Bacterial community diversity of the deep-sea octocoral Paramuricea placomus
Christina A. Kellogg, Steve W. Ross, Sandra D. Brooke
2016, PeerJ (4)
Compared to tropical corals, much less is known about deep-sea coral biology and ecology. Although the microbial communities of some deep-sea corals have been described, this is the first study to characterize the bacterial community associated with the deep-sea octocoral, Paramuricea placomus. Samples from five colonies of P. placomus were...
Near-real-time cheatgrass percent cover in the Northern Great Basin, USA, 2015
Stephen P. Boyte, Bruce K. Wylie
2016, Rangelands (38) 278-284
Cheatgrass (Bromus tectorum L.) dramatically changes shrub steppe ecosystems in the Northern Great Basin, United States.Current-season cheatgrass location and percent cover are difficult to estimate rapidly.We explain the development of a near-real-time cheatgrass percent cover dataset and map in the Northern Great Basin for the current year (2015), display the...
Variation of organic matter quantity and quality in streams at Critical Zone Observatory watersheds
Matthew P. Miller, Elizabeth W. Boyer, Diane M. McKnight, Michael G. Brown, Rachel S. Gabor, Carolyn T. Hunsaker, Lidiia Iavorivska, Shreeram Inamdar, Louis A. Kaplan, Dale W. Johnson, Henry Lin, William H. McDowell, Julia N. Perdrial
2016, Water Resources Research (52) 8202-8216
The quantity and chemical composition of dissolved organic matter (DOM) in surface waters influence ecosystem processes and anthropogenic use of freshwater. However, despite the importance of understanding spatial and temporal patterns in DOM, measures of DOM quality are not routinely included as part of large-scale ecosystem monitoring programs and variations...
Scaling relation between earthquake magnitude and the departure time from P wave similar growth
Shunta Noda, William L. Ellsworth
2016, Geophysical Research Letters (43) 9053-9060
We introduce a new scaling relation between earthquake magnitude (M) and a characteristic of initial P wave displacement. By examining Japanese K-NET data averaged in bins partitioned by Mw and hypocentral distance, we demonstrate that the P wave displacement briefly displays similar growth at the onset of rupture and that the...
Cultivation of a native alga for biomass and biofuel accumulation in coal bed methane production water
Logan H. Hodgskiss, Justin Nagy, Elliott P. Barnhart, Alfred B. Cunningham, Matthew W. Fields
2016, Algal Research (19) 63-68
Coal bed methane (CBM) production has resulted in thousands of ponds in the Powder River Basin of low-quality water in a water-challenged region. A green alga isolate, PW95, was isolated from a CBM production pond, and analysis of a partial ribosomal gene sequence indicated the isolate belongs to the Chlorococcaceae...
Combining landscape variables and species traits can improve the utility of climate change vulnerability assessments
Christopher P. Nadeau, Angela K. Fuller
2016, Biological Conservation (202) 30-38
Conservation organizations worldwide are investing in climate change vulnerability assessments. Most vulnerability assessment methods focus on either landscape features or species traits that can affect a species vulnerability to climate change. However, landscape features and species traits likely interact to affect vulnerability. We compare a landscape-based assessment, a trait-based assessment,...
Seismic evidence of glacial-age river incision into the Tahaa barrier reef, French Polynesia
Michael Toomey, Jonathan D. Woodruff, Andrew D. Ashton, J. Taylor Perron
2016, Marine Geology (380) 284-289
Rivers have long been recognized for their ability to shape reef-bound volcanic islands. On the time-scale of glacial–interglacial sea-level cycles, fluvial incision of exposed barrier reef lagoons may compete with constructional coral growth to shape the coastal geomorphology of ocean islands. However, overprinting of Pleistocene landscapes by Holocene erosion or...
Consequences of changes in vegetation and snow cover for climate feedbacks in Alaska and northwest Canada
Eugénie S. Euskirchen, A. P. Bennett, Amy L. Breen, Helene Genet, Michael A. Lindgren, Tom Kurkowski, A. David McGuire, T. Scott Rupp
2016, Environmental Research Letters (11) 1-19
Changes in vegetation and snow cover may lead to feedbacks to climate through changes in surface albedo and energy fluxes between the land and atmosphere. In addition to these biogeophysical feedbacks, biogeochemical feedbacks associated with changes in carbon (C) storage in the vegetation and soils may also influence climate. Here,...
Efficacy of GPS cluster analysis for predicting carnivory sites of a wide-ranging omnivore: the American black bear
Sarah R. Kindschuh, James W. Cain III, David Daniel, Mark A. Peyton
2016, Ecosphere (7) 1-17
The capacity to describe and quantify predation by large carnivores expanded considerably with the advent of GPS technology. Analyzing clusters of GPS locations formed by carnivores facilitates the detection of predation events by identifying characteristics which distinguish predation sites. We present a performance assessment of GPS cluster analysis as applied...
How well are you teaching one of the most important biological concepts for humankind? A call to action
Scott A. Bonar, Deanna A. Fife, John S. Bonar
2016, The American Biology Teacher (78) 623-623
We represent several generations of biology educators – with teaching experiences beginning in the 1940s and continuing to the present, from elementary school to graduate-level programs. We find the vast array of subjects that biology teachers can now cover both thrilling and mind-boggling. Depending on the grade level, units...
Development of habitat suitability indices for the Candy Darter, with cross-scale validation across representative populations
Corey G. Dunn, Paul L. Angermeier
2016, Transactions of the American Fisheries Society (145) 1266-1281
Understanding relationships between habitat associations for individuals and habitat factors that limit populations is a primary challenge for managers of stream fishes. Although habitat use by individuals can provide insight into the adaptive significance of selected microhabitats, not all habitat parameters will be significant at the population level, particularly when...
Circumpolar distribution and carbon storage of thermokarst landscapes
David Olefeldt, S. Goswami, G. Grosse, D. Hayes, G. Hugelius, P. Kuhry, A. David McGuire, V.E. Romanovsky, A. B. K. Sannel, E.A.G. Schuur, M.R. Turetsky
2016, Nature Communications (7) 1-11
Thermokarst is the process whereby the thawing of ice-rich permafrost ground causes land subsidence, resulting in development of distinctive landforms. Accelerated thermokarst due to climate change will damage infrastructure, but also impact hydrology, ecology and biogeochemistry. Here, we present a circumpolar assessment of the distribution of thermokarst landscapes, defined as...
Laboratory evaluation of the Design Analysis Associates DAA H-3613i radar water-level sensor—Results of temperature, distance, and SDI-12 tests
Mark V. Carnley
2016, Open-File Report 2016-1124
The Design Analysis Associates (DAA) DAA H-3613i radar water-level sensor (DAA H-3613i), manufactured by Xylem Incorporated, was evaluated by the U.S. Geological Survey (USGS) Hydrologic Instrumentation Facility (HIF) for conformance to manufacturer’s accuracy specifications for measuring a distance throughout the sensor’s operating temperature range, for measuring distances from 3 to...
Preliminary geologic mapping of Cretaceous and Tertiary formations in the eastern part of the Little Snake River coal field, Carbon County, Wyoming
Jon E. Haacke, C. S. Venable Barclay, Robert D. Hettinger
2016, Open-File Report 2016-1170
In the 1970s and 1980s, C.S. Venable Barclay conducted geologic mapping of areas primarily underlain by Cretaceous coals in the eastern part of the Little Snake River coal field (LSR) in Carbon County, southwest Wyoming. With some exceptions, most of the mapping data were never published. Subsequently, after his retirement...
Assessing potential scour using the South Carolina bridge-scour envelope curves
Stephen T. Benedict, Toby D. Feaster, Andral W. Caldwell
2016, Fact Sheet 2016-3065
SummaryBridge-scour equations presented in the Federal Highway Administration Hydraulic Engineering Circular No. 18 reflect the current state-of-the practice for predicting scour at bridges. Although these laboratory-derived equations provide an important resource for assessing scour potential, there is a measure of uncertainty when applying these equations to field conditions. The uncertainty...
Benthic processes affecting contaminant transport in Upper Klamath Lake, Oregon
James S. Kuwabara, Brent R. Topping, James L. Carter, Rick A Carlson, Francis Parchaso, Steven V. Fend, Natalie Stauffer-Olsen, Andrew J. Manning, Jennie M. Land
2016, Open-File Report 2016-1175
Executive SummaryMultiple sampling trips during calendar years 2013 through 2015 were coordinated to provide measurements of interdependent benthic processes that potentially affect contaminant transport in Upper Klamath Lake (UKL), Oregon. The measurements were motivated by recognition that such internal processes (for example, solute benthic flux, bioturbation and solute efflux by...
Characterizing changes in streamflow and sediment supply in the Sacramento River Basin, California, using hydrological simulation program—FORTRAN (HSPF)
Michelle A. Stern, Lorraine E. Flint, Justin Toby Minear, Alan L. Flint, Scott Wright
2016, Water (8) 432
A daily watershed model of the Sacramento River Basin of northern California was developed to simulate streamflow and suspended sediment transport to the San Francisco Bay-Delta. To compensate for sparse data, a unique combination of model inputs was developed, including meteorological variables, potential evapotranspiration, and parameters defining hydraulic geometry. A...
Feasibility study of earthquake early warning (EEW) in Hawaii
Weston A. Thelen, Alicia J. Hotovec-Ellis, Paul Bodin
2016, Open-File Report 2016-1172
The effects of earthquake shaking on the population and infrastructure across the State of Hawaii could be catastrophic, and the high seismic hazard in the region emphasizes the likelihood of such an event. Earthquake early warning (EEW) has the potential to give several seconds of warning before strong shaking starts,...
Geologic structure of the Yucaipa area inferred from gravity data, San Bernardino and Riverside Counties, California
Gregory O. Mendez, Victoria E. Langenheim, Andrew Morita, Wesley R. Danskin
2016, Open-File Report 2016-1127
In the spring of 2009, the U.S. Geological Survey, in cooperation with the San Bernardino Valley Municipal Water District, began working on a gravity survey in the Yucaipa area to explore the three-dimensional shape of the sedimentary fill (alluvial deposits) and the surface of the underlying crystalline basement rocks....
MT3D-USGS version 1: A U.S. Geological Survey release of MT3DMS updated with new and expanded transport capabilities for use with MODFLOW
Vivek Bedekar, Eric D. Morway, Christian D. Langevin, Matthew J. Tonkin
2016, Techniques and Methods 6-A53
MT3D-USGS, a U.S. Geological Survey updated release of the groundwater solute transport code MT3DMS, includes new transport modeling capabilities to accommodate flow terms calculated by MODFLOW packages that were previously unsupported by MT3DMS and to provide greater flexibility in the simulation of solute transport and reactive solute transport. Unsaturated-zone...
Using inferential sensors for quality control of Everglades Depth Estimation Network water-level data
Matthew D. Petkewich, Ruby C. Daamen, Edwin A. Roehl, Paul Conrads
2016, Scientific Investigations Report 2016-5094
The Everglades Depth Estimation Network (EDEN), with over 240 real-time gaging stations, provides hydrologic data for freshwater and tidal areas of the Everglades. These data are used to generate daily water-level and water-depth maps of the Everglades that are used to assess biotic responses to hydrologic change resulting from the...
User’s manual for the Automated Data Assurance and Management application developed for quality control of Everglades Depth Estimation Network water-level data
Matthew D. Petkewich, Ruby C. Daamen, Edwin A. Roehl, Paul Conrads
2016, Open-File Report 2016-1116
The generation of Everglades Depth Estimation Network (EDEN) daily water-level and water-depth maps is dependent on high quality real-time data from over 240 water-level stations. To increase the accuracy of the daily water-surface maps, the Automated Data Assurance and Management (ADAM) tool was created by the U.S. Geological Survey as...
Altitudes and thicknesses of hydrogeologic units of the Ozark Plateaus aquifer system in Arkansas, Kansas, Missouri, and Oklahoma
Drew A. Westerman, Jonathan A. Gillip, Joseph M. Richards, Phillip D. Hays, Brian R. Clark
2016, Scientific Investigations Report 2016-5130
A hydrogeologic framework was constructed to represent the altitudes and thicknesses of hydrogeologic units within the Ozark Plateaus aquifer system as part of a regional groundwater-flow model supported by the U.S. Geological Survey Water Availability and Use Science Program. The Ozark Plateaus aquifer system study area is nearly 70,000 square...
Cyanobacterial harmful algal blooms and U.S. Geological Survey science capabilities
Jennifer L. Graham, Neil M. Dubrovsky, Sandra M. Eberts
2016, Open-File Report 2016-1174
Cyanobacterial harmful algal blooms (CyanoHABs) are increasingly a global concern because CyanoHABs pose a threat to human and aquatic ecosystem health and cause economic damages. Despite advances in scientific understanding of cyanobacteria and associated compounds, many unanswered questions remain about occurrence, environmental triggers for toxicity, and the ability to predict...
2011 Souris River flood—Will it happen again?
Rochelle A. Nustad, Kelsey A. Kolars, Aldo V. Vecchia, Karen R. Ryberg
2016, Fact Sheet 2016-3073
The Souris River Basin is a 61,000 square kilometer basin in the provinces of Saskatchewan and Manitoba and the state of North Dakota. Record setting rains in May and June of 2011 led to record flooding with peak annual streamflow values (762 cubic meters per second [m3/s]) more than twice...
