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Uranium quantification in semen by inductively coupled plasma mass spectrometry
Todor I. Todorov, John W. Ejnik, Gustavo S. Guandalini, Hanna Xu, Dennis Hoover, Larry W. Anderson, Katherine Squibb, Melissa A. McDiarmid, Jose A. Centeno
2013, Journal of Trace Elements in Medicine and Biology (27) 2-6
In this study we report uranium analysis for human semen samples. Uranium quantification was performed by inductively coupled plasma mass spectrometry. No additives, such as chymotrypsin or bovine serum albumin, were used for semen liquefaction, as they showed significant uranium content. For method validation we spiked 2 g aliquots of pooled...
The role of virulence for in vivo superinfection fitness of a vertebrate RNA virus
Alison M. Kell, Andrew R. Wargo, Gael Kurath
2013, Journal of Virology (87) 8145-8157
We have developed a novel, in vivo superinfection fitness assay to examine superinfection dynamics and the role of virulence in superinfection fitness. This assay involves controlled, sequential infections of a natural, vertebrate host, Oncorhynchus mykiss (rainbow trout), with variants of a co-evolved viral pathogen, infectious hematopoietic necrosis virus (IHNV). Intervals...
Interacting coastal based ecosystem services: recreation and water quality in Puget Sound, WA
Jason Kreitler, Michael Papenfus, Kristin Byrd, William Labiosa
2013, PLoS ONE (8)
Coastal recreation and water quality are major contributors to human well-being in coastal regions. They can also interact, creating opportunities for ecosystem based management, ecological restoration, and water quality improvement that can positively affect people and the environment. Yet the effect of environmental quality on human behavior is often poorly...
Tracking sedimentation from the historic A.D. 2011 Mississippi River flood in the deltaic wetlands of Louisiana, USA
Nicole S. Khan, Benjamin P. Horton, Karen L. McKee, Douglas Jerolmack, Federico Falcini, Mihaela D. Enache, Christopher H. Vane
2013, Geology (41) 391-394
Management and restoration of the Mississippi River deltaic plain (southern United States) and associated wetlands require a quantitative understanding of sediment delivery during large flood events, past and present. Here, we investigate the sedimentary fingerprint of the 2011 Mississippi River flood across the Louisiana coast (Atchafalaya Delta, Terrebonne, Barataria, and...
Linking anti-predator behaviour to prey demography reveals limited risk effects of an actively hunting large carnivore
Arthur D. Middleton, Matthew J. Kauffman, Douglas E. McWhirter, Michael D. Jimenez, Rachel C. Cook, John G. Cook, Shannon E. Albeke, Hall Sawyer, P.J. White
2013, Ecology Letters (16) 1023-1030
Ecological theory predicts that the diffuse risk cues generated by wide-ranging, active predators should induce prey behavioural responses but not major, population- or community-level consequences. We evaluated the non-consumptive effects (NCEs) of an active predator, the grey wolf (Canis lupus), by simultaneously tracking wolves and the behaviour, body fat, and...
Direct estimation of diffuse gaseous emissions from coal fires: current methods and future directions
Mark A. Engle, Ricardo A. Olea, Jennifer M. K. O’Keefe, James C. Hower, Nicholas J. Geboy
2013, International Journal of Coal Geology (112) 164-172
Coal fires occur in nature spontaneously, contribute to increases in greenhouse gases, and emit atmospheric toxicants. Increasing interest in quantifying coal fire emissions has resulted in the adaptation and development of specialized approaches and adoption of numerical modeling techniques. Overview of these methods for direct estimation of diffuse gas emissions...
Disproportionation and thermochemical sulfate reduction reactions in S-H20-Ch4 and S-D2O-CH4 systems from 200 to 340 °C at elevated pressures
Shunda Yuan, I-Ming Chou, Robert A. Burruss
2013, Geochimica et Cosmochimica Acta (118) 263-275
Elemental sulfur, as a transient intermediate compound, by-product, or catalyst, plays significant roles in thermochemical sulfate reduction (TSR) reactions. However, the mechanisms of the reactions in S-H2O-hydrocarbons systems are not clear. To improve our understanding of reaction mechanisms, we conducted a series of experiments between 200 and 340 °C for...
Circulation exchange patterns in Sinclair Inlet, Washington
Marlene A. Noble, Kurt J. Rosenberger, Anthony J. Paulson, Anne L. Gartner
2013, Open-File Report 2013-1117
In 1994, the U.S. Geological Survey (USGS), in cooperation with the U.S. Navy, deployed three sets of moorings in Sinclair Inlet, which is a relatively small embayment on the western side of Puget Sound (fig. 1). This inlet is home to the Puget Sound Naval Shipyard. One purpose of the...
Automated quantitative micro-mineralogical characterization for environmental applications
Kathleen S. Smith, K.O. Hoal, Katherine Walton-Day, J.G. Stammer, K. Pietersen
2013, Conference Paper
Characterization of ore and waste-rock material using automated quantitative micro-mineralogical techniques (e.g., QEMSCAN® and MLA) has the potential to complement traditional acid-base accounting and humidity cell techniques when predicting acid generation and metal release. These characterization techniques, which most commonly are used for metallurgical, mineral-processing, and geometallurgical applications, can be...
Regional maps of subsurface geopressure gradients of the onshore and offshore Gulf of Mexico basin
Lauri A. Burke, Scott A. Kinney, Russell F. Dubiel, Janet K. Pitman
2013, Open-File Report 2013-1058
The U.S. Geological Survey created a comprehensive geopressure-gradient model of the regional pressure system spanning the onshore and offshore Gulf of Mexico basin, USA. This model was used to generate ten maps that included (1) five contour maps characterizing the depth to the surface defined by the first occurrence of...
Characterization and conceptualization of groundwater flow systems
Niel Plummer, W. E. Sanford, P. D. Glynn
2013, Book chapter, Isotope Methods for Dating Old Groundwater
This chapter discusses some of the fundamental concepts, data needs and approaches that aid in developing a general understanding of a groundwater system. Principles of the hydrological cycle are reviewed; the processes of recharge and discharge in aquifer systems; types of geological, hydrological and hydraulic data needed to describe the...
Defining groundwater age
T. Torgersen, R. Purtschert, F. M. Phillips, Niel Plummer, W. E. Sanford, A. Suckow
2013, Book chapter, Isotope Methods for Dating Old Groundwater
This book investigates applications of selected chemical and isotopic substances that can be used to recognize and interpret age information pertaining to ‘old’ groundwater (defined as water that was recharged on a timescale from approximately 1000 to more than 1 000 000 a). However, as discussed below, only estimates of...
Radiocarbon dating in groundwater systems
Niel Plummer, P. D. Glynn
2013, Book chapter, Isotope Methods for Dating Old Groundwater
The radioactive isotope of carbon, radiocarbon (14C), was first produced artificially in 1940 by Martin Kamen and Sam Ruben, who bombarded graphite in a cyclotron at the Radiation Laboratory at Berkeley, CA, in an attempt to produce a radioactive isotope of carbon that could be used as a tracer in...
Numerical flow models and their calibration using tracer based ages
W. Sanford
2013, Book chapter, Isotope Methods for Dating Old Groundwater
Any estimate of ‘age’ of a groundwater sample based on environmental tracers requires some form of geochemical model to interpret the tracer chemistry (chapter 3) and is, therefore, referred to in this chapter as a tracer model age. the tracer model age of a groundwater sample can be useful for...
Rediscovering traditional vegetation management in preserves: trading experiences between cultures and continents
Beth A. Middleton
2013, Biological Conservation (158) 271-279
Land managers are grappling with massive changes in vegetation structure, particularly in protected areas formerly subjected to fire and grazing. The objective of this review was to compare notes on the historical and current management of ecosystems around the world (especially in wet to dry grasslands in the Americas, Australia,...
Phast4Windows: A 3D graphical user interface for the reactive-transport simulator PHAST
Scott R. Charlton, David L. Parkhurst
2013, Groundwater (51) 623-628
Phast4Windows is a Windows® program for developing and running groundwater-flow and reactive-transport models with the PHAST simulator. This graphical user interface allows definition of grid-independent spatial distributions of model properties—the porous media properties, the initial head and chemistry conditions, boundary conditions, and locations of wells, rivers, drains, and accounting zones—and...
Inferring fault rheology from low-frequency earthquakes on the San Andreas
Nicholas M. Beeler, Amanda Thomas, Roland Bürgmann, David R. Shelly
2013, Journal of Geophysical Research (118) 5976-5990
Families of recurring low-frequency earthquakes (LFEs) within nonvolcanic tremor (NVT) on the San Andreas fault in central California show strong sensitivity to shear stress induced by the daily tidal cycle. LFEs occur at all levels of the tidal shear stress and are in phase with the very small, ~400 Pa, stress...
Water resources of Natchitoches Parish, Louisiana
Robert B. Fendick Jr., Larry B. Prakken, Jason M. Griffith
2013, Fact Sheet 2013-3012
In 2005, about 33.8 million gallons per day (Mgal/d) was withdrawn from water sources in Natchitoches Parish, Louisiana. Surface water sources accounted for about 86 percent (29.2 Mgal/d) of all withdrawals whereas groundwater sources accounted for about 14 percent (4.62 Mgal/d). Withdrawals for industrial use accounted for about 42 percent...
Water resources of Plaquemines Parish, Louisiana
Larry B. Prakken
2013, Fact Sheet 2013-3031
In 2010, about 85.1 million gallons per day (Mgal/d) of water were withdrawn in Plaquemines Parish, Louisiana. Surface-water sources accounted for almost all withdrawals; groundwater sources accounted for only 0.04 Mgal/d. Industrial use accounted for about 92 percent of the total water withdrawn. Other categories of use included public supply,...
Evidence of territoriality and species interactions from spatial point-pattern analyses of subarctic-nesting geese
Matthew Reiter, David E. Andersen
2013, PLoS ONE (8)
Quantifying spatial patterns of bird nests and nest fate provides insights into processes influencing a species’ distribution. At Cape Churchill, Manitoba, Canada, recent declines in breeding Eastern Prairie Population Canada geese (Branta canadensis interior) has coincided with increasing populations of nesting lesser snow geese (Chen caerulescens caerulescens) and Ross’s geese...
Multi-species call-broadcast improved detection of endangered Yuma clapper rail compared to single-species call-broadcast
Christopher P. Nadeau, Courtney J. Conway, Linden Piest, William P. Burger
2013, Wetlands (33) 699-706
Broadcasting calls of marsh birds during point-count surveys increases their detection probability and decreases variation in the number of birds detected across replicate surveys. However, multi-species monitoring using call-broadcast may reduce these benefits if birds are reluctant to call once they hear broadcasted calls of other species. We compared a...
Case study Middle Rio Grande Basin, New Mexico, USA
Niel Plummer, W. Sanford
2013, Book chapter, Isotope Methods for Dating Old Groundwater
Chemical and isotopic patterns in groundwater can record characteristics of water sources, flow directions, and groundwater-age information. This hydrochemical information can be useful in refining conceptualization of groundwater flow, in calibration of numerical models of groundwater flow, and in estimation of paleo and modern recharge rates. This case...
The role of airborne mineral dusts in human disease
Suzette A. Morman, Geoffrey S. Plumlee
2013, Aeolian Research (9) 203-212
Exposure to fine particulate matter (PM) is generally acknowledged to increase risk for human morbidity and mortality. However, particulate matter (PM) research has generally examined anthropogenic (industry and combustion by-products) sources with few studies considering contributions from geogenic PM (produced from the Earth by natural processes, e.g., volcanic ash, windborne...