Increased temperatures combined with lowered salinities differentially impact oyster size class growth and mortality
Megan K. LaPeyre, Molly Rybovich, Steven G. Hall, Jerome F. La Peyre
2016, Journal of Shellfish Research (35) 101-113
Changes in the timing and interaction of seasonal high temperatures and low salinities as predicted by climate change models could dramatically alter oyster population dynamics. Little is known explicitly about how low salinity and high temperature combinations affect spat (<25mm), seed (25–75mm), andmarket (>75mm) oyster growth and mortality. Using field...
Temporal, geographic, and host distribution of avian paramyxovirus 1 (Newcastle disease virus)
Kiril M. Dimitrov, Andrew M. Ramey, Xueting Qiu, Justin Bahl, Claudio L. Afonso
2016, Infection, Genetics and Evolution (39) 22-34
Newcastle disease is caused by virulent forms of avian paramyxovirus of serotype 1 (APMV-1) and has global economic importance. The disease reached panzootic proportions within two decades after first being identified in 1926 in the United Kingdom and Indonesia and still remains endemic in many countries across the world. Here...
Landscape composition creates a threshold influencing Lesser Prairie-Chicken population resilience to extreme drought
Beth E. Ross, David A. Haukos, Christian A. Hagen, James C. Pitman
2016, Global Ecology and Conservation (6) 179-188
Habitat loss and degradation compound the effects of climate change on wildlife, yet responses to climate and land cover change are often quantified independently. The interaction between climate and land cover change could be intensified in the Great Plains region where grasslands are being converted to row-crop agriculture concurrent with...
Municipal solid waste landfills harbor distinct microbiomes
Blake W. Stamps, Christopher N. Lyles, Joseph M. Suflita, Jason R. Masoner, Isabelle M. Cozzarelli, Dana W. Kolpin, Bradley S. Stevenson
2016, Frontiers in Microbiology (7) 1-11
Landfills are the final repository for most of the discarded material from human society and its “built environments.” Microorganisms subsequently degrade this discarded material in the landfill, releasing gases (largely CH4 and CO2) and a complex mixture of soluble chemical compounds in leachate. Characterization of “landfill microbiomes” and their comparison...
Airborne pathogens from dairy manure aerial irrigation and the human health risk
Mark A. Borchardt, Tucker R Burch
2016, Report, Considerations for the use of manure irrigation practices
Dairy manure, like the fecal excrement from any domesticated or wild animal, can contain pathogens capable of infecting humans and causing illness or even death. Pathogens in dairy manure can be broadly divided into categories of taxonomy or infectiousness. Dividing by taxonomy there are three pathogen groups in dairy manure:...
Seeded amplification of chronic wasting disease prions in nasal brushings and recto-anal mucosal associated lymphoid tissues from elk by real time quaking-induced conversion
Nicholas J. Haley, Chris Siepker, Laura L. Hoon-Hanks, Gordon Mitchell, W. David Walter, Matteo Manca, Ryan J. Monello, Jenny G. Powers, Margaret A. Wild, Edward A. Hoover, Byron Caughey, Jurgen a. Richt
B.W. Fenwick, editor(s)
2016, Journal of Clinical Microbiology (54) 1117-1126
Chronic wasting disease (CWD), a transmissible spongiform encephalopathy of cervids, was first documented nearly 50 years ago in Colorado and Wyoming and has since been detected across North America and the Republic of Korea. The expansion of this disease makes the development of sensitive diagnostic assays and antemortem sampling techniques...
Slow climate velocities of mountain streams portend their role as refugia for cold-water biodiversity
Daniel J. Isaak, Michael K. Young, Charles H. Luce, Steven W. Hostetler, Seth J. Wenger, Erin E. Peterson, Jay Ver Hoef, Matthew C. Groce, Dona L. Horan, David E. Nagel
2016, Proceedings of the National Academy of Sciences of the United States of America (113) 4374-4379
The imminent demise of montane species is a recurrent theme in the climate change literature, particularly for aquatic species that are constrained to networks and elevational rather than latitudinal retreat as temperatures increase. Predictions of widespread species losses, however, have yet to be fulfilled despite decades of climate change, suggesting...
Off-road vehicles affect nesting behaviour and reproductive success of American Oystercatchers Haematopus palliatus
Tracy E. Borneman, Eli T. Rose, Theodore R. Simons
2016, International Journal of Avian Science (158) 261-278
As human populations and associated development increase, interactions between humans and wildlife are occurring with greater frequency. The effects of these interactions, particularly on species whose populations are declining, are of great interest to ecologists, conservationists, land managers and natural resource policy-makers. The American Oystercatcher Haematopus palliatus, a species of...
2015 National Park visitor spending effects: Economic contributions to local communities, states, and the nation
Catherine M. Cullinane Thomas, Lynne Koontz
2016, Natural Resource Report NPS/NRSS/EQD/NRR—2016/1200
The National Park Service (NPS) manages the Nation’s most iconic destinations that attract millions of visitors from across the Nation and around the world. Trip-related spending by NPS visitors generates and supports a considerable amount of economic activity within park gateway communities. This economic effects analysis measures how NPS visitor...
Basin scale controls on CO2 and CH4 emissions from the Upper Mississippi River
John T. Crawford, Luke C. Loken, Emily H. Stanley, Edward G. Stets, Mark M. Dornblaser, Robert G. Striegl
2016, Geophysical Research Letters (43) 1973-1979
The Upper Mississippi River, engineered for river navigation in the 1930s, includes a series of low-head dams and navigation pools receiving elevated sediment and nutrient loads from the mostly agricultural basin. Using high-resolution, spatially resolved water quality sensor measurements along 1385 river kilometers, we show that primary productivity and organic...
RMT focal plane sensitivity to seismic network geometry and faulting style
Kendra L. Johnson, Gavin P. Hayes, Robert B. Herrmann, Harley M. Benz, Daniel E. McNamara, Eric A. Bergman
2016, Geophysical Journal International (206) 525-556
Modern tectonic studies often use regional moment tensors (RMTs) to interpret the seismotectonic framework of an earthquake or earthquake sequence; however, despite extensive use, little existing work addresses RMT parameter uncertainty. Here, we quantify how network geometry and faulting style affect RMT sensitivity. We examine how data-model fits change with...
Effect of phytoremediation on concentrations of benzene, toluene, naphthalene, and dissolved oxygen in groundwater at a former manufactured gas plant site, Charleston, South Carolina, USA, 1998–2014
James Landmeyer, Thomas N. Effinger
2016, Environmental Earth Sciences (75)
Concentrations of benzene, toluene, naphthalene, and dissolved oxygen in groundwater at a former manufactured gas plant site near Charleston, South Carolina, USA, have been monitored since the installation of a phytoremediation system of hybrid poplar trees in 1998. Between 2000 and 2014, the concentrations of benzene, toluene, and naphthalene (BT&N)...
Construction, calibration, and validation of the RBM10 water temperature model for the Trinity River, northern California
Edward C. Jones, Russell W. Perry, John C. Risley, Nicholas A. Som, Nicholas J. Hetrick
2016, Open-File Report 2016-1056
We constructed a one-dimensional daily averaged water-temperature model to simulate Trinity River temperatures for 1980–2013. The purpose of this model is to assess effects of water-management actions on water temperature and to provide water temperature inputs for a salmon population dynamics model. Simulated meteorological data, observed streamflow data, and...
Surveillance for highly pathogenic avian influenza virus in wild birds during outbreaks in domestic poultry, Minnesota, 2015
Christopher S. Jennelle, Michelle Carstensen, Erik C. Hildebrand, Louis Cornicelli, Paul C. Wolf, Daniel A. Grear, S. Ip, Kaci K. VanDalen, Larissa A. Minicucci
2016, Emerging Infectious Diseases (22) 1278-1282
In 2015, a major outbreak of highly pathogenic avian influenza virus (HPAIV) infection devastated poultry facilities in Minnesota, USA. To clarify the role of wild birds, we tested 3,139 waterfowl fecal samples and 104 sick and dead birds during March 9–June 4, 2015. HPAIV was isolated from a Cooper’s hawk...
Temporal and spatial patterns of wetland extent influence variability of surface water connectivity in the Prairie Pothole Region, United States
Melanie K. Vanderhoof, Laurie C. Alexander, Jason Todd
2016, Landscape Ecology (31) 805-824
Context. Quantifying variability in landscape-scale surface water connectivity can help improve our understanding of the multiple effects of wetlands on downstream waterways. Objectives. We examined how wetland merging and the coalescence of wetlands with streams varied both spatially (among ecoregions) and interannually (from drought to deluge) across parts of the...
Assessment of undiscovered oil and gas resources of the Taoudeni Basin Province, Mali and Mauritania, 2015
Michael E. Brownfield, Christopher J. Schenk, Timothy R. Klett, Marilyn E. Tennyson, Janet K. Pitman, Stephanie B. Gaswirth, Phuong A. Le, Heidi M. Leathers-Miller, Tracey J. Mercier, Kristen R. Marra, Sarah J. Hawkins
2016, Fact Sheet 2016-3003
Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean resources of 160 million barrels of conventional oil, 1,880 billion cubic feet of conventional gas, 602 million barrels of shale oil, and 6,395 billion cubic feet of shale gas in the Taoudeni Basin Province in Mali...
Energetic costs of mange in wolves estimated from infrared thermography
Paul C. Cross, Emily S. Almberg, Catherine G Haase, Peter J. Hudson, Shane K Maloney, Matthew C Metz, Adam J Munn, Paul Nugent, Olivier Putzeys, Daniel R. Stahler, Anya C Stewart, Doug W. Smith
2016, Ecology (97) 1938-1948
Parasites, by definition, extract energy from their hosts and thus affect trophic and food web dynamics even when the parasite may have limited effects on host population size. We studied the energetic costs of mange (Sarcoptes scabiei) in wolves (Canis lupus) using thermal cameras to estimate heat losses associated with...
DNA and dispersal models highlight constrained connectivity in a migratory marine megavertebrate
Eugenia Naro-Maciel, Kristen M. Hart, Rossana Cruciata, Nathan Freeman Putman
2016, Ecography (40) 586-597
Population structure and spatial distribution are fundamentally important fields within ecology, evolution, and conservation biology. To investigate pan-Atlantic connectivity of globally endangered green turtles (Chelonia mydas) from two National Parks in Florida, USA, we applied a multidisciplinary approach comparing genetic analysis and ocean circulation modeling. The Everglades (EP) is a...
Conditional vulnerability of plant diversity to atmospheric nitrogen deposition across the United States
Samuel M. Simkin, Edith B. Allen, William D. Bowman, Christopher L. Clark, Jayne Belnap, Matthew L. Brooks, Brian S. Cade, Scott L. Collins, Linda H. Geiser, Frank S. Gilliam, Sarah E. Jovan, Linda H. Pardo, Bethany K. Schulz, Carly J. Stevens, Katharine N. Suding, Heather L. Throop, Donald M. Waller
2016, PNAS (113) 4086-4091
Atmospheric nitrogen (N) deposition has been shown to decrease plant species richness along regional deposition gradients in Europe and in experimental manipulations. However, the general response of species richness to N deposition across different vegetation types, soil conditions, and climates remains largely unknown even though responses may be contingent on...
Habitat selection by green turtles in a spatially heterogeneous benthic landscape in Dry Tortugas National Park, Florida
Ikuko Fujisaki, Kristen M. Hart, Autumn R. Sartain-Iverson
2016, Aquatic Biology (24) 185-199
We examined habitat selection by green turtles Chelonia mydas at Dry Tortugas National Park, Florida, USA. We tracked 15 turtles (6 females and 9 males) using platform transmitter terminals (PTTs); 13 of these turtles were equipped with additional acoustic transmitters. Location data by PTTs comprised periods of 40 to 226...
Normal streamflows and water levels continue—Summary of hydrologic conditions in Georgia, 2014
Andrew E. Knaak, Paul D. Ankcorn, Michael F. Peck
2016, Fact Sheet 2016-3016
The U.S. Geological Survey (USGS) South Atlantic Water Science Center (SAWSC) Georgia office, in cooperation with local, State, and other Federal agencies, maintains a long-term hydrologic monitoring network of more than 350 real-time, continuous-record, streamflow-gaging stations (streamgages). The network includes 14 real-time lake-level monitoring stations, 72 real-time surface-water-quality monitors, and...
The Galapagos archipelago: A natural laboratory to examine sharp hydroclimatic, geologic and anthropogenic gradients
Madelyn Percy, Sarah Schmitt, Diego Riveros-Iregui, Benjamin B. Mirus
2016, WIREs Water (3) 587-600
Poor understanding of the water cycle in tropical ecosystems has the potential to exacerbate water shortages and water crises in the region. We suggest that the Galápagos Islands provide an excellent proxy to regions across the tropics as a result of sharp hydroclimatic, anthropogenic, and pedohydrologic gradients across the archipelago....
Young of the year bluefish (Pomatomus saltatrix) as a bioindicator of estuarine health: Establishing a new baseline for persistent organic pollutants after Hurricane Sandy for selected estuaries in New Jersey and New York
Kelly L. Smalling, Ashok D. Deshpande, Vicki S. Blazer, Bruce W Dockum, DeMond Timmons, Beth L. Sharack, Ronald J. Baker, Jennifer Samson, Timothy J. Reilly
2016, Marine Pollution Bulletin (107) 422-431
Atlantic coastal bays of the US are essential habitat for young of year bluefish (Pomatomus saltatrix). Their residence in these estuaries during critical life stages, high lipid content, and piscivory make bluefish an ideal bioindicator species for evaluating estuarine health. Individual whole fish from four estuaries impacted by Hurricane Sandy...
Hydrologic Conditions in Kansas, water year 2015
Madison R. May
2016, Fact Sheet 2016-3015
The U.S. Geological Survey (USGS), in cooperation with Federal, State, and local agencies, maintains a long-term network of hydrologic monitoring sites in Kansas. In 2015, the network included about 200 real-time streamgages (hereafter referred to as “gages”), 12 real-time reservoir-level monitoring stations, and 30 groundwater-level monitoring wells. These data and...
Relationships between diatoms and tidal environments in Oregon and Washington, USA
Yuki Sawai, Benjamin P. Horton, Andrew C. Kemp, Andrea D. Hawkes, Tamostsu Nagumo, Alan R. Nelson
2016, Diatom Research (31) 17-38
A new regional dataset comprising 425 intertidal diatom taxa from 175 samples from 11 ecologically diverse Oregon and Washington estuaries illustrates the importance of compiling a large modern dataset from a range of sites. Cluster analyses and detrended correspondence analysis of the diatom assemblages identify distinct vertical zones within supratidal,...