Offshore shallow structure and sediment distribution, Point Sur to Point Arguello, central California
Samuel Y. Johnson, Stephen R. Hartwell, Janet T. Watt, Jeffrey W. Beeson, Peter Dartnell
2019, Open-File Report 2018-1158
This publication consists of three map sheets that display shallow geologic structure, along with sediment distribution and thickness, for an about 225-km-long offshore section of the central California coast between Point Sur and Point Arguello. Each map sheet includes three maps, at scales of either 1:150,000 or 1:200,000, as well...
Observations of American Shad Alosa sapidissima approaching and using a vertical slot fishway at the head-of-tide Brunswick Dam on the Androscoggin River, Maine
Daniel M. Weaver, Michael Brown, Joseph D. Zydlewski
2019, Fisheries Bulletin (39) 989-998
American Shad Alosa sapidissima have historically supported an important fishery along the Atlantic coastal waters of North America. However, the construction of dams reduced populations and restricted landings. Fishways are intended to mitigate obstacles to anadromous fish migrations, but a thorough evaluation of their efficiency is warranted. We...
Age truncation of alewife in Lake Michigan
T. Vidal, Brian J. Irwin, Charles P. Madenjian, Seth Wenger
2019, Journal of Great Lakes Research (45) 958-968
Empirical evidence has shown increased variability in harvest and recruitment of exploited fish populations, which can result directly from exploitation or indirectly from interactions between external drivers and the internal dynamics of age-structured populations. We investigated whether predation in a freshwater...
Cohesive framework for modeling plant cover class data
Kathryn Irvine, Wilson J. Wright, Erin K. Shanahan, Thomas J. Rodhouse
2019, Methods in Ecology and Evolution (10) 1749-1760
The study of plant distribution and abundance is a fundamental pursuit in ecology and conservation biology. Measuring plant abundance by visually assessing percent cover and recording a cover class is a common field method that yields ordinal data. Statistical models for ordinal data exist but entail cumbersome interpretations and...
Crustal architecture beneath the southern Midcontinent (USA) and controls on Mesoproterozoic iron-oxide mineralization from 3D geophysical models
Anne E. McCafferty, Jeffrey D. Phillips, Albert H. Hofstra, Warren C. Day
2019, Ore Geology Reviews (111)
Several types of critical mineral-bearing ore deposits in the southern Midcontinent region of the U.S. are hosted in Mesoproterozoic igneous rocks largely concealed beneath Paleozoic cover. Discerning the architecture of igneous intrusions and volcanic centers in the crust is fundamental to understanding the geologic evolution of this vast region and...
Filling knowledge gaps in a threatened shorebird flyway through satellite tracking
Yin-Chi Chan, T. Lee Tibbitts, Tamar Lok, Chris Hassell, He-Bo Peng, Zhijun Ma, Zhengwang Zhang, Theunis Piersma
2019, Journal of Applied Ecology (56) 2305-2315
Satellite‐based technologies that track individual animal movements enable the mapping of their spatial and temporal patterns of occurrence. This is particularly useful in poorly studied or remote regions where there is a need for the rapid gathering of relevant ecological knowledge to inform management actions. One such region is...
Water-quality, bed-sediment, and biological data (October 2016 through September 2017) and statistical summaries of data for streams in the Clark Fork Basin, Montana
Tom Cleasby, Michelle I. Hornberger, Terry L. Heinert, Matthew A. Turner
2019, Open-File Report 2019-1060
Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, to characterize...
Black bears alter movements in response to anthropogenic features with time of day and season
Katherine A. Zeller, David Wattles, Laura Conlee, Stephen DeStefano
2019, Movement Ecology (7)
BackgroundWith the growth and expansion of human development, large mammals will increasingly encounter humans, elevating the likelihood of human-wildlife conflicts. Understanding the behavior and movement of large mammals, particularly around human development, is important for crafting effective conservation and management plans for these species.MethodsWe used GPS...
Heat flow in the Western Arctic Ocean (Amerasian Basin)
Carolyn D. Ruppel, A.H. Lachenbruch, Deborah Hutchinson, Robert Munroe, David Mosher
2019, Journal of Geophysical Research B: Solid Earth (124) 7562-7587
From 1963 to 1973 the U.S. Geological Survey (USGS) measured heat flow at 356 sites in the Amerasian Basin (Western Arctic Ocean) from a drifting ice island (T-3). The resulting measurements, which are unevenly distributed on Alpha-Mendeleev Ridge (AMR) and in Canada and Nautilus basins, greatly expand available heat flow...
A phylogenomic supertree of birds
Rebecca T Kimball, Carl H Oliveros, Ning Wang, Noor D White, F. Keith Barker, Daniel J Field, Daniel T Ksepka, Terry Chesser, Robert G Moyle, Michael J Braun, Robb T Brumfield, Brant C Faircloth, Brian Tilston-Smith, Edward L Braun
2019, Diversity (11) 35
It has long been appreciated that analyses of genomic data (e.g., whole genome sequencing or sequence capture) have the potential to reveal the tree of life, but it remains challenging to move from sequence data to a clear understanding of evolutionary history, in part due to the computational challenges of...
Bundle adjustment using space based triangulation method for improving the Landsat global ground reference
James C. Storey, R. Rengarajan, Mike Choate
Michael J. Choate, editor(s)
2019, Remote Sensing (11)
There is an ever-increasing interest and need for accurate geo-registration of remotely sensed data products to a common global geometric reference. Although the geo-registration has improved significantly in the last decade, the lack of an accurate global ground reference dataset poses serious issues for data providers seeking to make geometrically stackable...
Nest structure affects auditory and visual detectability, but not predation risk, in a tropical songbird community
James C. Mouton, Thomas E. Martin
2019, Functional Ecology (33) 1973-1981
Offspring mortality varies dramatically among species with critical demographic and evolutionary ramifications, yet the causes of this variation remain unclear. Nests are widely used for breeding across taxa and thought to influence offspring mortality risk. Traditionally, more complex, enclosed nest structures are thought to reduce offspring predation by reducing...
Predictive analysis using chemical-gene interaction networks consistent with observed endocrine activity and mutagenicity of U.S. streams
Jason P. Berninger, David M. DeMarini, Sarah H. Warren, Jane Ellen Simmons, Vickie S. Wilson, Justin M. Conley, Mikayla D. Armstrong, Dana W. Kolpin, Kathryn Kuivila, Timothy J. Reilly, Kristin M. Romanok, Daniel L. Villeneuve, Paul M. Bradley, Luke R. Iwanowicz
2019, Environmental Science & Technology (53) 8611-8620
In a recent U.S. Geological Survey/U.S. Environmental Protection Agency study assessing >700 organic compounds in 38 streams, in vitro assays indicated generally low estrogen, androgen, and glucocorticoid receptor activities, but identified 13 surface waters with 17β estradiol equivalent (E2Eq) activities greater than the 1 ng/L level of concern for feminization...
Landscape-scale greater prairie-chicken–habitat relations and the Conservation Reserve Program
Kalysta Adkins, Charlotte L. Roy, David E. Andersen, Robert G. Wright
2019, Journal of Wildlife Management (83) 1415-1426
Both the abundance of greater prairie-chickens (Tympanuchus cupido pinnatus) and the area of grassland enrolled in the Conservation Reserve Program (CRP) in northwestern Minnesota, USA, have recently declined. Although wildlife conservation is a stated objective of the CRP, the impact of the CRP on greater prairie-chicken populations has not been...
Hydrologic study at Farm Creek Marsh, Dorchester County, Maryland, from April 2015 to April 2016
Charles W. Walker, Todd R. Lester, Christopher W. Nealen
2019, Scientific Investigations Report 2019-5032
In 2015, the U.S. Geological Survey began a 1-year hydrologic study to investigate the extent and cause of inundation at Farm Creek Marsh, in Dorchester County, Maryland. In combination with a tide and precipitation gage, a representative section of the marsh was instrumented with surface-water monitors and shallow groundwater piezometers...
Lidar-based approaches for estimating solar insolation in heavily forested streams
Jeffrey J Richardson, Christian E. Torgersen, L Monika Moskal
2019, Hydrology and Earth System Sciences (23) 2813-2822
Methods to quantify solar insolation in riparian landscapes are needed due to the importance of stream temperature to aquatic biota. We have tested three lidar predictors using two approaches developed for other applications of estimating solar insolation from airborne lidar using field data...
Are polar bear habitat resource selection functions developed from 1985-1996 data still useful?
George M. Durner, David C. Douglas, Todd C. Atwood
2019, Ecology and Evolution (9) 8625-8638
1. Greenhouse gas-induced warming in the Arctic has caused declines in sea ice extent and changed its composition, raising concerns by all circumpolar nations for polar bear conservation. 2. Negative impacts have been observed in three well-studied polar bear subpopulations. Most subpopulations, however, receive little or no direct monitoring, hence, resource selection...
Locating shallow seismic sources with waves scattered by surface topography: Validation of the method at the Nevada Test Site
Nian Wang, Yang Shen, Xueyang Bao, Ashton F. Flinders
2019, Journal of Geophysical Research B: Solid Earth (124) 7040-7051
Accurate and robust source location is fundamental in seismology. Previously, we proposed a new full waveform location method using waves scattered by topography near the source, and we demonstrated its potential in obtaining accurate source location using synthetic data. In the work presented here, we validate this method with observed...
A network approach to prioritize conservation efforts for migratory birds
Yanjie Xu, Yali Si, John Takekawa, Qiang Liu, Herbert H.T. Prins, Shenglai Yin, Diann J. Prosser, Peng Gong, Willem F. de Boer
2019, Conservation Biology (34) 416-426
Habitat loss can trigger migration network collapse by isolating migratory birds’ breeding grounds from non-breeding grounds. Theoretically, habitat loss can have vastly different impacts depending on the site’s importance within the migratory corridor. However, migration network connectivity and the impacts of site loss are not completely understood. Here we used...
Inorganic nitrogen wet deposition gradients in the Denver-Boulder metropolitan area and Colorado Front Range – Preliminary implications for Rocky Mountain National Park and interpolated deposition maps
Gregory A. Wetherbee, Katherine Benedict, Sheila F. Murphy, Emily Elliott
2019, Science of the Total Environment (691) 1027-1042
For the first time in the 40-year history of the National Atmospheric Deposition Program / National Trends Network (NADP/NTN), a unique urban-to-rural transect of wet deposition monitoring stations were operated as part of the NTN in 2017 to quantify reactive inorganic nitrogen wet deposition for adjacent urban and rural, montane...
Hydrologic site assessment for passive treatment of groundwater nitrogen with permeable reactive barriers, Cape Cod, Massachusetts
Jeffrey R. Barbaro, Marcel Belaval, Danna B. Truslow, Denis R. LeBlanc, Thomas C. Cambareri, Scott C. Michaud
2019, Scientific Investigations Report 2019-5047
Wastewater disposal associated with rapid population growth and development on Cape Cod, Massachusetts, during the past several decades has resulted in widespread contamination of groundwater with nitrogen. As a result, water quality in many of the streams, lakes, and coastal embayments on Cape Cod is impaired by excess nitrogen. To...
Modeling transient soil moisture limitations on microbial carbon respiration: A cost-performance comparison
Yuchen Liu, Corey R. Lawrence, Mathew Winnick, Hsiao-Tieh Hsu, Katherine Maher, Jennifer Druhan
2019, Biogeosciences (124) 2222-2247
Soil microorganisms are known to survive periods of aridity and to recover rapidly after wetting events, with the ability to transition between a dormant state in dry conditions and an active state in wet conditions. Though this dynamic behavior has been previously incorporated into soil carbon respiration modeling frameworks, a...
Potential vulnerability of 348 herbaceous species to atmospheric deposition of nitrogen and sulfur in the United States
Christopher M. Clark, Samuel M. Simkin, Edith B. Allen, William D. Bowman, Jayne Belnap, Matthew L. Brooks, Scott L. Collins, Linda H Geiser, Frank S Gilliam, Sarah E. Jovan, Linda H Pardo, Bethany K Schultz, Carly J. Stevens, Katharine N. Suding, Heather L. Throop, Donald M. Waller
2019, Nature Plants (5) 697-705
Atmospheric nitrogen and sulfur pollution increased over much of the United States during the twentieth century from fossil fuel combustion and industrial agriculture. Despite recent declines, nitrogen and sulfur deposition continue to affect many plant communities in the United States, although which species are at risk remains uncertain. We used...
Sharp savanna-forest transitions in the Midwest followed environmental gradients but are absent from the modern landscape
Caitlin M. Broderick, Kelly A Heilman, Tamatha Patterson, Jody Peters, Jason S. McLachlan
2019, The American Midland Naturalist (180) 1-17
Historically, closed eastern forests transitioned into open savannas and prairies in the US Midwest, but this transition is poorly understood. To investigate the eastern boundary of the prairie-forest ecotone, we conducted a case study of historic and modern vegetation patterns of the Yellow River watershed in northwest Indiana. Historic vegetation...
Strategic directions of the USGS water mission area’s fluvial sediment science program
Molly S. Wood, Timothy D. Straub
2019, Conference Paper, Proceedings of SEDHYD 2019
The USGS Water Mission Area’s Sediment Science Program provides leadership, training, and methods development in fluvial sediment science for the USGS and its external partners. Overarching objectives of the USGS Sediment Science Program (which includes the Federal Interagency Sedimentation Project) include: 1) developing and promoting innovative sediment monitoring techniques that result in cost effective,...