Geoacoustic inversion for a New England mud patch sediment using the silt-suspension theory of marine mud
Elisabeth M. Brown, Ying-Tsong Lin, Jason Chaytor, William L. Siegmann
2020, IEEE Journal of Oceanic Engineering (45) 144-160
This article provides an application of the silt-suspension theory to a Bayesian-inference inversion for the geo-acoustic parameters in marine mud. The theory, with consequences that have been developed recently, postulates a suspension of water and clay mineral card-houses that supports moderately dilute concentrations of silt particles. The approach is an...
Spatial variability of phytoplankton in a shallow tidal freshwater system reveals complex controls on abundance and community structure
Elizabeth B. Stumpner, Brian A. Bergamaschi, Tamara E. C. Kraus, Alexander Parker, Francis Wilkerson, Bryan D. Downing, Richard Dugdale, Michael T. Murrell, Kurt D. Carpenter, James Orlando, Carol Kendall
2020, Science of the Total Environment (700)
Estuaries worldwide are undergoing changes to patterns of aquatic productivity because of human activities that alter flow, impact sediment delivery and thus the light field, and contribute nutrients and contaminants like pesticides and metals. These changes can influence phytoplankton communities, which in turn can...
Effects of climate-related variability in storage on streamwater solute concentrations and fluxes in a small forested watershed in the Southeastern United States
Brent T. Aulenbach
2020, Hydrological Processes (34) 189-208
Streamwater quality can be affected by climate-related variability in hydrologic state, which controls flow paths and affects biogeochemical processes. Thirty-one years of input/output solute fluxes at Panola Mountain Research Watershed, a small, forested, seasonally water-limited watershed near Atlanta, Georgia, were used to quantify the effects of climatic-related variability in storage...
Body shape is related to the attempt rate and passage success of brook trout at in-stream barriers
Elsa Goerig, Ben A. Wasserman, Theodore R. Castro-Santos, Eric P. Palkovacs
2020, Journal of Applied Ecology (57) 91-100
The ability to move between habitats has important implications for fitness in many species. In-stream barriers such as culverts can impede movements of riverine fishes and thus reduce connectivity between habitats. The ability of fish to overcome barriers is related to the features of the environment and the barrier...
Historical changes in fish communities in urban streams of the southeastern U.S. and the relative importance of water-quality stressors
Michael R. Meador
2020, Ecology of Freshwater Fish (29) 156-169
A total of 71 stream sites representing a gradient of urban land use was sampled across the Piedmont of the southeastern U.S. in 2014. Fish data collected (observed) at each site were compared to an expected community based on georeferenced historical (~1950 - ~1990) species occurrence records for stream...
Regional Global Navigation Satellite System networks for crustal deformation monitoring
Jessica R. Murray, Noel Bartlow, Yehuda Bock, Benjamin A. Brooks, James H. Foster, Jeffery T. Freymueller, William C. Hammond, Kathleen Hodgkinson, Ingrid A. Johanson, Alberto Lopez-Venegas, Doerte Mann, Glen Mattioli, Timothy Melbourne, David Mencin, Emily K. Montgomery-Brown, Mark Hunter Murray, Robert Smalley Jr., Valerie Thomas
2020, Seismological Research Letters (91) 552-572
Regional networks of Global Navigation Satellite System (GNSS) stations cover seismically and volcanically active areas throughout the United States. Data from these networks have been used to produce high‐precision, three‐component velocity fields covering broad geographic regions as well as position time series that track time‐varying crustal deformation. This information has...
De facto water reuse: Bioassay suite approach delivers depth and breadth in endocrine active compound detection
Elizabeth K Medlock Kakaley, Brett R. Blackwell, Mary C. Cardon, Justin M. Conley, Nicola Evans, David J. Feifarek, Edward Furlong, Susan T. Glassmeyer, L. Earl Gray, Phillip C. Hartig, Dana W. Kolpin, Marc A. Mills, Laura Rosenblum, Daniel L. Villeneuve, Vickie S. Wilson
2020, Science of the Total Environment (699) 1-12
Although endocrine disrupting compounds (EDCs) have been detected in wastewater and surface waters worldwide using a variety of in vitro effects-based screening tools, e.g. bioassays, few have examined potential attenuation of environmental contaminants by both natural (sorption, degradation, etc) and anthropogenic (water treatment practices) processes. This study used several bioassays...
Permafrost hydrology drives the assimilation of old carbon by stream food webs in the Arctic
Jonathon A O'Donnell, Michael P. Carey, Joshua C. Koch, Xiaomei Xu, Brett Poulin, Jennifer Walker, Christian E. Zimmerman
2020, Ecosystems (23) 435-453
Permafrost thaw in the Arctic is mobilizing old carbon (C) from soils to aquatic ecosystems and the atmosphere. Little is known, however, about the assimilation of old C by aquatic food webs in Arctic watersheds. Here, we used C isotopes (δ13C, Δ14C) to quantify C assimilation by biota across 12...
The influence of sample matrix on the accuracy of nitrite N and O isotope ratio analyses with the azide method
Julie Granger, Danielle S. Boshers, J.K. Bohlke, Dan Yu, Nengwang Chen, Craig R. Tobias
2020, Rapid Communications in Mass Spectrometry (34)
RationaleThe isotope ratios of nitrogen (15N/14N) and oxygen (18O/16O) in nitrite (NO2−) can be measured by conversion of the nitrite into nitrous oxide (N2O) with azide, followed by mass spectrometric analysis of N2O by gas chromatography isotope ratio mass spectrometry (GC/IRMS). While applying this method to brackish...
A meta-analysis of global crop water productivity of three leading world crops (wheat, corn, and rice) in the irrigated areas over three decades
Daniel J. Foley, Prasad Thenkabail, Itiya Aneece, Pardhasaradhi Teluguntla, Adam Oliphant
2020, International Journal of Digital Earth (13) 939-975
The overarching goal of this study was to perform a comprehensive meta-analysis of irrigated agricultural Crop Water Productivity (CWP) of the world’s three leading crops: wheat, corn, and rice based on three decades of remote sensing and non-remote sensing-based studies. Overall, CWP data from 148 crop growing study sites (60...
Species-specific responses to wetland mitigation among amphibians in the Greater Yellowstone Ecosystem
LK Swartz, WH Lowe, Erin L. Muths, Blake R. Hossack
2020, Restoration Ecology (28) 206-214
Habitat loss and degradation are leading causes of biodiversity declines, therefore assessing the capacity of created mitigation wetlands to replace habitat for wildlife has become a management priority. We used single season occupancy models to compare the occurrence of larvae of four species of pond‐breeding amphibians in wetlands created for...
Maximum entropy derived statistics of sound speed structure in a fine-grained sediment inferred from sparse broadband acoustic measurements on the New England continental shelf
David P. Knobles, Preston S. Wilson, J.A. Goff, L. Wan, M.J. Buckingham, Jason Chaytor, Mohsen Badiey
2020, IEEE Journal of Oceanic Engineering (45) 161-173
Marginal probability distributions for parameters representing an effective sound-speed structure of a fine-grained sediment are inferred from a data ensemble maximum entropy method that utilizes a sparse spatially distributed set of received pressure time series resulting from multiple explosive sources in a shallow-water ocean environment possessing significant spatial variability of...
Social attraction used to establish Caspian tern nesting colonies in San Francisco Bay
C. Alex Hartman, Joshua T. Ackerman, Mark P. Herzog, Cheryl Strong, David A Trachtenbarg
2020, Global Ecology and Conservation (20)
Conservation of colonial waterbird breeding populations often includes restoring historic nesting habitat or establishing new nesting habitat in protected areas. However, colonization of new or restored nesting habitat may be hindered by the lack of social cues from nesting conspecifics to attract prospecting birds. Social attraction, whereby decoys and colony...
Global change-driven use of onshore habitat impacts polar bear faecal microbiota
Sophie Watson, Heidi Hauffe, Matthew Bull, Todd C. Atwood, Melissa McKinney, Massimo Pindo, Sarah Perkins
2020, ISME Journal (13) 2916-2926
The gut microbiota plays a critical role in host health, yet remains poorly studied in wild species. Polar bears (Ursus maritimus), key indicators of Arctic ecosystem health and environmental change, are currently affected by rapid shifts in habitat that may alter gut homeostasis. Declining sea ice has led to...
Using carbon isotope ratios to verify predictions of a model simulating the interaction between coastal plant communities and their effect on ground water salinity
Suresh C. Subedi, Leonel Sternberg, Donald L. DeAngelis, Michael S. Ross, Danielle Ogarcak
2020, Ecosystems (23) 570-585
As sea level rises in low-lying coastal islands, salt-tolerant (halophytic) coastal vegetation communities may be able to migrate inland, replacing the freshwater vegetation that is unable to tolerate salt stress. The pace of such shifts may be accelerated by a self-reinforcing feedback between the halophytic vegetation and salinity, as well...
Using full and partial unmixing algorithms to estimate the inundation extent of small, isolated stock ponds in an arid landscape
Christopher Jarchow, Brent H. Sigafus, Erin L. Muths, Blake R. Hossack
2020, Wetlands (40) 563-575
Many natural wetlands around the world have disappeared or been replaced, resulting in the dependence of many wildlife species on small, artificial earthen stock ponds. These ponds provide critical wildlife habitat, such that the accurate detection of water and assessment of inundation extent is required. We applied a full (linear...
Harvest–release decisions in recreational fisheries
Mark A Kaemingk, Keith L. Hurley, Christopher J. Chizinski, Kevin L. Pope
2020, Canadian Journal of Fisheries and Aquatic Sciences (77) 194-201
Most fishery regulations aim to control angler harvest. Yet, we lack a basic understanding of what actually determines the angler’s decision to harvest or release fish caught. We used XGBoost, a machine learning algorithm, to develop a predictive angler harvest–release model by taking advantage of an extensive recreational fishery data...
Light exposure along particle flowpaths in large rivers
John R. Gardner, Scott H. Ensign, Jeffrey N. Houser, Martin W. Doyle
2020, Limnology and Oceanography (65) 128-142
Sunlight is a critical resource in aquatic systems driving photosynthesis, photodegradation of organic matter and contaminants, animal behavior, and the activity of human pathogens. In rivers, solutes, materials, and organisms are turbulently mixed across the water column during downstream transport and exposed to highly variable sunlight. However, there are no...
In situ benthic nutrient flux and sediment oxygen demand in Barnegat Bay, New Jersey
Timothy P. Wilson, Vincent T. DePaul
2020, Journal of Coastal Research (78) 46-59
The U.S. Geological Survey, in cooperation with the New Jersey Department of Environmental Protection, measured sediment oxygen demand (SOD) and benthic nutrient fluxes throughout Barnegat Bay, New Jersey. SOD was determined in situ using chambers equipped with optical dissolved oxygen sensors. The benthic nutrient fluxes of ammonia (NH3), nitrite +...
Investigating bedload transport under asymmetrical waves using a coupled ocean-wave model
Tarandeep S. Kalra, Christopher R. Sherwood, John C. Warner, Yashar Rafati, Tian Jian Hsu
2020, Conference Paper
Transport by asymmetrical wave motions plays a key role in cross-shore movement of sand, which is important for bar migration, exchange through tidal inlets, and beach recovery after storms. We have implemented a modified version of the SANTOSS formulation in the three-dimensional open-source Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) modeling framework. The calculation...
Modeling the morphological response of a barrier island to Hurricane Matthew
Ellen Quataert, Marlies van der Lugt, Christopher R. Sherwood, Maarten van Oormondt, Ap van Dongeran
2020, Conference Paper, Coastal sediments 2019: Proceedings of the 9th international conference
Surge and wave forcing from Hurricane Matthew caused a breach south of Matanzas Inlet (FL, USA) on a complex barrier island, including sandy dunes, hard structures (residential buildings and a highway), wetlands, and the US Intracoastal Waterway. In this paper, the skill of the XBeach model to predict hurricane-induced barrier...
Hydroseeding tackifiers and dryland moss restoration potential
W. Dillon Blankenship, Lea A. Condon, David A. Pyke
2020, Restoration Ecology (28) S127-S138
Tackifiers are long‐chain carbon compounds used for soil stabilization and hydroseeding and could provide a vehicle for biological soil crust restoration. We examined the sensitivity of two dryland mosses, Bryum argenteum and Syntrichia ruralis, to three common tackifiers ‐ guar, psyllium, and polyacrylamide (PAM) ‐ at 0.5x, 1.0x, and 2.0x of recommended (x) concentrations...
Bridging the gap between salmon spawner abundance and marine nutrient assimilation by juvenile salmon: Seasonal cycles and landscape effects at the watershed scale
Philip J. Joy, Craig A. Stricker, Renae Ivanoff, Mark S. Wipfli, Andrew C. Seitz, Matthew Tyers
2020, Ecosystems (23) 338-358
Anadromous Pacific salmon are semelparous, and resource subsidies from spawning adults (marine-derived nutrients, or MDN) benefit juvenile salmonids rearing in freshwater. However, it remains unclear how MDN assimilation relates to spawner abundance within a watershed. To address this, we examined seasonal, watershed-scale patterns of MDN assimilation...
Revisiting “An Exercise in Groundwater Model Calibration and Prediction” after 30 years: Insights and New Directions
Randall J. Hunt, Michael N. Fienen, Jeremy T. White
2020, Groundwater (58) 168-182
In 1988, an important publication moved model calibration and forecasting beyond case studies and theoretical analysis. It reported on a somewhat idyllic graduate student modeling exercise where many of the system properties were known; the primary forecasts of interest were heads in pumping wells after a...
Using environmental DNA (eDNA) to assess the presence of cavefish and cave crayfish populations in caves of the Ozark Highlands
Shannon K. Brewer, Joshua B. Mouser, Ronald A. Van Den Bussche
2020, Cooperator Science Series CSS-135-2020
Many cavefishes and cave crayfishes are considered of conservation concern; however, sampling these species is inherently difficult given their occupied environments. The goal of our project was to verify the presence of select karst organisms while developing the foundation for sampling approaches that might be useful to conservation and management...
