Usefulness of hemocytometer as a counting chamber in a computer assisted sperm analyzer (CASA)
A. Eljarah, J. Chandler, J.A. Jenkins, J. Chenevert, A. Alcanal
2013, Animal Reproduction (10) 708-711
Several methods are used to determine sperm cell concentration, such as the haemocytometer, spectrophotometer, electronic cell counter and computer-assisted semen analysers (CASA). The utility of CASA systems has been limited due to the lack of characterization of individual systems and the absence of standardization among laboratories. The aims of this...
The innate immune response may be important for surviving plague in wild Gunnison's prairie dogs
Joseph D. Busch, Roger Van Andel, Nathan E. Stone, Kacy R. Cobble, Roxanne Nottingham, Judy Lee, Michael VerSteeg, Jeff Corcoran, Jennifer Cordova, William E. Van Pelt, Megan M. Shuey, Jeffrey T. Foster, James M. Schupp, Stephen Beckstrom-Sternberg, James Beckstrom-Sternberg, Paul Keim, Susan Smith, Julia Rodriguez-Ramos, Judy L. Williamson, Tonie E. Rocke, David M. Wagner
2013, Journal of Wildlife Diseases (49) 920-931
Prairie dogs (Cynomys spp.) are highly susceptible to Yersinia pestis, with ≥99% mortality reported from multiple studies of plague epizootics. A colony of Gunnison's prairie dogs (Cynomys gunnisoni) in the Aubrey Valley (AV) of northern Arizona appears to have survived several regional epizootics of plague, whereas nearby colonies have been...
Multivariate analysis of ATR-FTIR spectra for assessment of oil shale organic geochemical properties
Kathryn E. Washburn, Justin E. Birdwell
2013, Organic Geochemistry (63) 1-7
In this study, attenuated total reflectance (ATR) Fourier transform infrared spectroscopy (FTIR) was coupled with partial least squares regression (PLSR) analysis to relate spectral data to parameters from total organic carbon (TOC) analysis and programmed pyrolysis to assess the feasibility of developing predictive models to estimate important organic geochemical parameters....
Retrospective analysis of bottlenose dolphin foraging: a legacy of anthropogenic ecosystem disturbance
Sam Rossman, Nélio B. Barros, Peggy H. Ostrom, Craig A. Stricker, Aleta A. Hohn, Hasand Gandhi, Randall S. Wells
2013, Marine Mammal Science (29) 705-718
We used stable isotope analysis to investigate the foraging ecology of coastal bottlenose dolphins (Tursiops truncatus) in relation to a series of anthropogenic disturbances. We first demonstrated that stable isotopes are a faithful indicator of habitat use by comparing muscle isotope values to behavioral foraging data from the same individuals....
A multilocus evaluation of ermine (Mustela erminea) across the Holarctic, testing hypotheses of Pleistocene diversification in response to climate change
Natalie G. Dawson, Andrew G. Hope, Sandra L. Talbot, Joseph A. Cook
2013, Journal of Biogeography (41) 464-475
Aim: We examined data for ermine (Mustela erminea) to test two sets of diversification hypotheses concerning the number and location of late Pleistocene refugia, the timing and mode of diversification, and the evolutionary influence of insularization. Location: Temperate and sub-Arctic Northern Hemisphere. Methods: We used up to two mitochondrial and four nuclear...
Social-ecological predictors of global invasions and extinctions
Aaron Lotz, Craig R. Allen
2013, Ecology and Society (18)
Most assessments of resilience have been focused on local conditions. Studies focused on the relationship between humanity and environmental degradation are rare, and are rarely comprehensive. We investigated multiple social-ecological factors for 100 countries around the globe in relation to the percentage of invasions and extinctions within each country. These...
Evaluation of potential gas clogging associated with managed aquifer recharge from a spreading basin, southwestern Utah, U.S.A.
Victor M. Heilweil, Thomas Marston
2013, Book chapter, Clogging issues associated with managed aquifer recharge methods
Sand Hollow Reservoir in southwestern Utah, USA, is operated for both surface-water storage and managed aquifer recharge via infiltration from surface basin spreading to the underlying Navajo Sandstone. The total volume of estimated recharge from 2002 through 2011 was 131 Mm3., resulting in groundwater levels rising as much as 40...
Prescribed-fire effects on an aquatic community of a southwest montane grassland system
Colleen A. Caldwell, Gerald Z. Jacobi, Michael C. Anderson, Robert R. Parmenter, Jeanine McGann, William R. Gould, Robert DuBey, M. Donna Jacobi
2013, North American Journal of Fisheries Management (33) 1049-1062
The use of prescription fire has long been recognized as a reliable management tool to suppress vegetative succession processes and to reduce fuel loading to prevent catastrophic wildfires, but very little attention has been paid to the effects on aquatic systems. A late-fall prescribed burn was implemented to characterize effects...
Development of a reproducible method for determining quantity of water and its configuration in a marsh landscape
Glenn M. Suir, D. Elaine Evers, Gregory D. Steyer, Charles E. Sasser
2013, Journal of Coastal Research 110-117
Coastal Louisiana is a dynamic and ever-changing landscape. From 1956 to 2010, over 3,734 km2 of Louisiana's coastal wetlands have been lost due to a combination of natural and human-induced activities. The resulting landscape constitutes a mosaic of conditions from highly deteriorated to relatively stable with intact landmasses. Understanding how...
Comparing two fish sampling standards over time: largely congruent results but with caveats
Daniel L. Yule, Lori M. Evrard, Sebastien Cachera, Michel Colon, Jean Guillard
2013, Freshwater Biology (58) 2074-2088
1. We sampled Lake Bourget (surface area = 44 km2) using CEN standard gillnet and provisional standard acoustic survey methods over 3 years (2005, 2010 and 2011) as the fish community responded to re-oligotrophication. A total of 16 species were caught in benthic gillnets and three species in pelagic...
Experimental reintroduction reveals novel life-history variation in Laysan Ducks (Anas laysanensis)
Jeffrey R. Walters, Michelle H. Reynolds
2013, The Auk (130) 573-579
Subfossil remains indicate that the Laysan Duck (Anas laysanensis) formerly occurred throughout the Hawaiian archipelago, but for more than 150 years it has been confined to a single, small atoll in the northwestern chain, Laysan Island. In 2004–2005, 42 ducks were reintroduced from Laysan to Midway Atoll, where they exhibited...
The biogeographic histories of Pinus edulis and Pinus monophylla over the last 50,000 years
Kenneth L. Cole, Jessica F. Fisher, Kirsten E. Ironside, Jim I. Mead, Peter Koehler
2013, Quaternary International (310) 96-110
Well-preserved pine needles found in fossil packrat middens document the biogeographic responses of pinyon pines to changing climates over the last 50,000 years. During the full glacial Wisconsinan (MIS2), Pinus monophylla (single-needle pinyon), Pinus edulis (Colorado pinyon), and P. edulis var. fallax (Arizona singleleaf pinyon) all grew along the southern portions of their current ranges. P. monophylla extended from the southern...
Tsunami flooding
Eric Geist, Henry Jones, Mark McBride, Randy Fedors
2013, Conference Paper, Proceedings of the Workshop on Probabilistic Flood Hazard Assessment (PFHA): Held at the U.S. Nuclear Regulatory Commission Headquarters, Rockville, MD, January 29_31, 2013 (NUREG/CP-0302)
Panel 5 focused on tsunami flooding with an emphasis on Probabilistic Tsunami Hazard Analysis (PTHA) as derived from its counterpart, Probabilistic Seismic Hazard Analysis (PSHA) that determines seismic ground-motion hazards. The Panel reviewed current practices in PTHA and determined the viability of extending the analysis to extreme design probabilities (i.e.,...
Creel survey sampling designs for estimating effort in short-duration Chinook salmon fisheries
Joshua L. McCormick, Michael C. Quist, Daniel J. Schill
2013, North American Journal of Fisheries Management (33) 977-993
Chinook Salmon Oncorhynchus tshawytscha sport fisheries in the Columbia River basin are commonly monitored using roving creel survey designs and require precise, unbiased catch estimates. The objective of this study was to examine the relative bias and precision of total catch estimates using various sampling designs to estimate angling effort...
An international network of magnetic observatories
Jeffrey J. Love, A. Chulliat
2013, Eos, Transactions, American Geophysical Union (94) 373-374
Since its formation in the late 1980s, the International Real-Time Magnetic Observatory Network (INTERMAGNET), a voluntary consortium of geophysical institutes from around the world, has promoted the operation of magnetic observatories according to modern standards [eg. Rasson, 2007]. INTERMAGNET institutes have cooperatively developed infrastructure for data exchange and management ads...
Spatial variability of "Did You Feel It?" intensity data: insights into sampling biases in historical earthquake intensity distributions
Susan E. Hough
2013, Bulletin of the Seismological Society of America (103) 2767-2781
Recent parallel development of improved quantitative methods to analyze intensity distributions for historical earthquakes and of web‐based systems for collecting intensity data for modern earthquakes provides an opportunity to reconsider not only important individual historical earthquakes but also the overall characterization of intensity distributions for historical events. The focus of...
Global change and water availability and quality: Challenges ahead
Matthew C. Larsen
Satinder Ahuja, editor(s)
2013, Book chapter, Comprehensive water quality and purification
The US is in the midst of a continental scale, multiyear water resources experiment. What are we doing? We are expanding population at two to three times the national growth rate, particularly where water stress is already great. We are expanding irrigated agriculture from the west to the east, where...
Temporal dynamics of biogeochemical processes at the Norman Landfill site
Bhavna Arora, Binayak P. Mohanty, Jennifer T. McGuire, Isabelle M. Cozzarelli
2013, Water Resources Research (49) 6909-6926
The temporal variability observed in redox sensitive species in groundwater can be attributed to coupled hydrological, geochemical, and microbial processes. These controlling processes are typically nonstationary, and distributed across various time scales. Therefore, the purpose of this study is to investigate biogeochemical data sets from a municipal landfill site to...
Quaternary extensional growth folding beneath Reno, Nevada, imaged by urban seismic profiling
William J. Stephenson, Roxy N. Frary, John Louie, Jackson K. Odum
2013, Bulletin of the Seismological Society of America (103) 2921-2927
We characterize shallow subsurface faulting and basin structure along a transect through heavily urbanized Reno, Nevada, with high‐resolution seismic reflection imaging. The 6.8 km of P‐wave data image the subsurface to approximately 800 m depth and delineate two subbasins and basin uplift that are consistent with structure previously inferred from...
Effect of correlated observation error on parameters, predictions, and uncertainty
Claire R. Tiedeman, Christopher T. Green
2013, Water Resources Research (49) 6339-6355
Correlations among observation errors are typically omitted when calculating observation weights for model calibration by inverse methods. We explore the effects of omitting these correlations on estimates of parameters, predictions, and uncertainties. First, we develop a new analytical expression for the difference in parameter variance estimated with and without error...
Moderate-magnitude earthquakes induced by magma reservoir inflation at Kīlauea Volcano, Hawai‘i
Christelle Wauthier, Diana C. Roman, Michael P. Poland
2013, Geophysical Research Letters (20) 5366-5370
Although volcano-tectonic (VT) earthquakes often occur in response to magma intrusion, it is rare for them to have magnitudes larger than ~M4. On 24 May 2007, two shallow M4+ earthquakes occurred beneath the upper part of the east rift zone of Kīlauea Volcano, Hawai‘i. An integrated analysis of geodetic, seismic,...
Monitoring of livestock grazing effects on Bureau of Land Management land
Kari E. Veblen, David A. Pyke, Cameron L. Aldridge, Michael L. Casazza, Timothy J. Assal, Melissa A. Farinha
2013, Society for Range Management (67) 68-77
Public land management agencies, such as the Bureau of Land Management (BLM), are charged with managing rangelands throughout the western United States for multiple uses, such as livestock grazing and conservation of sensitive species and their habitats. Monitoring of condition and trends of these rangelands, particularly with respect to effects...
Cutthroat trout virus as a surrogate in vitro infection model for testing inhibitors of hepatitis E virus replication
Yannick Debing, James Winton, Johan Neyts, Kai Dallmeier
2013, Antiviral Research (100) 98-101
Hepatitis E virus (HEV) is one of the most important causes of acute hepatitis worldwide. Although most infections are self-limiting, mortality is particularly high in pregnant women. Chronic infections can occur in transplant and other immune-compromised patients. Successful treatment of chronic hepatitis E has been reported with ribavirin and pegylated...
Influence of dissolved organic matter character on mercury incorporation by planktonic organisms: an experimental study using oligotrophic water from Patagonian lakes
Maria C. Dieguez, Claudia P. Queimalinos, Sergio Ribeiro Guevara, Mark C. Marvin-DiPasquale, Carolina Soto Cardenas, Maria A. Arribere
2013, Journal of Environmental Sciences (25) 1980-1991
Ligands present in dissolved organic matter (DOM) form complexes with inorganic divalent mercury (Hg2+) affecting its bioavailability in pelagic food webs. This investigation addresses the influence of a natural gradient of DOM present in Patagonian lakes on the bioaccumulation of Hg2+ (the prevailing mercury species in the water column of...
Analysis of a GRACE global mascon solution for Gulf of Alaska glaciers
Anthony Arendt, Scott Luthcke, Alex Gardner, Shad O’Neel, David Hill, Geir Moholdt, Waleed Abdalati
2013, Journal of Glaciology (59) 913-924
We present a high-resolution Gravity Recovery and Climate Experiment (GRACE) mascon solution for Gulf of Alaska (GOA) glaciers and compare this with in situ glaciological, climate and other remote-sensing observations. Our GRACE solution yields a GOA glacier mass balance of –65 ± 11 Gt a–1 for the period December 2003...