, Water Resources Research (53) 2716-2732
To explore steady state fractionation processes in the unsaturated zone (UZ), we measured argon, krypton, and xenon isotope ratios throughout a ∼110 m deep UZ at the United States Geological Survey (USGS) Amargosa Desert Research Site (ADRS) in Nevada, USA. Prior work has suggested that gravitational settling should create a...
Relationships between gas field development and the presence and abundance of pygmy rabbits in southwestern Wyoming
Stephen S. Germaine, Sarah K. Carter, Drew A. Ignizio, Aaron T. Freeman
2017, Ecosphere (8)
More than 5957 km2 in southwestern Wyoming is currently covered by operational gas fields, and further development is projected through 2030. Gas fields fragment landscapes through conversion of native vegetation to roads, well pads, pipeline corridors, and other infrastructure elements. The sagebrush steppe landscape where most of this development is occurring...
Sedimentological and petrographic analysis of drill core FC77-1 from the flank of the central uplift, Flynn Creek impact structure, Tennessee
D. R. Adrian, D. T. King, S. J. Jaret, J. Ormo, L. W. Petruny, Justin Hagerty, Tenielle Gaither
2017, Meteoritics & Planetary Science (MAPS) (53) 857-873
Drill core FC 77‐1 on the flank of the central uplift, Flynn Creek impact structure, Tennessee, contains 175 m of impact breccia lying upon uplifted Lower Paleozoic carbonate target stratigraphy. Sedimentological analysis of this 175‐m interval carbonate breccia shows that there are three distinct sedimentological units. In stratigraphic...
Doubling of coastal flooding frequency within decades due to sea-level rise
Sean Vitousek, Patrick L. Barnard, Charles H. Fletcher, Neil Frazer, Li H. Erikson, Curt D. Storlazzi
2017, Scientific Reports (7) 1-9
Global climate change drives sea-level rise, increasing the frequency of coastal flooding. In most coastal regions, the amount of sea-level rise occurring over years to decades is significantly smaller than normal ocean-level fluctuations caused by tides, waves, and storm surge. However, even gradual sea-level rise can rapidly increase the frequency...
Trends in Rainbow Trout recruitment, abundance, survival, and growth during a boom-and-bust cycle in a tailwater fishery
Josh Korman, Micheal D. Yard, Theodore A. Kennedy
2017, Transactions of the American Fisheries Society (146) 1043-1057
Data from a large-scale mark-recapture study was used in an open population model to determine the cause for long-term trends in growth and abundance of a Rainbow Trout Oncorhynchus mykiss population in the tailwater of Glen Canyon Dam, AZ. Reduced growth affected multiple life stages and processes causing negative feedbacks...
Declines in low-elevation subalpine tree populations outpace growth in high-elevation populations with warming
Erin Conlisk, Cristina Castanha, Matthew J. Germino, Thomas T. Veblen, Jeremy M. Smith, Lara M. Kueppers
2017, Journal of Ecology (105) 1347-1357
Species distribution shifts in response to climate change require that recruitment increase beyond current range boundaries. For trees with long life spans, the importance of climate-sensitive seedling establishment to the pace of range shifts has not been demonstrated quantitatively.Using spatially explicit, stochastic population models combined with data...
Land use history and population dynamics of free-standing figs in a maturing forest
Larissa Albrecht, Robert F. Stallard, Elisabeth Kalko
2017, PLoS ONE (12) 1-18
Figs (Ficus sp.) are often considered as keystone resources which strongly influence tropical forest ecosystems. We used long-term tree-census data to track the population dynamics of two abundant free-standing fig species, Ficus insipida and F. yoponensis, on Barro Colorado Island (BCI), a 15.6-km2 island in Lake Gatún, Panama. Vegetation cover...
Can beaches survive climate change?
Sean Vitousek, Patrick L. Barnard, Patrick W. Limber
2017, Journal of Geophysical Research F: Earth Surface (122) 1060-1067
Anthropogenic climate change is driving sea level rise, leading to numerous impacts on the coastal zone, such as increased coastal flooding, beach erosion, cliff failure, saltwater intrusion in aquifers, and groundwater inundation. Many beaches around the world are currently experiencing chronic erosion as a result of gradual, present-day rates of...