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Publication Extents

Not all publications have extents, not all extents are completely accurate
Quantifying climate-related interactions in shallow and deep storage and evapotranspiration in a forested, seasonally water-limited watershed in the Southeastern United States
Brent T. Aulenbach, Norman E. Peters
2018, Water Resources Research (54) 3037-3061
The Southeastern United States experiences recurring hydrological droughts, which can reduce water availability and can result in water-limiting conditions. Long-term monitoring at Panola Mountain Research Watershed, a small, forested, seasonally water-limited watershed near Atlanta, Georgia, was used to quantify the interactions of climatic variability with shallow and deep storage and...
Documentation of particle-size analyzer time series, and discrete suspended-sediment and bed-sediment sample data collection, Niobrara River near Spencer, Nebraska, October 2014
Nathaniel J. Schaepe, Anthony M. Coleman, Ronald B. Zelt
2018, Data Series 1079
The U.S. Geological Survey (USGS), in cooperation with the U.S. Army Corps of Engineers, monitored a sediment release by Nebraska Public Power District from Spencer Dam located on the Niobrara River near Spencer, Nebraska, during the fall of 2014. The accumulated sediment behind Spencer Dam ordinarily is released semiannually; however,...
Model structure of the stream salmonid simulator (S3)—A dynamic model for simulating growth, movement, and survival of juvenile salmonids
Russell W. Perry, John M. Plumb, Edward C. Jones, Nicholas A. Som, Nicholas J. Hetrick, Thomas B. Hardy
2018, Open-File Report 2018-1056
Fisheries and water managers often use population models to aid in understanding the effect of alternative water management or restoration actions on anadromous fish populations. We developed the Stream Salmonid Simulator (S3) to help resource managers evaluate the effect of management alternatives on juvenile salmonid populations. S3 is a...
Movements and habitat use locations of manatees within Kings Bay Florida during the Crystal River National Wildlife Refuge winter season (November 15–March 31)
Daniel H. Slone, Susan M. Butler, James P. Reid
2018, Open-File Report 2018-1051
Kings Bay, Florida, is one of the most important natural winter habitat locations for the federally threatened Trichechus manatus latirostris (Florida manatee). Crystal River National Wildlife Refuge was established in 1983 specifically to provide protection for manatees and their critical habitat. To aid managers at the refuge and other agencies...
Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska
Andrew B. Reeves, Jeffery S. Hall, Rebecca L. Poulson, Tyrone F. Donnelly, David E. Stallknecht, Andrew M. Ramey
2018, PLoS ONE (13)
Western Alaska is a potential point-of-entry for foreign-origin influenza A viruses (IAVs) into North America via migratory birds. We sampled waterfowl and gulls for IAVs at Izembek National Wildlife Refuge (NWR) in western Alaska, USA, during late summer and autumn months of 2011–2015, to evaluate the abundance and diversity of...
Connectivity of streams and wetlands to downstream waters: An integrated systems framework
Scott G. Leibowitz, Parker J. Wigington, Kate A. Schoefield, Laurie C. Alexander, Melanie K. Vanderhoof, Heather E. Golden
2018, Journal of the American Water Resources Association (54) 298-322
Interest in connectivity has increased in the aquatic sciences, partly because of its relevance to the Clean Water Act. This paper has two objectives: (1) provide a framework to understand hydrological, chemical, and biological connectivity, focusing on how headwater streams and wetlands connect to and contribute to rivers; and (2)...
Biota connect aquatic habitats throughout freshwater ecosystem mosaics
Kate A. Schofield, Laurie C. Alexander, Caroline E. Ridley, Melanie K. Vanderhoof, Ken M. Fritz, Bradley Autrey, Julie DeMeester, William G. Kepner, Charles R. Lane, Scott Leibowitz, Amina I. Pollard
2018, Journal of the American Water Resources Association (54) 372-399
Freshwater ecosystems are linked at various spatial and temporal scales by movements of biota adapted to life in water. We review the literature on movements of aquatic organisms that connect different types of freshwater habitats, focusing on linkages from streams and wetlands to downstream waters. Here, streams, wetlands, rivers, lakes,...
Featured collection introduction: Connectivity of streams and wetlands to downstream waters
Laurie C. Alexander, Ken M. Fritz, Kate Schofield, Bradley Autrey, Julie DeMeester, Heather E. Golden, David C. Goodrich, William G. Kepner, Hadas R. Kiperwas, Charles R. Lane, Stephen D. LeDuc, Scott Leibowitz, Michael G. McManus, Amina I. Pollard, Caroline E. Ridley, Melanie K. Vanderhoof, Parker J. Wigington
2018, Journal of the American Water Resources Association (54) 287-297
Connectivity is a fundamental but highly dynamic property of watersheds. Variability in the types and degrees of aquatic ecosystem connectivity presents challenges for researchers and managers seeking to accurately quantify its effects on critical hydrologic, biogeochemical, and biological processes. However, protecting natural gradients of connectivity is key to protecting the...
Herbivory and eutrophication mediate grassland plant nutrient responses across a global climatic gradient
T. Michael Anderson, Daniel M. Griffith, James B. Grace, Eric M. Lind, Peter B. Adler, Lori A. Biederman, Dana M. Blumenthal, Pedro Daleo, Jennifer Firn, Nicole Hagenah, W. Stanley Harpole, Andrew S. MacDougall, Rebecca L. McCulley, Suzanne M. Prober, Anita C. Risch, Mahesh Sankaran, Martin Schutz, Eric W. Seabloom, Carly J. Stevens, Lauren Sullivan, Peter Wragg, Elizabeth T. Borer
2018, Ecology (99) 822-831
Plant stoichiometry, the relative concentration of elements, is a key regulator of ecosystem functioning and is also being altered by human activities. In this paper we sought to understand the global drivers of plant stoichiometry and compare the relative contribution of climatic vs. anthropogenic effects. We addressed this goal by...
Relating river discharge and water temperature to the recruitment of age‐0 White Sturgeon (Acipenser transmontanus Richardson, 1836) in the Columbia River using over‐dispersed catch data
Timothy D. Counihan, Colin G. Chapman
2018, Journal of Applied Ichthyology (34) 279-289
The goals were to (i) determine if river discharge and water temperature during various early life history stages were predictors of age‐0 White Sturgeon, Acipenser transmontanus, recruitment, and (ii) provide an example of how over‐dispersed catch data, including data with many zero observations, can be used to better understand the effects...
Biological and ecological science for Michigan—The Great Lakes State
Water Resources Division, U.S. Geological Survey
2018, Fact Sheet 2018-3012
Michigan is rich in lakes, rivers, dune and rocky shorelines, forests, fish and wildlife, and has the longest freshwater coastline in the United States, 3,224 miles. Many enterprises critical to Michigan’s economy and cultural heritage are based on natural resources including commercial and sport fishing, hunting, and other outdoor recreation....
N-mix for fish: estimating riverine salmonid habitat selection via N-mixture models
Nicholas A. Som, Russell W. Perry, Edward C. Jones, Kyle De Juilio, Paul Petros, William D. Pinnix, Derek L. Rupert
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 1048-1058
Models that formulate mathematical linkages between fish use and habitat characteristics are applied for many purposes. For riverine fish, these linkages are often cast as resource selection functions with variables including depth and velocity of water and distance to nearest cover. Ecologists are now recognizing the role that detection plays...
Distribution and seasonal differences in Pacific Lamprey and Lampetra spp eDNA across 18 Puget Sound watersheds
Carl O. Ostberg, Dorothy M. Chase, Michael C. Hayes, Jeffrey J. Duda
2018, PeerJ (6) 1-25
Lampreys have a worldwide distribution, are functionally important to ecological communities and serve significant roles in many cultures. In Pacific coast drainages of North America, lamprey populations have suffered large declines. However, lamprey population status and trends within many areas of this region are unknown and such information is needed...
Barrier-island and estuarine-wetland physical-change assessment after Hurricane Sandy
Nathaniel G. Plant, Kathryn E.L. Smith, Davina Passeri, Christopher G. Smith, Julie Bernier
2018, Open-File Report 2017-1157
IntroductionThe Nation’s eastern coast is fringed by beaches, dunes, barrier islands, wetlands, and bluffs. These natural coastal barriers provide critical benefits and services, and can mitigate the impact of storms, erosion, and sea-level rise on our coastal communities. Waves and storm surge resulting from Hurricane Sandy, which made landfall along...
Hydrologic assessment and numerical simulation of groundwater flow, San Juan Mine, San Juan County, New Mexico, 2010–13
Anne M. Stewart
2018, Scientific Investigations Report 2017-5155
Coal combustion byproducts (CCBs), which are composed of fly ash, bottom ash, and flue gas desulfurization material, produced at the coal-fired San Juan Generating Station (SJGS), located in San Juan County, New Mexico, have been buried in former surface-mine pits at the San Juan Mine, also referred to as the...
Disentangling the effects of low pH and metal mixture toxicity on macroinvertebrate diversity
Riccardo Fornaroli, Alessio Ippolito, Mari J. Tolkkinen, Heikki Mykra, Timo Muotka, Laurie S. Balistrieri, Travis S. Schmidt
2018, Environmental Pollution (235) 889-898
One of the primary goals of biological assessment of streams is to identify which of a suite of chemical stressors is limiting their ecological potential. Elevated metal concentrations in streams are often associated with low pH, yet the effects of these two potentially limiting factors of freshwater biodiversity are rarely...
The aerosphere as a network connector of organisms and their diseases
Jeremy D. Ross, Eli S. Bridge, Diann J. Prosser, John Y. Takekawa
2018, Book chapter, Aeroecology
Aeroecological processes, especially powered flight of animals, can rapidly connect biological communities across the globe. This can have profound consequences for evolutionary diversification, energy and nutrient transfers, and the spread of infectious diseases. The latter is of particular consequence for human populations, since migratory birds are known to host diseases...
An epidemiological model of virus transmission in salmonid fishes of the Columbia River Basin
Paige F. B. Ferguson, Rachel Breyta, Ilana L. Brito, Gael Kurath, Shannon L. LaDeau
2018, Ecological Modelling (377) 1-15
We have developed a dynamic epidemiological model informed by records of viral presence and genotypes to evaluate potential transmission routes maintaining a viral pathogen in economically and culturally important anadromous fish populations. In the Columbia River Basin, infectious hematopoietic necrosis virus (IHNV) causes severe disease, predominantly in juvenile steelhead trout...
On the sensitivity of annual streamflow to air temperature
Paul C.D. Milly, Jonghun Kam, Krista A. Dunne
2018, Water Resources Research (54) 2624-2641
Although interannual streamflow variability is primarily a result of precipitation variability, temperature also plays a role. The relative weakness of the temperature effect at the annual time scale hinders understanding, but may belie substantial importance on climatic time scales. Here we develop and evaluate a simple theory relating variations of...
Quantifying differences in responses of aquatic insects to trace metal exposure in field studies and short-term stream mesocosm experiments
Yuichi Iwasaki, Travis S. Schmidt, William H. Clements
2018, Environmental Science & Technology (52) 4378-4384
Characterizing macroinvertebrate taxa as either sensitive or tolerant is of critical importance for investigating impacts of anthropogenic stressors in aquatic ecosystems and for inferring causality. However, our understanding of relative sensitivity of aquatic insects to metals in the field and under controlled conditions in the laboratory or mesocosm experiments is...
Linking animals aloft with the terrestrial landscape
Jeffrey J. Buler, Wylie C. Barrow Jr., Matthew Boone, Deanna K. Dawson, Robert H. Diehl, Frank R. Moore, Lori A. Randall, Timothy Schreckengost, Jaclyn A. Smolinsky
2018, Book chapter, Aeroecology
Despite using the aerosphere for many facets of their life, most flying animals (i.e., birds, bats, some insects) are still bound to terrestrial habitats for resting, feeding, and reproduction. Comprehensive broad-scale observations by weather surveillance radars of animals as they leave terrestrial habitats for migration or feeding flights can be...
Data analysis considerations for pesticides determined by National Water Quality Laboratory schedule 2437
Megan E. Shoda, Lisa H. Nowell, Wesley W. Stone, Mark W. Sandstrom, Laura M. Bexfield
2018, Scientific Investigations Report 2018-5007
In 2013, the U.S. Geological Survey National Water Quality Laboratory (NWQL) made a new method available for the analysis of pesticides in filtered water samples: laboratory schedule 2437. Schedule 2437 is an improvement on previous analytical methods because it determines the concentrations of 225 fungicides, herbicides, insecticides, and associated degradates...
Evaluating micrometeorological estimates of groundwater discharge from Great Basin desert playas
Tracie Jackson, Keith J. Halford, Philip M. Gardner, Amanda Garcia
2018, Ground Water (56) 909-920
Groundwater availability studies in the arid southwestern United States traditionally have assumed that groundwater discharge by evapotranspiration (ETg) from desert playas is a significant component of the groundwater budget. However, desert playa ETg rates are poorly constrained by Bowen Ratio energy budget (BREB) and eddy-covariance (EC) micrometeorological measurement approaches. Best...
High frequency data exposes nonlinear seasonal controls on dissolved organic matter in a large watershed
Matthew Shultz, Brian A. Pellerin, George Aiken, Joseph W. Martin, Peter Raymond
2018, Environmental Science and Technology (52) 5644-5652
We analyzed a five year, high frequency time series generated by an in situ fluorescent dissolved organic matter (fDOM) sensor installed near the Connecticut River’s mouth, investigating high temporal resolution DOM dynamics in a larger watershed and longer time series than previously addressed. We identified a...