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Aquatic Trophic Productivity model: A decision support model for river restoration planning in the Methow River, Washington
Joseph R. Benjamin, J. Ryan Bellmore
2016, Open-File Report 2016-1075
Introduction The U.S. Geological Survey (USGS) has developed a dynamic food-web simulation model to provide decision support for Bureau of Reclamation (Reclamation) river restoration projects in the Methow River, Washington. This modeling effort was done to contribute to Reasonable and Prudent Alternative actions 56 and 57of the 2014 Federal Columbia River...
Not all droughts are created equal: The impacts of interannual drought pattern and magnitude on grassland carbon cycling
David L. Hoover, Brendan M. Rogers
2016, Global Change Biology (22) 1809-1820
Climate extremes, such as drought, may have immediate and potentially prolonged effects on carbon cycling. Grasslands store approximately one-third of all terrestrial carbon and may become carbon sources during droughts. However, the magnitude and duration of drought-induced disruptions to the carbon cycle, as well as the mechanisms responsible, remain poorly...
Use of mussel casts from archaeological sites as paleoecological indicators: An example from CA-MRN-254, Marin County, Alta California
Mary McGann, Scott W. Starratt, Charles L. Powell II, David G Bieling
2016, California Archaeology (8) 63-90
Archaeological investigations at prehistoric site CA-MRN-254 at the Dominican University of California in Marin County, California, revealed evidence of Native American occupation spanning the past 1,800 years. A dominant source of food for the inhabitants in the San Francisco Bay area was the intertidal, quiet-water dwelling blue mussel (Mytilus trossulus),...
Simulation of deep ventilation in Crater Lake, Oregon, 1951–2099
Tamara M. Wood, Susan A. Wherry, Sebastiano Piccolroaz, Scott F Girdner
2016, Scientific Investigations Report 2016-5046
The frequency of deep ventilation events in Crater Lake, a caldera lake in the Oregon Cascade Mountains, was simulated in six future climate scenarios, using a 1-dimensional deep ventilation model (1DDV) that was developed to simulate the ventilation of deep water initiated by reverse stratification and subsequent thermobaric instability. The...
Practical bias correction in aerial surveys of large mammals: Validation of hybrid double-observer with sightability method against known abundance of feral horse (Equus caballus) populations
Bruce C. Lubow, Jason I. Ransom
Kathryn A. Schoenecker, editor(s)
2016, PLoS ONE (11)
Reliably estimating wildlife abundance is fundamental to effective management. Aerial surveys are one of the only spatially robust tools for estimating large mammal populations, but statistical sampling methods are required to address detection biases that affect accuracy and precision of the estimates. Although various methods for correcting aerial survey bias...
Timing and composition of continental volcanism at Harrat Hutaymah, western Saudi Arabia
Robert A. Duncan, Adam J R Kent, Carl Thornber, Tyler D Schliedler, Abdullah M Al-Amri
2016, Journal of Volcanology and Geothermal Research (313) 1-14
Harrat Hutaymah is an alkali basalt volcanic field in north-central Saudi Arabia, at the eastern margin of a large Neogene continental, intraplate magmatic province. Lava flow, tephra and spatter cone compositions in the field include alkali olivine basalts and basanites. These compositions contrast with the predominantly tholeiitic, fissure-fed basalts found...
Coesite in suevites from the Chesapeake Bay impact structure
John C. Jackson, J. Wright Horton Jr., I-Ming Chou, Harvey E. Belkin
2016, Meteoritics and Planetary Science (51) 946-965
The occurrence of coesite in suevites from the Chesapeake Bay impact structure is confirmed within a variety of textural domains in situ by Raman spectroscopy for the first time and in mechanically separated grains by X-ray diffraction. Microtextures of coesite identified in situ investigated under transmitted light and by scanning electron microscope...
Demographic outcomes of diverse migration strategies assessed in a metapopulation of tundra swans
Craig R. Ely, Brandt W. Meixell
2016, Movement Ecology (4)
Background Migration is a prominent aspect of the life history of many avian species, but the demographic consequences of variable migration strategies have only infrequently been investigated, and rarely when using modern technological and analytical methods for assessing survival, movement patterns, and long-term productivity in the context of life history theory....
Organic petrology and geochemistry of Eocene Suzak bituminous marl, north-central Afghanistan: Depositional environment and source rock potential
Paul C. Hackley, John Sanfilipo
2016, Marine and Petroleum Geology (73) 572-589
Organic geochemistry and petrology of Eocene Suzak bituminous marl outcrop samples from Madr village in north-central Afghanistan were characterized via an integrated analytical approach to evaluate depositional environment and source rock potential. Multiple proxies suggest the organic-rich (TOC ∼6 wt.%) bituminous marls are ‘immature’ for oil generation (e.g., vitrinite Ro < 0.4%, Tmax < 425 °C,...
The structure of genetic diversity in eelgrass (Zostera marina L.) along the North Pacific and Bering Sea coasts of Alaska
Sandra L. Talbot, George K. Sage, Jolene R. Rearick, Megan C. Fowler, Raquel Muñiz-Salazar, Bethany Baibak, Sandy Wyllie-Echeverria, Alehandro Cabello-Pasini, David H. Ward
2016, PLoS ONE (11)
Eelgrass (Zostera marina) populations occupying coastal waters of Alaska are separated by a peninsula and island archipelago into two Large Marine Ecosystems (LMEs). From populations in both LMEs, we characterize genetic diversity, population structure, and polarity in gene flow using nuclear microsatellite fragment and chloroplast and nuclear sequence data. An...
Role of habitat complexity in predator-prey dynamics between an introduced fish and larval Long-toed Salamanders (Ambystoma macrodactylum)
Erin K Kenison, Andrea R. Litt, David S. Pilliod, Tom E McMahon
2016, Canadian Journal of Zoology (94) 243-249
Predation by nonnative fishes has reduced abundance and increased extinction risk for amphibian populations worldwide. Although rare, fish and palatable amphibians have been observed to coexist where aquatic vegetation and structural complexity provide suitable refugia. We examined whether larval long-toed salamanders (Ambystoma macrodactylum Baird, 1849) increased use of vegetation cover...
The Chahnaly low sulfidation epithermal gold deposit, western Makran volcanic arc, southeastern Iran
Ali Sholeh, Ebrahim Rastad, David L. Huston, J. Bruce Gemmell, Ryan D. Taylor
2016, Economic Geology (111) 619-639
The Chahnaly low-sulfidation epithermal Au deposit and nearby Au prospects are located northwest of the intermittently active Bazman stratovolcano on the western end of the Makran volcanic arc, which formed as the result of subduction of the remnant Neo-Tethyan oceanic crust beneath the Lut block. The arc hosts the...
From "Duck Factory" to "Fish Factory": Climate induced changes in vertebrate communities of prairie pothole wetlands and small lakes
Kyle I. McLean, David M. Mushet, Craig A. Stockwell
2016, Wetlands (36) 407-421
The Prairie Pothole Region’s myriad wetlands and small lakes contribute to its stature as the “duck factory” of North America. The fishless nature of the region’s aquatic habitats, a result of frequent drying, freezing, and high salinity, influences its importance to waterfowl. Recent precipitation increases have resulted in higher water...
Movement and survival of an amphibian in relation to sediment and culvert design
R.K Honeycutt, W.H. Lowe, Blake R. Hossack
2016, Journal of Wildlife Management (80) 761-770
Habitat disturbance from stream culverts can affect aquatic organisms by increasing sedimentation or forming barriers to movement. Land managers are replacing many culverts to reduce these negative effects, primarily for stream fishes. However, these management actions are likely to have broad implications for many organisms, including amphibians in small streams....
Airborne pathogens from dairy manure aerial irrigation and the human health risk
Mark A. Borchardt, Tucker R Burch
2016, Report, Considerations for the use of manure irrigation practices
Dairy manure, like the fecal excrement from any domesticated or wild animal, can contain pathogens capable of infecting humans and causing illness or even death. Pathogens in dairy manure can be broadly divided into categories of taxonomy or infectiousness. Dividing by taxonomy there are three pathogen groups in dairy manure:...
Temporal, geographic, and host distribution of avian paramyxovirus 1 (Newcastle disease virus)
Kiril M. Dimitrov, Andrew M. Ramey, Xueting Qiu, Justin Bahl, Claudio L. Afonso
2016, Infection, Genetics and Evolution (39) 22-34
Newcastle disease is caused by virulent forms of avian paramyxovirus of serotype 1 (APMV-1) and has global economic importance. The disease reached panzootic proportions within two decades after first being identified in 1926 in the United Kingdom and Indonesia and still remains endemic in many countries across the world. Here...
DNA and dispersal models highlight constrained connectivity in a migratory marine megavertebrate
Eugenia Naro-Maciel, Kristen M. Hart, Rossana Cruciata, Nathan Freeman Putman
2016, Ecography (40) 586-597
Population structure and spatial distribution are fundamentally important fields within ecology, evolution, and conservation biology. To investigate pan-Atlantic connectivity of globally endangered green turtles (Chelonia mydas) from two National Parks in Florida, USA, we applied a multidisciplinary approach comparing genetic analysis and ocean circulation modeling. The Everglades (EP) is a...
Critical elements in sediment-hosted deposits (clastic-dominated Zn-Pb-Ag, Mississippi Valley-type Zn-Pb, sedimentary rock-hosted Stratiform Cu, and carbonate-hosted Polymetallic Deposits): A review: Chapter 12
Erin E. Marsh, Murray W. Hitzman, David L. Leach
2016, Book chapter, Rare earth and critical elements in ore deposits: Reviews in Economic Geology Vol. 18
Some sediment-hosted base metal deposits, specifically the clastic-dominated (CD) Zn-Pb deposits, carbonate-hosted Mississippi Valley-type (MVT) deposits, sedimentary-rock hosted stratiform copper deposits, and carbonate-hosted polymetallic (“Kipushi type”) deposits, are or have been important sources of critical elements including Co, Ga, Ge, and Re. The generally poor data concerning trace element...
Building the team for team science
Emily K. Read, M. O’Rourke, G. S. Hong, P. C. Hanson, Luke A. Winslow, S. Crowley, C. A. Brewer, K. C. Weathers
2016, Ecosphere (7)
The ability to effectively exchange information and develop trusting, collaborative relationships across disciplinary boundaries is essential for 21st century scientists charged with solving complex and large-scale societal and environmental challenges, yet these communication skills are rarely taught. Here, we describe an adaptable training program designed to increase the capacity of...
Coherent late-Holocene climate-driven shifts in the structure of three Rocky Mountain lakes
Jeffery R. Stone, Jasmine E. Saros, Gregory T. Pederson
2016, The Holocene (26) 1103-1111
Large-scale atmospheric pressure centers, such as the Aleutian and Icelandic Low, have a demonstrated relationship with physical lake characteristics in contemporary monitoring studies, but the responses to these phenomena are rarely observed in lake records. We observe coherent changes in the stratification patterns of three deep (>30 m) lakes inferred from...
Paleozoic magmatism and porphyry Cu-mineralization in an evolving tectonic setting in the North Qilian Orogenic Belt, NW China
Kun-Feng Qiu, Jun Deng, Ryan D. Taylor, Kai-Rui Song, Yao-Hui Song, Quan-Zhong Li, Richard J. Goldfarb
2016, Journal of Asian Earth Sciences (122) 20-40
The NWW-striking North Qilian Orogenic Belt records the Paleozoic accretion–collision processes in NW China, and hosts Paleozoic Cu–Pb–Zn mineralization that was temporally and spatially related to the closure of the Paleo Qilian-Qinling Ocean. The Wangdian Cu deposit is located in the eastern part of the North Qilian Orogenic Belt, NW...
Ecology, distribution, and predictive occurrence modeling of Palmers chipmunk (Tamias palmeri): a high-elevation small mammal endemic to the Spring Mountains in southern Nevada, USA
Chris E. Lowrey, Kathleen M. Longshore, Brett R. Riddle, Stacy Mantooth
2016, Journal of Mammalogy (97) 1033-1043
Although montane sky islands surrounded by desert scrub and shrub steppe comprise a large part of the biological diversity of the Basin and Range Province of southwestern North America, comprehensive ecological and population demographic studies for high-elevation small mammals within these areas are rare. Here, we examine the ecology and...
Application of lime (CaCO3) to promote forest recovery from severe acidification increases potential for earthworm invasion
Caitlin Homan, Colin M Beirer, Timothy S McCay, Gregory B. Lawrence
2016, Forest Ecology and Management (368) 39-44
The application of lime (calcium carbonate) may be a cost-effective strategy to promote forest ecosystem recovery from acid impairment, under contemporary low levels of acidic deposition. However, liming acidified soils may create more suitable habitat for invasive earthworms that cause significant damage to forest floor communities and may disrupt ecosystem...
The role of competition – colonization tradeoffs and spatial heterogeneity in promoting trematode coexistence
Erin A. Mordecai, Alejandra G. Jaramillo, Jacob E. Ashford, Ryan F. Hechinger, Kevin D. Lafferty
2016, Ecology (97) 1484-1496
Competition – colonization tradeoffs occur in many systems, and theory predicts that they can strongly promote species coexistence. However, there is little empirical evidence that observed competition – colonization tradeoffs are strong enough to maintain diversity in natural systems. This is due in part to a mismatch between theoretical assumptions...
Groundwater quality, age, and susceptibility and vulnerability to nitrate contamination with linkages to land use and groundwater flow, Upper Black Squirrel Creek Basin, Colorado, 2013
Tristan P. Wellman, Michael G. Rupert
2016, Scientific Investigations Report 2016-5020
The Upper Black Squirrel Creek Basin is located about 25 kilometers east of Colorado Springs, Colorado. The primary aquifer is a productive section of unconsolidated deposits that overlies bedrock units of the Denver Basin and is a critical resource for local water needs, including irrigation, domestic, and commercial use. The...