Damage and recovery assessment of the Philippines' mangroves following Super Typhoon Haiyan
Jordan Long, Chandra Giri, Jurgene H. Primavera, Mandar Trivedi
2016, Marine Pollution Bulletin (109) 734-743
We quantified mangrove disturbance resulting from Super Typhoon Haiyan using a remote sensing approach. Mangrove areas were mapped prior to Haiyan using 30 m Landsat imagery and a supervised decision-tree classification. A time sequence of 250 m eMODIS data was used to monitor mangrove condition prior to, and following, Haiyan. Based on...
Electrofishing effort requirements for estimating species richness in the Kootenai River, Idaho
Carson J. Watkins, Michael C. Quist, Bradley B. Shepard, Susan C. Ireland
2016, Northwest Science (90) 315-327
This study was conducted on the Kootenai River, Idaho to provide insight on sampling requirements to optimize future monitoring effort associated with the response of fish assemblages to habitat rehabilitation. Our objective was to define the electrofishing effort (m) needed to have a 95% probability of sampling 50, 75, and...
Observations and modeling of fjord sedimentation during the 30 year retreat of Columbia Glacier, AK
Katherine B Love, Bernard Hallet, Thomas L. Pratt, Shad O’Neel
2016, Journal of Glaciology (62) 778-793
To explore links between glacier dynamics, sediment yields and the accumulation of glacial sediments in a temperate setting, we use extensive glaciological observations for Columbia Glacier, Alaska, and new oceanographic data from the fjord exposed during its retreat. High-resolution seismic data indicate that 3.2 × 108 m3 of...
Origin of the pulse-like signature of shallow long-period volcano seismicity
Bernard A. Chouet, Phillip B. Dawson
2016, Journal of Geophysical Research B: Solid Earth (121) 5931-5941
Short-duration, pulse-like long-period (LP) events are a characteristic type of seismicity accompanying eruptive activity at Mount Etna in Italy in 2004 and 2008 and at Turrialba Volcano in Costa Rica and Ubinas Volcano in Peru in 2009. We use the discrete wave number method to compute the free surface response...
Coseismic slip and early afterslip of the 2015 Illapel, Chile, earthquake: Implications for frictional heterogeneity and coastal uplift
William D. Barnhart, Jessica R. Murray, Richard W. Briggs, Francisco Gomez, Charles P. J. Miles, Jerry L. Svarc, Sebástian Riquelme, Bryan J. Stressler
2016, Journal of Geophysical Research B: Solid Earth (121) 6172-6191
Great subduction earthquakes are thought to rupture portions of the megathrust, where interseismic coupling is high and velocity-weakening frictional behavior is dominant, releasing elastic deformation accrued over a seismic cycle. Conversely, postseismic afterslip is assumed to occur primarily in regions of velocity-strengthening frictional characteristics that may correlate with lower interseismic...
Effects of spray-dried Pseudomonas fluorescens, strain CL145A (Zequanox®) on reproduction and early development of the fathead minnow (Pimephales promelas).
Diane L. Waller, James A. Luoma
2016, Report
The biopesticide, Zequanox®, is registered for dreissenid mussel control in open water systems. Previous toxicity trials with nontarget organisms, including young-of-the year of several fish species and invertebrates, demonstrated selectivity of Zequanox for dreissenids. However, data are lacking on its safety to reproductive and early life stages of fish. The...
Land use in the Northern Great Plains region of the U.S. influences the survival and productivity of honey bee colonies
Matthew Smart, Jeff S. Pettis, Ned H. Jr. Euliss, Marla S. Spivak
2016, Agriculture, Ecosystems and Environment (230) 139-149
The Northern Great Plains region of the US annually hosts a large portion of commercially managed U.S. honey bee colonies each summer. Changing land use patterns over the last several decades have contributed to declines in the availability of bee forage across the region, and the future sustainability of the...
Landscape effects of wildfire on permafrost distribution in interior Alaska derived from remote sensing
Dana R. N. Brown, M. Torre Jorgenson, Knut Kielland, David L. Verbyla, Anupma Prakash, Joshua C. Koch
2016, Remote Sensing (8) 1-22
Climate change coupled with an intensifying wildfire regime is becoming an important driver of permafrost loss and ecosystem change in the northern boreal forest. There is a growing need to understand the effects of fire on the spatial distribution of permafrost and its associated ecological consequences. We focus on the...
Amplification of postwildfire peak flow by debris
Jason W. Kean, Luke McGuire, Francis K. Rengers, Joel B. Smith, Dennis M. Staley
2016, Geophysical Research Letters (43) 8545-8553
In burned steeplands, the peak depth and discharge of postwildfire runoff can substantially increase from the addition of debris. Yet methods to estimate the increase over water flow are lacking. We quantified the potential amplification of peak stage and discharge using video observations of postwildfire runoff, compiled data on postwildfire...
Carbon and energy fluxes in cropland ecosystems: a model-data comparison
E. Lokupitiya, A. Scott Denning, K. Schaefer, D. Ricciuto, R. Anderson, M. A. Arain, I. Baker, A. G. Barr, G. Chen, J.M. Chen, P. Ciais, D.R. Cook, M.C. Dietze, M. El Maayar, M. Fischer, R. Grant, D. Hollinger, C. Izaurralde, A. Jain, C.J. Kucharik, Z. Li, S. Liu, L. Li, R. Matamala, P. Peylin, D. Price, S. W. Running, A. Sahoo, M. Sprintsin, A.E. Suyker, H. Tian, Christina Tonitto, M.S. Torn, Hans Verbeeck, S.B. Verma, Y. Xue
2016, Biogeochemistry (128) 53-76
Croplands are highly productive ecosystems that contribute to land–atmosphere exchange of carbon, energy, and water during their short growing seasons. We evaluated and compared net ecosystem exchange (NEE), latent heat flux (LE), and sensible heat flux (H) simulated by a suite of ecosystem models at five agricultural eddy covariance flux...
Does resolution of flow field observation influence apparent habitat use and energy expenditure in juvenile coho salmon?
Desiree D. Tullos, Cara Walter, Jason B. Dunham
2016, Water Resources Research (52) 5938-5950
This study investigated how the resolution of observation influences interpretation of how fish, juvenile Coho Salmon (Oncorhynchus kisutch), exploit the hydraulic environment in streams. Our objectives were to evaluate how spatial resolution of the flow field observation influenced: (1) the velocities considered to be representative of habitat units; (2) patterns...
Spawning and hatching of endangered Gila Chub in captivity
Andrew A. Schultz, Scott A. Bonar
2016, North American Journal of Aquaculture (78) 279-283
Information on reproductive characteristics of the endangered Gila Chub Gila intermedia is largely limited and qualitative, and culture techniques and requirements are virtually unknown. Here we provide the first published data on spawning and selected reproductive and developmental characteristics of Gila Chub. Fish were brought to the laboratory in March...
Field scale test of multi-dimensional flow and morphodynamic simulations used for restoration design analysis
Richard R. McDonald, Jonathan M. Nelson, Ryan L. Fosness, Peter O. Nelson
George Constantinescu, Marcelo H. Garcia, Dan Hanes, editor(s)
2016, Conference Paper, RiverFlow 2016
Two- and three-dimensional morphodynamic simulations are becoming common in studies of channel form and process. The performance of these simulations are often validated against measurements from laboratory studies. Collecting channel change information in natural settings for model validation is difficult because it can be expensive and under most channel forming...
Transmission of influenza reflects seasonality of wild birds across the annual cycle
Nichola J. Hill, Brandt W. Meixell, Eric J. Ma, Mark S. Lindberg, Walter M. Boyce, Jonathan A. Runstadler
2016, Ecology Letters (19) 915-925
Influenza A Viruses (IAV) in nature must overcome shifting transmission barriers caused by the mobility of their primary host, migratory wild birds, that change throughout the annual cycle. Using a phylogenetic network of viral sequences from North American wild birds (2008–2011) we demonstrate a shift from intraspecific to interspecific transmission...
Measuring, interpreting, and responding to changes in coral reefs: A challenge for biologists, geologist, and managers
Caroline S. Rogers, Jeff Miller
Dennis K. Hubbard, Caroline S. Rogers, Jere H. Lipps, George D. Stanley Jr., editor(s)
2016, Book chapter, Coral reefs at the crossroads
What, exactly, is a coral reef? And how have the world’s reefs changed in the last several decades? What are the stressors undermining reef structure and function? Given the predicted effects of climate change, do reefs have a future? Is it possible to “manage” coral reefs for resilience?...
Considering transient population dynamics in the conservation of slow life-history species: An application to the sandhill crane
Brian D. Gerber, William L. Kendall
2016, Biological Conservation (200) 228-239
The importance of transient dynamics of structured populations is increasingly recognized in ecology, yet these implications are not largely considered in conservation practices. We investigate transient and long-term population dynamics to demonstrate the process and utility of incorporating transient dynamics into conservation research and to better understand the population management...
Development and assessment of indices to determine stream fish vulnerability to climate change and habitat alteration
Nicholas A. Sievert, Craig P. Paukert, Yin-Phan Tsang, Dana M. Infante
2016, Ecological Indicators (67) 403-416
Understanding the future impacts of climate and land use change are critical for long-term biodiversity conservation. We developed and compared two indices to assess the vulnerability of stream fish in Missouri, USA based on species environmental tolerances, rarity, range size, dispersal ability and on the average connectivity of the streams...
Synchrony of Piping Plover breeding populations in the U.S. Northern Great Plains
Erin A. Roche, Terry L. Shaffer, Colin M. Dovichin, Mark H. Sherfy, Michael J. Anteau, Mark T. Wiltermuth
2016, Condor (118) 558-570
Local populations that fluctuate synchronously are at a greater risk of extinction than those that do not. The closer the geographic proximity of populations, the more prone they are to synchronizing. Shorebird species select habitat broadly, and many breed across regions with diverse nesting habitat types. Under these conditions, nearby...
The influence of vegetation cover on debris-flow density during an extreme rainfall in the northern Colorado Front Range
Francis K. Rengers, Luke McGuire, Jeffrey A. Coe, Jason W. Kean, Rex L. Baum, Dennis M. Staley, Jonathan W. Godt
2016, Geology (44) 823-826
We explored regional influences on debris-flow initiation throughout the Colorado Front Range (Colorado, USA) by exploiting a unique data set of more than 1100 debris flows that initiated during a 5 day rainstorm in 2013. Using geospatial data, we examined the influence of rain, hillslope angle, hillslope aspect, and vegetation...
Novel cell-based assay for detection of thyroid receptor beta-interacting environmental contaminants
Diana A. Stavreva, Lyuba Varticovski, Ludmila Levkova, Anuja A. George, Luke Davis, Gianluca Pegoraro, Vicki S. Blazer, Luke R. Iwanowicz, Gordon L. Hager
2016, Toxicology (368-369) 69-79
Even though the presence of endocrine disrupting chemicals (EDCs) with thyroid hormone (TH)-like activities in the environment is a major health concern, the methods for their efficient detection and monitoring are still limited. Here we describe a novel cell assay, based on the translocation of a green fluorescent protein (GFP)—tagged...
Smokey comes of age: Unmanned aerial systems for fire management
Dirac Twidwell, Craig R. Allen, Carrick Detweiler, James Higgins, Christian Laney, Sebastian Elbaum
2016, Frontiers in Ecology and the Environment (14) 333-339
During the past century, fire management has focused on techniques both to protect human communities from catastrophic wildfire and to maintain fire-dependent ecological systems. However, despite a large and increasing allocation of resources and personnel to achieve these goals, fire management objectives at regional to global scales are not being...
Teleconnected ocean forcing of Western North American droughts and pluvials during the last millennium
Cody C. Routson, Connie A. Woodhouse, Jonathan T. Overpeck, Julio L. Betancourt, Nicholas P. McKay
2016, Quaternary Science Reviews (146) 238-250
Western North America (WNA) is rich in hydroclimate reconstructions, yet questions remain about the causes of decadal-to-multidecadal hydroclimate variability. Teleconnection patterns preserved in annually-resolved tree-ring reconstructed drought maps, and anomalies in a global network of proxy sea surface temperature (SST) reconstructions, were used to reassess the evidence linking ocean forcing...
Using the North American Breeding Bird Survey to assess broad-scale response of the continent's most imperiled avian community, grassland birds, to weather variability
Jessica Gorzo, Anna M. Pidgeon, Wayne E. Thogmartin, Andrew J. Allstadt, Volker C. Radeloff, Patricia J. Heglund, Stephen J. Vavrus
2016, The Condor (118) 502-512
Avian populations can respond dramatically to extreme weather such as droughts and heat waves, yet patterns of response to weather at broad scales remain largely unknown. Our goal was to evaluate annual variation in abundance of 14 grassland bird species breeding in the northern mixed-grass prairie in relation to annual...
Desert bighorn sheep lambing habitat: Parturition, nursery, and predation sites
Rebekah C. Karsch, James W. Cain III, Eric M. Rominger, Elise J. Goldstein
2016, Journal of Wildlife Management (80) 1069-1080
Fitness of female ungulates is determined by neonate survival and lifetime reproductive success. Therefore, adult female ungulates should adopt behaviors and habitat selection patterns that enhance survival of neonates during parturition and lactation. Parturition site location may play an important role in neonatal mortality of desert bighorn sheep (Ovis canadensis...
Comparisons between vs30 and spectral response for 30 sites in Newcastle, Australia from collocated seismic cone penetrometer, active- and passive-source vs data
Theodora Volti, David Burbidge, Clive Collins, Michael W. Asten, Jackson K. Odum, William J. Stephenson, Chris Pascal, Josef Holzschuh
2016, Bulletin of the Seismological Society of America (106) 1690-1709
Although the time‐averaged shear‐wave velocity down to 30 m depth (VS30) can be a proxy for estimating earthquake ground‐motion amplification, significant controversy exists about its limitations when used as a single parameter for the prediction of amplification. To examine this question in absence of relevant strong‐motion records, we use a range...
