A summary of the late Cenozoic stratigraphic and tectonic history of the Santa Clara Valley, California
Victoria E. Langenheim, Robert C. Jachens, Carl M. Wentworth, Russell W. Graymer, Richard G. Stanley, Robert J. McLaughlin, Robert W. Simpson, Robert A. Williams, D. W. Andersen, David A. Ponce
2015, Geosphere (11) 50-62
The late Cenozoic stratigraphic and tectonic history of the Santa Clara Valley illustrates the dynamic nature of the North American–Pacific plate boundary and its effect on basin and landscape development. Prior to early Miocene time, the area that became Santa Clara Valley consisted of eroding Franciscan complex basement structurally interleaved...
Groundwater conditions in Utah, spring of 2015
Carole B. Burden
2015, Cooperative Investigations Report 56
This is the fifty-second in a series of annual reports that describe groundwater conditions in Utah. Reports in this series, published cooperatively by the U.S. Geological Survey and the Utah Department of Natural Resources, Division of Water Rights, and the Utah Department of Environmental Quality, Division of Water Quality, provide...
Oxic to anoxic transition in bottom waters during formation of the Citronen Fjord sediment-hosted Zn-Pb deposit, North Greenland
John F. Slack, Diogo Rosa, Hendrik Falck
2015, Conference Paper, 13th Biennial Meeting of the Society for Geology Applied to Mineral Deposits
Bulk geochemical data acquired for host sedimentary rocks to the Late Ordovician Citronen Fjord sediment-hosted Zn-Pb deposit in North Greenland constrain the redox state of bottom waters prior to and during sulphide mineralization. Downhole profiles for one drill core show trends for redox proxies (MnO, Mo, Ce anomalies) that suggest...
Potential role of acetyl-CoA synthetase (acs) and malate dehydrogenase (mae) in the evolution of the acetate switch in Bacteria and Archaea
Elliott P. Barnhart, Marcella A. McClure, Kiki Johnson, Sean Cleveland, Kristopher A. Hunt, Matthew W. Fields
2015, Scientific Reports (5) 1-10
Although many Archaea have AMP-Acs (acetyl-coenzyme A synthetase) and ADP-Acs, the extant methanogenic genus Methanosarcina is the only identified Archaeal genus that can utilize acetate via acetate kinase (Ack) and phosphotransacetylase (Pta). Despite the importance of ack as the potential urkinase in the ASKHA phosphotransferase superfamily, an origin hypothesis does...
Ground-based thermal imaging of stream surface temperatures: Technique and evaluation
Scott A. Bonar, Sally J. Petre
2015, North American Journal of Fisheries Management (35) 1209-1218
We evaluated a ground-based handheld thermal imaging system for measuring water temperatures using data from eight southwestern USA streams and rivers. We found handheld thermal imagers could provide considerably more spatial information on water temperature (for our unit one image = 19,600 individual temperature measurements) than traditional methods could supply...
2014 status of the Lake Ontario lower trophic levels
Kristen T. Holeck, Lars G. Rudstam, Christopher Hotaling, Russ D. McCullough, Dave Lemon, Web Pearsall, Jana Lantry, Michael J. Connerton, Steve LaPan, Zy Biesinger, Brian F. Lantry, Maureen Walsh, Brian Weidel
2015, NYSDEC Lake Ontario Annual Report 2014-16
Soluble reactive phosphorus (SRP) concentrations have been stable in nearshore and offshore habitats since 1998 (0.4 – 3.3 μg/L). SRP concentrations were low in 2014; Apr/May – Oct mean values were <1 μg/L at most sites. Spring TP concentrations at individual sites exceeded 10 μg/L on occasion, but spring means...
Climate change in the Northeast and Midwest United States
Alexander Bryan, Ambarish Karmalkar, Ethan Coffel, Liang Ning, Radley M. Horton, Eleonora Demaria, Fanxing Fan, Raymond S. Bradley, Richard Palmer
2015, Report, Integrating climate change into northeast and midwest State Wildlife Action Plans
The climate is changing rapidly in ways that have already impacted wildlife and their habitats. Here, we present a summary of the observed past and projected future climate changes in the region that are relevant to wildlife and ecosystems, as well as what we know and don’t know in order...
Shortnose sturgeon in the Gulf of Maine: Use of spawning habitat in the Kennebec System and response to dam removal
Gail S. Wippelhauser, Gayle B. Zydlewski, Micah Kieffer, James Sulikowski, Michael T. Kinnison
2015, Transactions of the American Fisheries Society (144) 742-752
Evidence has become available in this century indicating that populations of the endangered Shortnose Sturgeon Acipenser brevirostrum migrate outside their natal river systems, but the full extent and functional basis of these migrations are not well understood. Between 2007 and 2013, 40 Shortnose Sturgeon captured and tagged in four Gulf of Maine...
PESTools – A Python toolkit for processing PEST-related information
Evan Christianson, Andrew T. Leaf
2015, Conference Paper, MODFLOW and More 2015 Proceedings
PESTools is an open-source Python package for processing and visualizing information associated with the parameter estimation software PEST and PEST++. While PEST output can be reformatted for post- processing in spreadsheets or other menu-driven software packages, that approach can be error-prone and time-consuming. Managing information from highly parameterized models with thousands of parameters and...
Seafloor geomorphic manifestations of gas venting and shallow subbottom gas hydrate occurrences
C. K. Paull, D. W. Caress, Hans Thomas, Eve M. Lundsten, Kayce Anderson, Roberto Gwiazda, M Riedel, Mary McGann, J C Herguera
2015, Geosphere (11) 491-513
High-resolution multibeam bathymetry data collected with an autonomous underwater vehicle (AUV) complemented by compressed high-intensity radar pulse (Chirp) profiles and remotely operated vehicle (ROV) observations and sediment sampling reveal a distinctive rough topography associated with seafloor gas venting and/or near-subsurface gas hydrate accumulations. The surveys provide 1 m bathymetric grids...
Optimization techniques using MODFLOW-GWM
Anna Grava, Daniel T. Feinstein, Paul M. Barlow, Tullia Bonomi, Fabiola Buarne, Charles Dunning, Randall J. Hunt
2015, Conference Paper, MODFLOW and More 2015: Modeling a complex world
An important application of optimization codes such as MODFLOW-GWM is to maximize water supply from unconfined aquifers subject to constraints involving surface-water depletion and drawdown. In optimizing pumping for a fish hatchery in a bedrock aquifer system overlain by glacial deposits in eastern Wisconsin, various features of the GWM-2000 code...
Silvio O. Conte National Fish and Wildlife Refuge: Draft comprehensive conservation plan and environmental impact statement
U.S. Fish and Wildlife Service, Elizabeth Donovan, William Gascoigne, Catherine Cullinane Thomas
2015, Report
The Connecticut River is treasured by all for its majesty and significance in supporting life along its winding 410-mile passage through urban and rural communities in New Hampshire, Vermont, Massachusetts, and Connecticut. Working with our partners, we are inspired to protect and enhance the natural and cultural richness throughout the...
Duckling survival, fecundity, and habitat selection of mottled duck broods on the upper Texas Gulf Coast
Elizabeth A. Rigby, David A. Haukos
2015, Journal of the Southeastern Association of Fish and Wildlife Agencies (2) 156-163
Mottled ducks (Anas fulvigula) on the western Gulf Coast have exhibited a steep population decline since the mid 1990s. Low rates of breeding incidence and nest success have been implicated in this decline, but duckling survival and the habitat needs of broods have not been previously investigated in this region....
Application and utility of a low-cost unmanned aerial system to manage and conserve aquatic resources in four Texas rivers
Timothy W. Birdsong, Megan Bean, Timothy B. Grabowski, Thomas B. Hardy, Thomas Heard, Derrick Holdstock, Kristy Kollaus, Stephan J. Magnelia, Kristina Tolman
2015, Journal of the Southeastern Association of Fish and Wildlife Agencies (2015) 80-85
Low-cost unmanned aerial systems (UAS) have recently gained increasing attention in natural resources management due to their versatility and demonstrated utility in collection of high-resolution, temporally-specific geospatial data. This study applied low-cost UAS to support the geospatial data needs of aquatic resources management projects in four Texas rivers. Specifically,...
Observational changes to the natural flow regime in Lee Creek in relation to altered precipitation patterns and its implication for fishes
Michael R. Gatlin, James M. Long, Donald J. Turton
2015, Proceedings of the Oklahoma Academy of Science (95) 135-146
The natural flow regime is important for structuring streams and their resident ichthyofauna and alterations to this regime can have cascading consequences. We sought to determine if changes in hydrology could be attributed to changes in precipitation in a minimally altered watershed (Lee Creek). The stream flow regime was analyzed...
Hydrothermal, biogenic, and seawater components in metalliferous black shales of the Brooks Range, Alaska: Synsedimentary metal enrichment in a carbonate ramp setting
John F. Slack, David Selby, Julie A. Dumoulin
2015, Economic Geology (110) 653-675
Trace element and Os isotope data for Lisburne Group metalliferous black shales of Middle Mississippian (early Chesterian) age in the Brooks Range of northern Alaska suggest that metals were sourced chiefly from local seawater (including biogenic detritus) but also from externally derived hydrothermal fluids. These black shales are interbedded with...
Origins and bioavailability of dissolved organic matter in groundwater
Yuan Shen, Francis H. Chapelle, Eric W. Strom, Ronald Benner
2015, Biogeochemistry (122) 61-78
Dissolved organic matter (DOM) in groundwater influences water quality and fuels microbial metabolism, but its origins, bioavailability and chemical composition are poorly understood. The origins and concentrations of dissolved organic carbon (DOC) and bioavailable DOM were monitored during a long-term (2-year) study of groundwater in a fractured-rock aquifer in the...
Synoptic evaluation of scale-dependent metrics for hydrographic line feature geometry
Larry V. Stanislawski, Barbara P. Buttenfield, Paulo Raposo, Madeline Cameron, Jeff T. Falgout
2015, Conference Paper, 18th ICA Workshop on Generalisation and Multiple Representation
Methods of acquisition and feature simplification for vector feature data impact cartographic representations and scientific investigations of these data, and are therefore important considerations for geographic information science (Haunert and Sester 2008). After initial collection, linear features may be simplified to reduce excessive detail or to furnish a reduced-scale version...
Net ecosystem production and organic carbon balance of U.S. East Coast estuaries: A synthesis approach
Maria Herrmann, Raymond G. Najjar, W. Michael Kemp, Richard B. Alexander, Elizabeth W. Boyer, Wei-Jun Cai, Peter C. Griffith, Kevin D. Kroeger, S. Leigh McCallister, Richard A. Smith
2015, Global Biogeochemical Cycles (29) 96-111
Net ecosystem production (NEP) and the overall organic carbon budget for the estuaries along the East Coast of the United States are estimated. We focus on the open estuarine waters, excluding the fringing wetlands. We developed empirical models relating NEP to loading ratios of dissolved inorganic nitrogen to total organic...
Mottled duck (Anas fulvigula) movements in the Texas Chenier Plain Region
Jena A. Moon, David A. Haukos, Warren C. Conway
2015, Journal of the Southeastern Association of Fish and Wildlife Agencies (2) 255-267
As a surrogate species for Strategic Habitat Conservation, the mottled duck (Anas fulgivula) is an indicator species to coastal marsh health and function. Currently, biologists have a relatively poor understanding of regional mottled duck movements. We outfitted adult female mottled ducks with solar satellite transmitters during summer 2009–2011. Movement patterns...
Quality assurance testing of acoustic doppler current profiler transform matrices
Brandy Armstrong, Janice M. Fulford, Kirk G. Thibodeaux
2015, Conference Paper, 2015 IEEE/OES Eleveth Current, Waves and Turbulence Measurement (CWTM)
The U.S. Geological Survey (USGS) Hydrologic Instrumentation Facility (HIF) is nationally responsible for the design, testing, evaluation, repair, calibration, warehousing, and distribution of hydrologic instrumentation in use within the USGS Water Mission Area (WMA). The HIF's Hydraulic Laboratory has begun routine quality assurance (QA) testing and documenting the performance of...
Copper toxicity and organic matter: Resiliency of watersheds in the Duluth Complex, Minnesota, USA
Nadine M. Piatak, Robert R. Seal, Perry M. Jones, Laurel G. Woodruff
2015, Conference Paper, Proceedings of the 10th International Conference on Acid Rock Drainage and IMWA Annual Conference
We estimated copper (Cu) toxicity in surface water with high dissolved organic matter (DOM) for unmined mineralized watersheds of the Duluth Complex using the Biotic Ligand Model (BLM), which evaluates the effect of DOM, cation competition for biologic binding sites, and metal speciation. A sediment-based BLM was used to estimate...
Isotopic geochemistry of Panama rivers
Russell S. Harmon, Gerhard Worner, Michael J. Pribil, Zoltan Kern, Istvan Forizs, W. Berry Lyons, Christopher B. Gardner, Steven T. Goldsmith
2015, Procedia Earth and Planetary Science (13) 108-111
River water samples collected from 78 watersheds rivers along a 500-km transect across a Late Cretaceous-Tertiary andesitic volcanic arc terrane in west-central Panama provide a synoptic overview of riverine geochemistry, chemical denudation, and CO2 consumption in the tropics. D/H and 18O/16O relationships indicate that bedrock dissolution of andesitic arc crust...
Astronomical observations of volatiles on asteroids
Andrew S. Rivkin, Humberto Campins, Joshua P. Emery, Ellen S. Howell, Javier Licandro, Driss Takir, Faith Vilas
Patrick Michel, Francesca E. DeMeo, William F. Bottke Jr., editor(s)
2015, Book chapter, Asteroids IV
We have long known that water and hydroxyl are important components in meteorites and asteroids. However, in the time since the publication of Asteroids III, evolution of astronomical instrumentation, laboratory capabilities, and theoretical models have led to great advances in our understanding of H2O/OH on small bodies, and spacecraft observations...
Vegetation composition, nutrient, and sediment dynamics along a floodplain landscape
Nancy B. Rybicki, Gregory E. Noe, Cliff R. Hupp, Myles Robinson
2015, River Systems (21) 109-123
Forested floodplains are important landscape features for retaining river nutrients and sediment loads but there is uncertainty in how vegetation influences nutrient and sediment retention. In order to understand the role of vegetation in nutrient and sediment trapping, we quantified species composition and the uptake of nutrients in plant material...