Environmental DNA mapping of Zebra Mussel populations
Jon Amberg, Christopher M. Merkes
2016, Report
Environmental DNA (eDNA) has become a popular tool for detecting aquatic invasive species, but advancements have made it possible to potentially answer other questions like reproduction, movement, and abundance of the targeted organism. In this study we developed a Zebra Mussel (Dreissena polymorpha) eDNA protocol. We then determined if this...
Network global navigation satellite system survey to harmonize water-surface elevation data for the Rainy River Basin
Jeffrey R. Ziegeweid, R. Jason Silliker, Brenda K. Densmore, Justin Krahulik
2016, Scientific Investigations Report 2016-5109
Continuously recording water-level streamgages in Rainy Lake and Namakan Reservoir are used to regulate water levels according to rule curves established in 2000 by the International Joint Commission; however, water levels at streamgages were referenced to a variety of vertical datums, confounding efforts to model the flow of water through...
The sensitivity of WRF downscaled precipitation in Puerto Rico to cumulus parameterization and interior grid nudging
A. Wootten, J.H. Bowden, R. Boyles, Adam J. Terando
2016, Journal of Applied Meteorology and Climatology (55) 2263-2281
The sensitivity of the Weather Research and Forecasting Model (WRF) simulated precipitation over Puerto Rico is evaluated using multiple combinations of cumulus parameterization (CP) schemes and interior grid nudging. NCEP-DOE AMIP-II reanalysis (R-2) is downscaled to 2- km horizontal grid spacing with both convective permitting simulations (CP active only in the 49...
Geomorphological control on variably saturated hillslope hydrology and slope instability
Formetta Giuseppe, Silvia Simoni, Jonathan W. Godt, Ning Lu, Riccardo Rigon
2016, Water Resources Research (52) 4590-4607
In steep topography, the processes governing variably saturated subsurface hydrologic response and the interparticle stresses leading to shallow landslide initiation are physically linked. However, these processes are usually analyzed separately. Here, we take a combined approach, simultaneously analyzing the influence of topography on both hillslope hydrology and the effective stress...
Keeping things local: Subpopulation Nb and Ne in a stream network with partial barriers to fish migration
AR Whiteley, JA Coombs, Matthew O’Donnell, KH Nislow, Benjamin Letcher
2016, Evolutionary Applications (10) 348-365
For organisms with overlapping generations that occur in metapopulations, uncertainty remains regarding the spatiotemporal scale of inference of estimates of the effective number of breeders () and whether these estimates can be used to predict generational Ne. We conducted a series of tests of the spatiotemporal scale...
Predation on Chinook Salmon parr by hatchery salmonids and Fallfish in the Salmon River, New York
James H. Johnson, Christopher C. Nack, Marc Chalupnicki, Ross Abbett, James E. McKenna Jr.
2016, North American Journal of Fisheries Management (36) 74-84
Naturally reproduced Chinook Salmon Oncorhynchus tshawytscha contribute substantially to the fishery in Lake Ontario. The Salmon River, a Lake Ontario tributary in New York, produces the largest numbers of naturally spawned Chinook Salmon, with parr abundance in the river often exceeding 10 million. In the spring of each year, large numbers of...
Divergent projections of future land use in the United States arising from different models and scenarios
Terry L. Sohl, Michael Wimberly, Volker C. Radeloff, David M. Theobald, Benjamin M. Sleeter
2016, Ecological Modelling (337) 281-297
A variety of land-use and land-cover (LULC) models operating at scales from local to global have been developed in recent years, including a number of models that provide spatially explicit, multi-class LULC projections for the conterminous United States. This diversity of modeling approaches raises the question: how consistent are their...
Diversity of fungal endophytes in non-native Phragmites australis in the Great Lakes
Keith Clay, Zachery Shearin, Kimberly Bourke, Wesley A. Bickford, Kurt P. Kowalski
2016, Biological Invasions (18) 2703-2716
Plant–microbial interactions may play a key role in plant invasions. One common microbial interaction takes place between plants and fungal endophytes when fungi asymptomatically colonize host plant tissues. The objectives of this study were to isolate and sequence fungal endophytes colonizing non-native Phragmites australis in the Great Lakes...
Applying the collective impact approach to address non-native species: A case study of the Great Lakes Phragmites Collaborative
H. B. Braun, Kurt P. Kowalski, K. Hollins
2016, Biological Invasions (18) 2729-2738
To address the invasion of non-native Phragmites in the Great Lakes, researchers at the U.S. Geological Survey—Great Lakes Science Center partnered with the Great Lakes Commission in 2012 to establish the Great Lakes Phragmites Collaborative (GLPC). The GLPC is a regional-scale partnership established to improve collaboration among stakeholders and increase...
Habituation of adult sea lamprey repeatedly exposed to damage-released alarm and predator cues
Istvan Imre, Richard T. Di Rocco, Grant E. Brown, Nicholas S. Johnson
2016, Environmental Biology of Fishes (99) 613-620
Predation is an unforgiving selective pressure affecting the life history, morphology and behaviour of prey organisms. Selection should favour organisms that have the ability to correctly assess the information content of alarm cues. This study investigated whether adult sea lamprey Petromyzon marinus habituate to conspecific damage-released alarm cues (fresh and...
A long-term evaluation of biopsy darts and DNA to estimate cougar density
Richard A. Beausoleil, Joseph D. Clark, Benjamin T. Maletzke
2016, Wildlife Society Bulletin (40) 583-592
Accurately estimating cougar (Puma concolor) density is usually based on long-term research consisting of intensive capture and Global Positioning System collaring efforts and may cost hundreds of thousands of dollars annually. Because wildlife agency budgets rarely accommodate this approach, most infer cougar density from published literature, rely on short-term studies,...
Droughts may increase susceptibility of prairie dogs to fleas: Incongruity with hypothesized mechanisms of plague cycles in rodents
David A. Eads, Dean E. Biggins, Dustin H. Long, Kenneth L. Gage, Michael F. Antolin
2016, Journal of Mammalogy (97) 1044-1053
Plague is a reemerging, rodent-associated zoonosis caused by the flea-borne bacterium Yersinia pestis. As a vector-borne disease, rates of plague transmission may increase when fleas are abundant. Fleas are highly susceptible to desiccation under hot-dry conditions; we posited that their densities decline during droughts. We evaluated this hypothesis with black-tailed prairie...
Retrospective: Adjusting contaminant concentrations in bird eggs to account for moisture and lipid Loss during their incubation
Barnett A. Rattner, Stanley N. Wiemeyer, Lawrence J. Blus
2016, Bulletin of Environmental Contamination and Toxicology (97) 2-3
By the 1960s, research and monitoring efforts on chlorinated pesticide residues in tissues of wildlife were well underway in North America and Europe. Conservationists and natural resource managers were attempting to resolve whether pesticide exposure and accumulated residues were related to population declines in several species of predatory and scavenging...
A review and synthesis of recreation ecology research supporting carrying capacity and visitor use management decisionmaking
Jeffrey L. Marion
2016, Journal of Forestry (114) 339-351
Resource and experiential impacts associated with visitation to wilderness and other similar backcountry settings have long been addressed by land managers under the context of “carrying capacity” decisionmaking. Determining a maximum level of allowable use, below which high-quality resource and experiential conditions would be sustained, was an early focus in...
A review and synthesis of recreation ecology research findings on visitor impacts to wilderness and protected natural areas
Jeffrey L. Marion, Yu-Fai Leung, Holly Eagleston, Kaitlin Burroughs
2016, Journal of Forestry (114) 352-362
The 50th anniversary of the US Wilderness Act of 1964 presents a worthy opportunity to review our collective knowledge on how recreation visitation affects wilderness and protected natural area resources. Studies of recreation impacts, examined within the recreation ecology field of study, have spanned 80 years and generated more than 1,200 citations....
Functional role of bacteria from invasive Phragmites australis in promotion of host growth
M. A. Soares, H-Y Li, Kurt P. Kowalski, M. Bergen, M. S. Torres, J. F. White
2016, Microbial Ecology (72) 407-417
We hypothesize that bacterial endophytes may enhance the competitiveness and invasiveness of Phragmites australis. To evaluate this hypothesis, endophytic bacteria were isolated from P. australis. The majority of the shoot meristem isolates represent species from phyla Firmicutes, Proteobacteria, and Actinobacteria. We chose one species from each phylum to characterize further...
Potential postwildfire debris-flow hazards—A prewildfire evaluation for the Jemez Mountains, north-central New Mexico
Anne C. Tillery, Jessica R. Haas
2016, Scientific Investigations Report 2016-5101
Wildfire can substantially increase the probability of debris flows, a potentially hazardous and destructive form of mass wasting, in landscapes that have otherwise been stable throughout recent history. Although the exact location, extent, and severity of wildfire or subsequent rainfall intensity and duration cannot be known, probabilities of fire and...
Beach nourishment alternative assessment to constrain cross-shore and longshore sediment transport
Servet Karasu, Paul A. Work, Ergun Uzlu, Murat Kankal, Omer Yuksek
2016, Applied Ocean Research (59) 459-471
A combined field and laboratory investigation was conducted to assess five options for creation of a recreational beach on a steep, armored shoreline on the eastern Black Sea coast. All designs incorporated a beach nourishment project placed between two existing, shore-normal, rubble-mound groins. Alternatives included the placement of a nearshore...
Pathway-based approaches for assessment of real-time exposure to an estrogenic wastewater treatment plant effluent on fathead minnow reproduction
Jenna E. Cavallin, Kathleen M. Jensen, Michael D. Kahl, Daniel L. Villeneuve, Kathy Lee, Anthony L. Schroeder, Joe Mayasich, Evan P. Eid, Krysta R. Nelson, Rebecca Y. Milsk, Brett R. Blackwell, Jason P. Berninger, Carlie A. LaLone, Chad Blanskma, Terri M. Jicha, Colleen M. Elonen, Rodney C. Johnson, Gerald T. Ankley
2016, Environmental Toxicology and Chemistry (35) 702-716
Wastewater treatment plant (WWTP) effluents are known contributors of chemical mixtures into the environment. Of particular concern are endocrine-disrupting compounds, such as estrogens, which can affect the hypothalamic-pituitary-gonadal axis function in exposed organisms. The present study examined reproductive effects in fathead minnows exposed for 21 d to a historically estrogenic...
Macroinvertebrate community sample collection methods and data collected from Sand Creek and Medano Creek, Great Sand Dunes National Park and Preserve, Colorado, 2005–07
Morgan A. Ford, Robert E. Zuellig, David M. Walters, James F. Bruce
2016, Data Series 1012
This report provides a table of site descriptions, sample information, and semiquantitative aquatic macroinvertebrate data from 105 samples collected between 2005 and 2007 from 7 stream sites within the Sand Creek and Medano Creek watersheds in Great Sand Dunes National Park and Preserve, Saguache County, Colorado. Additionally, a short description...
Ecosystem vulnerability to climate change in the southeastern United States
Jennifer M. Cartwright, Jennifer Costanza
2016, Fact Sheet 2016-3052
Two recent investigations of climate-change vulnerability for 19 terrestrial, aquatic, riparian, and coastal ecosystems of the southeastern United States have identified a number of important considerations, including potential for changes in hydrology, disturbance regimes, and interspecies interactions. Complementary approaches using geospatial analysis and literature synthesis integrated information on ecosystem biogeography...
Insular ecosystems of the southeastern United States—A regional synthesis to support biodiversity conservation in a changing climate
Jennifer M. Cartwright, William J. Wolfe
2016, Professional Paper 1828
In the southeastern United States, insular ecosystems—such as rock outcrops, depression wetlands, high-elevation balds, flood-scoured riparian corridors, and insular prairies and barrens—occupy a small fraction of land area but constitute an important source of regional and global biodiversity, including concentrations of rare and endemic plant taxa. Maintenance of this biodiversity...
Assessing climate-sensitive ecosystems in the southeastern United States
Jennifer Costanza, Scott Beck, Milo Pyne, Adam Terando, Matthew J. Rubino, Rickie White, Jaime Collazo
2016, Open-File Report 2016-1073
Climate change impacts ecosystems in many ways, from effects on species to phenology to wildfire dynamics. Assessing the potential vulnerability of ecosystems to future changes in climate is an important first step in prioritizing and planning for conservation. Although assessments of climate change vulnerability commonly are done for species, fewer...
Relations between continuous real-time physical properties and discrete water-quality constituents in the Little Arkansas River, south-central Kansas, 1998-2014
Patrick P. Rasmussen, Patrick J. Eslick, Andrew C. Ziegler
2016, Open-File Report 2016-1057
Water from the Little Arkansas River is used as source water for artificial recharge of the Equus Beds aquifer, one of the primary water-supply sources for the city of Wichita, Kansas. The U.S. Geological Survey has operated two continuous real-time water-quality monitoring stations since 1995 on the Little Arkansas River...
2014 annual summary of the lower Gunnison River Basin Selenium Management Program water-quality monitoring, Colorado
Mark F. Henneberg
2016, Open-File Report 2016-1129
Dissolved-selenium loading analyses of data collected at 18 water-quality sites in the lower Gunnison River Basin in Colorado were completed through water year (WY) 2014. A WY is defined as October 1–September 30. Selenium is a trace element that bioaccumulates in aquatic food chains and can cause reproductive failure, deformities,...